Metagenome / Metatranscriptome Family F051460

Basic Information
Family ID	F051460
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	56 residues
Representative Sequence	MMHAEPGLADTQKLEIPKDLMSALTSGAHKPRTDYGIEALKPSFFGRLMEKLIGPKN
Number of Associated Samples	109
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.32 %
% of genes near scaffold ends (potentially truncated)	25.69 %
% of genes from short scaffolds (< 2000 bps)	79.86 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Most Common Taxonomy
Group	Bacteria (52.778 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.278 % of family members)
Environment Ontology (ENVO)	Unclassified (38.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.750 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.24% β-sheet: 0.00% Coil/Unstructured: 71.76%
Feature Viewer

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Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00498	FHA	23.61
PF01523	PmbA_TldD	12.50
PF13401	AAA_22	6.25
PF02222	ATP-grasp	0.69
PF01124	MAPEG	0.69
PF00795	CN_hydrolase	0.69
PF00731	AIRC	0.69
PF01494	FAD_binding_3	0.69
PF13592	HTH_33	0.69
PF04751	DUF615	0.69
PF13632	Glyco_trans_2_3	0.69
PF02798	GST_N	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	12.50
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.39
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.69
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.69
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.69
COG3028	Ribosomal 50S subunit-associated protein YjgA, DUF615 family	Translation, ribosomal structure and biogenesis [J]	0.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.78 %
Unclassified	root	N/A	47.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.78 %
Unclassified	root	N/A	47.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.78 %
Unclassified	root	N/A	47.22 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.00 %
Unclassified	root	N/A	47.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.03 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.69 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.08 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.08 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.08 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.69 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.08 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.08 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.69 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.08 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.08 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.69 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10049373	All Organisms → cellular organisms → Bacteria → Proteobacteria	2355	Open in IMG/M
3300002245\|JGIcombinedJ26739_100505926	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300003316\|rootH1_10024853	Not Available	1688	Open in IMG/M
3300004081\|Ga0063454_101753540	Not Available	542	Open in IMG/M
3300005178\|Ga0066688_10544271	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300005238\|Ga0073692_1003861	All Organisms → cellular organisms → Bacteria → Proteobacteria	3047	Open in IMG/M
3300005329\|Ga0070683_100739651	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300005330\|Ga0070690_100402644	Not Available	1005	Open in IMG/M
3300005332\|Ga0066388_102003100	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300005335\|Ga0070666_10130654	All Organisms → cellular organisms → Bacteria → Proteobacteria	1745	Open in IMG/M
3300005335\|Ga0070666_10617677	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300005455\|Ga0070663_100925141	Not Available	754	Open in IMG/M
3300005529\|Ga0070741_10031863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7301	Open in IMG/M
3300005529\|Ga0070741_10670513	Not Available	918	Open in IMG/M
3300005529\|Ga0070741_11251983	Not Available	623	Open in IMG/M
3300005529\|Ga0070741_11352589	Not Available	594	Open in IMG/M
3300005533\|Ga0070734_10526216	Not Available	673	Open in IMG/M
3300005534\|Ga0070735_10006397	All Organisms → cellular organisms → Bacteria → Proteobacteria	9564	Open in IMG/M
3300005538\|Ga0070731_10719428	Not Available	663	Open in IMG/M
3300005539\|Ga0068853_100387181	Not Available	1306	Open in IMG/M
3300005542\|Ga0070732_10249900	Not Available	1062	Open in IMG/M
3300005542\|Ga0070732_10557268	Not Available	695	Open in IMG/M
3300005548\|Ga0070665_100066115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3627	Open in IMG/M
3300005937\|Ga0081455_10633381	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300006164\|Ga0075441_10331048	Not Available	554	Open in IMG/M
3300006172\|Ga0075018_10665020	Not Available	560	Open in IMG/M
3300006354\|Ga0075021_10049177	All Organisms → cellular organisms → Bacteria → Proteobacteria	2435	Open in IMG/M
3300006638\|Ga0075522_10215045	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300006864\|Ga0066797_1122385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	910	Open in IMG/M
3300006893\|Ga0073928_10368560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1059	Open in IMG/M
3300006893\|Ga0073928_10423413	Not Available	969	Open in IMG/M
3300007788\|Ga0099795_10583863	Not Available	530	Open in IMG/M
3300009093\|Ga0105240_10534190	Not Available	1300	Open in IMG/M
3300009093\|Ga0105240_11837965	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300009143\|Ga0099792_10468965	Not Available	783	Open in IMG/M
3300009174\|Ga0105241_10523727	Not Available	1060	Open in IMG/M
3300009177\|Ga0105248_10033403	All Organisms → cellular organisms → Bacteria → Proteobacteria	5747	Open in IMG/M
3300009177\|Ga0105248_12680998	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300009545\|Ga0105237_10836718	Not Available	927	Open in IMG/M
3300009545\|Ga0105237_11155772	Not Available	781	Open in IMG/M
3300009545\|Ga0105237_11734496	Not Available	632	Open in IMG/M
3300010371\|Ga0134125_10095286	All Organisms → cellular organisms → Bacteria → Proteobacteria	3313	Open in IMG/M
3300010375\|Ga0105239_12852911	Not Available	564	Open in IMG/M
3300011120\|Ga0150983_11868749	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300012206\|Ga0137380_11618082	Not Available	532	Open in IMG/M
3300012207\|Ga0137381_10524357	All Organisms → cellular organisms → Bacteria → Proteobacteria	1033	Open in IMG/M
3300012212\|Ga0150985_112676388	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300012212\|Ga0150985_117653616	Not Available	597	Open in IMG/M
3300012359\|Ga0137385_10036188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4426	Open in IMG/M
3300012469\|Ga0150984_116845997	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300012469\|Ga0150984_121905357	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300012683\|Ga0137398_10235961	All Organisms → cellular organisms → Bacteria → Proteobacteria	1215	Open in IMG/M
3300012685\|Ga0137397_11289454	Not Available	520	Open in IMG/M
3300012904\|Ga0157282_10055293	Not Available	985	Open in IMG/M
3300012909\|Ga0157290_10346162	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300012924\|Ga0137413_10041693	All Organisms → cellular organisms → Bacteria → Proteobacteria	2602	Open in IMG/M
3300012924\|Ga0137413_10156075	All Organisms → cellular organisms → Bacteria → Proteobacteria	1496	Open in IMG/M
3300012924\|Ga0137413_10651513	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300012925\|Ga0137419_10558265	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300012927\|Ga0137416_10109875	All Organisms → cellular organisms → Bacteria → Proteobacteria	2090	Open in IMG/M
3300012929\|Ga0137404_10317195	Not Available	1356	Open in IMG/M
3300012929\|Ga0137404_10801404	Not Available	856	Open in IMG/M
3300012930\|Ga0137407_10190081	Not Available	1837	Open in IMG/M
3300013296\|Ga0157374_10888931	Not Available	908	Open in IMG/M
3300013307\|Ga0157372_10553161	All Organisms → cellular organisms → Bacteria → Proteobacteria	1341	Open in IMG/M
3300014168\|Ga0181534_10077341	All Organisms → cellular organisms → Bacteria → Proteobacteria	1650	Open in IMG/M
3300014201\|Ga0181537_10582215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	764	Open in IMG/M
3300014968\|Ga0157379_10194173	Not Available	1835	Open in IMG/M
3300014968\|Ga0157379_11513572	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300014969\|Ga0157376_10348228	Not Available	1417	Open in IMG/M
3300014969\|Ga0157376_10898976	Not Available	903	Open in IMG/M
3300015242\|Ga0137412_10249309	Not Available	1405	Open in IMG/M
3300015242\|Ga0137412_11049454	Not Available	580	Open in IMG/M
3300015264\|Ga0137403_10407552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1239	Open in IMG/M
3300019270\|Ga0181512_1369794	Not Available	794	Open in IMG/M
3300020199\|Ga0179592_10284186	Not Available	737	Open in IMG/M
3300020580\|Ga0210403_11455279	Not Available	517	Open in IMG/M
3300021168\|Ga0210406_10269084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1394	Open in IMG/M
3300021168\|Ga0210406_10496825	Not Available	965	Open in IMG/M
3300021168\|Ga0210406_11118904	Not Available	578	Open in IMG/M
3300021170\|Ga0210400_11481690	Not Available	539	Open in IMG/M
3300021384\|Ga0213876_10142446	Not Available	1275	Open in IMG/M
3300021384\|Ga0213876_10467406	Not Available	671	Open in IMG/M
3300022533\|Ga0242662_10278258	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300022557\|Ga0212123_10357596	All Organisms → cellular organisms → Bacteria → Proteobacteria	996	Open in IMG/M
3300022726\|Ga0242654_10227674	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300022726\|Ga0242654_10434881	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300022894\|Ga0247778_1022080	Not Available	1509	Open in IMG/M
3300025862\|Ga0209483_1201851	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300025900\|Ga0207710_10001594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11112	Open in IMG/M
3300025900\|Ga0207710_10155366	Not Available	1112	Open in IMG/M
3300025903\|Ga0207680_11115323	Not Available	564	Open in IMG/M
3300025913\|Ga0207695_11002089	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300025913\|Ga0207695_11224043	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300025914\|Ga0207671_10741532	Not Available	780	Open in IMG/M
3300025931\|Ga0207644_10428637	Not Available	1084	Open in IMG/M
3300025944\|Ga0207661_10666609	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300025949\|Ga0207667_10384136	Not Available	1430	Open in IMG/M
3300026078\|Ga0207702_10465661	Not Available	1228	Open in IMG/M
3300026088\|Ga0207641_12359595	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300026273\|Ga0209881_1158846	Not Available	564	Open in IMG/M
3300027603\|Ga0209331_1173256	Not Available	504	Open in IMG/M
3300027714\|Ga0209815_1142623	Not Available	769	Open in IMG/M
3300027738\|Ga0208989_10006707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3896	Open in IMG/M
3300027738\|Ga0208989_10290460	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300027826\|Ga0209060_10516738	Not Available	541	Open in IMG/M
3300027894\|Ga0209068_10189880	Not Available	1126	Open in IMG/M
3300027895\|Ga0209624_10913510	Not Available	572	Open in IMG/M
3300027903\|Ga0209488_10082045	All Organisms → cellular organisms → Bacteria → Proteobacteria	2400	Open in IMG/M
3300027986\|Ga0209168_10027251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3180	Open in IMG/M
3300028047\|Ga0209526_10016729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5086	Open in IMG/M
3300028047\|Ga0209526_10449228	Not Available	848	Open in IMG/M
3300028379\|Ga0268266_10056321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3382	Open in IMG/M
3300028379\|Ga0268266_10372292	Not Available	1345	Open in IMG/M
3300028536\|Ga0137415_10000005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	203540	Open in IMG/M
3300028536\|Ga0137415_10148505	All Organisms → cellular organisms → Bacteria → Proteobacteria	2181	Open in IMG/M
3300028786\|Ga0307517_10299372	All Organisms → cellular organisms → Bacteria → Proteobacteria	903	Open in IMG/M
3300029636\|Ga0222749_10428382	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300030521\|Ga0307511_10083542	All Organisms → cellular organisms → Bacteria → Proteobacteria	2224	Open in IMG/M
3300030969\|Ga0075394_11406826	Not Available	786	Open in IMG/M
3300030969\|Ga0075394_11496183	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300030969\|Ga0075394_11868739	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300031231\|Ga0170824_107379995	Not Available	1017	Open in IMG/M
3300031231\|Ga0170824_114644037	Not Available	1319	Open in IMG/M
3300031232\|Ga0302323_100291325	All Organisms → cellular organisms → Bacteria → Proteobacteria	1689	Open in IMG/M
3300031234\|Ga0302325_11169135	All Organisms → cellular organisms → Bacteria → Proteobacteria	1028	Open in IMG/M
3300031446\|Ga0170820_14438922	All Organisms → cellular organisms → Bacteria → Proteobacteria	1423	Open in IMG/M
3300031446\|Ga0170820_16938960	Not Available	910	Open in IMG/M
3300031469\|Ga0170819_12079374	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300031474\|Ga0170818_110013309	Not Available	979	Open in IMG/M
3300031474\|Ga0170818_113325225	All Organisms → cellular organisms → Bacteria → Proteobacteria	2323	Open in IMG/M
3300031507\|Ga0307509_10000005	All Organisms → cellular organisms → Bacteria → Proteobacteria	435959	Open in IMG/M
3300031616\|Ga0307508_10060628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3345	Open in IMG/M
3300031715\|Ga0307476_10029605	All Organisms → cellular organisms → Bacteria	3630	Open in IMG/M
3300031753\|Ga0307477_10231505	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300031754\|Ga0307475_10254696	Not Available	1407	Open in IMG/M
3300031962\|Ga0307479_10053199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3897	Open in IMG/M
3300031962\|Ga0307479_12059650	Not Available	519	Open in IMG/M
3300032783\|Ga0335079_10467407	Not Available	1350	Open in IMG/M
3300032955\|Ga0335076_10101738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	2801	Open in IMG/M
3300033180\|Ga0307510_10000006	All Organisms → cellular organisms → Bacteria → Proteobacteria	566474	Open in IMG/M
3300033180\|Ga0307510_10001491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	25837	Open in IMG/M
3300033486\|Ga0316624_11970468	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.06%
Host-Associated	Host-Associated	31.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.42%
Plants	Host-Associated → Plants	31.94%
Aquatic	Environmental → Aquatic	7.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.83%
Roots	Host-Associated → Plants → Roots	5.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.86%
Freshwater	Environmental → Aquatic → Freshwater	2.08%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.08%
Sediment	Environmental → Aquatic → Sediment	2.08%
Marine	Environmental → Aquatic → Marine	1.39%
Peat	Environmental → Terrestrial → Peat	1.39%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.69%
Rhizome	Host-Associated → Plants → Rhizome	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.89%
Loam	Environmental → Terrestrial → Soil → Loam	9.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified	5.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.08%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.08%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.08%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.08%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.39%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.33%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.86%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	4.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.08%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.39%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.39%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.39%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.39%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.39%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.39%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.69%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005238	Microbial communities on the surface of aged kaolinite enhanced biochar from soil in Sydney, Australia	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100493734	3300001661	Forest Soil	MMHAEPALADTQKLEIPTELMRALNSGAHKPKTDYGIEALKPSLLGRLIEKLLGPKN*
JGIcombinedJ26739_1005059261	3300002245	Forest Soil	MMHAEPALADTQKLEIPTELMRALNSGAHKPKTDYGIEALKPSLLGRLIEKLIGPKN*
rootH1_100248533	3300003316	Sugarcane Root And Bulk Soil	MMPTDGLAETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPKN*
Ga0063454_1017535401	3300004081	Soil	MMHAEPSLADTQKLEVPHDLVSALGTHKPKTDYGIESLKPSFFGRLIEKLLGPKN*
Ga0066688_105442712	3300005178	Soil	MMHSEPGLADTQKLQIPQDLVSALGHHKPKTDYGIEALKPSFFGRLVEKLIGPRN*
Ga0073692_10038612	3300005238	Soil	MMPTDGLAETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPKN*
Ga0070683_1007396512	3300005329	Corn Rhizosphere	MPAEHAALADTQKLQVPTELMSALSSSAHKPKIDYGIEALKPSFFSRFMEKLIGPKK*
Ga0070690_1004026441	3300005330	Switchgrass Rhizosphere	LLSVEEYMMHSEPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPRN*
Ga0066388_1020031002	3300005332	Tropical Forest Soil	MMPAEPALADTQKLQIPTELMSALNSGAHKLKTDYGIEALKPSFFGRLVEKLLGPKK*
Ga0070666_101306541	3300005335	Switchgrass Rhizosphere	MMHAEPALADTQKLEIPMELRSALNSGAHKPKTDYGIEALKPSFFGRLIEKLLGPKS*
Ga0070666_106176771	3300005335	Switchgrass Rhizosphere	MMHSEPGLADTQKLKIPQDLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPRN*
Ga0070663_1009251412	3300005455	Corn Rhizosphere	MMHSEPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPRN*
Ga0070741_100318633	3300005529	Surface Soil	MHAEPALTDTQKLQLPPDLVSALAKRPRKPELDYGIESLKPSLFSRLIEKLIGPKN*
Ga0070741_106705133	3300005529	Surface Soil	DWTMHAEPALADTQKLQIPPELASALAKRAHKPEMDYAIEAMKPSLFGRLIEKLIRPKN*
Ga0070741_112519831	3300005529	Surface Soil	MMHGEPALNDTQKLQIPTELMSALNSGPHKPKLDYGIEALKPSLFGRLVEKLIGPKK*
Ga0070741_113525891	3300005529	Surface Soil	MHAEPSLTDTQKLQLPPDLVSALAKRPRKPEMDYGIEALKPSLFGRLIEKLIGPKN*
Ga0070734_105262162	3300005533	Surface Soil	MPPESAALADTQKLQIPHDLMSALNSGGAKKTDYGIESLKPSFFGRLMEKLIGPKGR*
Ga0070735_1000639711	3300005534	Surface Soil	MHAESLEDTQKLVLPQDLVSALNSRAQKPKVDYGIEALKPSLFGRFVEKLIGPKR*
Ga0070731_107194282	3300005538	Surface Soil	MMHAEPTLADTQKLEVPKELISVLNSGAHKPKTDYGIEALKPSLLGRLIEKLIGPKN*
Ga0068853_1003871813	3300005539	Corn Rhizosphere	MMHSEPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPRN*
Ga0070732_102499002	3300005542	Surface Soil	MMRAEPALADTQKFQVPTELMTALNSGAHKPKTDYGIEALKPSFFDRLVEKLLGPKK*
Ga0070732_105572682	3300005542	Surface Soil	MSAQPIMAENDKLELPQDLVAALNNRAHKPKTDYGIEALKPSLFGRLIEKLIGPRN*
Ga0070665_1000661153	3300005548	Switchgrass Rhizosphere	MMMPAETGLAETQKLHIPQDLVSALGAHKPKTDYGIEALKPSFFGRLMEKLIGPKN*
Ga0081455_106333811	3300005937	Tabebuia Heterophylla Rhizosphere	MHAEPALADTQKLQIPTELVSALNSGTHKPKIDYGIEALKPSFFGRLMEKLIGPKK*
Ga0075441_103310482	3300006164	Marine	MPAETGLAETQTFQIPQDLVSALGTHKPKTDYGIEALKPSFFGRLMEKLI
Ga0075018_106650201	3300006172	Watersheds	MMHADPALADTQKLEIPHDLMSALKSGATQKTDYGIEALRPSFFGRLIEKLIGPKN*
Ga0075021_100491772	3300006354	Watersheds	MMHADSALADTQKLEIPKDLVSALGSHNHKTDYGIEAMKPSFFGRLIEKLIGPRN*
Ga0075522_102150452	3300006638	Arctic Peat Soil	MHADPTLADTQKLEIPQELVSALNSRTHKPVTDFGIEALKPSLFGRLIEKLIGPKN*
Ga0066797_11223852	3300006864	Soil	MMHAQSTLDDTQKLQLPQDLVAALNSRSHKPGTDYGIEALKPSLFGRFVEKLIGPKK*
Ga0073928_103685602	3300006893	Iron-Sulfur Acid Spring	MMHAEPALADTQKLEIPKELASALGSHKPKTDYGIEALKPSFFSRLIEKLIGPRN*
Ga0073928_104234133	3300006893	Iron-Sulfur Acid Spring	FHSQVEDCMMHADPALADTQKLEIPKDLMSALNSGAHRPKTDYGIEALKPSFLGRLMEKLLGPKN*
Ga0099795_105838631	3300007788	Vadose Zone Soil	MMHAEPALADTQKLEIPTELRSALNSGAHKPKTDYGIEALKPSLLGRLI
Ga0105240_105341903	3300009093	Corn Rhizosphere	MMPAETGLAETQTLQIPQDLVNALGTHKPKTDYGIEALKPSFFGRLMEKLIGPKN*
Ga0105240_118379651	3300009093	Corn Rhizosphere	EDCPMPESALADTQKLQIPTELVSALNSGTHKPKVDYGIEALKPSFFGRLMEKLLGPKK*
Ga0099792_104689651	3300009143	Vadose Zone Soil	MHAEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIESLKPSFFGRLMEKLLGPKN*
Ga0105241_105237273	3300009174	Corn Rhizosphere	YMMHSEPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPRN*
Ga0105248_100334032	3300009177	Switchgrass Rhizosphere	MMHSEPGLADTQKLKIPEDLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPRN*
Ga0105248_126809981	3300009177	Switchgrass Rhizosphere	SFYFQLRIYMMHSEPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPRN*
Ga0105237_108367182	3300009545	Corn Rhizosphere	MPESALADTQKLQIPTELVSALNSGTHKPKVDYGIEALKPSFFGRLMEKLLGPKK*
Ga0105237_111557721	3300009545	Corn Rhizosphere	MHSEPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPRN*
Ga0105237_117344961	3300009545	Corn Rhizosphere	MMHAEPTLADTQKLEVPKELLSVLNSGAHKPKTDYGIEALKPSLFGRLIEKLIGPKN*
Ga0126370_117776681	3300010358	Tropical Forest Soil	MKHADPALADTQKLEIPTELMSALNNGAHKPKMDYGIEGLKPSFF
Ga0134125_100952863	3300010371	Terrestrial Soil	MHAEPALADTQKLQIPPDLASALAKHSNKPEMDYAIEAMKPSLFGRLIEKLIGPKN*
Ga0105239_128529112	3300010375	Corn Rhizosphere	MMHTEPGLAETQKLQIPQDLVSALGQHKPKTDYGIESLKPSFFGRLVEKLIGPRN*
Ga0150983_118687491	3300011120	Forest Soil	MHAEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIEALKPSFFGRLIERLLGPKN*
Ga0137380_116180821	3300012206	Vadose Zone Soil	MMPAEPTLADTQKLEIPTELRSVLNSGAHRPKTDYGIEALKPSFFGKLIEKLIGPKN*
Ga0137381_105243571	3300012207	Vadose Zone Soil	MMPAEPTLADTQKLEIPTELMSVLNSGAHRPKTDYGIEALKPSFFGKLIEKLIGPKN*
Ga0150985_1126763882	3300012212	Avena Fatua Rhizosphere	MHAEPALADTQKLQVPTELMSALSSGAHRPKIDYGIEALKPSFFERFMAKLIGPRK*
Ga0150985_1176536161	3300012212	Avena Fatua Rhizosphere	MMHSEPGLADTQKLEIPQDLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPRN*
Ga0137385_100361884	3300012359	Vadose Zone Soil	MMPAEPTLADTQKLEIPTELMSVLNSGAHRPKTDYGIEALKPSFFGRLIEKLIGPKN*
Ga0150984_1168459971	3300012469	Avena Fatua Rhizosphere	MMHTEPGLAETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPRN*
Ga0150984_1219053572	3300012469	Avena Fatua Rhizosphere	MMHAEPSLADTQKLEIPHDLVSALGTHKPKTDYGIEALKPSFFGRLIEKLLGPKN*
Ga0137398_102359612	3300012683	Vadose Zone Soil	MMHAEPALADTQKLEIPTELRSALNSGAHKPKTDYGIEALKPSLLGRLIEK
Ga0137397_112894542	3300012685	Vadose Zone Soil	MMHAEPALADTQKLEIPMELRSALNSGAHKPKTDYGIEALKPSLLGRLIEKLLGPKN*
Ga0157282_100552933	3300012904	Soil	MPSDGLADTQKLQIPQDLVSALGTHKPKTDYGIEAMKPSFFGRLVEKLIGPKN*
Ga0157290_103461621	3300012909	Soil	TQKLQIPQDLVSALGTHKPKTDYGIEAMKPSFFGRLVEKLIGPKN*
Ga0137413_100416933	3300012924	Vadose Zone Soil	MMHAEPGLADTQKLEIPKDLMTALSSGAHKPRTDYGIEALKPSFFGRLVEKLIGPKN*
Ga0137413_101560752	3300012924	Vadose Zone Soil	MMPAETGLAETQTLHIPQDLVSALGTHKPKTDYGIEALKPSFFGRLMEKLIGPKN*
Ga0137413_106515133	3300012924	Vadose Zone Soil	DTQKLEIPTELISVLKSGAHKPKTDYGIEALKPSLFGRLIEKLIGPKN*
Ga0137419_105582651	3300012925	Vadose Zone Soil	MMHAEPGLADTQKLEIPKDLMSALTSGAHKPRTDYGIEALKPSFFGRLMEKLIGPKN*
Ga0137416_101098751	3300012927	Vadose Zone Soil	MMHAEPTLADTQKLEIPTELISVLNSGAHKPKTDYGIEALKPSLLGRLIEKLIGPKN*
Ga0137404_103171951	3300012929	Vadose Zone Soil	MMHAEPTLADTQKLEVPTELMRVLNSGAHKSKTDYGIEALKPSLLGRLIEKLIGPKN*
Ga0137404_108014041	3300012929	Vadose Zone Soil	MMHAEPALADTQKLEIPKDLMSALTSGAHKPRTDYGIEALKPSFFGRLMEKLLGSMN*
Ga0137407_101900813	3300012930	Vadose Zone Soil	MMHAEPTLADTQKLEIPTELISVLNSGAHKPKTDYGIEALKPSFFGRLIEKLIGPKN*
Ga0157374_108889311	3300013296	Miscanthus Rhizosphere	FQLRIYMMHSEPGLADTQKLKIPQDLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPRN*
Ga0157372_105531612	3300013307	Corn Rhizosphere	MMHTEPGLAETQKLQVPQDLVSALGQHKPKTDYGIEALKPSFFGRLIEKLIGPRN*
Ga0181534_100773413	3300014168	Bog	ETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPKN*
Ga0181537_105822151	3300014201	Bog	MHAEPAALADTQKLHKLEIPKELASALGSHKPKMDYGIEALKPSFLSRMIEKLIGPKN*
Ga0157379_101941732	3300014968	Switchgrass Rhizosphere	MMHAEPALNDTQKLEIPMELRSALNSSAHKPKVDYGIEALKPSFLGRLMEKVFGPKN*
Ga0157379_115135722	3300014968	Switchgrass Rhizosphere	MMHAEPTLADTQKLEVPTELMKVLNSGAHKSKTDYGIEALKPSLLGRLIEKLIGPKN*
Ga0157376_103482283	3300014969	Miscanthus Rhizosphere	MMQTDGLAETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPKN*
Ga0157376_108989762	3300014969	Miscanthus Rhizosphere	MPTDGLADTQKLQIPQDLVSALGTHKPKTDYGIEALKPSFFGRLVEKLIGPKN*
Ga0137412_102493092	3300015242	Vadose Zone Soil	MMPAENTLADTQKLEIPTELMSVLNSGAHRPKTDYGIEALKPSFFGRLIEKLIGPKN*
Ga0137412_110494541	3300015242	Vadose Zone Soil	MMHAEPALADTQKLEIPTELISVLKSGAHKPKTDYGIEALKPSLFGRLIEKLIGPKN*
Ga0137403_104075522	3300015264	Vadose Zone Soil	LLAKNSFHFQVEDCLMHAEPALADTQKLEIPKDLMSALTSGAHKPRTDYGIEALKPSFFGRLMEKLLGSMN*
Ga0181512_13697943	3300019270	Peatland	MMPNDGLAETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPKN
Ga0179592_102841861	3300020199	Vadose Zone Soil	MMHAEPTLADTQKLEVPKELMSVLNSGAHKPKTDYGIEALKPSLLGRLIEKLLGPKN
Ga0210403_114552791	3300020580	Soil	MHAEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIEALKPSFFGRLIEKLLGPK
Ga0210406_102690841	3300021168	Soil	MMHAEPTLADTQKLEVPKELMSVLSSGAHKPRTDYGIEALKPSLLGRLIEKLLGPKN
Ga0210406_104968253	3300021168	Soil	MHAEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIESLKPSFFGRLIERLLGPKN
Ga0210406_111189041	3300021168	Soil	LLAKYSFHFQVEDCLMHAEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIESLKPSFFGRLIERLIGPKN
Ga0210400_114816901	3300021170	Soil	MMHADRTLADTQKLEIPTELISVLNSGAHKPKTDYGIEALKPSLLGRLIEKLIGPKN
Ga0213876_101424463	3300021384	Plant Roots	MPSDRALAETQKLELPKELLTALQNPDQRPRTDYGIESLKPSFFGRLMEKLLGPKD
Ga0213876_104674062	3300021384	Plant Roots	MMRAEPALADTQKLQVPTELMTALNSGAHKPKTDYGIEALKPSFFDRLVEKLLGPSKK
Ga0242662_102782581	3300022533	Soil	RWVRSLLAKYSFHFQVEDCLMHSEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIESLKPSFFGRLIERLIGPKN
Ga0212123_103575961	3300022557	Iron-Sulfur Acid Spring	MMHAEPALADTQKLEIPKDLMSALNSGAHRPKTDYGIEALKPSFLGRLMEKLLGPKN
Ga0242654_102276742	3300022726	Soil	MHAEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIEALKPSFFGRLIERLLGPKN
Ga0242654_104348812	3300022726	Soil	MMHAEPALADTQKLEIPHDLVNALGTHKPKTDYGIESLKPTFFGRLIEKLLGPKN
Ga0247778_10220803	3300022894	Plant Litter	MPSDGLADTQKLQIPQDLVSALGTHKPKTDYGIEAMKPSFFGRLVEKLIGPKN
Ga0209483_12018511	3300025862	Arctic Peat Soil	MHADPTLADTQKLEIPQELVSALNSRTHKPVTDFGIEALKPSLFGRLIEKLIGPKN
Ga0207710_100015947	3300025900	Switchgrass Rhizosphere	MMHAEPALADTQKLEIPMELRSALNSGAHKPKTDYGIEALKPSFFGRLIEKLLGPKS
Ga0207710_101553663	3300025900	Switchgrass Rhizosphere	MMHSEPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPRN
Ga0207680_111153232	3300025903	Switchgrass Rhizosphere	MMPTDGLAETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPKN
Ga0207695_110020891	3300025913	Corn Rhizosphere	PVRWVRSLLARSRPLLVEDCMMPAETGLAETQTLQIPQDLVNALGTHKPKTDYGIEALKPSFFGRLMEKLIGPKN
Ga0207695_112240431	3300025913	Corn Rhizosphere	EDCPMPESALADTQKLQIPTELVSALNSGTHKPKVDYGIEALKPSFFGRLMEKLLGPKK
Ga0207671_107415321	3300025914	Corn Rhizosphere	MPESALADTQKLQIPTELVSALNSGTHKPKVDYGIEALKPSFFGRLMEKLLGPKK
Ga0207644_104286373	3300025931	Switchgrass Rhizosphere	MMHSEPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLVEKLIGPRN
Ga0207661_106666091	3300025944	Corn Rhizosphere	MPAEHAALADTQKLQVPTELMSALSSSAHKPKIDYGIEALKPSFFSRFMEKLIGPKK
Ga0207667_103841363	3300025949	Corn Rhizosphere	MMHSEPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLM
Ga0207702_104656613	3300026078	Corn Rhizosphere	EPGLADTQKLKIPEGLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPRN
Ga0207641_123595952	3300026088	Switchgrass Rhizosphere	VLLSVEDFMMPTDGLAETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPKN
Ga0209881_11588461	3300026273	Soil	MMHAQSTLDDTQKLQLPQDLVAALNSRSHKPGTDYGIEALKPSLFGRFVEKLIGPKK
Ga0209331_11732561	3300027603	Forest Soil	MMHAEPALADTQKLEIPTELMSALNSGAHKPRTDYGIEALKPSLLGR
Ga0209815_11426232	3300027714	Marine	MMPAETGLAETQTFQIPQDLVSALGTHKPKTDYGIEALKPSFFGRLMEKLI
Ga0208989_100067075	3300027738	Forest Soil	MMHAEPALADTQKLEIPTELMSALNSGVHKPKTDYGIEALKPSLLGRLIEKLLGPKN
Ga0208989_102904601	3300027738	Forest Soil	VLVPLQVEDRMMHAEPALADSQKLEIPQDLMSALKSGAHKPKTDYGIEALKPSFFGRLIEKLIGPKN
Ga0209060_105167381	3300027826	Surface Soil	MPPESAALADTQKLQIPHDLMSALNSGGAKKTDYGIESLKPSFFGRLMEKLIGPKGR
Ga0209068_101898801	3300027894	Watersheds	MMHADSALADTQKLEIPKDLVSALGSHNHKTDYGIEAMKPSFFGRLIEKLIGPRN
Ga0209624_109135102	3300027895	Forest Soil	MHAEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIEALKPSFFGRLIEKLLGPKN
Ga0209488_100820452	3300027903	Vadose Zone Soil	MHAEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIESLKPSFFGRLMEKLLGPKN
Ga0209168_100272511	3300027986	Surface Soil	MHAESLEDTQKLVLPQDLVSALNSRAQKPKVDYGIEALKPSLFGRFVEKLIGPKR
Ga0209526_100167294	3300028047	Forest Soil	MMHAEPALADTQKLEIPTELMRALNSGAHKPKTDYGIEALKPSLLGRLIEKLIGPKN
Ga0209526_104492283	3300028047	Forest Soil	VEGYMMHAEPTLTDTQKLEIPQELMSVLNSSAHKPKTDYGIEALKPSLFGRLIEKLLGPK
Ga0268266_100563213	3300028379	Switchgrass Rhizosphere	MMMPAETGLAETQKLHIPQDLVSALGAHKPKTDYGIEALKPSFFGRLMEKLIGPKN
Ga0268266_103722921	3300028379	Switchgrass Rhizosphere	AEPALADTQKLEIPMELRSALNSGAHKPKTDYGIEALKPSFFGRLIEKLLGPKS
Ga0137415_10000005154	3300028536	Vadose Zone Soil	MMHAEPGLADTQKLEIPKDLMTALSSGAHKPRTDYGIEALKPSFFGRLVEKLIGPKN
Ga0137415_101485051	3300028536	Vadose Zone Soil	MMHAEPTLADTQKLEIPTELISVLNSGAHKPKTDYGIEALKPSLLGRLIEKLIGPKN
Ga0307517_102993721	3300028786	Ectomycorrhiza	DCMMPAETGLAETQTLHIPQDLVSALGTHKPKTDYGIEALKPSFFGRLMEKLIGPKN
Ga0222749_104283823	3300029636	Soil	PAQPTLADTQKLEIPTELMSVLNSGAHKPKTDYGIEALKPSLLGRLIEKLIGPKN
Ga0307511_100835423	3300030521	Ectomycorrhiza	MMHAEPALADTQKLEIPKDLMSALTSGAHKPRTDYGIEALKPSFFGRLMEKLLGSKN
Ga0075394_114068261	3300030969	Soil	DTQKLEIPKDLMSALTSGAHKHRADYGIEALKPSFFGRLVEKLIGPKN
Ga0075394_114961832	3300030969	Soil	VEDCMMHAEPTLADTQKLEVPKELMSVLNSGAHKPRTDYGIEALKPSLFGRLIEKLIGPK
Ga0075394_118687391	3300030969	Soil	DTQKLEIPKDLMSALSSGAHKPRTDYGIEALKPSFFGRLMEKLLGPKN
Ga0170824_1073799953	3300031231	Forest Soil	MMQTDGLAETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLMEKLIGPKN
Ga0170824_1146440371	3300031231	Forest Soil	MMPAETGLADTQKLEIPKDLMSALTSGAHKHRADYGIEALKPSFFGRLVEKLIGPKN
Ga0302323_1002913253	3300031232	Fen	MHNDAGLADTQKLQIPQDLVSALGTHKPKTDYGIEALKPSFFGRLMEKLIGGSKN
Ga0302325_111691352	3300031234	Palsa	MMHAEPSLADTQKLHIPPELMSALNSPTHKPKTDYGIEALKPSLFGRLVAKLLGSKN
Ga0170820_144389223	3300031446	Forest Soil	MHAEPALADTQKLEIPKDLMSALSSGAHKPRMDYGIESLKPSFFGRLVEKLLGPKN
Ga0170820_169389603	3300031446	Forest Soil	DTQKLEIPKDLMSALSSGAHKPRTDYGIESLKPSFFGRLVERLLGPKS
Ga0170819_120793743	3300031469	Forest Soil	EDCLMHAEPALADTQKLEIPKDLMSALSSGAHKPRMDYGIESLKPSFFGRLVEKLLGPKN
Ga0170818_1100133093	3300031474	Forest Soil	MHAEPALADTQKLEIPKDLMSALSSGAHKPRTDYGIEALKPSFFGRLMEKLLGPKN
Ga0170818_1133252251	3300031474	Forest Soil	MMHAEPTLADTQKLEVPKELMSVLNSGAHKPRTDYGIEALKPSLFGRLIEKLIGPKN
Ga0307509_10000005384	3300031507	Ectomycorrhiza	MHAEPALADTQKLEIPHDLVSALGTHKPKTDYGIEALKPSFFGRLIEKLLGPKD
Ga0307508_100606281	3300031616	Ectomycorrhiza	MMHSEPTLADTQKLEVPTELMRVLNSGAHKSKTDYGIEALKPSLLGRLIEKLIGPKN
Ga0307476_100296054	3300031715	Hardwood Forest Soil	MHAEPALADTQKLQIPHELASALSSGAHKPKMDYGIESLKPSFFGRLIERLIGPKK
Ga0307477_102315051	3300031753	Hardwood Forest Soil	MMRAEPALADTQKLQVPTELMSALNSGAHKPRTDYGIEALKPSFFDRLVEKLLGPRK
Ga0307475_102546963	3300031754	Hardwood Forest Soil	MMRAEPALADTQKLQVPTELMSALTSGAHKPRTDYGIEALKPSFFDRLVEKLLGPRK
Ga0307479_100531994	3300031962	Hardwood Forest Soil	MHAEPTLADTQKLEVPKELMSVLNSGAHKPRTDYGIEALKPSLFGRLIEKLLGPKN
Ga0307479_120596501	3300031962	Hardwood Forest Soil	MMHADPALNDTQKLQVPTELMSALNSGAHKPKLDYGIEALKPSFFGRLMEKLIGPKK
Ga0335079_104674071	3300032783	Soil	MMHADPALADTQKLQIPHDLMSALNSGAHKPKTDYGIEALKPSFFSRLVQKLIGPKN
Ga0335076_101017383	3300032955	Soil	MMHADPALADTQKLQIPHDLMSALNSGAHKPKTDYGIEALKPSFFSR
Ga0307510_10000006388	3300033180	Ectomycorrhiza	MMQTDGLAETQKLQIPQDLVSALGQHKPKTDYGIEALKPSFFGRLLEKLIGPKN
Ga0307510_100014917	3300033180	Ectomycorrhiza	MMPAETGLAETQTLHIPQDLVSALGTHKPKTDYGIEALKPSFFGRLMEKLIGPKN
Ga0316624_119704682	3300033486	Soil	TSVEDCTMPAEPTPADTQKLEIPHELVSALGAHKPKTDYGIEALKPSFFGRLIEKLIGPR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051460

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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