Metagenome / Metatranscriptome Family F051515

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051515
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	52 residues
Representative Sequence	MKSVGMVLLLAGLPTFAFAGGVIAPEISPASGVAALALVSGALLVIRGRRKK
Number of Associated Samples	90
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.01 %
% of genes near scaffold ends (potentially truncated)	22.92 %
% of genes from short scaffolds (< 2000 bps)	78.47 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.694 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.806 % of family members)
Environment Ontology (ENVO)	Unclassified (50.694 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.139 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF04116	FA_hydroxylase	24.79
PF07883	Cupin_2	1.71
PF02558	ApbA	1.71
PF12796	Ank_2	0.85
PF08379	Bact_transglu_N	0.85
PF00135	COesterase	0.85
PF05935	Arylsulfotrans	0.85
PF07690	MFS_1	0.85
PF13709	DUF4159	0.85
PF05199	GMC_oxred_C	0.85
PF16320	Ribosomal_L12_N	0.85
PF02517	Rce1-like	0.85
PF00903	Glyoxalase	0.85
PF00753	Lactamase_B	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	24.79
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.85
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.85
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.69 %
Unclassified	root	N/A	49.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.69 %
Unclassified	root	N/A	49.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.69 %
Unclassified	root	N/A	49.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	28.47 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	26.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	21.53 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	4.17 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	21.53 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	4.17 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	21.53 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	4.17 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	21.53 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	4.17 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10026896	All Organisms → cellular organisms → Bacteria	3441	Open in IMG/M
3300001356\|JGI12269J14319_10371194	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300004071\|Ga0055486_10126493	Not Available	603	Open in IMG/M
3300004114\|Ga0062593_102170355	Not Available	621	Open in IMG/M
3300004114\|Ga0062593_102170355	Not Available	621	Open in IMG/M
3300004799\|Ga0058863_10728702	Not Available	640	Open in IMG/M
3300004803\|Ga0058862_11073986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	680	Open in IMG/M
3300005329\|Ga0070683_100008938	All Organisms → cellular organisms → Bacteria	8537	Open in IMG/M
3300005329\|Ga0070683_100008938	All Organisms → cellular organisms → Bacteria	8537	Open in IMG/M
3300005329\|Ga0070683_100011039	All Organisms → cellular organisms → Bacteria	7786	Open in IMG/M
3300005329\|Ga0070683_100011039	All Organisms → cellular organisms → Bacteria	7786	Open in IMG/M
3300005329\|Ga0070683_100044586	All Organisms → cellular organisms → Bacteria	4090	Open in IMG/M
3300005331\|Ga0070670_100933853	Not Available	787	Open in IMG/M
3300005331\|Ga0070670_100933853	Not Available	787	Open in IMG/M
3300005334\|Ga0068869_101688965	Not Available	565	Open in IMG/M
3300005338\|Ga0068868_100556557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300005340\|Ga0070689_100167754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1778	Open in IMG/M
3300005340\|Ga0070689_100167754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1778	Open in IMG/M
3300005345\|Ga0070692_11377550	Not Available	508	Open in IMG/M
3300005367\|Ga0070667_102121636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	529	Open in IMG/M
3300005436\|Ga0070713_100095558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2564	Open in IMG/M
3300005436\|Ga0070713_100095558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2564	Open in IMG/M
3300005436\|Ga0070713_100095558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2564	Open in IMG/M
3300005436\|Ga0070713_100522042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1122	Open in IMG/M
3300005437\|Ga0070710_10772161	Not Available	684	Open in IMG/M
3300005437\|Ga0070710_10772161	Not Available	684	Open in IMG/M
3300005439\|Ga0070711_100458319	Not Available	1045	Open in IMG/M
3300005439\|Ga0070711_100458319	Not Available	1045	Open in IMG/M
3300005439\|Ga0070711_100615937	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	907	Open in IMG/M
3300005468\|Ga0070707_100668102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1002	Open in IMG/M
3300005535\|Ga0070684_100059262	All Organisms → cellular organisms → Bacteria	3346	Open in IMG/M
3300005547\|Ga0070693_100152470	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300005547\|Ga0070693_100152470	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300005564\|Ga0070664_101416422	Not Available	657	Open in IMG/M
3300005564\|Ga0070664_101416422	Not Available	657	Open in IMG/M
3300005577\|Ga0068857_100746222	Not Available	932	Open in IMG/M
3300005578\|Ga0068854_102053412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	527	Open in IMG/M
3300005616\|Ga0068852_102407202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	547	Open in IMG/M
3300005616\|Ga0068852_102480664	Not Available	539	Open in IMG/M
3300005618\|Ga0068864_101119798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	784	Open in IMG/M
3300005618\|Ga0068864_101326458	Not Available	720	Open in IMG/M
3300005618\|Ga0068864_101326458	Not Available	720	Open in IMG/M
3300005834\|Ga0068851_10987424	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005836\|Ga0074470_11267645	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300005842\|Ga0068858_100032389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4855	Open in IMG/M
3300005842\|Ga0068858_100032389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4855	Open in IMG/M
3300006163\|Ga0070715_10174134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1074	Open in IMG/M
3300006163\|Ga0070715_10696063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	606	Open in IMG/M
3300006237\|Ga0097621_100082162	All Organisms → cellular organisms → Bacteria	2682	Open in IMG/M
3300006237\|Ga0097621_100082162	All Organisms → cellular organisms → Bacteria	2682	Open in IMG/M
3300006358\|Ga0068871_100858782	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	839	Open in IMG/M
3300006755\|Ga0079222_12065304	Not Available	562	Open in IMG/M
3300006755\|Ga0079222_12520810	Not Available	516	Open in IMG/M
3300006854\|Ga0075425_101145804	Not Available	885	Open in IMG/M
3300006893\|Ga0073928_10237778	Not Available	1401	Open in IMG/M
3300006893\|Ga0073928_10237778	Not Available	1401	Open in IMG/M
3300009098\|Ga0105245_10151874	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300009098\|Ga0105245_10151874	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300009098\|Ga0105245_13156277	Not Available	511	Open in IMG/M
3300009148\|Ga0105243_10807136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	925	Open in IMG/M
3300009174\|Ga0105241_11075997	Not Available	756	Open in IMG/M
3300009174\|Ga0105241_11456152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	658	Open in IMG/M
3300009176\|Ga0105242_13292178	Not Available	502	Open in IMG/M
3300009177\|Ga0105248_10132344	All Organisms → cellular organisms → Bacteria	2814	Open in IMG/M
3300009177\|Ga0105248_10132344	All Organisms → cellular organisms → Bacteria	2814	Open in IMG/M
3300009177\|Ga0105248_12572867	Not Available	580	Open in IMG/M
3300009553\|Ga0105249_10048046	All Organisms → cellular organisms → Bacteria	3891	Open in IMG/M
3300009700\|Ga0116217_10823816	Not Available	571	Open in IMG/M
3300009700\|Ga0116217_10823816	Not Available	571	Open in IMG/M
3300009839\|Ga0116223_10522798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	689	Open in IMG/M
3300010371\|Ga0134125_11605185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	708	Open in IMG/M
3300010379\|Ga0136449_100000053	All Organisms → cellular organisms → Bacteria	218430	Open in IMG/M
3300010379\|Ga0136449_100893979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1449	Open in IMG/M
3300010379\|Ga0136449_100893979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1449	Open in IMG/M
3300010397\|Ga0134124_11084216	Not Available	817	Open in IMG/M
3300010399\|Ga0134127_13032002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	548	Open in IMG/M
3300010399\|Ga0134127_13210146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	534	Open in IMG/M
3300010403\|Ga0134123_10662577	Not Available	1014	Open in IMG/M
3300010403\|Ga0134123_10662577	Not Available	1014	Open in IMG/M
3300011119\|Ga0105246_10128982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1886	Open in IMG/M
3300011119\|Ga0105246_10718094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	878	Open in IMG/M
3300011119\|Ga0105246_11490122	Not Available	635	Open in IMG/M
3300011119\|Ga0105246_11490122	Not Available	635	Open in IMG/M
3300012189\|Ga0137388_10919867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	808	Open in IMG/M
3300012982\|Ga0168317_1000927	All Organisms → cellular organisms → Bacteria	18151	Open in IMG/M
3300013306\|Ga0163162_13408128	Not Available	507	Open in IMG/M
3300013307\|Ga0157372_10018032	All Organisms → cellular organisms → Bacteria	7588	Open in IMG/M
3300013308\|Ga0157375_13426891	Not Available	528	Open in IMG/M
3300013308\|Ga0157375_13775305	Not Available	503	Open in IMG/M
3300014325\|Ga0163163_11177992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	829	Open in IMG/M
3300014501\|Ga0182024_10590114	Not Available	1393	Open in IMG/M
3300014501\|Ga0182024_10590114	Not Available	1393	Open in IMG/M
3300014745\|Ga0157377_10560898	Not Available	808	Open in IMG/M
3300014968\|Ga0157379_10161139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2025	Open in IMG/M
3300014969\|Ga0157376_10556336	Not Available	1136	Open in IMG/M
3300015371\|Ga0132258_13465484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1081	Open in IMG/M
3300017959\|Ga0187779_10742996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	666	Open in IMG/M
3300020070\|Ga0206356_10816672	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300020078\|Ga0206352_10001222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	595	Open in IMG/M
3300020082\|Ga0206353_10083009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	695	Open in IMG/M
3300021478\|Ga0210402_11653610	Not Available	567	Open in IMG/M
3300025899\|Ga0207642_10739821	Not Available	622	Open in IMG/M
3300025913\|Ga0207695_11131331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	663	Open in IMG/M
3300025914\|Ga0207671_10063646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2741	Open in IMG/M
3300025914\|Ga0207671_11201822	Not Available	593	Open in IMG/M
3300025914\|Ga0207671_11201822	Not Available	593	Open in IMG/M
3300025916\|Ga0207663_11517054	Not Available	540	Open in IMG/M
3300025922\|Ga0207646_11242657	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	652	Open in IMG/M
3300025923\|Ga0207681_11726035	Not Available	523	Open in IMG/M
3300025924\|Ga0207694_10005153	All Organisms → cellular organisms → Bacteria	10088	Open in IMG/M
3300025927\|Ga0207687_11700675	Not Available	541	Open in IMG/M
3300025934\|Ga0207686_10500722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	942	Open in IMG/M
3300025934\|Ga0207686_10584761	Not Available	877	Open in IMG/M
3300025934\|Ga0207686_10642450	Not Available	839	Open in IMG/M
3300025942\|Ga0207689_11425323	Not Available	580	Open in IMG/M
3300025944\|Ga0207661_10018187	All Organisms → cellular organisms → Bacteria	5221	Open in IMG/M
3300025945\|Ga0207679_11978567	Not Available	531	Open in IMG/M
3300025986\|Ga0207658_11975824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	531	Open in IMG/M
3300026035\|Ga0207703_11573850	Not Available	632	Open in IMG/M
3300026078\|Ga0207702_11282397	Not Available	727	Open in IMG/M
3300026088\|Ga0207641_12131967	Not Available	561	Open in IMG/M
3300026095\|Ga0207676_10661293	Not Available	1009	Open in IMG/M
3300026095\|Ga0207676_10661293	Not Available	1009	Open in IMG/M
3300026095\|Ga0207676_10677600	Not Available	997	Open in IMG/M
3300026095\|Ga0207676_11061236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	800	Open in IMG/M
3300026095\|Ga0207676_11839299	Not Available	604	Open in IMG/M
3300026116\|Ga0207674_10828676	Not Available	892	Open in IMG/M
3300027854\|Ga0209517_10005407	All Organisms → cellular organisms → Bacteria → Acidobacteria	16276	Open in IMG/M
3300027854\|Ga0209517_10023335	All Organisms → cellular organisms → Bacteria	5569	Open in IMG/M
3300027905\|Ga0209415_10017205	All Organisms → cellular organisms → Bacteria → Acidobacteria	11530	Open in IMG/M
3300028381\|Ga0268264_11756795	Not Available	630	Open in IMG/M
3300031057\|Ga0170834_102698134	Not Available	682	Open in IMG/M
3300031057\|Ga0170834_102698134	Not Available	682	Open in IMG/M
3300031057\|Ga0170834_103639073	Not Available	602	Open in IMG/M
3300031231\|Ga0170824_101427798	Not Available	661	Open in IMG/M
3300031231\|Ga0170824_101427798	Not Available	661	Open in IMG/M
3300031231\|Ga0170824_112345521	Not Available	596	Open in IMG/M
3300031231\|Ga0170824_121719285	Not Available	624	Open in IMG/M
3300031902\|Ga0302322_101077180	Not Available	971	Open in IMG/M
3300032160\|Ga0311301_10005192	All Organisms → cellular organisms → Bacteria → Acidobacteria	45948	Open in IMG/M
3300032160\|Ga0311301_10842320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1249	Open in IMG/M
3300032160\|Ga0311301_10842320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1249	Open in IMG/M
3300033412\|Ga0310810_11087799	Not Available	668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.69%
Host-Associated	Host-Associated	49.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.92%
Plants	Host-Associated → Plants	47.92%
Aquatic	Environmental → Aquatic	2.78%
Human	Host-Associated → Human	1.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.06%
Roots	Host-Associated → Plants → Roots	2.78%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.39%
Digestive System	Host-Associated → Human → Digestive System	1.39%
Marine	Environmental → Aquatic → Marine	0.69%
Sediment	Environmental → Aquatic → Sediment	0.69%
Peat	Environmental → Terrestrial → Peat	0.69%
Geologic	Environmental → Terrestrial → Geologic	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.53%
Loam	Environmental → Terrestrial → Soil → Loam	18.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.08%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.39%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.39%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%
Mine	Environmental → Terrestrial → Geologic → Mine	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.78%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.39%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.39%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	9.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.08%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.39%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.39%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.39%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.69%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004071	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100268962	3300000567	Peatlands Soil	MKFVGMVLFFVGLSSVAMAGGSAAPEISPASGVAALALVSGALLVIRGRRKK*
JGI12269J14319_103711941	3300001356	Peatlands Soil	MKFAGMVLVLAGFSSLAFAGGVAAPEIGPASGVGAVALLAGAILVIRGRRKK*
Ga0055486_101264931	3300004071	Natural And Restored Wetlands	MKLSVVVLLLVGSSTLALAAGLALVPEISPASGAGALALFSGVLLVIRGRRKK*
Ga0062593_1021703552	3300004114	Soil	MKLGGMFVLLLGFSSFAIAGFQAVPEISPASGVAAFALVSGALLVIRGRRKK*
Ga0062593_1021703553	3300004114	Soil	MKFIGMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRG
Ga0058863_107287022	3300004799	Host-Associated	MKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0058862_110739862	3300004803	Host-Associated	WLSEEFLMKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0070683_1000089384	3300005329	Corn Rhizosphere	MKFIGMVLLLAGFSSLAFAGAAPPAPEIGPASGVAALTLVSGAILVIRGRRKK*
Ga0070683_1000089386	3300005329	Corn Rhizosphere	MKSIGMVLLLLGASSFAFASLAPAAPEISPASGVAALTLASGAILVIRGRRKH*
Ga0070683_1000110398	3300005329	Corn Rhizosphere	MKSVGMAVLLLGLSSYAFAGLATVAPEISSASAVSAIALVSGAILVIRGRRKR*
Ga0070683_1000110399	3300005329	Corn Rhizosphere	MKIAGMMLLMMGLSGLVLGAVTTAPEISTASGLSALALLSGAILVIRGRRKNK*
Ga0070683_1000445866	3300005329	Corn Rhizosphere	MKIAGMLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0070670_1009338532	3300005331	Switchgrass Rhizosphere	MKLGGMIVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK*
Ga0070670_1009338533	3300005331	Switchgrass Rhizosphere	MKLVGMLVLFGGLSGLVVAGGPAVPEISPASGMSALALVSGALLVIRGRRKN*
Ga0068869_1016889651	3300005334	Miscanthus Rhizosphere	MKLGGMFVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK*
Ga0068868_1005565571	3300005338	Miscanthus Rhizosphere	MKSIGMMLLLVGVSSFAVAGGVVAPEISTASGVAAFALLSGTLLVIRGRRR
Ga0070689_1001677543	3300005340	Switchgrass Rhizosphere	MKFIGMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRGRRKK*
Ga0070689_1001677544	3300005340	Switchgrass Rhizosphere	MKSIGMMLLLVGISSFAVAGGVVAPEISPATGVSAFALLSG
Ga0070692_113775502	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKFTGMVLILMGLSSLAFAGVAAVPEIGPASGVGALALLAGGLLVIRGRRKRS*
Ga0070667_1021216361	3300005367	Switchgrass Rhizosphere	VLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR*
Ga0070713_1000955582	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKFSGMVLLVMGLSSLAMGAVVAAPEISPASGVAALALVSGAVLVIRGRRKH*
Ga0070713_1000955583	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKFIGIVLLLVSLSSLAFAGVGKPVPEIGPATGVAAVALVSGALLVIRGRRKKQSKEVR*
Ga0070713_1000955584	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKSIGIVLLILGFSTVAFAGGPTVPEISPASGVAAVALVSGALLVIRGRRKKQSKEVR*
Ga0070713_1005220422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKTAGMILLLAGLSSFVMGGASAVPEISPATGVGALALLSGAVLVIRGRHKRQ*
Ga0070710_107721611	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKTIGMALLLMGLSSFAFAGGVATPEISPATGVAGLALVSGAVLVIRGRRKK*
Ga0070710_107721612	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKTFGIASLLVGLSSFAMGGTPTTPEISPATGVAALALVSGAVLVIRGRRKK*
Ga0070711_1004583191	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKFAGMVLLMMGLSGLAMGAVVAAPEISPASGVAALALVSGAILVIRGRRKH*
Ga0070711_1004583192	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKFIGIAVLLAGLANVALAGTFSVPEIGPATGVAAVALVSGALLVIRGRRKK*
Ga0070711_1006159371	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKFLGFALLLTGFSSLAFAGLAPVVPEISPASGVAALTLVSGAILVIRGRRKH*
Ga0070707_1006681021	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	APTGNLQCRRSVMKSIGIVLLILGFSTVAFAGGPTVPEISPASGVAAVALVSGALLVIRGRRKKQSKEVR*
Ga0070684_1000592626	3300005535	Corn Rhizosphere	MKFIGMVLLLAGFSSLAFAGAPPPAPEIGPASGVAALTLVSGAILVIRGRRKK*
Ga0070693_1001524701	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKIAGMMLLMMGLSGLVMGAVTTAPEISTASGLSALALLSGAILVIRGRRKNK*
Ga0070693_1001524702	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKSVGMVVLLLGLSSYAFAGLSTVAPEISSASAVSAIALVSGAILVIRGRRKR*
Ga0070664_1014164221	3300005564	Corn Rhizosphere	GMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRGRRKK*
Ga0070664_1014164222	3300005564	Corn Rhizosphere	MKSIGMMLLLVGISSFAVAGGVVAPEISPATGVSAFALLSGALLVIRGRRRK*
Ga0068857_1007462222	3300005577	Corn Rhizosphere	MKLVGMLVLFGGLSGLVVAGGPAVPEISPASGMAALALVSGALLIVRGRRKK*
Ga0068854_1020534122	3300005578	Corn Rhizosphere	MKLIGMMLLLLGAASCAFAAVPEISPASGTAALALVSGGLLVARGRRKR*
Ga0068852_1024072023	3300005616	Corn Rhizosphere	GMVLILAGFSSLAFAGVTPSAPEIGPASGVAALTLVSGAILVIRGRRKK*
Ga0068852_1024806642	3300005616	Corn Rhizosphere	MKSFGMILLLAGLSSLTMAGTLTVPEVSPASGLAALAMVSGVLLVIRGRRKK*
Ga0068864_1011197982	3300005618	Switchgrass Rhizosphere	MKLIGMMLLLAGFASCAFAAVPEISPASGTAALALVSGGLLVARGRRKR*
Ga0068864_1013264581	3300005618	Switchgrass Rhizosphere	MRFVGTMLLLVGVSTLAMAGSPNVPEVSPASGLAALAMVSGALLVIRGRRKK*
Ga0068864_1013264584	3300005618	Switchgrass Rhizosphere	VLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK*
Ga0068851_109874241	3300005834	Corn Rhizosphere	MKSIGLVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR*
Ga0074470_112676451	3300005836	Sediment (Intertidal)	MKFGGMVLLLVGLSSFAMGSNVVAPEISPASAVGALALVSGGLLVIRGRRKR*
Ga0068858_1000323894	3300005842	Switchgrass Rhizosphere	MKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLVSGAILVIRGRRKQ*
Ga0068858_1000323895	3300005842	Switchgrass Rhizosphere	MKIIGIALLLVGVASLAFAGTPVAPEISPASGVAALTLVSGAILVIRGRRKK*
Ga0070715_101741342	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKTAGMILLLAGLSSFVMGGASAVPEISPATGVGALALLSGAVLVIRGRRKRQ*
Ga0070715_106960631	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLGMVLLVLALPGFVFAAAVSAPEISPASGVAGLALVSGAVLVIRGRRKS*
Ga0097621_1000821623	3300006237	Miscanthus Rhizosphere	MKTFGLALLFAGLSSLAFAGTLAVPEISPASGVAALTLVSGAILVIRGRRKR*
Ga0097621_1000821624	3300006237	Miscanthus Rhizosphere	MKFFGMALLLVAAASSAFAGGVTVPEISPASGVAALTLVSGAILVIRSRRKQ*
Ga0068871_1008587822	3300006358	Miscanthus Rhizosphere	MKSIGMVLLLAGLSGVAIAGTAGVPEISATSGAAALAVLSGAILVIRGRRKRN*
Ga0079222_120653042	3300006755	Agricultural Soil	MKSLGMVLLLVGFSGFSMAGALVAAPEISPISGVTAIALISGAMLVVRGRRKK*
Ga0079222_125208102	3300006755	Agricultural Soil	MKFFGMMLLLLGSSSLAFAGLVAAAPEISAASGVGALALLSGALLVIRGRRGR*
Ga0075425_1011458042	3300006854	Populus Rhizosphere	MKSVGMVLLLVGLSTLAFAGSPTVPEISPASGVAALAMVSGAVLVIRGRRKR*
Ga0073928_102377781	3300006893	Iron-Sulfur Acid Spring	MRKFLGLILLMAGASMMLDAGFLAVPEISPASGVAALAMLSGALLVIRGRRKK*
Ga0073928_102377782	3300006893	Iron-Sulfur Acid Spring	MKSAGFVLLLIGLSSFATAGLATAAPEIGPASSGAAIALLSGALLVIRGRRKR*
Ga0105245_101518743	3300009098	Miscanthus Rhizosphere	MKMIGIVLLLVSVASLAFAGGVVVPEISPASGVAGLTLVSGALLVIRGRRKQ*
Ga0105245_101518744	3300009098	Miscanthus Rhizosphere	MKSFGMILILVGCSSLAFAGVAPSAPEIGPASGVAALTLVSGAILVIRGRRKK*
Ga0105245_131562771	3300009098	Miscanthus Rhizosphere	MKLGGMFVLLLGFSSFAIAGFQAVPEISPASGVAAFALVSGALLVIRSRRRK*
Ga0105243_108071361	3300009148	Miscanthus Rhizosphere	MKSIGMMLLFAGLSSLAMAGVFVSAPEISPASGVAALALVSGAILVIRGRSRR*
Ga0105241_110759972	3300009174	Corn Rhizosphere	MKFVGGVLLLAGLTTVAFAGGAAAPEVSPASGVAALALVSGAILVIRGRHRK*
Ga0105241_114561522	3300009174	Corn Rhizosphere	MKLAGMLLLMMGLSGLVMGAAVATPEISAATGLSALTLLAGAVLVIRGRRQR*
Ga0105242_132921781	3300009176	Miscanthus Rhizosphere	MILLLAGLSSLTMAGTLTVPEVSPASGLAALAMVSGVLLVIRGRRKK*
Ga0105248_101323444	3300009177	Switchgrass Rhizosphere	MKFIGMALLLVSVASLAFAGATVAPEISPASGVAALALVSGAILVIRGRRKK*
Ga0105248_101323445	3300009177	Switchgrass Rhizosphere	MKIIGIALLMVGAASLAFAGTPVAPEISPASGVAALTLVSGAILVIRGRRKK*
Ga0105248_125728673	3300009177	Switchgrass Rhizosphere	PFGGLAFMKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLVSGAILVIRGRRKQ*
Ga0105249_100480467	3300009553	Switchgrass Rhizosphere	MKSIGLVLLLLGASSFAFAGLNVVAPEISPSSGVAALTLVSGAILVIRGRRKR*
Ga0116217_108238161	3300009700	Peatlands Soil	MKFVGITLLFAGLSSVVLADVTTAPEVSPASGVAALALVSGAVLVIRGRRKSS
Ga0116217_108238162	3300009700	Peatlands Soil	MKSVGLVMLLVGLSTLAFAGEPTAPEISPASGVAAIALVSGAVLVIRSRRKK*
Ga0116223_105227982	3300009839	Peatlands Soil	MKFGIVLVLTSFSSLAFAGTGTAPEIGPESGVGAVALLAGAILVIRSRRKR*
Ga0134125_116051852	3300010371	Terrestrial Soil	EEFLMKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0136449_100000053104	3300010379	Peatlands Soil	MVGMKFVGMVLFFVGLSSVAMAGGSAAPEISPASGVAALALVSGALLVIRGRRKK*
Ga0136449_1008939791	3300010379	Peatlands Soil	MKSIGIAFLLVGFSAFAFAGSARAPEISPASGVAALAMISGALLVIRGRRKK*
Ga0136449_1008939792	3300010379	Peatlands Soil	MKFAGIALLLMGLASIAFAGIHTVPEIGPVSGVAALALVSGALLVIRGRRKK*
Ga0134124_110842162	3300010397	Terrestrial Soil	MKFFGMALLLVAAASSAFAGGVTVPEISPASGVAALTLVSGAILVIRG
Ga0134127_130320022	3300010399	Terrestrial Soil	DTFAAGDTWLSEEFLMKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0134127_132101461	3300010399	Terrestrial Soil	MILLAVGVSNLAVAGATTAPEISPASGVAALALVSGAVLVIRARRRK*
Ga0134123_106625774	3300010403	Terrestrial Soil	MLLLVGVSTLAMAGSPNVPEVSPASGLAALAMVSGALLVIRGRRKK*
Ga0134123_106625775	3300010403	Terrestrial Soil	IREVWFLMKSIGMMLLLVGVSSFAVAGGVVAPEISTASGVAAFALLSGTLLVIRGRRRK*
Ga0105246_101289822	3300011119	Miscanthus Rhizosphere	MKSFGMILLLAGLSSFTIAGTLTVPEVSPASGLAALAMVSGVLLVIRGRRKK*
Ga0105246_107180942	3300011119	Miscanthus Rhizosphere	MKLGGMIVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRG
Ga0105246_114901221	3300011119	Miscanthus Rhizosphere	LVLFGGLSGLVLASGPAVPEISPASGMAALALVSGALLIVRGRRKN*
Ga0105246_114901222	3300011119	Miscanthus Rhizosphere	MKSIGMMLLLVGLSSFAVAGGVVAPEISPATGVSAFALLSGALLVIRGRRRK*
Ga0137388_109198671	3300012189	Vadose Zone Soil	LGTMLLLVGLCQFASGGAVAAPEINPESGVAAFALLSGALLVIRGRRKS*
Ga0168317_10009275	3300012982	Weathered Mine Tailings	MKILGMFLLLASVSSLAMAGTNPIPEISPASGAAAIALVSGALLVIRGRRKR*
Ga0163162_134081283	3300013306	Switchgrass Rhizosphere	MKTFGLALLFAGLSSLAFAGTLAVPEISPASGVAALTLVSGAILVIRGRRK
Ga0157372_100180327	3300013307	Corn Rhizosphere	MKFIGMVLLLAGFSSLAFAGAAPPAPEIGPASGVAALTLVSGAILVIRGRRKNRTGI*
Ga0157375_134268911	3300013308	Miscanthus Rhizosphere	MKTFGFALLFAGLSSLAFAGTPTVPEISPASGVAALTLVSGAILVIRGRRK
Ga0157375_137753053	3300013308	Miscanthus Rhizosphere	MKLGGMIVLLLGFSSFAIAGFQAVPEISPASGVAAFAIVSGALLVIRGRRKK*
Ga0163163_111779923	3300014325	Switchgrass Rhizosphere	MKSIGLVLLLLGASSFAFAGLNVVAPEISPTSGVAALTLVSGAILVIRGRRKR*
Ga0182024_105901142	3300014501	Permafrost	MKFAGMVLLVMGLSGLAMGAALAAPEISPATGLGALALLSGAILVIRGRRKH*
Ga0182024_105901143	3300014501	Permafrost	MKSVGIVFLLVGFSTFAFAGFTSAPEISPASGVAALALVSGAILVIRGRRKK*
Ga0157377_105608981	3300014745	Miscanthus Rhizosphere	MKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLISGAILVIRGRRKQ*
Ga0157379_101611393	3300014968	Switchgrass Rhizosphere	MKSVGMVLLLAGLPTFAFAGGVIAPEISPASGVAALALVSGALLVIRGRRKK*
Ga0157376_105563361	3300014969	Miscanthus Rhizosphere	MKFFGMALLLVAAASSAFAGGVTVPEISPASGVAALTLVSGAILVIR
Ga0132258_134654843	3300015371	Arabidopsis Rhizosphere	MTKILGVTLVLIGVAQFAIAGGATPAPEISPGSAAAALALLSGAILVIRGRRRK*
Ga0187779_107429963	3300017959	Tropical Peatland	MKFVGMALLLAGFSGLALAGGVAAPEIGPASGVGAVALLAGGILVIRGRRKQ
Ga0206356_108166723	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR
Ga0206352_100012221	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MKIAGMLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR
Ga0206353_100830092	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	WLSEEFLMKIAGMLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR
Ga0210402_116536102	3300021478	Soil	MKSFGMMLLLVGFASLAMAGASPTPEISPATGVAGLAMVSGAVLVIRGRRKKS
Ga0242657_11864242	3300022722	Soil	ALLVIGCSGFVFAGGVAVPEVSPATGVGALALVSGAVLVIRGRRKK
Ga0207642_107398212	3300025899	Miscanthus Rhizosphere	MKLGGMIVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK
Ga0207695_111313313	3300025913	Corn Rhizosphere	TGGFNSMKSIGLVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKK
Ga0207671_100636464	3300025914	Corn Rhizosphere	MKFIGMVLLLAGFSSLAFAGAPPPAPEIGPASGVAALTLVSGAILVIRGRRKK
Ga0207671_112018222	3300025914	Corn Rhizosphere	MKIIGIALLLVGVASLAFAGTPVAPEISPASGVAALTLVSGAILVIRGRRKK
Ga0207671_112018223	3300025914	Corn Rhizosphere	MKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLVSGAILVIRGRRKQ
Ga0207663_115170541	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKMIGIVLLLVSVASLAFAGGVVVPEISPASGVAGLTLVSGALLVIRGRRKQ
Ga0207646_112426572	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKFSGMVLLVMGLSSLAMGAVVAAPEISPASGVAALALVSGAVLVIRGRRKH
Ga0207681_117260351	3300025923	Switchgrass Rhizosphere	MKLVGMLVLFGGLSGLVVAGGPAVPEISPASGMSALALVSGALLVIRGRRKN
Ga0207694_1000515315	3300025924	Corn Rhizosphere	MKSIGLVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR
Ga0207687_117006751	3300025927	Miscanthus Rhizosphere	MKIAGMMLLMMGLSGLVLGAVTTAPEISTASGLSALALLSGAILVIRGRRKNK
Ga0207686_105007221	3300025934	Miscanthus Rhizosphere	MKSIGMMLLFAGLSSLAMAGVFVSAPEISPASGVAALALVSGAILVIRGRSRR
Ga0207686_105847612	3300025934	Miscanthus Rhizosphere	MKFVGGVLLLAGLTTVAFAGGAAAPEVSPASGVAALALVSGAILVIRGRHRK
Ga0207686_106424502	3300025934	Miscanthus Rhizosphere	MKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLVSGAILVIRGRRQK
Ga0207689_114253233	3300025942	Miscanthus Rhizosphere	MKFIGMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRGRRK
Ga0207661_100181874	3300025944	Corn Rhizosphere	MKSVGMAVLLLGLSSYAFAGLATVAPEISSASAVSAIALVSGAILVIRGRRKR
Ga0207679_119785672	3300025945	Corn Rhizosphere	MKSIGMMLLLVGISSFAVAGGVVAPEISPASGTAALALVSGGLLVARGRRKR
Ga0207658_119758241	3300025986	Switchgrass Rhizosphere	AAGARNRTGGFNSMKSIGLVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR
Ga0207703_115738502	3300026035	Switchgrass Rhizosphere	MKFFGMALLLVAAASSAFAGGVTVPEISPASGVAALTLVSGAIL
Ga0207702_112823973	3300026078	Corn Rhizosphere	MKSIGMVLLLLGASSFAFASLAPAAPEISPASGVAALTLASGAILVIRG
Ga0207641_121319673	3300026088	Switchgrass Rhizosphere	MKFIGMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRGRRKK
Ga0207676_106612933	3300026095	Switchgrass Rhizosphere	MLLLVGVSTLAMAGSPNVPEVSPASGLAALAMVSGALLVIRGRRKK
Ga0207676_106612936	3300026095	Switchgrass Rhizosphere	VLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK
Ga0207676_106776003	3300026095	Switchgrass Rhizosphere	MKSIGMMLLLVGISSFAVAGGVVAPEISPATGVSAFALLSGALLVIRGRRRK
Ga0207676_110612362	3300026095	Switchgrass Rhizosphere	GVRNNEGVWIDMKLIGMMLLLAGFASCAFAAVPEISPASGTAALALVSGGLLVARGRRKR
Ga0207676_118392991	3300026095	Switchgrass Rhizosphere	MKFVGTMLFFVGLSSLAMAGSTNVPEVSPASGAAALALISGALLVIRGRRRK
Ga0207674_108286762	3300026116	Corn Rhizosphere	MKLVGMLVLFGGLSGLVVAGGPAVPEISPASGMAALALVSGALLIVRGRRKK
Ga0209517_100054074	3300027854	Peatlands Soil	MKFVGMVLFFVGLSSVAMAGGSAAPEISPASGVAALALVSGALLVIRGRRKK
Ga0209517_100233354	3300027854	Peatlands Soil	MKFGIVLVLTSFSSLAFAGTGTAPEIGPESGVGAVALLAGAILVIRSRRKR
Ga0209415_1001720512	3300027905	Peatlands Soil	MKSVGLVMLLVGLSTLAFAGEPTAPEISPASGVAAIALVSGAVLVIRSRRKK
Ga0268264_117567951	3300028381	Switchgrass Rhizosphere	MKLGGMIVLLLGFSSFAIAGFQGFPEISPASGVAAFALVSGALLVIRGRRKK
Ga0170834_1026981341	3300031057	Forest Soil	MKTVGMILLLIGCSGFVFAGAPSTPEISPATGVAALAMVSGSVLVIRGRRKK
Ga0170834_1026981342	3300031057	Forest Soil	MKTFGMALLLIGCSGFCFAAAVAAPEISPASGVTAIALVSGAVLVIRGRRKK
Ga0170834_1036390731	3300031057	Forest Soil	MKPIGMVLILVGISTFAFAGGPTVPEVGPASGVAALALVSGALLVIRGRRKK
Ga0170824_1014277982	3300031231	Forest Soil	MKSFGMLLLLAGFASLAMAGPPAAPEISPATGVAGLALVSGAVLVIRGRRKKS
Ga0170824_1014277983	3300031231	Forest Soil	MKSVGMLLLLVGFASLAMAGVGSAPEISPATGVAGLALVSGAVLVIRGRRKKS
Ga0170824_1123455213	3300031231	Forest Soil	MKTVGMILLLIGCSGFVFAGAPATPEISPATGVAALALVSGAVLVIRGRRKK
Ga0170824_1217192851	3300031231	Forest Soil	MKSIGMVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR
Ga0302322_1010771802	3300031902	Fen	MKSLGLVLLLVGLSTFALAGGGIAPEISPASGVSALALVSGALLVMRGRRKK
Ga0311301_1000519224	3300032160	Peatlands Soil	MKFAGMVLVLAGFSSLAFAGGVAAPEIGPASGVGAVALLAGAILVIRGRRKK
Ga0311301_108423201	3300032160	Peatlands Soil	MKSIGIAFLLVGFSAFAFAGSARAPEISPASGVAALAMISGALLVIRGRRKK
Ga0311301_108423202	3300032160	Peatlands Soil	MKFAGIALLLMGLASIAFAGIHTVPEIGPVSGVAALALVSGALLVIRGRRKK
Ga0310810_110877992	3300033412	Soil	MKFLGIMLLLAGVSSFAMAGAAAAPEISPASGVGALALLSGGLLVIRGRSRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051515

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences