Metagenome / Metatranscriptome Family F051505

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051505
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	67 residues
Representative Sequence	MTMRSAASLALLGAVLVTILLVVGFVLDLLNVLQGLIPALRLVTSFIYAFAGVGAVVFLCVFRKAQS
Number of Associated Samples	120
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	22.22 %
% of genes from short scaffolds (< 2000 bps)	70.14 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.861 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (15.278 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.222 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.42% β-sheet: 0.00% Coil/Unstructured: 31.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF05378	Hydant_A_N	22.22
PF08241	Methyltransf_11	8.33
PF05685	Uma2	3.47
PF13551	HTH_29	2.78
PF13649	Methyltransf_25	2.78
PF13458	Peripla_BP_6	2.08
PF13489	Methyltransf_23	2.08
PF13472	Lipase_GDSL_2	2.08
PF03729	DUF308	2.08
PF04909	Amidohydro_2	2.08
PF14534	DUF4440	2.08
PF13847	Methyltransf_31	1.39
PF00027	cNMP_binding	1.39
PF00106	adh_short	1.39
PF04020	Phage_holin_4_2	0.69
PF13365	Trypsin_2	0.69
PF12420	DUF3671	0.69
PF13231	PMT_2	0.69
PF12697	Abhydrolase_6	0.69
PF02687	FtsX	0.69
PF13683	rve_3	0.69
PF02897	Peptidase_S9_N	0.69
PF10816	DUF2760	0.69
PF09723	Zn-ribbon_8	0.69
PF02776	TPP_enzyme_N	0.69
PF01565	FAD_binding_4	0.69
PF12706	Lactamase_B_2	0.69
PF12146	Hydrolase_4	0.69
PF00378	ECH_1	0.69
PF10851	DUF2652	0.69
PF04972	BON	0.69
PF03167	UDG	0.69
PF09190	DALR_2	0.69
PF13350	Y_phosphatase3	0.69
PF02538	Hydantoinase_B	0.69
PF12725	DUF3810	0.69
PF00496	SBP_bac_5	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	44.44
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	3.47
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	2.08
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.39
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.69
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.69
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.69
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.69
COG1770	Protease II	Amino acid transport and metabolism [E]	0.69
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.69
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.86 %
Unclassified	root	N/A	20.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.86 %
Unclassified	root	N/A	20.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.86 %
Unclassified	root	N/A	20.14 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	27.08 %
Unclassified	root	N/A	20.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.39 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	27.08 %
Unclassified	root	N/A	20.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	27.08 %
Unclassified	root	N/A	20.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.39 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	26.39 %
Unclassified	root	N/A	20.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.39 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	26.39 %
Unclassified	root	N/A	20.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS401A4X45	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300000956\|JGI10216J12902_116186222	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300000956\|JGI10216J12902_118001520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300002245\|JGIcombinedJ26739_100579741	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300002245\|JGIcombinedJ26739_100858081	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	789	Open in IMG/M
3300002886\|JGI25612J43240_1018631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1027	Open in IMG/M
3300002899\|JGIcombinedJ43975_10061718	Not Available	645	Open in IMG/M
3300002914\|JGI25617J43924_10244515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300003324\|soilH2_10000435	All Organisms → cellular organisms → Bacteria	10537	Open in IMG/M
3300004052\|Ga0055490_10255458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300004114\|Ga0062593_101253744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	782	Open in IMG/M
3300004114\|Ga0062593_101278098	Not Available	776	Open in IMG/M
3300004156\|Ga0062589_100034707	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300004156\|Ga0062589_100340100	Not Available	1185	Open in IMG/M
3300004463\|Ga0063356_104402118	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300004479\|Ga0062595_100973560	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005293\|Ga0065715_10553443	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	739	Open in IMG/M
3300005295\|Ga0065707_10946472	Not Available	553	Open in IMG/M
3300005330\|Ga0070690_100111771	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300005331\|Ga0070670_100031275	All Organisms → cellular organisms → Bacteria	4583	Open in IMG/M
3300005332\|Ga0066388_102202698	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300005341\|Ga0070691_10740425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300005434\|Ga0070709_10045227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2731	Open in IMG/M
3300005440\|Ga0070705_100747911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	773	Open in IMG/M
3300005444\|Ga0070694_101477719	Not Available	575	Open in IMG/M
3300005445\|Ga0070708_100005910	All Organisms → cellular organisms → Bacteria	9726	Open in IMG/M
3300005445\|Ga0070708_100031229	All Organisms → cellular organisms → Bacteria	4609	Open in IMG/M
3300005445\|Ga0070708_100334882	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300005445\|Ga0070708_100385872	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300005445\|Ga0070708_100662221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300005457\|Ga0070662_100203966	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1570	Open in IMG/M
3300005458\|Ga0070681_10721729	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300005467\|Ga0070706_100026189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5367	Open in IMG/M
3300005468\|Ga0070707_100053856	All Organisms → cellular organisms → Bacteria	3857	Open in IMG/M
3300005535\|Ga0070684_100121503	All Organisms → cellular organisms → Bacteria	2350	Open in IMG/M
3300005546\|Ga0070696_100448426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1018	Open in IMG/M
3300005546\|Ga0070696_100640159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	861	Open in IMG/M
3300005547\|Ga0070693_100130550	Not Available	1570	Open in IMG/M
3300005549\|Ga0070704_100853072	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	817	Open in IMG/M
3300005937\|Ga0081455_10000080	All Organisms → cellular organisms → Bacteria	104190	Open in IMG/M
3300005985\|Ga0081539_10083397	All Organisms → cellular organisms → Bacteria → Proteobacteria	1673	Open in IMG/M
3300006041\|Ga0075023_100013442	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2163	Open in IMG/M
3300006163\|Ga0070715_10341572	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300006173\|Ga0070716_100350601	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300006176\|Ga0070765_100380168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300006755\|Ga0079222_10463313	All Organisms → cellular organisms → Bacteria → Proteobacteria	912	Open in IMG/M
3300006755\|Ga0079222_11708595	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300006804\|Ga0079221_11755153	Not Available	507	Open in IMG/M
3300006806\|Ga0079220_11316153	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006845\|Ga0075421_100190401	All Organisms → cellular organisms → Bacteria	2545	Open in IMG/M
3300006854\|Ga0075425_100257536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2007	Open in IMG/M
3300006914\|Ga0075436_101517225	Not Available	509	Open in IMG/M
3300007265\|Ga0099794_10022614	All Organisms → cellular organisms → Bacteria → Proteobacteria	2868	Open in IMG/M
3300009053\|Ga0105095_10389851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	769	Open in IMG/M
3300009078\|Ga0105106_11330215	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300009087\|Ga0105107_11138893	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300009143\|Ga0099792_10031025	All Organisms → cellular organisms → Bacteria	2475	Open in IMG/M
3300009143\|Ga0099792_10032534	Not Available	2427	Open in IMG/M
3300009148\|Ga0105243_11000709	Not Available	838	Open in IMG/M
3300009148\|Ga0105243_12289499	Not Available	578	Open in IMG/M
3300009157\|Ga0105092_10523091	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300009545\|Ga0105237_10131234	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2500	Open in IMG/M
3300009553\|Ga0105249_11046881	Not Available	885	Open in IMG/M
3300010359\|Ga0126376_10120848	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2043	Open in IMG/M
3300010360\|Ga0126372_10122176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2015	Open in IMG/M
3300010362\|Ga0126377_10865118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	965	Open in IMG/M
3300010366\|Ga0126379_10391809	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1434	Open in IMG/M
3300010371\|Ga0134125_11509095	Not Available	732	Open in IMG/M
3300010400\|Ga0134122_10852301	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	876	Open in IMG/M
3300010401\|Ga0134121_10818146	Not Available	897	Open in IMG/M
3300010401\|Ga0134121_11557059	Not Available	679	Open in IMG/M
3300010403\|Ga0134123_10109857	All Organisms → cellular organisms → Bacteria → Proteobacteria	2213	Open in IMG/M
3300011120\|Ga0150983_14793208	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300012202\|Ga0137363_10102900	Not Available	2174	Open in IMG/M
3300012349\|Ga0137387_10736996	Not Available	713	Open in IMG/M
3300012362\|Ga0137361_11253387	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	665	Open in IMG/M
3300012917\|Ga0137395_10029780	Not Available	3278	Open in IMG/M
3300012918\|Ga0137396_10991516	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300012925\|Ga0137419_10660961	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	844	Open in IMG/M
3300013297\|Ga0157378_11440740	Not Available	732	Open in IMG/M
3300015241\|Ga0137418_10127299	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300015371\|Ga0132258_10016420	All Organisms → cellular organisms → Bacteria	15901	Open in IMG/M
3300015371\|Ga0132258_10357526	All Organisms → cellular organisms → Bacteria → Proteobacteria	3613	Open in IMG/M
3300015371\|Ga0132258_12609675	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300015373\|Ga0132257_103120946	Not Available	603	Open in IMG/M
3300018056\|Ga0184623_10005312	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5481	Open in IMG/M
3300018422\|Ga0190265_10016380	All Organisms → cellular organisms → Bacteria	5772	Open in IMG/M
3300019879\|Ga0193723_1005998	All Organisms → cellular organisms → Bacteria → Proteobacteria	4085	Open in IMG/M
3300019881\|Ga0193707_1144914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300020070\|Ga0206356_10692978	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300021344\|Ga0193719_10069545	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300021432\|Ga0210384_10031206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4982	Open in IMG/M
3300021432\|Ga0210384_10049724	All Organisms → cellular organisms → Bacteria	3813	Open in IMG/M
3300021559\|Ga0210409_10339682	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300025893\|Ga0207682_10633025	Not Available	503	Open in IMG/M
3300025899\|Ga0207642_10715013	Not Available	632	Open in IMG/M
3300025907\|Ga0207645_10685836	Not Available	696	Open in IMG/M
3300025910\|Ga0207684_10013217	All Organisms → cellular organisms → Bacteria	7146	Open in IMG/M
3300025910\|Ga0207684_10039854	All Organisms → cellular organisms → Bacteria → Proteobacteria	3982	Open in IMG/M
3300025910\|Ga0207684_10078315	All Organisms → cellular organisms → Bacteria	2811	Open in IMG/M
3300025912\|Ga0207707_11325063	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300025915\|Ga0207693_10215332	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300025917\|Ga0207660_10623363	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300025922\|Ga0207646_11255642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300025926\|Ga0207659_11801429	Not Available	520	Open in IMG/M
3300025934\|Ga0207686_11632036	Not Available	533	Open in IMG/M
3300025935\|Ga0207709_11254926	Not Available	612	Open in IMG/M
3300025942\|Ga0207689_10021035	All Organisms → cellular organisms → Bacteria → Proteobacteria	5484	Open in IMG/M
3300025971\|Ga0210102_1128900	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300026015\|Ga0208286_1005740	Not Available	842	Open in IMG/M
3300026142\|Ga0207698_11802416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300026285\|Ga0209438_1018400	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2334	Open in IMG/M
3300026285\|Ga0209438_1056797	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300026351\|Ga0257170_1005199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1506	Open in IMG/M
3300026359\|Ga0257163_1057819	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300026496\|Ga0257157_1043300	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300026514\|Ga0257168_1010264	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1768	Open in IMG/M
3300026529\|Ga0209806_1226868	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	634	Open in IMG/M
3300026557\|Ga0179587_10110170	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300027410\|Ga0207541_105478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300027605\|Ga0209329_1028511	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300027727\|Ga0209328_10175788	Not Available	649	Open in IMG/M
3300027765\|Ga0209073_10403838	Not Available	561	Open in IMG/M
3300027894\|Ga0209068_10041826	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2305	Open in IMG/M
3300027909\|Ga0209382_10298029	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300028047\|Ga0209526_10113946	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300028047\|Ga0209526_10416938	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300029636\|Ga0222749_10051376	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1009666	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10009154	All Organisms → cellular organisms → Bacteria	2549	Open in IMG/M
3300031538\|Ga0310888_10921740	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300031720\|Ga0307469_10007154	All Organisms → cellular organisms → Bacteria	5144	Open in IMG/M
3300031720\|Ga0307469_10200602	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300031740\|Ga0307468_100142991	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300031908\|Ga0310900_11198895	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	631	Open in IMG/M
3300031962\|Ga0307479_10045929	All Organisms → cellular organisms → Bacteria	4196	Open in IMG/M
3300031962\|Ga0307479_10054013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3867	Open in IMG/M
3300032174\|Ga0307470_10017145	All Organisms → cellular organisms → Bacteria	3171	Open in IMG/M
3300032174\|Ga0307470_10029344	All Organisms → cellular organisms → Bacteria → Proteobacteria	2597	Open in IMG/M
3300032180\|Ga0307471_101710853	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300032180\|Ga0307471_102088579	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300033412\|Ga0310810_10007563	All Organisms → cellular organisms → Bacteria	12407	Open in IMG/M
3300033432\|Ga0326729_1028816	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	885	Open in IMG/M
3300034257\|Ga0370495_0306119	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.25%
Host-Associated	Host-Associated	18.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Plants	Host-Associated → Plants	18.75%
Aquatic	Environmental → Aquatic	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.64%
Freshwater	Environmental → Aquatic → Freshwater	2.78%
Sediment	Environmental → Aquatic → Sediment	2.08%
Marine	Environmental → Aquatic → Marine	1.39%
Peat	Environmental → Terrestrial → Peat	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.53%
Loam	Environmental → Terrestrial → Soil → Loam	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.47%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.47%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.39%
Sand	Environmental → Terrestrial → Soil → Sand	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.47%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.08%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.47%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.08%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.39%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.39%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.69%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.69%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026015	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401 (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027410	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-12 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08298270	2189573004	Grass Soil	MTMRSAASLALIGAVLVTIVLVVGFVFDLLNVLRGLIPVLRLVTSFIYAFAGVGAVVFLWVFRNAQS
JGI10216J12902_1161862223	3300000956	Soil	MTMRSAASLALTGAVLVTIVLVVGFVFDLLNVRRGLVPALRLVTSFIYAFAGVGAVVFLWVFRNAQS*
JGI10216J12902_1180015202	3300000956	Soil	MFGRRLTCQPSEPRLGRMTMRSAASLALLGAVLVTIVLVVGFILDLLNVLRGLVPALRLVTYFIYALAGVGAVVFLYIFRKAQS*
JGIcombinedJ26739_1005797413	3300002245	Forest Soil	MTMRSAASLALLGAILVAILLVVGFVLDLLNVVRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS*
JGIcombinedJ26739_1008580812	3300002245	Forest Soil	MTMRSAASLALLGAILLMILLVVGFVLDLLNAIRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS*
JGI25612J43240_10186312	3300002886	Grasslands Soil	MTMRSAASLALLGAVLVTILLVVGFVLDLLNVLQGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS*
JGIcombinedJ43975_100617181	3300002899	Soil	MTMRSAASLALIGAVLVTILLVVAFVLDLLNVLGGLVPALRLVTSFIYAFAGVGAVVFLWVFRKAQS*
JGI25617J43924_102445152	3300002914	Grasslands Soil	MTMRSAASLALLGAVLLTILLVIGFVLDLLYVLQGLIPALRLVTSFIYAFAGVGAVVFLCVFRKAQS
soilH2_100004355	3300003324	Sugarcane Root And Bulk Soil	MTMRSAASWALLGAALVAIVLVVGFVLDLLNSVRGLVPALRLVTSFIYAFGSVTAVVFLYVFSRTQP*
Ga0055490_102554581	3300004052	Natural And Restored Wetlands	DYRATAHDGMSLRSAAFLALVGAVLVTILLAVGFVFDLLNVLRGLIPVSRLVTSFIYAFAGVGAVVFLYVFRRAQS*
Ga0062593_1012537441	3300004114	Soil	MTMRSAASLALLGAVLVTIVLVVGFVLDLLNVLRGLVPALRLVASFIYAFAGVTAVVFLYVFRRAQS*
Ga0062593_1012780981	3300004114	Soil	PTRLTCPPPEHRLGRMTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQS*
Ga0062589_1000347072	3300004156	Soil	MRSAASLALLGAVLVTIVLVVGFFLDLLNVLRGLVPALRLVTSFIYAFAGVTAVVFLYVFRRAQS*
Ga0062589_1003401001	3300004156	Soil	MTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQS*
Ga0063356_1044021181	3300004463	Arabidopsis Thaliana Rhizosphere	MTIRSAASLALLGAALVMIVLVVGFVLDLLNVVRGLVPALRLVTSFIYAFASVGAVVFLYVFRKAQP*
Ga0062595_1009735602	3300004479	Soil	MTMRSAASLALLGAVLLMILLVLGFVLDLLNAVRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS*
Ga0065715_105534431	3300005293	Miscanthus Rhizosphere	AASLALIGAVLVAIVLVVGFVLDLLNVVRGLVPALRLVTAFIYAFASVGAVFFLWVFRNGQS*
Ga0065707_109464722	3300005295	Switchgrass Rhizosphere	MTMRSAASLALLGAVLVTIVLVVGFFLDLLNVLRGLVPALRLVTSFIYAFAGVTAVVFLYVFRRAQS*
Ga0070690_1001117712	3300005330	Switchgrass Rhizosphere	MTMRSAASLALLGVVLVAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQS*
Ga0070670_1000312755	3300005331	Switchgrass Rhizosphere	MTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYASAAVTAVVFLCVFRRAQS*
Ga0066388_1022026982	3300005332	Tropical Forest Soil	VTIRSAASLALLGAVLVTILLVVGFMSDLLNVLRGLVPALRLVASFIYAFAGVGAVVFLYVFRRAQS*
Ga0070691_107404252	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALLGAVLVTILLVVGFLLDLLNALRGLVPALRLVTSFIYAFAGVGAVVFLYVFRRAQS*
Ga0070709_100452273	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTMKSAASLALIGAVLVAIVLVVGFVLDLLNVVRGLVRALRLVTAFIYAFASVGAVFFLWVFRNGQS*
Ga0070705_1007479112	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALLGAVLVTILLVVGFVLDLLNVLQGLIPALRLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0070694_1014777191	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALIGAVLVTIVLVVGFVFDLLNVLRGFIPVLRLVTSFIYAFAGVGAVVFLWVFRNAQS*
Ga0070708_1000059106	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALLGAILVAILLVIGFVLDLLNVLQGLIPALRLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0070708_1000312292	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRSAASLALLGAVPVTILLVVGFLLDLLNVLRGLVPALRLVASFIYAFAGVGAVVFLYVFRKAQS*
Ga0070708_1003348823	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RRMTMRSAASLALLGAVLVTILLVVGFVLDLLNVLQGLIPALRLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0070708_1003858721	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTMKSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYAFTSVGAVVFLWVFRN
Ga0070708_1006622211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RRMTMRSAASLALLGAVLVTILLVVGFVLDLLNVLQGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0070662_1002039661	3300005457	Corn Rhizosphere	MTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVF
Ga0070681_107217291	3300005458	Corn Rhizosphere	MTMRSAASLALFGAVLMMILLVVGFFLDLLNVLRGLVPALRLVTSFIYAFAGVTAVVFLYVFRRAQS*
Ga0070706_1000261895	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTMKSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYAFASVGAVVFLWVFRDGQL*
Ga0070707_1000538561	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALIGAVLVMIVLVVGFVLDLLNVFRGLIPALRLVTSFIYAFASVGAVVFLCVFRKAQP*
Ga0070684_1001215033	3300005535	Corn Rhizosphere	MTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAAVFLCVFRRAQS*
Ga0070696_1004484263	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LALLGAGLVTILLAIGFVLDLLNVVRGLVPALKLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0070696_1006401592	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALLGAVLVTILLVVGFVLDLLNVLQGLIPALRLVTSFIYAFAGVGAVVFL
Ga0070693_1001305502	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LALFGAVLMMILLVVGFFLDLLNVLRGLVPALRLVTSFIYAFAGVTAVVFLYVFRRAQS*
Ga0070704_1008530722	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALIGAVLVTIVLVVGLVLDLLNVLRGLVPALRLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0081455_100000802	3300005937	Tabebuia Heterophylla Rhizosphere	MTMRSAASLALIGAVLVTILLVVGLVLDLVNALRGLVPALRLLASLVYAFAGVGAVVFLWVFRNAQS*
Ga0081539_100833972	3300005985	Tabebuia Heterophylla Rhizosphere	MTLRSAASLALLGAVLVAILLVVGFVLDLLNAIRGLIPALRLVPSFVYAFAAVTAVVFLHVFRKTQP*
Ga0075023_1000134423	3300006041	Watersheds	MTMRSAASLALLGAVLLTIMLVIGFVLDLLNVVRGLISALKLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0070715_103415722	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTMKSAASLALIGAVLVAIVLVVGFVLDLLNVVRGLVPALRLVTAFIYAFASVGAVFFLWVFRNGQS*
Ga0070716_1003506013	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALLGAILLMILLVVGFVLDLLNAVRGLIPALKLVTSFIYAFASVGAVVFLWVFRNAQS*
Ga0070765_1003801683	3300006176	Soil	MTMRSAASLALIGAVLVAVVLVVGFVSDLLNALRGLVPALRLVTSFIYAFAGVGAVVFLWVFRNAQS*
Ga0079222_104633132	3300006755	Agricultural Soil	MTVRSAASWALLGAALVAIVLVVGFVLDLLNSVRGLVPALRLVTSFIYAFGSVTAVVFLYVFSRTQP*
Ga0079222_117085952	3300006755	Agricultural Soil	RSAASLALLGVALAAILLVVGLFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQP*
Ga0079221_117551531	3300006804	Agricultural Soil	TRLTCPPPEHRLGRMTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQS*
Ga0079220_113161531	3300006806	Agricultural Soil	MTIRSAASLALLGVALAAILLVVGLFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQ
Ga0075421_1001904012	3300006845	Populus Rhizosphere	MTMRSAASLALLGAVLVAILLLVGLLLDLLNALRGLVPALKVIPSLIYAFAGVTAVVFLYVFRRAQS*
Ga0075425_1002575362	3300006854	Populus Rhizosphere	MTMRSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYGFASVGAVVFLWVFRNAQS*
Ga0075436_1015172251	3300006914	Populus Rhizosphere	MRSAASLALLGAVLVTILLVVGFLLDLLNVLRGLVPALRLVASFIYAFAGVGAVVFLYVFRKAQS*
Ga0099794_100226143	3300007265	Vadose Zone Soil	MTMRSAASLALLGAVLLTILLVIGFVLDLLYVLQGLIPALRLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0105095_103898511	3300009053	Freshwater Sediment	MSLRSAAFLALVGAVLVTILLAVGFVFDLLNVLRGLIPVSRLVTSFIYAFAGVGAVVFLYVFHKAQS*
Ga0105106_113302152	3300009078	Freshwater Sediment	MTIRSAASLALLGAALVMIVLVVGFVLDLLHVVRGLIPALRLVTSFIYAFAGVGAVVFLYVFRKAQP*
Ga0105107_111388931	3300009087	Freshwater Sediment	KGGDYCATAHDGMSLRSAAFLALVGAVLVTILLAVGFVFDLLNVLRGLIPVSRLVTSFIYAFAGVGAVVFLYVFHKAQS*
Ga0099792_100310251	3300009143	Vadose Zone Soil	MTMRSAASLALIGAVLVTIVLVVGFVFDLLNVLRGLIPVLRLVTSFIYAFAGVGAVVFLWVFRNAQS*
Ga0099792_100325344	3300009143	Vadose Zone Soil	MTMRSAASLALLGAVLVTIVLVVGFVLDLLNVLQGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0105243_110007092	3300009148	Miscanthus Rhizosphere	PPEHGLGRMTMRSAASLALLGAVLVTILLVVGFLLDLLNALRGLVPALRLVTSFIYAFAGVGAVVFLYVFRRAQS*
Ga0105243_122894992	3300009148	Miscanthus Rhizosphere	MTMRSAASLALIGAVLVTIVLVVGFAFDLLNVLRGFIPVLRLVTSFIYAFASVGAVVFLCVF
Ga0105092_105230912	3300009157	Freshwater Sediment	MTIRSAASLALLGAVLVMIVLVIGFVLDLLHVVRGLIPALRLVTSFIYAFASVGAVVFLAVFRKAQP*
Ga0105237_101312341	3300009545	Corn Rhizosphere	MTMRSAASLALLGVVLAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQS*
Ga0105249_110468811	3300009553	Switchgrass Rhizosphere	LGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQS*
Ga0126376_101208482	3300010359	Tropical Forest Soil	LGAVLVTILLVLGFLADVVNVLRGLVPALRLVASLIYVFAGVGAVVFLYVFRKAQS*
Ga0126372_101221762	3300010360	Tropical Forest Soil	MRSAAFLALLGAVLVTILLVVGFLSDLLNVLRGLVPALRLVASFIYAFAGVGAVVFLYVFRRAQS*
Ga0126377_108651182	3300010362	Tropical Forest Soil	MTMRSAASLALLGAVLLAIVLVIGFVLDLLNALQGLIPALRMVISFIYAFASVTAVVFLSVFRKSQS*
Ga0126379_103918092	3300010366	Tropical Forest Soil	LGAVLVTILLVLGFLADVVNVLRGLVPALRLVASFIYAFAGVGAVMFLYVFRRAQS*
Ga0134125_115090951	3300010371	Terrestrial Soil	MTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASSIYAFAAVTAVVFLCVFRRAQS*
Ga0134122_108523012	3300010400	Terrestrial Soil	MTMRSAASLALLGAGLVTILLAIGFVLDLLNVVRGLVPALKLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0134121_108181461	3300010401	Terrestrial Soil	MTMRSAASLALLGAILLMILLVVGFVLDLLNAVRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS*
Ga0134121_115570592	3300010401	Terrestrial Soil	MTMRSAASLALLGVVLAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAAVFLCVFRRAQS*
Ga0134123_101098572	3300010403	Terrestrial Soil	MRSAASLALFGAVLMMILLVVGFFLDLLNVLRGLVPALRLVTSFIYAFAGVTAVVFLYVFRRAQS*
Ga0150983_147932082	3300011120	Forest Soil	MTMRSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYAFASVGAVVFLWVFRNGQS*
Ga0137363_101029003	3300012202	Vadose Zone Soil	MTMRSAASLALLGAILLMILLVVGFVLDLLNAVRGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0137387_107369963	3300012349	Vadose Zone Soil	ALIGAVLVTIVLVVGFVFDLLNVLRGLIPVLRLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0137361_112533871	3300012362	Vadose Zone Soil	MTMRSAASLALLGAILLTILLVVGFVRDLLNVLQGLIPALKLVTSFIYTFAGVGAVVFLCVF
Ga0137395_100297805	3300012917	Vadose Zone Soil	RMTMRSAASLALLGAVLLTILLVIGFVLDLLYVLQGLIPALRLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0137396_109915161	3300012918	Vadose Zone Soil	MTMRSAASLALLGAVLVTILLVVGFVRDLLNVLQGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0137419_106609612	3300012925	Vadose Zone Soil	MTMRSAASLALLGAILVAILLVVGFVLDLLNVVRGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS*
Ga0157378_114407401	3300013297	Miscanthus Rhizosphere	PEHRLGRMTMRSAASLALLGVALAAFLLVVGFFLDLLNALRGLVPALRLVASSIYAFAAVTAVVFLCVFRRAQS*
Ga0137418_101272992	3300015241	Vadose Zone Soil	MTMRSAASLALLGAILVAILLVVGFVLDLLNVVRGLIPALKLVTSFIFAFASVGAVVFLCVFRKAQS*
Ga0132258_100164209	3300015371	Arabidopsis Rhizosphere	MTIRSAASLALVGAVLVTIVLVVGFVSDLLNALRGLVPALRLLTSLIYAFAGVVAVVFLWVFRNTQT*
Ga0132258_103575262	3300015371	Arabidopsis Rhizosphere	MTMRSAASLAMIGAVLLTIVLVVGFVFDLLNVLRGLIPVLRLVTSFIYAFAGVGAVVFLWVCRNAQS*
Ga0132258_126096752	3300015371	Arabidopsis Rhizosphere	MTMRGAASLALLGAVLVAILLVVGFVLDLVNALRGLIPALRLVASFIYAFAAVAAVLFLHVFRKAQP*
Ga0132257_1031209461	3300015373	Arabidopsis Rhizosphere	MTMRSAASLALIGAVLLTIVLVVGFVFDLLNVLRGLIPVLRLVTSFIYAFAGVGAVVFLWVFRNAQS*
Ga0184623_100053121	3300018056	Groundwater Sediment	MSLRSAASLALLGAVLVMIVLVVGFVLDLLNVLRGLIPALRLVTSFIYAFAGVGAVVFLYVFRKAQP
Ga0190265_100163808	3300018422	Soil	MTMRSAASLALIGAVLVMIVLVVGFVLDLLNVFRGLIPALRLVTSFIYAFASVGAVVFLCVFRKAQP
Ga0193723_10059983	3300019879	Soil	MTMRSAASLALLGAVLVTIVLVVGFILDLLNVLRGLVPALRLVTSFIYAFAGVTAVVFLYVFRRAQS
Ga0193707_11449141	3300019881	Soil	MTMRSAASLALLGAVLLMILLVIGFVLDLLNAVRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS
Ga0206356_106929782	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQS
Ga0193719_100695452	3300021344	Soil	MTMRSAASLALFGAVLVAILLVVGFFLDLLNVLRGLVPALRLVASFIYAFAGVTAVVFLYVFRRGQS
Ga0210384_100312062	3300021432	Soil	MKMRSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYAFAGVGAVVFLWEFRNAQS
Ga0210384_100497243	3300021432	Soil	MTMRSAASLALIGAVLVAVVLVVGFVSDLLNALRGLVPALRLVTSFIYAFAGVGAVVFLWVFRNAQS
Ga0210409_103396823	3300021559	Soil	MTMRSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYAFASVGAVVFLWVFRNAQS
Ga0207682_106330252	3300025893	Miscanthus Rhizosphere	SLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFLCVFRRAQS
Ga0207642_107150131	3300025899	Miscanthus Rhizosphere	MRSAASLALLGAVLVTIVLVVGFFLDLLNVLRGLVPALRLVTSFIYAFAGVGAVVFLWVFRNAQS
Ga0207645_106858362	3300025907	Miscanthus Rhizosphere	MRSAASLALLGAVLVTIVLVVGFFLDLLNVLRGLVPALRLITSFIYAFAGVTAVVFLYVFRRAQS
Ga0207684_100132172	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRSAASLALLGAVPVTILLVVGFLLDLLNVLRGLVPALRLVASFIYAFAGVGAVVFLYVFRKAQS
Ga0207684_100398545	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTMKSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYAFASVGAVVFLWVFRDGQL
Ga0207684_100783153	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRSAASLALLGAILVAILLVIGFVLDLLNVLQGLIPALRLVTSFIYAFAGVGAVVFLCVFRKAQS
Ga0207707_113250631	3300025912	Corn Rhizosphere	MTMRSAASLALFGAVLMMILLVVGFFLDLLNVLRGLVPALRLVTSFIYAFAGVTAVVFLYVFRRAQS
Ga0207693_102153321	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTMKSAASLALIGAVLVAIVLVVGFVLDLLHVIRGLVPALRLVTSFIYAFASVGAVVFLWVSRNGQS
Ga0207660_106233632	3300025917	Corn Rhizosphere	MTMRSAASLALLGAVLVTILLAIGFVLDLVNVVRGLVPALKLVTSFIYAFAGVGAVVFLCVFRKAQS
Ga0207646_112556421	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRSAASLALLGAVLVTILLVVGFVLDLLNVLQGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS
Ga0207659_118014292	3300025926	Miscanthus Rhizosphere	AASLALLGAVLVAILLLVGLLLDLLNALRGLVPALKVIPSLIYAFAGVTAVVFLYVFRRAQS
Ga0207686_116320361	3300025934	Miscanthus Rhizosphere	MRSAASLALLGAVLVTIVLVVGFFLDLLNVLRGLVPALRLVTSFIYAFAGVTAVVFLYVFRRAQS
Ga0207709_112549261	3300025935	Miscanthus Rhizosphere	PPEHRLGRMTMRSAASLALLGAVLVTILLVVGFLLDLLNALRGLVPALRLVTSFIYAFAGVGAVVFLYVFRRAQS
Ga0207689_100210352	3300025942	Miscanthus Rhizosphere	MTMRSAASLALLGAVLVTIVLVVGFVLDLLNVLRGLVPALRLVASFIYAFAGVTAVVFLYVFRRAQS
Ga0210102_11289003	3300025971	Natural And Restored Wetlands	GDYRATAHDGMSLRSAAFLALVGAVLVTILLAVGFVFDLLNVLRGLIPVSRLVTSFIYAFAGVGAVVFLYVFRRAQS
Ga0208286_10057401	3300026015	Rice Paddy Soil	MTMRSAASLALLGAVLVTILLVVGFLLDLLNALRGLVPALRLVTSFIYAFAGVGAVVFLYVFRRAQS
Ga0207698_118024162	3300026142	Corn Rhizosphere	MTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAGVVAVVFLWVFRNAQS
Ga0209438_10184002	3300026285	Grasslands Soil	MTMRSAASLALLGAVLVTILLVVGFVLDLLNVFQGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS
Ga0209438_10567972	3300026285	Grasslands Soil	MTMRSAASLALIGAVLVMIVLVVGFVLDLLNVFRGLIPALRLVTSFIYAFASVGAVAFLCVFRKAQP
Ga0257170_10051993	3300026351	Soil	MTMRSAASLALLGAVLVTILLVVGFVLDLLNVLQGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQ
Ga0257163_10578192	3300026359	Soil	MTMRSAASLALLGAILVAILLVVGFVLDLLNVVRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS
Ga0257157_10433002	3300026496	Soil	MTMRSAASLALLGAILVAILLVVGFVLDLLNAVRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS
Ga0257168_10102642	3300026514	Soil	MTMRSAASLALLGAVLVTILLVVGFVRDLLNVLQGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS
Ga0209806_12268682	3300026529	Soil	MTMRSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYAFAGVGAVVFLWAFRNA
Ga0179587_101101703	3300026557	Vadose Zone Soil	MTMRSAASLALLGAILLMILLVVGFVLDLMNAIRGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS
Ga0207541_1054781	3300027410	Soil	MTMRSAASLALLGVALAAILLVVGFFLDLLNALRGLVPALRLVASFIYAFAAVTAVVFL
Ga0209329_10285112	3300027605	Forest Soil	MTMRSAASLALLGAILLMILLVVGFVLDLLNAVRGLIPALKLVTSFIYAFAGVGAVVFLCVFRKAQS
Ga0209328_101757881	3300027727	Forest Soil	MTMKSAASLALLGAILVAILLVVGFVLDLLNVVRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS
Ga0209073_104038382	3300027765	Agricultural Soil	MTVRSAASWALLGAALVAIVLVVGFVLDLLNSVRGLVPALRLVTSFIYAFGSVTAVVFLYVFSRTQP
Ga0209068_100418263	3300027894	Watersheds	MTMRSAASLALLGAVLLTIMLVIGFVLDLLNVVRGLISALKLVTSFIYAFAGVGAVVFLCVFRKAQS
Ga0209382_102980292	3300027909	Populus Rhizosphere	MTMRSAASLALLGAVLVAILLLVGLLLDLLNALRGLVPALKVIPSLIYAFAGVTAVVFLYVFRRAQS
Ga0209526_101139462	3300028047	Forest Soil	MTMRSAASLALLGAILLMILLVVGFVLDLLNAIRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS
Ga0209526_104169381	3300028047	Forest Soil	MTMKSAASLALIGAVLVTIVLVVGFVFDLLNVLRGLVPALRLVTSFIYAFAGVGAVVFLWVFRNAQS
Ga0222749_100513764	3300029636	Soil	TMRSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYAFAGVGAVVFLWEFRNAQS
(restricted) Ga0255311_10096662	3300031150	Sandy Soil	MTMRSAASLALLGAALVTILLIVGFLLDLLNALRGLVPALRLVTSFIYAFAGVGAVVFLHAFRRAQS
(restricted) Ga0255310_100091543	3300031197	Sandy Soil	MSLRSAAFLALVGAVLVTILLVIGFVFDLLNVLRGLIPVSRLVTSFIYAFAGVGAVVFLYVFHKAQS
Ga0310888_109217402	3300031538	Soil	MTMRSAASLALLGAVLVTILLVVGFLLDLLNALRGLVPALRLVTSLIYAFAGVGAVVFLYVFRRAQS
Ga0307469_100071543	3300031720	Hardwood Forest Soil	MTMRSAASLALIGAVLVTIVLVVGFVFDLLNVLRGFIPVLRLVTSFIYAFAGVGAVVFLWVFRNAQS
Ga0307469_102006022	3300031720	Hardwood Forest Soil	MTMRSAASLALLGAVLVTIVLVVGFFLDLLNVLRGLVPALRLVTSFIYAFAGVTAVVFLYVFRRAQS
Ga0307468_1001429913	3300031740	Hardwood Forest Soil	MTMKSAASLALIGAVLVAIVLVVGFVLDLLNVVRGLVPALRLVTAFIYAFASVGAVFFLWVFRDGQS
Ga0310900_111988952	3300031908	Soil	MTMRSAASLALIGAVLVTIVLVVGFVLDLLNALQGLVPALRLITSLIYAFAGVVAVVFLWVFRNAQS
Ga0307479_100459293	3300031962	Hardwood Forest Soil	MTMRSAAFLALIGAVLVAVVLVVGFVSDLLNALRGLVPALRLVTSFIFAFAGVGAVVFLWVFRNAQS
Ga0307479_100540133	3300031962	Hardwood Forest Soil	MTMKSAASLALIGAVLVAIVLVVGFVLDLLNVIRGLVPALRLVTSFIYAFASVGAVVLLWVFRNGQS
Ga0307470_100171453	3300032174	Hardwood Forest Soil	MTMRSAASLALIGAVLVAIVLVIGFVLDLLNVLRGLIPALRLVTSFIYAFASVAAVVFLAVFRKAQP
Ga0307470_100293443	3300032174	Hardwood Forest Soil	MTMRSAASLALLGAILLMILLVVGFVLDLLNAVRGLIPALKLVTSFIYAFASVGAVVFLCVFRKAQS
Ga0307471_1017108531	3300032180	Hardwood Forest Soil	MTMRSAASLALIGAVLVTILLVVGFVLDLLNVLRGLIPALRLVTSFIYAFAGVGAVVFLWVFRNAQS
Ga0307471_1020885792	3300032180	Hardwood Forest Soil	MTMRSAASLALIGAVLVTVVLVVGFVFDLLNALRGLVPALRLVTSFIYAFAGVGAVVFLWVFRNAQS
Ga0310810_100075638	3300033412	Soil	MTMRSAASLALLGAVLVTILLVVGFLLDLLSALRGLVPALRSVTSFIYAFAGVGAVVFLYVFRRAQS
Ga0326729_10288162	3300033432	Peat Soil	MSLRSAALLALVGAVLATILLAVGFVFDLLNVLRGLIPVSRVVTSFIFAFAGVGAVVFLYVFHRAQP
Ga0370495_0306119_3_197	3300034257	Untreated Peat Soil	QNAARLALVGAVLVTILLVVGFVVDLLNVLRGLIPALRVVTSFIYAFAGVGAVVFLYVFHKARS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters