Metagenome / Metatranscriptome Family F051517

Basic Information
Family ID	F051517
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	51 residues
Representative Sequence	GLDALLERTARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPAVRAR
Number of Associated Samples	124
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	67.36 %
% of genes from short scaffolds (< 2000 bps)	68.06 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Most Common Taxonomy
Group	Bacteria (64.583 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.972 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.25% β-sheet: 23.75% Coil/Unstructured: 60.00%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.32.1.6: Hypothetical protein BC1747	d1ss4a1	1ss4	0.73528
d.32.1.0: automated matches	d3hdpa_	3hdp	0.72356
d.32.1.0: automated matches	d3oa4a1	3oa4	0.71445
d.32.1.0: automated matches	d6wfia_	6wfi	0.69854
d.32.1.0: automated matches	d3gm5a1	3gm5	0.68799

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00884	Sulfatase	9.72
PF00753	Lactamase_B	8.33
PF11154	DUF2934	7.64
PF12681	Glyoxalase_2	4.17
PF12695	Abhydrolase_5	2.08
PF05163	DinB	2.08
PF04519	Bactofilin	2.08
PF13649	Methyltransf_25	1.39
PF13577	SnoaL_4	1.39
PF13360	PQQ_2	1.39
PF00135	COesterase	1.39
PF07859	Abhydrolase_3	1.39
PF07519	Tannase	0.69
PF00126	HTH_1	0.69
PF01327	Pep_deformylase	0.69
PF07883	Cupin_2	0.69
PF01872	RibD_C	0.69
PF01914	MarC	0.69
PF12740	Chlorophyllase2	0.69
PF13229	Beta_helix	0.69
PF00593	TonB_dep_Rec	0.69
PF07876	Dabb	0.69
PF07969	Amidohydro_3	0.69
PF01361	Tautomerase	0.69
PF00117	GATase	0.69
PF00486	Trans_reg_C	0.69
PF13472	Lipase_GDSL_2	0.69
PF11578	DUF3237	0.69
PF00149	Metallophos	0.69
PF00756	Esterase	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	2.08
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.08
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.39
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	1.39
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.69
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.69
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.69
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.58 %
Unclassified	root	N/A	35.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.58 %
Unclassified	root	N/A	35.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.58 %
Unclassified	root	N/A	35.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.78 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.39 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.42 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	5.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.08 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.39 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.08 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.39 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.08 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.39 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.08 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.39 %
Terrabacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Terrabacter	0.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT02H6WVP	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300000178\|FW301_c1041254	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300000891\|JGI10214J12806_10710778	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300001686\|C688J18823_10942520	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300004021\|Ga0055449_10301441	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300004156\|Ga0062589_100595384	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300004266\|Ga0055457_10097216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	787	Open in IMG/M
3300004463\|Ga0063356_106013441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	520	Open in IMG/M
3300004643\|Ga0062591_100802926	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005093\|Ga0062594_100503406	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300005338\|Ga0068868_101757049	Not Available	585	Open in IMG/M
3300005341\|Ga0070691_10276616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300005354\|Ga0070675_100301651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1411	Open in IMG/M
3300005364\|Ga0070673_100834129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300005365\|Ga0070688_100720880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300005438\|Ga0070701_10183447	All Organisms → cellular organisms → Bacteria → Acidobacteria	1227	Open in IMG/M
3300005459\|Ga0068867_101624496	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005543\|Ga0070672_100132375	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300005618\|Ga0068864_100940819	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300006163\|Ga0070715_10145124	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300006196\|Ga0075422_10121984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300006358\|Ga0068871_100547463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1048	Open in IMG/M
3300006604\|Ga0074060_11991695	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006871\|Ga0075434_101861267	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300007004\|Ga0079218_10250446	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300009156\|Ga0111538_10314830	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300009156\|Ga0111538_11801006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	771	Open in IMG/M
3300009174\|Ga0105241_12096285	Not Available	559	Open in IMG/M
3300009177\|Ga0105248_10347214	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300009445\|Ga0115553_1203044	Not Available	790	Open in IMG/M
3300009527\|Ga0114942_1107626	All Organisms → cellular organisms → Bacteria → Proteobacteria	930	Open in IMG/M
3300010359\|Ga0126376_13095241	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010373\|Ga0134128_12648676	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010396\|Ga0134126_11341750	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300010403\|Ga0134123_10689092	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300011428\|Ga0137456_1045068	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300011442\|Ga0137437_1135644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300012212\|Ga0150985_104522802	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300012232\|Ga0137435_1102255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300012492\|Ga0157335_1037467	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012897\|Ga0157285_10373032	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012901\|Ga0157288_10217850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	620	Open in IMG/M
3300012916\|Ga0157310_10139579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300012985\|Ga0164308_11004546	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300013306\|Ga0163162_10149954	All Organisms → cellular organisms → Bacteria	2449	Open in IMG/M
3300013306\|Ga0163162_10356809	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300013306\|Ga0163162_13001141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	542	Open in IMG/M
3300013308\|Ga0157375_10517394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Terrabacter	1357	Open in IMG/M
3300014299\|Ga0075303_1140035	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300014304\|Ga0075340_1081625	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	621	Open in IMG/M
3300014315\|Ga0075350_1172886	Not Available	557	Open in IMG/M
3300014324\|Ga0075352_1021684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1347	Open in IMG/M
3300014325\|Ga0163163_11688951	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300014325\|Ga0163163_12734170	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	550	Open in IMG/M
3300015077\|Ga0173483_10919678	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300015200\|Ga0173480_10758665	Not Available	615	Open in IMG/M
3300015200\|Ga0173480_11211275	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300015373\|Ga0132257_104501008	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300017792\|Ga0163161_11830856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	540	Open in IMG/M
3300017969\|Ga0181585_10041551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	3635	Open in IMG/M
3300018028\|Ga0184608_10437014	Not Available	565	Open in IMG/M
3300018469\|Ga0190270_10381992	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300018469\|Ga0190270_11584266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300018476\|Ga0190274_10922391	All Organisms → cellular organisms → Bacteria → Acidobacteria	942	Open in IMG/M
3300018481\|Ga0190271_11366149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	828	Open in IMG/M
3300020147\|Ga0196976_1074660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300020188\|Ga0181605_10418098	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300020194\|Ga0181597_10114538	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300021964\|Ga0222719_10343259	Not Available	950	Open in IMG/M
3300022937\|Ga0255770_10105728	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300023180\|Ga0255768_10455447	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300023273\|Ga0255763_1111296	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300024246\|Ga0247680_1035313	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300025550\|Ga0210098_1035419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	787	Open in IMG/M
3300025922\|Ga0207646_10425554	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300025923\|Ga0207681_10194692	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M
3300025937\|Ga0207669_10038338	All Organisms → cellular organisms → Bacteria → Proteobacteria	2758	Open in IMG/M
3300025940\|Ga0207691_10710562	Not Available	847	Open in IMG/M
3300025986\|Ga0207658_12123832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	510	Open in IMG/M
3300026035\|Ga0207703_10358271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1345	Open in IMG/M
3300026089\|Ga0207648_11162578	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300027880\|Ga0209481_10277894	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300028587\|Ga0247828_10635387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	656	Open in IMG/M
3300028812\|Ga0247825_10614397	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300030336\|Ga0247826_10970743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	674	Open in IMG/M
3300031170\|Ga0307498_10485352	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300031198\|Ga0307500_10014228	All Organisms → cellular organisms → Bacteria → Acidobacteria	1655	Open in IMG/M
3300031226\|Ga0307497_10247347	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300031226\|Ga0307497_10286318	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031226\|Ga0307497_10304173	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300031239\|Ga0265328_10187237	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300031538\|Ga0310888_10400429	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300031679\|Ga0318561_10726078	Not Available	546	Open in IMG/M
3300031940\|Ga0310901_10240017	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031943\|Ga0310885_10724195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300032017\|Ga0310899_10051281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1512	Open in IMG/M
3300032211\|Ga0310896_10195396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300032955\|Ga0335076_10738708	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300033433\|Ga0326726_10581059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1076	Open in IMG/M
3300033550\|Ga0247829_11388008	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300033551\|Ga0247830_11117698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	629	Open in IMG/M
3300034664\|Ga0314786_054843	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.06%
Host-Associated	Host-Associated	31.25%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.86%
Plants	Host-Associated → Plants	31.25%
Aquatic	Environmental → Aquatic	13.19%
Solid Waste	Engineered → Solid Waste	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.58%
Marine	Environmental → Aquatic → Marine	7.64%
Sediment	Environmental → Aquatic → Sediment	4.17%
Roots	Host-Associated → Plants → Roots	2.08%
Freshwater	Environmental → Aquatic → Freshwater	1.39%
Peat	Environmental → Terrestrial → Peat	1.39%
Grass	Engineered → Solid Waste → Grass	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.19%
Loam	Environmental → Terrestrial → Soil → Loam	9.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.17%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.08%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.08%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.69%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.69%
Sand	Environmental → Terrestrial → Soil → Sand	0.69%
Composting	Engineered → Solid Waste → Grass → Composting	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.19%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.56%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.17%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.08%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.08%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.39%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.69%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.69%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.11%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.86%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	4.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.47%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.47%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.78%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.08%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.08%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.08%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.39%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.39%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.69%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.69%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.69%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000178	Pristine groundwater from Oak Ridge Integrated Field Research Center, Tennessee (resequenced)	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004021	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004266	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025550	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_00573750	2170459016	Switchgrass, Maize And Mischanthus Litter	WTPSIESTKSAGVSLPQRRAKPIQRAFGRFVFAIDPDGVLVEFVERAAR
FW301_10412542	3300000178	Groundwater	VSGLDALIDRTKSAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPVAAAR*
JGI11643J12802_106640312	3300000890	Soil	LDRTARAGYRFLSVGATPIQRPFGRFVFAIDPDGILVEFVEPAVR*
JGI11643J12802_119132721	3300000890	Soil	LDRTARAGYRFLSVGATPIRRPFGRFVFAIDPDGILVEFVEPAVR*
JGI10214J12806_107107781	3300000891	Soil	QFQLEVAGLDALLERTARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPAARVR*
C688J18823_109425201	3300001686	Soil	TGLDTLIDRTKNAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPFR*
Ga0055449_103014412	3300004021	Natural And Restored Wetlands	EVDGLDALIEQTREAGYRFLSVDAKPIQRPFGRFVFAIDPDSVLVEFAEPNGDRNGRRGRR*
Ga0062593_1007996502	3300004114	Soil	RAAGYRFLSVGGRPIQRPFGRFVFLLDADNILVEYAEPAAGR*
Ga0063455_1013902591	3300004153	Soil	RTQSAGYRFLSSGAKPIQRPFGRFVFAIGPEAELVEYVEAR*
Ga0062589_1005953842	3300004156	Soil	PQFQLEVAGLDALLERTARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPTANVR
Ga0062589_1019438492	3300004156	Soil	RTARAGYRFLSVGATPIRRPFGRFVFAIDPDGILVEFVEPAVR*
Ga0055457_100972162	3300004266	Natural And Restored Wetlands	DALLVRTRDAGHGFLSVEGRPIQRPFGRFVFAQDPDNVLVEFVEPEGVRP*
Ga0063356_1060134412	3300004463	Arabidopsis Thaliana Rhizosphere	EVRGLDDLIERTRAAGYRFLSVGARPIQRPFGRFVFATDADSILVEYAEPAPGN*
Ga0062591_1008029261	3300004643	Soil	GAPQFQLEVSALDALLERTTRAGYRFVSTGAKPIQRPFGRFVFAIDPDGILVEFVERATSAP*
Ga0062594_1005034061	3300005093	Soil	EVSALDALLERTTRAGYRFVSTGAKPIQRPFGRFVFAIDPDGILVEFVERATSAP*
Ga0070680_1005497333	3300005336	Corn Rhizosphere	AAGYRFLSVGARPIQRPFGRFVFAIDSDGILVEYAEPAASR*
Ga0068868_1017570492	3300005338	Miscanthus Rhizosphere	QFQLEVSRLDALIDRTKHAGYRFLSVGAKPIQRAFGRFVFAIDPDAVFVEFVEPTAR*
Ga0070691_102766161	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	QVAGLDALMARTAQAGYRFLSVGGKPIQRPFGRFVFAIDPDGVLVEFVEPAKETR*
Ga0070675_1003016513	3300005354	Miscanthus Rhizosphere	IERTTRAGYRFLSVGAKPIQRPFGRFVFAIDPDGVLVEFVEPASRAPIQ*
Ga0070673_1008341292	3300005364	Switchgrass Rhizosphere	QLEVAGLDALIERTTRAGYRFLSVGGKPIQRPFGRFVFAIDPDGVLVEFVEPASRAPNQ*
Ga0070688_1007208802	3300005365	Switchgrass Rhizosphere	SPQFQLEVSGLDALIERTKSAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAAR*
Ga0070701_101834471	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VGAPQFQLEVAGLDALLERTARAGYRFLSVNAEPIQRPFGRFVFAIDPDSILVEFVEPSTRAR*
Ga0070705_1016719963	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ARAAGYRFLSVGARPIQRPFGRFVFAIDRDGVLVEYVEPASPP*
Ga0070700_1005841232	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	GLDGLLERARTAGYRFLSVGARPIQRPFGRFVFLLDADNILVEYAEPAAGR*
Ga0068867_1016244962	3300005459	Miscanthus Rhizosphere	KNAGYRFLSVGAKPIQRAFGRFVFAIDPDGVLVEFVEPAASAR*
Ga0070672_1001323751	3300005543	Miscanthus Rhizosphere	ALIDRTKNAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAAGVR*
Ga0070686_1010205752	3300005544	Switchgrass Rhizosphere	EAGYRFLSIGARPIQRAFGRFVFAIDPDGVLVEYVAPAPPR*
Ga0068864_1009408191	3300005618	Switchgrass Rhizosphere	QFQLEVAGLDALLERTARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPTANVR*
Ga0068861_1016167771	3300005719	Switchgrass Rhizosphere	KRAGYRFLSVRATPIQWAFGRFVLTIDPDAVLVEFVEPAASAP*
Ga0068858_1018605742	3300005842	Switchgrass Rhizosphere	RTKSAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPATGPR*
Ga0070715_101451241	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VSGLDALIDRTKRAGYRFLSVGRKPIQRAFGRFVFAIDPDAVLVEFVEPAGRGR*
Ga0075422_101219841	3300006196	Populus Rhizosphere	PQFQLEVAGLDALLERTARAGYRFLSVGGEPIQRPFGRFVFAIDPDGILVEFVEPSTRAQ
Ga0075422_102177791	3300006196	Populus Rhizosphere	RTKAAGYRFLSVGARPIQRPFGRFVFVADADNILVEYAEPAAGR*
Ga0068871_1005474631	3300006358	Miscanthus Rhizosphere	MARTTQSGYRFLSVGGKPIQRPFGRFVFAIDPDSVLVEFVEPAGRAPTQ*
Ga0074060_119916952	3300006604	Soil	QDVGSPQFQLEVSGLDALIDRTKNAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPGH*
Ga0075434_1018612672	3300006871	Populus Rhizosphere	QLQIQDLDVLIARTQSAGYRFLSAGSKPIQRPFGRFVFAIGPDRELVEYVEPAAPR*
Ga0075429_1002108691	3300006880	Populus Rhizosphere	TKRAGYRFVSVGAKPIQRPFGRFVFAIDHDGILVEFVERATSAR*
Ga0068865_1010901202	3300006881	Miscanthus Rhizosphere	LLERARTAGYRFLSVGARPIQRPFGRFVFLLDADNILVEYAEPAAGR*
Ga0079218_102504462	3300007004	Agricultural Soil	FQLEVAGLDALLERTARAGYRFLSVGAKPIQRPFGRFVFVIDPDGILVEFVEPAVRAR*
Ga0111538_103148301	3300009156	Populus Rhizosphere	VGAPQFQLQVAGLDALMARTTSAGYRFLSVGGKPIQRPFGRFVFAIDPDGVFVEFVEPR*
Ga0111538_118010061	3300009156	Populus Rhizosphere	LEVAGLDALIERTTRAGYRFLSVGRKPIQRPFGRFVFAIDPDGVLVEFVEPAGRAPNQ*
Ga0105241_120962852	3300009174	Corn Rhizosphere	GLDALLERTARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPAVRAR*
Ga0105248_103472144	3300009177	Switchgrass Rhizosphere	VSGLDALIDRTKNAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAAGGR*
Ga0115553_12030441	3300009445	Pelagic Marine	DAFIELTLDAGYEFLSWDAEPIQRNFGRFVFAIDPDGVLVEYVEPTIQN*
Ga0114942_11076261	3300009527	Groundwater	DALVERTRGAGYGFLSVGARPIQRPFGRFVFAIDADSILVEYAEPSTAR*
Ga0105340_11717241	3300009610	Soil	MARTTQAGYRFLSVGGKPIQRPFGRFVFAIDPDGVLVEFVEPR*
Ga0126376_130952412	3300010359	Tropical Forest Soil	RTKNARYRFLSVGAKPIQRAFGRFVFAIDPDSVLVEFVEPTKATR*
Ga0134128_126486762	3300010373	Terrestrial Soil	LQLEVRGMDALIERTRNAGYRFLSVGAKPIQRAFGRFVFAVDPDGVLVEFVERAPA*
Ga0134126_113417502	3300010396	Terrestrial Soil	VSAIDLLIERTKSAGYRFLSVGAKPIQRAFGRFVFAIDPDGVLVEFVERAAR*
Ga0134123_106890923	3300010403	Terrestrial Soil	EVRGIDALIERTRAAGYRFLSVGARPIQRPFGRFVFVLDADGILVEYAEPAASR*
Ga0137456_10450683	3300011428	Soil	GLDALLERTKDAGYRFLSVGAKPIQRPFGRFVFAIDPDGVLVEFVEPAATN*
Ga0137437_11356441	3300011442	Soil	GLDALLERTARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPAVRVR*
Ga0150985_1045228023	3300012212	Avena Fatua Rhizosphere	HDLDALMGRTRSAGYRFLSNGATPIQRPFGRFVFAIDPEGELIEYVEPR*
Ga0137435_11022551	3300012232	Soil	DALLERTARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPAVRVR*
Ga0150984_1134336581	3300012469	Avena Fatua Rhizosphere	HAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAASAR*
Ga0157335_10374672	3300012492	Arabidopsis Rhizosphere	DALLERTARAGYRFLSVGGEPIQRPFGRFVFAIDPDGILVEFVEPSTRAQ*
Ga0157285_103730321	3300012897	Soil	ALLDRTARAGYRFLSVGATPIRRPFGRFVFAIDPDGILVEFVEPAVR*
Ga0157288_102178502	3300012901	Soil	MARTTQAGYRFLSVGGKPIQRPFGRFVFAIDPDGVLVEFVEPAKETR*
Ga0157298_100254782	3300012913	Soil	AAGYRFLSVGGRPIQRPFGRFVFLLDADNILVEYAEPAAGR*
Ga0157310_101395792	3300012916	Soil	FQLEVAGLDALLDRTARAGYRFLSVGATPIRRPFGRFVFAIDPDGVLVEFVEPSTRAQ*
Ga0157310_102325211	3300012916	Soil	RAAGYRFLSVGARPIQRPFGRFVFVADADNILVEYAEPAAGR*
Ga0164308_110045462	3300012985	Soil	QLQLEVRDPEPLIERTRAAGYRFLSVGAKPIQRPFGRFVFAIGPDAELVEYVEPN*
Ga0163162_101499543	3300013306	Switchgrass Rhizosphere	ALIDRTKRAGYRFLSVDARPIQRAFGRFVFAIDPDGVLVEYVEPGH*
Ga0163162_103568093	3300013306	Switchgrass Rhizosphere	GSPQFQLEVSGLDALIDRTKNAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAAGGR*
Ga0163162_130011411	3300013306	Switchgrass Rhizosphere	VAGLDALMARTTQAGYRFLSVGGKPIQRPFGRFVFAIDPDSVLVEFVEPAGRAPTQ*
Ga0157375_105173941	3300013308	Miscanthus Rhizosphere	QVAGLDALMARTTQAGYRFLSVGGKPIQRPFGRFVFAIDPDGVLVEFVEPAIRAPIR*
Ga0075327_12066302	3300014272	Natural And Restored Wetlands	LSVGGLPIERPFGRFVFFLDSDNILVEYAEPAAGR*
Ga0075303_11400352	3300014299	Natural And Restored Wetlands	MNRPGKEALDALLERTTRAGYRFLSVGAKPIERPFGRFVFAIDPDGVLVEFVEPAR*
Ga0075340_10816252	3300014304	Natural And Restored Wetlands	DVLLERTHDAGYRFLSVDAKPIERAFGRFVFAIDPDGVLVEFVEPNDPKITD*
Ga0075350_11728862	3300014315	Natural And Restored Wetlands	QLQVRTLNPLIEQTKAAGYQFLSVGARPIQRAFGRFVFAIDPDGVLVEYVEPTAR*
Ga0075352_10216841	3300014324	Natural And Restored Wetlands	PQFQLQVMELDALLERTKQAGYRFLSVGAKPIQRPFGRFVFAIDPDGVLVEFVEPAARQ*
Ga0163163_116889511	3300014325	Switchgrass Rhizosphere	ALLERTARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPAVRAR*
Ga0163163_127341702	3300014325	Switchgrass Rhizosphere	GLDDLIERTRNAGYRFQSVAAKPIQRPFGRFVFAIDPDGVFVEFVEPATAAR*
Ga0173483_109196781	3300015077	Soil	LERTARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPTANVR*
Ga0173480_107586651	3300015200	Soil	VRDLDALIEQTKEAGYRFLSIGARPIQRAFGRFVFAIDPDGVLVEYVAPAPPR*
Ga0173480_112112751	3300015200	Soil	LEVRGLDGLLERTRAAGYRFLSVGGRPIQRPFGRFVFLLDADNILVEYAEPAAGR*
Ga0132257_1045010082	3300015373	Arabidopsis Rhizosphere	GLAALLERTARAGYRFLSVGGEPIQRPFGRFVFAIDSDGILVEFVEPTVRAR*
Ga0163161_118308562	3300017792	Switchgrass Rhizosphere	VGSPQLQIQVAGLDALMARTAQAGYRFLSVGGKPIQRPFGRFVFAIDPDGVLVEFVEPAKETR
Ga0187779_109367641	3300017959	Tropical Peatland	TARMAARWAGYRFLSVGARPIERPFGRFVFAIDPSGVLVEFVEPAR
Ga0181585_100415511	3300017969	Salt Marsh	LTETSARGYEFLSVDNKPIPRAFGRFVFAKDPDTVLVEFVEPN
Ga0184608_104370141	3300018028	Groundwater Sediment	EVSGLDTLIERTKRAGYRFLSVGATPIQRAFGRFVFAIDPDAVLVEFVEPTAR
Ga0184625_103214491	3300018081	Groundwater Sediment	SAGYRFLSVDARPIQRPFGRFVFAIDADGVLVEFVEPATD
Ga0190270_103819921	3300018469	Soil	QLQVAGLDALMARTTQAGYRFLSVEGKPIQRPFGRFVFAIDPDGVLVEFVEAAIRTPIR
Ga0190270_104403942	3300018469	Soil	EKTKAAGYQFLSVGARPIQRGFGRFVFAIDPDGVLVEYVEPTQR
Ga0190270_115842662	3300018469	Soil	GAPQFQLEVAGLDALLERTSRAGYRFLSVGAKPIQRPFGRFVFAIDPDGTLVEFVEPSMSAQ
Ga0190274_109223913	3300018476	Soil	VAGLDALLERTAREGYRFLSVGGEPIRRPFGRFVFAVDPDGILVEFVEPTVRAR
Ga0190271_113661492	3300018481	Soil	SPQFQLEVTRLDVLIKRTRSAGYRFLSVGARPIRRPFGRFVFAIDADHILVEYAEPSIAR
Ga0196976_10746601	3300020147	Soil	GLDDLIERTRAAGYRFLSLGARPIERPFGRFVFAIDADSILVEYAEPAARRSE
Ga0181605_104180981	3300020188	Salt Marsh	AVRNLDALLAETSARGYDFLSVDNKPIPRAFGRFVFVKDPDTVLVEFVEPAGE
Ga0181597_101145381	3300020194	Salt Marsh	QFQLAVRNLDALLAETSARGYDFLSVDNKPIPRAFGRFVFVKDPDTVLVEFVEPAGE
Ga0222719_103432591	3300021964	Estuarine Water	GSPQFQLQVSDIDAFIELTLDAGYEFLSWDAEPIQRNFGRFVFAIDPDGVLVEYVEPTIQ
Ga0255770_101057283	3300022937	Salt Marsh	SPQFQLEVKNLDALLTETSARGYDFLSVDNKPIPRAFGRFVFAKDPDTVLVEFVEPN
Ga0255768_104554472	3300023180	Salt Marsh	EVKNLDALLTETSARGYDFLSVDNKPIPRAFGRFVFAKDPDTVLVEFVEPN
Ga0255763_11112961	3300023273	Salt Marsh	DALLAETSARGYDFLSVDNKPIPRAFGRFVFVKDPDTVLVEFVEPAGE
Ga0247680_10353131	3300024246	Soil	PQFQLEVSGLDALIDRTKSAGYRFLSVGAKPIQRAFGRFVFAIDPDSVLVEFVEPAH
Ga0210098_10354192	3300025550	Natural And Restored Wetlands	DALLVRTRDAGHGFLSVEGRPIQRPFGRFVFAQDPDNVLVEFVEPEGVRP
Ga0207660_103180231	3300025917	Corn Rhizosphere	ALIERTRAAGYRFLSVGARPIQRPFGRFVFAIDSDGILVEYAEPAASR
Ga0207660_109791873	3300025917	Corn Rhizosphere	ARAAGYRFLSVGARPIQRPFGRFVFAIDRDGVLVEYVEPASPP
Ga0207646_104255543	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VGAPQFQLQVSGLEALLERTKGAGYRFLSIGAKPIERPFGRFVFAIDPDGVLVEFVEPANER
Ga0207681_101946923	3300025923	Switchgrass Rhizosphere	ERTTRAGYRFLSVGAKPIQRAFGRFVFAIDPDGVLVEFVEPASRAPIQ
Ga0207709_102060891	3300025935	Miscanthus Rhizosphere	ERTQAAGYRFLSVDARPIQRPFGRFVFVLDADGILVEYAEPAASR
Ga0207669_100383384	3300025937	Miscanthus Rhizosphere	IEVAGLDALIERTTRAGYRFLSVGAKPIQRPFGRFVFAIDPDGVLVEFVEPASRAPIQ
Ga0207704_104661321	3300025938	Miscanthus Rhizosphere	AGYRFLSVGARPIQRPFGRFVFAIDSDGILVEYAEPAASR
Ga0207691_107105622	3300025940	Miscanthus Rhizosphere	QVTGLDALLDRTKSAGYRFLSVDARPIQRPFGRFVFAIDADGVLVEFVEPATD
Ga0207658_121238322	3300025986	Switchgrass Rhizosphere	AALDALMARTTQAGYRFLSVGGKPIQRPFGRFVFAIDPDSVLVEFVEPAGRAPTQ
Ga0207703_101103021	3300026035	Switchgrass Rhizosphere	ERTKSAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPATGPR
Ga0207703_103582713	3300026035	Switchgrass Rhizosphere	FQLEVSGLDALIDRTKNAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAAGGR
Ga0207703_104766053	3300026035	Switchgrass Rhizosphere	AGYRFLSVDARPIQRAFGRFVFAIDPDGVLVEYVEPGH
Ga0207703_112899042	3300026035	Switchgrass Rhizosphere	ARTTQAGYRFLSVGGRPIQRPFGRFVFAIDPDGVLVEFVEPATQRKPI
Ga0207648_105165753	3300026089	Miscanthus Rhizosphere	ARTAGYRFLSVGARPIQRPFGRFVFLLDADNILVEYAEPAAGR
Ga0207648_111625781	3300026089	Miscanthus Rhizosphere	SGLDALIDRTKRAGYRFLSVDARPIQRAFGRFVFAIDPDGVLVEYVEPGH
Ga0209481_102778941	3300027880	Populus Rhizosphere	APQFQLEVAGLDALLERTAREGYRFLSVGGEPIQRPFGRFVFAIDPDGILVEFVEPSTRA
Ga0268266_111871681	3300028379	Switchgrass Rhizosphere	LDRTKSAGYRFLSVDARPIQRPFGRFVFAIDADGVLVEFVEPATD
Ga0247828_106353872	3300028587	Soil	FQLEVAGLDALIERTTRAGYRFLSVGAKPIQRAFGRFVFAIDPDGVLVEFVEPASRAPIQ
Ga0307503_109144162	3300028802	Soil	RTARAGYRFLSVGGKPIQRPFGRFVFAIDPDGVLVEFVEPAGRAPIQ
Ga0247825_106143971	3300028812	Soil	FQLEVRGLDGLLERTRAAGYRFLSVGARPIQRPFGRFVFLLDADHILVEYAEPAASR
Ga0247827_108835471	3300028889	Soil	LERTRAAGYRFLSVDARPIQRPFGRFVFLVDADNILVEYAEPNASR
Ga0302299_106513902	3300030010	Fen	YRFLSVGGKPIERPFGRFVFAIDPDGVLVEFVEPAAGRQPSRQP
Ga0247826_109707431	3300030336	Soil	DGLLERTQTAGYRFLSVGARPIQRPFGRFVFLLDADNILVEFAEPAAGR
Ga0307498_104853522	3300031170	Soil	EVSGLDALIDRTKNTGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAADGR
Ga0307500_100142281	3300031198	Soil	ALLERTAREGYRFLSVGGEPIQRPFGRFVFAIDADGILVEFVEPTVRAR
Ga0307497_102473472	3300031226	Soil	QFQLEVSGLDALIDRTKNAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAASAR
Ga0307497_102863181	3300031226	Soil	GLDGLLERTKNAGYRFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPARSGR
Ga0307497_103041731	3300031226	Soil	SPQLQLEVRGLDGLLERTRAAGYRFLSVEARPIRRPFGRFVFLLDADEILVEYAEPGSSP
Ga0265328_101872371	3300031239	Rhizosphere	GLDALIDRTKNAGYGFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAAR
Ga0310888_104004291	3300031538	Soil	ALLERTTRAGYRFLSVNAEPIQRPFGRFVFAIGPDGILVEFVEPTVRAR
Ga0310888_105506141	3300031538	Soil	TARAGYRFLSVGAKPIQRPFGRFVFAIDPDGILVEFVEPAVRVR
Ga0318561_107260781	3300031679	Soil	VRNLDALMARTQSAGYGFLSVGAKPIDRPFGRFVFAIGPDAELVEYVEPR
Ga0310904_114498431	3300031854	Soil	IERTKSAGYLFLSVGAKPIQRAFGRFVFAIDPDAVLVEFVEPAGR
Ga0310891_101551461	3300031913	Soil	LSVDARPIQRPFGRFVFVLDADGILVEYAEPAASR
Ga0310901_102400172	3300031940	Soil	PQFQLEVAGLDALLERTAREGYRFLSVGGEPIQRPFGRFVFAIDPDGILVEFVEPTVRAR
Ga0310885_107241951	3300031943	Soil	FQLEVAGLDALLERTARAGYRFLSVGGEPIQRPFGRFVFAIDPDGILVEFVEPSTRAQ
Ga0310899_100512811	3300032017	Soil	PQFQLEVAGLDALIERTTRAGYRFLSVGGKPIQRPFGRFVFAIDPDGVLVEFVEPASRAPIQ
Ga0315910_102235172	3300032144	Soil	GLDGLLERTLAAGYRPLSVGARPIERPFGRFVFLHDADNILVEYAEPNASR
Ga0315910_112497811	3300032144	Soil	FLSVGGRPIQRPFGRFVFLLDADNILVEYAEPAAGQ
Ga0315912_112850551	3300032157	Soil	LSVGGRPIQRPFGRFVFLLDADHILVEYAEPAASR
Ga0310896_101953962	3300032211	Soil	DVGAPQFQLEVAGLDALLERTARAGYRFLSVGAKPIQRPFGRFVFAVDPDGILVEFVEPAARGR
Ga0335070_102017713	3300032829	Soil	AAGYRFLSVGAKPIQRPFGRFVFAIGPDSELVEFVEPAAPR
Ga0335076_107387081	3300032955	Soil	FEVRGLDALITRTRAARYPFLSIGAKPIERPFGRFVFAIGQDTELVEYVEPR
Ga0326726_105810591	3300033433	Peat Soil	LDDLLERTTRAGYRFLSVGAKPIERPFGRFVFAIDPDGVLVEFVEPAH
Ga0247829_113880082	3300033550	Soil	FQLEVRGLDALIERTKAAGYRFLSVDARPISRPFGRFVFAIDADHILVEYAEPAAPR
Ga0247830_111176981	3300033551	Soil	QFQLQVRELNTLIEKTKAAGYQFLSVGARPIQRGFGRFVFAIDPDGVLVEYVEPTQR
Ga0314786_054843_590_760	3300034664	Soil	QLEVRGLDALIERTRTAGYRFLSVGARPIQRPFGRFVFLRDADDILVEYAEPAASR
Ga0314793_103085_471_596	3300034668	Soil	AAGYRFLSVDARPIQRPFGRFVFLLDADNILVEYVEPSGGP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051517

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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