Metagenome / Metatranscriptome Family F051421

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051421
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	75 residues
Representative Sequence	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD
Number of Associated Samples	127
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.11 %
% of genes near scaffold ends (potentially truncated)	42.36 %
% of genes from short scaffolds (< 2000 bps)	79.86 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.472 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.611 % of family members)
Environment Ontology (ENVO)	Unclassified (28.472 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 44.55% Coil/Unstructured: 55.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.53.1.1: Ribosomal protein L25-like	d1dfup_	1dfu	0.64237
b.53.1.1: Ribosomal protein L25-like	d1feua_	1feu	0.62307
b.53.1.1: Ribosomal protein L25-like	d2zjrs1	2zjr	0.6208
b.168.1.1: HisI-like	d1zpsa1	1zps	0.60938
b.53.1.0: automated matches	d5bnza2	5bnz	0.59912

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF01434	Peptidase_M41	6.94
PF04392	ABC_sub_bind	2.08
PF01329	Pterin_4a	2.08
PF09335	SNARE_assoc	1.39
PF13358	DDE_3	1.39
PF13340	DUF4096	1.39
PF00346	Complex1_49kDa	1.39
PF11953	DUF3470	1.39
PF02653	BPD_transp_2	1.39
PF00480	ROK	0.69
PF04546	Sigma70_ner	0.69
PF02896	PEP-utilizers_C	0.69
PF12850	Metallophos_2	0.69
PF04355	SmpA_OmlA	0.69
PF08241	Methyltransf_11	0.69
PF13676	TIR_2	0.69
PF00083	Sugar_tr	0.69
PF04545	Sigma70_r4	0.69
PF01527	HTH_Tnp_1	0.69
PF02668	TauD	0.69
PF14235	DUF4337	0.69
PF04972	BON	0.69
PF11149	DUF2924	0.69
PF04107	GCS2	0.69
PF09084	NMT1	0.69
PF13586	DDE_Tnp_1_2	0.69
PF00174	Oxidored_molyb	0.69
PF00383	dCMP_cyt_deam_1	0.69
PF01042	Ribonuc_L-PSP	0.69
PF03401	TctC	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	6.94
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	2.08
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.08
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.39
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.39
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	1.39
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.39
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.39
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	1.39
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.69
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.69
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.69
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.69
COG2913	Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex	Cell wall/membrane/envelope biogenesis [M]	0.69
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.69
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.69
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.17 %
Unclassified	root	N/A	45.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.17 %
Unclassified	root	N/A	45.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.47 %
Unclassified	root	N/A	45.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.44 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.36 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	24.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.33 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	0.69 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.47 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.39 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.08 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.39 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	0.69 %
Terricaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Terricaulis	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.61 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.39 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	0.69 %
Terricaulis silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Terricaulis → Terricaulis silvestris	0.69 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.61 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.39 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	0.69 %
Terricaulis silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Terricaulis → Terricaulis silvestris	0.69 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10009011	All Organisms → cellular organisms → Bacteria	2746	Open in IMG/M
3300000955\|JGI1027J12803_105961735	Not Available	616	Open in IMG/M
3300002245\|JGIcombinedJ26739_101389722	Not Available	595	Open in IMG/M
3300002906\|JGI25614J43888_10005306	All Organisms → cellular organisms → Bacteria	4130	Open in IMG/M
3300002906\|JGI25614J43888_10019508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2170	Open in IMG/M
3300002907\|JGI25613J43889_10015217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2147	Open in IMG/M
3300002914\|JGI25617J43924_10060329	Not Available	1384	Open in IMG/M
3300002917\|JGI25616J43925_10028047	All Organisms → cellular organisms → Bacteria → Proteobacteria	2494	Open in IMG/M
3300002917\|JGI25616J43925_10135123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	995	Open in IMG/M
3300002917\|JGI25616J43925_10238940	Not Available	685	Open in IMG/M
3300004633\|Ga0066395_10176770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1101	Open in IMG/M
3300005163\|Ga0066823_10002185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2340	Open in IMG/M
3300005174\|Ga0066680_10892102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300005332\|Ga0066388_100944077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1434	Open in IMG/M
3300005332\|Ga0066388_101160805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1315	Open in IMG/M
3300005434\|Ga0070709_11579365	Not Available	534	Open in IMG/M
3300005436\|Ga0070713_100912743	Not Available	845	Open in IMG/M
3300005445\|Ga0070708_100272032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1593	Open in IMG/M
3300005447\|Ga0066689_10343980	Not Available	930	Open in IMG/M
3300005467\|Ga0070706_101684473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300005468\|Ga0070707_102215967	Not Available	517	Open in IMG/M
3300005554\|Ga0066661_10221928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300005713\|Ga0066905_102033826	Not Available	533	Open in IMG/M
3300005764\|Ga0066903_101002143	Not Available	1527	Open in IMG/M
3300005764\|Ga0066903_102472932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1005	Open in IMG/M
3300005764\|Ga0066903_105722927	Not Available	653	Open in IMG/M
3300006028\|Ga0070717_10134993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2124	Open in IMG/M
3300006172\|Ga0075018_10670921	Not Available	558	Open in IMG/M
3300006575\|Ga0074053_11403641	Not Available	589	Open in IMG/M
3300006578\|Ga0074059_10022345	Not Available	622	Open in IMG/M
3300006604\|Ga0074060_10019695	Not Available	509	Open in IMG/M
3300006606\|Ga0074062_13020804	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300006755\|Ga0079222_12301670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300006797\|Ga0066659_10133090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Terricaulis → Terricaulis silvestris	1743	Open in IMG/M
3300006852\|Ga0075433_11860779	Not Available	517	Open in IMG/M
3300007255\|Ga0099791_10041506	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300009012\|Ga0066710_102273424	Not Available	789	Open in IMG/M
3300009088\|Ga0099830_10458201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1036	Open in IMG/M
3300009090\|Ga0099827_10086581	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	2460	Open in IMG/M
3300009101\|Ga0105247_11729573	Not Available	518	Open in IMG/M
3300009137\|Ga0066709_101707834	Not Available	892	Open in IMG/M
3300009143\|Ga0099792_10800061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300010043\|Ga0126380_12024190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300010046\|Ga0126384_10222049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1510	Open in IMG/M
3300010047\|Ga0126382_10102799	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300010047\|Ga0126382_10888440	Not Available	770	Open in IMG/M
3300010048\|Ga0126373_10219906	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300010362\|Ga0126377_10252699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1717	Open in IMG/M
3300011269\|Ga0137392_10176499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1738	Open in IMG/M
3300011269\|Ga0137392_10507594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300012096\|Ga0137389_11096701	Not Available	682	Open in IMG/M
3300012189\|Ga0137388_11410745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300012199\|Ga0137383_10659576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	765	Open in IMG/M
3300012201\|Ga0137365_10396577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	1018	Open in IMG/M
3300012202\|Ga0137363_10258748	Not Available	1417	Open in IMG/M
3300012204\|Ga0137374_11021680	Not Available	596	Open in IMG/M
3300012208\|Ga0137376_11423415	Not Available	584	Open in IMG/M
3300012209\|Ga0137379_11704840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300012349\|Ga0137387_10211460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1394	Open in IMG/M
3300012350\|Ga0137372_10204142	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300012356\|Ga0137371_10609895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838	Open in IMG/M
3300012357\|Ga0137384_10405435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1126	Open in IMG/M
3300012359\|Ga0137385_10950212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300012361\|Ga0137360_10098227	Not Available	2234	Open in IMG/M
3300012362\|Ga0137361_10653951	Not Available	962	Open in IMG/M
3300012362\|Ga0137361_11411576	Not Available	619	Open in IMG/M
3300012363\|Ga0137390_10743264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	941	Open in IMG/M
3300012363\|Ga0137390_10989271	Not Available	793	Open in IMG/M
3300012917\|Ga0137395_10322194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1098	Open in IMG/M
3300012929\|Ga0137404_11733281	Not Available	580	Open in IMG/M
3300012941\|Ga0162652_100026108	Not Available	849	Open in IMG/M
3300012971\|Ga0126369_13485691	Not Available	515	Open in IMG/M
3300012986\|Ga0164304_10840774	Not Available	712	Open in IMG/M
3300015372\|Ga0132256_103413571	Not Available	534	Open in IMG/M
3300016357\|Ga0182032_10164603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1655	Open in IMG/M
3300016387\|Ga0182040_10598622	Not Available	892	Open in IMG/M
3300016422\|Ga0182039_10382743	Not Available	1190	Open in IMG/M
3300016445\|Ga0182038_10125437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1916	Open in IMG/M
3300016445\|Ga0182038_10603596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	948	Open in IMG/M
3300018433\|Ga0066667_10500152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1001	Open in IMG/M
3300020140\|Ga0179590_1079627	Not Available	871	Open in IMG/M
3300021088\|Ga0210404_10059395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1827	Open in IMG/M
3300021168\|Ga0210406_11307950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300021432\|Ga0210384_10093231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2704	Open in IMG/M
3300024347\|Ga0179591_1116656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2314	Open in IMG/M
3300025885\|Ga0207653_10135036	Not Available	898	Open in IMG/M
3300025922\|Ga0207646_11256212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300026285\|Ga0209438_1088662	Not Available	972	Open in IMG/M
3300026304\|Ga0209240_1008691	All Organisms → cellular organisms → Bacteria → Proteobacteria	3840	Open in IMG/M
3300026304\|Ga0209240_1013547	All Organisms → cellular organisms → Bacteria	3105	Open in IMG/M
3300026304\|Ga0209240_1057774	Not Available	1454	Open in IMG/M
3300026309\|Ga0209055_1245583	Not Available	552	Open in IMG/M
3300026319\|Ga0209647_1266583	Not Available	573	Open in IMG/M
3300026361\|Ga0257176_1065898	Not Available	582	Open in IMG/M
3300026446\|Ga0257178_1054821	Not Available	525	Open in IMG/M
3300026482\|Ga0257172_1105306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300026494\|Ga0257159_1033013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300026551\|Ga0209648_10002280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15863	Open in IMG/M
3300026551\|Ga0209648_10122717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2092	Open in IMG/M
3300026551\|Ga0209648_10150352	Not Available	1840	Open in IMG/M
3300026995\|Ga0208761_1026350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300027071\|Ga0209214_1008637	Not Available	1198	Open in IMG/M
3300027288\|Ga0208525_1003798	Not Available	1552	Open in IMG/M
3300027605\|Ga0209329_1053921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	860	Open in IMG/M
3300027671\|Ga0209588_1029793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1742	Open in IMG/M
3300027846\|Ga0209180_10269976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	977	Open in IMG/M
3300027875\|Ga0209283_10181715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1397	Open in IMG/M
3300027882\|Ga0209590_10199054	Not Available	1265	Open in IMG/M
3300027903\|Ga0209488_11040285	Not Available	564	Open in IMG/M
3300028536\|Ga0137415_10061034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3636	Open in IMG/M
3300028878\|Ga0307278_10161240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1003	Open in IMG/M
3300031469\|Ga0170819_15183952	Not Available	508	Open in IMG/M
3300031549\|Ga0318571_10143246	Not Available	820	Open in IMG/M
3300031573\|Ga0310915_10047133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2768	Open in IMG/M
3300031713\|Ga0318496_10356918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300031724\|Ga0318500_10415376	Not Available	670	Open in IMG/M
3300031736\|Ga0318501_10020251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2784	Open in IMG/M
3300031744\|Ga0306918_10057262	All Organisms → cellular organisms → Bacteria	2618	Open in IMG/M
3300031763\|Ga0318537_10010622	All Organisms → cellular organisms → Bacteria	3090	Open in IMG/M
3300031764\|Ga0318535_10235307	Not Available	820	Open in IMG/M
3300031764\|Ga0318535_10275225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300031769\|Ga0318526_10062207	Not Available	1444	Open in IMG/M
3300031795\|Ga0318557_10007715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3811	Open in IMG/M
3300031798\|Ga0318523_10090834	Not Available	1489	Open in IMG/M
3300031832\|Ga0318499_10143663	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300031833\|Ga0310917_10251048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1190	Open in IMG/M
3300031879\|Ga0306919_10428905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300031890\|Ga0306925_10134975	Not Available	2649	Open in IMG/M
3300031894\|Ga0318522_10008079	All Organisms → cellular organisms → Bacteria	3076	Open in IMG/M
3300031910\|Ga0306923_10050933	Not Available	4569	Open in IMG/M
3300031912\|Ga0306921_10059521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4356	Open in IMG/M
3300031946\|Ga0310910_10987963	Not Available	658	Open in IMG/M
3300032010\|Ga0318569_10058775	Not Available	1679	Open in IMG/M
3300032025\|Ga0318507_10182358	Not Available	903	Open in IMG/M
3300032035\|Ga0310911_10384096	Not Available	812	Open in IMG/M
3300032051\|Ga0318532_10004347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4060	Open in IMG/M
3300032052\|Ga0318506_10419897	Not Available	593	Open in IMG/M
3300032059\|Ga0318533_10170910	Not Available	1546	Open in IMG/M
3300032060\|Ga0318505_10013550	All Organisms → cellular organisms → Bacteria	3016	Open in IMG/M
3300032064\|Ga0318510_10015891	Not Available	2309	Open in IMG/M
3300032076\|Ga0306924_11393223	Not Available	748	Open in IMG/M
3300032076\|Ga0306924_11704523	Not Available	660	Open in IMG/M
3300032094\|Ga0318540_10410247	Not Available	654	Open in IMG/M
3300032261\|Ga0306920_104071456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.92%
Host-Associated	Host-Associated	2.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.22%
Plants	Host-Associated → Plants	2.08%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.08%
Sediment	Environmental → Aquatic → Sediment	0.69%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.03%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100090115	3300000597	Forest Soil	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD*
JGI1027J12803_1059617352	3300000955	Soil	MKPTAAMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD*
JGIcombinedJ26739_1013897221	3300002245	Forest Soil	MKATWHVKLTRGDHARTAFTDDLDRVPKRGAITTLQVDGERVKLKIDVVREQPSYARAAASLGVFDVLATEVD*
JGI25614J43888_100053062	3300002906	Grasslands Soil	MKATWHVKLTRREHSRTAFTDYVDRVPKRGAITTLHVDGEQVKLRIDVVREQTSYTRAAASLGVFDVLATEID*
JGI25614J43888_100195083	3300002906	Grasslands Soil	MAMKATWHVKLTRREHSRTAFTDYVDRVPKRGAITTLHVDGEQVKLRIDVVREQTSYTRAAASLGVFDVLATEID*
JGI25613J43889_100152174	3300002907	Grasslands Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHKQTHARAASLGVFDVLATEVD*
JGI25617J43924_100603294	3300002914	Grasslands Soil	EHKCVPPTGAKAMAVKATWHVKLTRGDHARTAFTDYVNRVPKCGAIETLHVDGERVKLRINVVHEQPRARWASLGVFDVLATEID*
JGI25616J43925_100280474	3300002917	Grasslands Soil	MVVEATWHVKLTRRDHLRTAFTDYLNHVPKRGTIIILHIDGERVKLRIDIVHEQPRGARAASFGVFDVFATEVD*
JGI25616J43925_101351232	3300002917	Grasslands Soil	MAVEATWHVKLTRREHSRTVFTDYLSRVPKRGAIITLHIDGEQVKLRIDVVHEQPRGQRAGSLGVFDVLATEVD*
JGI25616J43925_102389402	3300002917	Grasslands Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQTHARAASLGVFDVLATEVD*
Ga0066395_101767701	3300004633	Tropical Forest Soil	MAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD*
Ga0066823_100021852	3300005163	Soil	MAVKATWHVKLTRRDHSRTAFTEYLNRVPKRGAIATLDVDGERVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0066680_108921021	3300005174	Soil	CGEDARMKIKREQPPFRKARRVVVVEATWHVKLTRRDHSRTVFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD*
Ga0066388_1009440773	3300005332	Tropical Forest Soil	MKPTAAMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD*
Ga0066388_1011608051	3300005332	Tropical Forest Soil	MTAKNATWHVKLTRRDRSRTAFTDDVDRVPKRGAIATLHVDGEPVKLRIDDVHEQASYSRDAASLGVFGVLATEVG*
Ga0070709_115793652	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAQKAMTAKATWHVKLTRRDHSRTAFTDYLNRAPKRGAITTLHVDGEQVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0070713_1009127432	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VMAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD*
Ga0070708_1002720324	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLKIDVVHEQPRGQRAASLGVFDVLATEVD*
Ga0066689_103439802	3300005447	Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQPRGQRAGSPGVFDVLATEVD*
Ga0070706_1016844732	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAQKAVTAKATWHVKLTRRDHSRTAFTDYLNRAPKRGAITTLHVDGEQVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0070707_1022159671	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAMKATWHVKLTRREHSRTAFTDYLDRVPKRGAITTLHVDGEQVKLRIDVVREQTSYTRAAASLGVFDVLATEID*
Ga0066661_102219283	3300005554	Soil	MAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGATITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD*
Ga0066905_1020338262	3300005713	Tropical Forest Soil	MAVEATWHVKLTRQDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD*
Ga0066903_1010021431	3300005764	Tropical Forest Soil	MAVEATWHVKLRRRDRSRIVFTDYLNRVPKRRAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLAT
Ga0066903_1024729321	3300005764	Tropical Forest Soil	SSRLRKVRRVMAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHELPRGQRAASLGVFDVLATEVD*
Ga0066903_1057229272	3300005764	Tropical Forest Soil	MTAKKATWHVKLTRRDRSRTAFTDDVDRVPKRGAIATLHVDGEPVKLRIDAVHEQASYSRDAASLGVFGVLATELG*
Ga0070717_101349931	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAVKATWHVKLTRREHSRTAFTEYLNRVPKRGAIATLDVDGERVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0075018_106709212	3300006172	Watersheds	HEGAHAFRPSHRPRGASHKAQRAMAMKATWHVKLTRREHSRTAFTDYVDRVPKRGAITTLHVDGEQVKLRIDVVREQTSYTRAAASLGVFDVLATEID*
Ga0074053_114036412	3300006575	Soil	MAIKATWHVKLTRGDHARTAFTDHLNRVPKRGAIATLDVDGERVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0074059_100223452	3300006578	Soil	MTAKATWHVKLTRRDHSRTAFTDYLNRAPKRGAITTLHVDGEQVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0074060_100196951	3300006604	Soil	RDHSRTAFTDYLNRAPKRGAITTLHVDGEQVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0074062_130208042	3300006606	Soil	MTAKATWYVKLTRRDHSRTAFTDYLNRAPKRGAITTLHVDGEQVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0079222_123016702	3300006755	Agricultural Soil	VMAMKATWHVKLTRGDHTRTAFTDYVNRVPKRRAIETLHVDGERVKFRIDVVHEQPRARWASLGVFDVLATEVD*
Ga0066659_101330902	3300006797	Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHAQTHARAASLGVFDVLATEVD*
Ga0075433_118607793	3300006852	Populus Rhizosphere	RVMAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD*
Ga0099791_100415063	3300007255	Vadose Zone Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPRRGAIQTVHVNGERVKLRIDVVHEQTNTRAASLGVFDVLATEVD*
Ga0066710_1022734241	3300009012	Grasslands Soil	MAVEATWHVKLTRRDHSRTAFTEYLNRVPKRGAIATLDVDGERVKLRIDVVHEQTPPRAASLGVFDVLATEVD
Ga0099830_104582013	3300009088	Vadose Zone Soil	MTVKATWHVKLTRRDHSRTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQTHARAASLGVFDVLATEVD*
Ga0099827_100865815	3300009090	Vadose Zone Soil	KATWHVKLTRGDHTRTAFTDYVNRVPKRRAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD*
Ga0105247_117295731	3300009101	Switchgrass Rhizosphere	PGGKTMAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKFRIDVVHEQTHARAASLGVFDVLATEVD*
Ga0066709_1017078342	3300009137	Grasslands Soil	MAIKATWHVKLTRGDHARTAFTDYPNRVPKRGAIETVHVDGERVKLRIDVVHEQTHARAASLGVFDVLATEVD*
Ga0099792_108000611	3300009143	Vadose Zone Soil	KVRRVMAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD*
Ga0126380_120241901	3300010043	Tropical Forest Soil	RGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD*
Ga0126384_102220493	3300010046	Tropical Forest Soil	MAVEATWHVKLTRQDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGAFDVLATEVD*
Ga0126382_101027991	3300010047	Tropical Forest Soil	MKPTAAMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRGQRAAG
Ga0126382_108884401	3300010047	Tropical Forest Soil	IKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVYEQTHARAASLGVFDVLATEVD*
Ga0126373_102199061	3300010048	Tropical Forest Soil	MKPTAAMAVKATWHVKLTRGDHARTAFTDYHNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDV
Ga0126377_102526992	3300010362	Tropical Forest Soil	MKPTAAMAVKATWHVKLTRGDHARTAFTDYHNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD*
Ga0137392_101764994	3300011269	Vadose Zone Soil	MVVEATWHVKLTRRDHLRTAFTDYLNHVPKRGTIIILHIDGERVKLRIDVVHEQPRGARAASLGVFDVFATEVD*
Ga0137392_105075941	3300011269	Vadose Zone Soil	MTVKATWHVKLTRRDHSRTAFTDYLNRVQKRGAIETVHVDGERVKLRIDVVHEQTHARAASLGVFDVLATEVD*
Ga0137389_110967013	3300012096	Vadose Zone Soil	TRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEHTHARAASLGVFDVLATEVD*
Ga0137388_114107452	3300012189	Vadose Zone Soil	MTAKATWHVKLTRRDHSRTAFTDYLNRAPKHGAITTLHVDGEQVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0137383_106595762	3300012199	Vadose Zone Soil	VKLTRRDHSRTAFTDYLDRAPKRGAITTLHVDGEQVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0137365_103965771	3300012201	Vadose Zone Soil	MAVKATWHVKLTRRDHSRTAFTEYLNRVPKRGAIATLDVDGERVKLRIDVVHEQTPPRAASLGVFDVLATEID*
Ga0137363_102587481	3300012202	Vadose Zone Soil	KVRRVMAVEATWHVKLTRRDHLRTAFTDYLNHIPKRGTIIILHIGGERVKLRIDVVHEEPRGQRAGSLGVFGVFATEVD*
Ga0137374_110216803	3300012204	Vadose Zone Soil	MAVKATWHVKLTRRDHSRTAFTDYLDRVPKRGAITTLHVDGERVKLRIDVVHEQPRGARAPSLGVFDVLATEVD
Ga0137376_114234152	3300012208	Vadose Zone Soil	MAVKATWHIKLTRRDHSRTAFTEYLNRVPKRGAIATLDVDGERVKLRIDVVHEQTPPRAASLGVFDVLATEIASSFAGRSNPRQA*
Ga0137379_117048401	3300012209	Vadose Zone Soil	ATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLSVFDVLATEVD*
Ga0137387_102114604	3300012349	Vadose Zone Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD*
Ga0137372_102041424	3300012350	Vadose Zone Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQTHARAASLDVFDVLATEVD*
Ga0137371_106098952	3300012356	Vadose Zone Soil	KATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD*
Ga0137384_104054352	3300012357	Vadose Zone Soil	MAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLKIDVVHEEPRGQRAGSLGAFDVFATEVN*
Ga0137385_109502122	3300012359	Vadose Zone Soil	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD*
Ga0137360_100982274	3300012361	Vadose Zone Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHKQTHARGASLGVFDVLATEVD*
Ga0137361_106539512	3300012362	Vadose Zone Soil	MKIKREQPPFRKARRVVVVEATWHVKLTRRDHLRTAFTDYLNHVPKRGTIIILHIDGERVKLRIDVVHEQPRGARAASLGVFDVFATEVD*
Ga0137361_114115762	3300012362	Vadose Zone Soil	MAVEATWHVKLTRRDHLRTAFTDYLNHIPKRGTIIILHIGGERVKLRIDVVHEEPRGQRAGSLGVFGVFATEVD*
Ga0137390_107432643	3300012363	Vadose Zone Soil	MTVKATWHVKLTRRDHSRTAFTDYLNRVPKQGAITALPVDGERVKFKIDVVREHTTYGRAASLGVFDVLATEVD*
Ga0137390_109892711	3300012363	Vadose Zone Soil	TWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHKQTHARGASLGVFDVLATEVD*
Ga0137395_103221941	3300012917	Vadose Zone Soil	MAIKATWHVKLTRGDHARTAFTDYLDRVPKRGAIETVHVDGERVKLRIDVVHEQTRARAASLGVFDVLATEVD*
Ga0137404_117332811	3300012929	Vadose Zone Soil	KLTRREHSRTAFTDYVDRVPKRGAITTLHVDGEQVKLRIDVVREQTSYTRAAASLGVFDVLATEID*
Ga0162652_1000261081	3300012941	Soil	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGATETVHVDGERVKLRIDVVHEQTHARAASLGVFDVLATEID*
Ga0126369_134856911	3300012971	Tropical Forest Soil	MTAKATWHVKLTRRDHSRIAFTDYLNRAPKRGAITTLHVDGEQVKLRIDVVREQPPHTRAAASLGVFDVLATEID*
Ga0164304_108407742	3300012986	Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKCGAIETVHVDGERVKLRIDVVHEQTRARAASLGVFDVLATEVD*
Ga0132256_1034135712	3300015372	Arabidopsis Rhizosphere	RQAQAMTIKATRHVKLTRRDHSRTAFMDYVNRVPKRGAITTLHVDSERVKLRIDVVHEQPRGARAASLGVFDVLATEVD*
Ga0182032_101646031	3300016357	Soil	MTVKATWHVKLTRRDRSRTAFADYLNRVPKRGAIETLHVDGERVRLRIDVVREQTHTRAAASLGIFD
Ga0182040_105986223	3300016387	Soil	KLTRRDHSRIAFTDYLNRVPKRRAIITLHIDGKRVKLRIDVVHEQPRVRAAGLGVFDVLATEVD
Ga0182039_103827433	3300016422	Soil	MAVEATWHVKLTRRDHSRIAFTDYLNRVPKRRAIITLHIDGKRVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0182038_101254371	3300016445	Soil	AVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDSERVKLKIDVVHEQPHARAASLGVFDVLATEVD
Ga0182038_106035961	3300016445	Soil	VMAVEATWHVKLTRRDHSRIAFTDYLNRVPKRRAIITLHIDGKRVKLRIDVVHEQPRVRAAGLGVFDVLATEVD
Ga0066667_105001523	3300018433	Grasslands Soil	VEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0179590_10796272	3300020140	Vadose Zone Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVREQPPHTRAAASLGVFDVLATEID
Ga0210404_100593952	3300021088	Soil	MAVKATWHVKLTRRDHSRTAFTEYLNRVPKRGAIATLDVDGERVKLRIDVVRKQPPHTRAAASLGVFDVLATEID
Ga0210406_113079502	3300021168	Soil	MAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0210384_100932316	3300021432	Soil	MKPTAAMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD
Ga0179591_11166564	3300024347	Vadose Zone Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQTRARAASLGVFDVLATEVD
Ga0207653_101350362	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD
Ga0207646_112562122	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD
Ga0209438_10886622	3300026285	Grasslands Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQTHARAASLGVFDVLATEVD
Ga0209240_10086916	3300026304	Grasslands Soil	MAMKATWHVKLTRREHSRTAFTDYVDRVPKRGAITTLHVDGEQVKLRIDVVREQTSYTRAAASLGVFDVLATEID
Ga0209240_10135474	3300026304	Grasslands Soil	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQTHTRAASLGVFDVLATEVD
Ga0209240_10577743	3300026304	Grasslands Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHKQTHARAASLGVFDVLATEVD
Ga0209055_12455832	3300026309	Soil	MAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGATITLHIDGERVKLRIDVVREQPPHTRAAASLGVFDVLATEID
Ga0209647_12665832	3300026319	Grasslands Soil	VKATWHVKLTRRDYSRTAFTEYLNRVPKRGAIATLDVDGERVKLRIDVVREQPPHTRAAASLGVFDVLAT
Ga0257176_10658982	3300026361	Soil	VKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHKQTHARAASLGVFDVLATEVD
Ga0257178_10548212	3300026446	Soil	GKTMAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHKQTHARAASLGVFDVLATEVD
Ga0257172_11053062	3300026482	Soil	MAVEATWHVKLTRREHSRTVFTDYLSRVPKRGAIITLHIDGEQVKLRIDVVHEQPRGQRAGSLGVFDVLATEVD
Ga0257159_10330133	3300026494	Soil	HRSGVFTVTKAMTVKATWHVKLTRRDHSRTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQTHARAASLGVFDVLATEVD
Ga0209648_100022803	3300026551	Grasslands Soil	MVVEATWHVKLTRRDHLRTAFTDYLNHVPKRGTIIILHIDGERVKLRIDIVHEQPRGARAASFGVFDVFATEVD
Ga0209648_101227174	3300026551	Grasslands Soil	MAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEEPRGQRAGSLGAFDVFATEVN
Ga0209648_101503521	3300026551	Grasslands Soil	QPPFRKARRVVVVEATWHVKLTRRDHSRTVFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAGSLGVFDVLATEVD
Ga0208761_10263502	3300026995	Soil	MAQKSMTAKATWYVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAGSLGVFDVLATEVD
Ga0209214_10086373	3300027071	Forest Soil	MAVKATWHVKLTRRDHSRTAFTEYLNRVPKRGAIATLDVDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0208525_10037982	3300027288	Soil	MAEEATWHVKLTRRDHSRTAFTEYLNRVPKRGAIATLDVDGERVKLRIDVVREQPPHTRAAASLGVFDVLATEID
Ga0209329_10539212	3300027605	Forest Soil	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGATETVHVDGERVKLRIDVVHEQPRGQRAGSLGVFDVLATEVD
Ga0209588_10297932	3300027671	Vadose Zone Soil	MKATWHVKLTRREHSRTAFTDYVDRVPKRGAITTLHVDGEQVKLRIDVVREQTSYTRAAASLGVFDVLATEID
Ga0209180_102699762	3300027846	Vadose Zone Soil	MAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQPRGARAASLGVFDVFATEVD
Ga0209283_101817154	3300027875	Vadose Zone Soil	MAVEATWYVKLTRGDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAGSLGVFD
Ga0209590_101990543	3300027882	Vadose Zone Soil	RASPTGAKAIAVKATWHVKLTRGDHTRTAFTDYVNRVPKRRAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD
Ga0209488_110402852	3300027903	Vadose Zone Soil	HVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQTHARAASLGVFDVLATEVD
Ga0137415_100610344	3300028536	Vadose Zone Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHKQTRARAASLGVFDVLATEVD
Ga0307278_101612403	3300028878	Soil	WLKATWHVKLTRGDHARTAFTDHLNRIPKRGAIETVHVDGERVKLRIDVVHEQTHTRAASLGVFDVLATEVG
Ga0170819_151839521	3300031469	Forest Soil	MAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHKQTHARAASLGVFDVLATE
Ga0318571_101432463	3300031549	Soil	GFMKPTAAMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD
Ga0310915_100471331	3300031573	Soil	GAKAMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD
Ga0318496_103569182	3300031713	Soil	PPSSRLRKVRRVMAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0318500_104153762	3300031724	Soil	MTVKATWHVKLTRRDRSRTAFADYLNRVPKRGAIETLHVDGERVRLRIDVVREQTHTRAAASLGIFDVLATEID
Ga0318501_100202513	3300031736	Soil	MARAAALGRVRRVMAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0306918_100572621	3300031744	Soil	MAVEATWHVKLTRRDHSRIAFTDYLNRVPKRRAIITLHIDGKRVKLRIDVVHEQPRVRAAGLGVFDVLATEVD
Ga0318537_100106221	3300031763	Soil	SWSRPASRSRVESSKRNGQSSRLRKVRRVMAVEATWHVKLTRQDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0318535_102353073	3300031764	Soil	AMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD
Ga0318535_102752252	3300031764	Soil	SSRLRKVRRVMAVEATWHVKLTRQDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0318526_100622073	3300031769	Soil	LYASAPGGKTMAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD
Ga0318557_100077151	3300031795	Soil	EATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0318523_100908341	3300031798	Soil	VKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD
Ga0318499_101436631	3300031832	Soil	MAVEATWHVKLTRQDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHELPRGQRAASLGVFDVLATEVD
Ga0310917_102510481	3300031833	Soil	GRSENSAWEGAKAMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGVFDVLATEVD
Ga0306919_104289053	3300031879	Soil	RAAALREGAKVMAVEATWHVKLTRRDHSRIAFTDYLNRVPKRRAIITLHIDGKRVKLRIDVVHEQPRVRAAGLGVFDVLATEVD
Ga0306925_101349754	3300031890	Soil	MIAKATWHVKLTRGDHARTIFTKHLDRIPKRGAITTLHVDGQRVKLRIDVVHEQTHTRAAASLGIFDVLATEID
Ga0318522_100080791	3300031894	Soil	SWSRPASRSRVESSKRNGQSSRLRKVRRVMAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0306923_100509331	3300031910	Soil	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGATETVHVDGEQVKLRIDVVHEQTRARAASLGVFDVLATEID
Ga0306921_100595216	3300031912	Soil	VRRVMAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0310910_109879631	3300031946	Soil	VEATWHVKLTRRDHSRIAFTDYLNRVPKRRAIITLHIDGKRVKLRIDVVHEQPRVRAAGLGVFDVLATEVD
Ga0318569_100587751	3300032010	Soil	GRSENSAWEGAKAMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD
Ga0318507_101823581	3300032025	Soil	KATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD
Ga0310911_103840961	3300032035	Soil	EGAKVMAVEATWHVKLTRRDHSRIAFTDYLNRVPKRRAIITLHIDGKRVKLRIDVVHEQPRVRAAGLGVFDVLATEVD
Ga0318532_100043478	3300032051	Soil	RRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0318506_104198971	3300032052	Soil	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGATETVHVDGEQVKLRIDVVHEQTRARAASLLI
Ga0318533_101709101	3300032059	Soil	VRSAWEGAKAMAVKATWHVKLTRGDHARTAFTDYLNRVPKRGATETVHVDGEQVKLRIDVVHEQTRARAASLGVFDVLATEID
Ga0318505_100135506	3300032060	Soil	WSRPASRSRVESSKRNGQSSRLRKVRRVMAVEATWHVKLTRRDHSRTAFTDYLNRVPKRGAIITLHIDGERVKLRIDVVHEQPRGQRAASLGVFDVLATEVD
Ga0318510_100158914	3300032064	Soil	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLRIDVVHEQPRARWASLGVFDVLATEVD
Ga0306924_113932232	3300032076	Soil	RLYASAPGGKTMAIKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETVHVDGERVKLRIDVVHEQTHARAASLGVFDVLATEVD
Ga0306924_117045231	3300032076	Soil	EDQTRAAALREGAKVMAVEATWHVKLTRRDHSRIAFTDYLNRVPKRRAIITLHIDGKRVKLRIDVVHEQPRVRAAGLGVFDVLATEVD
Ga0318540_104102471	3300032094	Soil	MAVKATWHVKLTRGDHARTAFTDYLNRVPKRGAIETLHVDGERVKLKIDVVHEQPHARAASLGV
Ga0306920_1040714561	3300032261	Soil	MTAKATWHVKLTRRDHSRTAFTDYLNRAPKRGAITTLHVDGEQVKLRIDVVRGQPPHTRAAASLGVFDVLATEID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051421

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences