Metagenome / Metatranscriptome Family F051409

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051409
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	56 residues
Representative Sequence	NVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Number of Associated Samples	131
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.47 %
% of genes near scaffold ends (potentially truncated)	95.83 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.028 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (9.028 % of family members)
Environment Ontology (ENVO)	Unclassified (30.556 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.972 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 13.41% Coil/Unstructured: 86.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00106	adh_short	11.11
PF02073	Peptidase_M29	5.56
PF13419	HAD_2	3.47
PF13620	CarboxypepD_reg	2.78
PF00069	Pkinase	2.78
PF07366	SnoaL	2.78
PF06441	EHN	1.39
PF12680	SnoaL_2	1.39
PF04107	GCS2	1.39
PF13478	XdhC_C	1.39
PF13242	Hydrolase_like	1.39
PF01740	STAS	0.69
PF13517	FG-GAP_3	0.69
PF10067	DUF2306	0.69
PF00154	RecA	0.69
PF07676	PD40	0.69
PF10150	RNase_E_G	0.69
PF13240	zinc_ribbon_2	0.69
PF05960	DUF885	0.69
PF01797	Y1_Tnp	0.69
PF00490	ALAD	0.69
PF00702	Hydrolase	0.69
PF08308	PEGA	0.69
PF05163	DinB	0.69
PF07944	Glyco_hydro_127	0.69
PF12705	PDDEXK_1	0.69
PF01739	CheR	0.69
PF01042	Ribonuc_L-PSP	0.69
PF05299	Peptidase_M61	0.69
PF13426	PAS_9	0.69
PF04255	DUF433	0.69
PF00989	PAS	0.69
PF00773	RNB	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.11
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	5.56
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.39
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.39
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.69
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.69
COG4776	Exoribonuclease II	Transcription [K]	0.69
COG3975	Predicted metalloprotease, contains C-terminal PDZ domain	General function prediction only [R]	0.69
COG3533	Beta-L-arabinofuranosidase, GH127 family	Carbohydrate transport and metabolism [G]	0.69
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.69
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.69
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	0.69
COG0557	Exoribonuclease R	Transcription [K]	0.69
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.69
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.69
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.03 %
Unclassified	root	N/A	15.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.03 %
Unclassified	root	N/A	15.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.03 %
Unclassified	root	N/A	15.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.56 %
Unclassified	root	N/A	15.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	35.42 %
Unclassified	root	N/A	15.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.42 %
Unclassified	root	N/A	15.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.33 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.78 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.42 %
Unclassified	root	N/A	15.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.33 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.39 %
Chloroflexi bacterium 13_1_40CM_55_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	0.69 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.69 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.42 %
Unclassified	root	N/A	15.97 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	1.39 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.39 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.69 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.69 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.69 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.69 %
Chloroflexi bacterium 13_1_40CM_55_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.42 %
Unclassified	root	N/A	15.97 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.39 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	1.39 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.69 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.69 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.69 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.69 %
Chloroflexi bacterium 13_1_40CM_55_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_1100092	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300002245\|JGIcombinedJ26739_100214291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1819	Open in IMG/M
3300004082\|Ga0062384_100835549	Not Available	646	Open in IMG/M
3300004091\|Ga0062387_100109395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1506	Open in IMG/M
3300004092\|Ga0062389_102798282	Not Available	651	Open in IMG/M
3300004156\|Ga0062589_100122757	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300004635\|Ga0062388_101827084	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005290\|Ga0065712_10447939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300005330\|Ga0070690_100068631	All Organisms → cellular organisms → Bacteria → Acidobacteria	2300	Open in IMG/M
3300005331\|Ga0070670_100036140	All Organisms → cellular organisms → Bacteria	4252	Open in IMG/M
3300005331\|Ga0070670_100648562	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300005334\|Ga0068869_100351673	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300005364\|Ga0070673_100047459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3342	Open in IMG/M
3300005367\|Ga0070667_100964225	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005436\|Ga0070713_100517802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300005439\|Ga0070711_101684535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005466\|Ga0070685_10642593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300005546\|Ga0070696_100433542	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300005547\|Ga0070693_101527049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300005569\|Ga0066705_10121667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1575	Open in IMG/M
3300005764\|Ga0066903_101621441	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300005841\|Ga0068863_100147330	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300005843\|Ga0068860_100530207	Not Available	1178	Open in IMG/M
3300005843\|Ga0068860_102468866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	539	Open in IMG/M
3300006052\|Ga0075029_100084529	All Organisms → cellular organisms → Bacteria → Acidobacteria	1884	Open in IMG/M
3300006052\|Ga0075029_100319221	Not Available	995	Open in IMG/M
3300006052\|Ga0075029_100324549	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300006052\|Ga0075029_100794235	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006059\|Ga0075017_100040998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3082	Open in IMG/M
3300006059\|Ga0075017_100041608	All Organisms → cellular organisms → Bacteria	3062	Open in IMG/M
3300006102\|Ga0075015_100335061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300006162\|Ga0075030_100619238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300006173\|Ga0070716_100266017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300006176\|Ga0070765_101047677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300006806\|Ga0079220_11018147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300007076\|Ga0075435_101290037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300007788\|Ga0099795_10656336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300009088\|Ga0099830_10007228	All Organisms → cellular organisms → Bacteria → Acidobacteria	6558	Open in IMG/M
3300009093\|Ga0105240_10205619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2305	Open in IMG/M
3300009101\|Ga0105247_10017564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	4291	Open in IMG/M
3300009156\|Ga0111538_10548624	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1465	Open in IMG/M
3300009156\|Ga0111538_11809868	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300009174\|Ga0105241_10047653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	3259	Open in IMG/M
3300009176\|Ga0105242_11903494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300009177\|Ga0105248_13463441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300010376\|Ga0126381_101013674	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300010379\|Ga0136449_100767100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1601	Open in IMG/M
3300010397\|Ga0134124_10428467	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300010400\|Ga0134122_10428015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300010403\|Ga0134123_12479502	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300011270\|Ga0137391_10218602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1655	Open in IMG/M
3300011271\|Ga0137393_10368917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300011444\|Ga0137463_1362953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012200\|Ga0137382_10248343	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300012203\|Ga0137399_10607538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300012361\|Ga0137360_10071505	All Organisms → cellular organisms → Bacteria → Acidobacteria	2570	Open in IMG/M
3300012469\|Ga0150984_118865665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300012514\|Ga0157330_1073506	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012582\|Ga0137358_10055899	All Organisms → cellular organisms → Bacteria	2636	Open in IMG/M
3300012582\|Ga0137358_11114091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012927\|Ga0137416_11123597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300012929\|Ga0137404_10849940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300012944\|Ga0137410_10473608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020	Open in IMG/M
3300012955\|Ga0164298_11521167	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300012960\|Ga0164301_11689525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300012986\|Ga0164304_10576488	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300012987\|Ga0164307_10298560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300014489\|Ga0182018_10003699	All Organisms → cellular organisms → Bacteria → Acidobacteria	13505	Open in IMG/M
3300014489\|Ga0182018_10331712	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300014969\|Ga0157376_10297056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1527	Open in IMG/M
3300015372\|Ga0132256_100068314	All Organisms → cellular organisms → Bacteria → Acidobacteria	3360	Open in IMG/M
3300015372\|Ga0132256_100323604	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300016341\|Ga0182035_11390431	Not Available	630	Open in IMG/M
3300016404\|Ga0182037_10566632	Not Available	960	Open in IMG/M
3300017932\|Ga0187814_10270615	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300017936\|Ga0187821_10247502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300017947\|Ga0187785_10180168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	907	Open in IMG/M
3300017955\|Ga0187817_10115421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1697	Open in IMG/M
3300017972\|Ga0187781_10953293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300017994\|Ga0187822_10269369	Not Available	591	Open in IMG/M
3300018058\|Ga0187766_11271015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300018060\|Ga0187765_10672486	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300018085\|Ga0187772_10540760	Not Available	824	Open in IMG/M
3300019890\|Ga0193728_1030535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2680	Open in IMG/M
3300021403\|Ga0210397_10467102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300021420\|Ga0210394_10341765	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300021433\|Ga0210391_10050211	All Organisms → cellular organisms → Bacteria	3320	Open in IMG/M
3300021559\|Ga0210409_10498926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300021858\|Ga0213852_1478993	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300021861\|Ga0213853_10011199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300025509\|Ga0208848_1048567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300025893\|Ga0207682_10043117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1845	Open in IMG/M
3300025900\|Ga0207710_10039951	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300025904\|Ga0207647_10128584	Not Available	1490	Open in IMG/M
3300025916\|Ga0207663_11227710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300025917\|Ga0207660_11181648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300025926\|Ga0207659_10604728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300025928\|Ga0207700_11686246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300025939\|Ga0207665_10030368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3570	Open in IMG/M
3300025941\|Ga0207711_10489774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300025961\|Ga0207712_10188359	Not Available	1627	Open in IMG/M
3300025972\|Ga0207668_10916524	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300025986\|Ga0207658_11829331	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300026075\|Ga0207708_10497698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300026089\|Ga0207648_10301338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1437	Open in IMG/M
3300026377\|Ga0257171_1089566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_55_7	544	Open in IMG/M
3300026502\|Ga0255350_1087428	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300027516\|Ga0207761_1085123	Not Available	615	Open in IMG/M
3300027565\|Ga0209219_1069843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300027676\|Ga0209333_1208964	Not Available	513	Open in IMG/M
3300027765\|Ga0209073_10301286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300027862\|Ga0209701_10443381	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300027895\|Ga0209624_10309739	Not Available	1052	Open in IMG/M
3300027895\|Ga0209624_10748146	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300027910\|Ga0209583_10656901	Not Available	541	Open in IMG/M
3300028380\|Ga0268265_10537759	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300028380\|Ga0268265_10903788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300028798\|Ga0302222_10401388	Not Available	535	Open in IMG/M
3300030000\|Ga0311337_10614691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300030492\|Ga0302212_1086974	Not Available	842	Open in IMG/M
3300031234\|Ga0302325_10052481	All Organisms → cellular organisms → Bacteria	8091	Open in IMG/M
3300031234\|Ga0302325_10140379	All Organisms → cellular organisms → Bacteria	4361	Open in IMG/M
3300031236\|Ga0302324_101354407	Not Available	935	Open in IMG/M
3300031249\|Ga0265339_10017371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4264	Open in IMG/M
3300031525\|Ga0302326_10062372	All Organisms → cellular organisms → Bacteria	6980	Open in IMG/M
3300031538\|Ga0310888_10668115	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031546\|Ga0318538_10689989	Not Available	554	Open in IMG/M
3300031715\|Ga0307476_10249285	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1296	Open in IMG/M
3300031718\|Ga0307474_11176091	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031736\|Ga0318501_10702497	Not Available	558	Open in IMG/M
3300031793\|Ga0318548_10409246	Not Available	665	Open in IMG/M
3300031941\|Ga0310912_11310362	Not Available	549	Open in IMG/M
3300031942\|Ga0310916_10936352	Not Available	725	Open in IMG/M
3300031962\|Ga0307479_12091616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300032000\|Ga0310903_10429279	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300032160\|Ga0311301_10487909	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300032180\|Ga0307471_103561558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300032805\|Ga0335078_11245899	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300033134\|Ga0335073_12123158	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300033158\|Ga0335077_11037499	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300033289\|Ga0310914_10034390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4072	Open in IMG/M
3300033290\|Ga0318519_10915289	Not Available	542	Open in IMG/M
3300033475\|Ga0310811_11059980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300034819\|Ga0373958_0147498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.69%
Host-Associated	Host-Associated	24.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.81%
Plants	Host-Associated → Plants	24.31%
Aquatic	Environmental → Aquatic	13.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.36%
Freshwater	Environmental → Aquatic → Freshwater	6.94%
Sediment	Environmental → Aquatic → Sediment	6.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.94%
Peat	Environmental → Terrestrial → Peat	5.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.42%
Loam	Environmental → Terrestrial → Soil → Loam	13.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.08%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.17%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.47%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.47%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.08%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.39%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.39%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.39%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.39%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.39%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.39%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030492	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0407.00002120	2162886012	Miscanthus Rhizosphere	LWKTFGEGAKVGVTGVGGPRFSSDGSAYAYVYSQALSVAYVVKGLK
JGIcombinedJ26739_1002142913	3300002245	Forest Soil	DGASVYVVSNHLREKTAKVYRVDPGTGKMELWKAFGEDMAVGVTGVGGPHFSSDGSAYAYVYGQALSQAYVVKGLK*
Ga0062384_1008355492	3300004082	Bog Forest Soil	DIATGKRQLWKIFGTQLQAGVESVGPPRFSSDMSAYAYVYSTTLSEAYVVKGFK*
Ga0062387_1001093952	3300004091	Bog Forest Soil	KIYRVNVTTGKMDFWKSFGEAAAPGASVGAPHFSADGSAYAYVYYNTLSQAYVVRGLK*
Ga0062389_1027982821	3300004092	Bog Forest Soil	RVDIATGKRQLWKIFGTQLQAGVESVGPPRFSSDMSAYAYVYSTTLSEAYVVKGFK*
Ga0062589_1001227573	3300004156	Soil	GKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLK*
Ga0062388_1018270842	3300004635	Bog Forest Soil	HDKIAQVYRVNLITGKMEPWKTFGDHLTVGVTGVGGPHISSDGNAYAYVYSQVLSQAYVVKGLR*
Ga0065712_104479391	3300005290	Miscanthus Rhizosphere	YRVNVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK*
Ga0070690_1000686313	3300005330	Switchgrass Rhizosphere	VYRVNVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK*
Ga0070670_1000361401	3300005331	Switchgrass Rhizosphere	NVTTGKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLK*
Ga0070670_1006485622	3300005331	Switchgrass Rhizosphere	SLYALSSQRREGAAKVYRVNVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK*
Ga0068869_1003516732	3300005334	Miscanthus Rhizosphere	GEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLK*
Ga0070673_1000474591	3300005364	Switchgrass Rhizosphere	SRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSTDGSAYAYVYSQALSVAYVVKGLK*
Ga0070667_1009642252	3300005367	Switchgrass Rhizosphere	KTFGEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLR*
Ga0070713_1005178021	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MEFWKTFGADLPAGVANVGGPRFSSDGNSYAYVYSQLLSQSYVVQGLK*
Ga0070711_1016845352	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RVNVVSGKMDFWKTFGADLPAGGAGVGGPHFSGDGNAYAYVYDQVLSEAYVVKGLK*
Ga0070685_106425932	3300005466	Switchgrass Rhizosphere	VNVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK*
Ga0070696_1004335422	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	YRVNVVTGKMELWKVFGANLPAGVASVGGPRFSIDGSAYAYVYSQVLSQAYVVKGLQ*
Ga0070693_1015270491	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQVLSQAYVVKGLK*
Ga0066705_101216672	3300005569	Soil	IPGLDAKYYISDWSPDGASVYALSSQRREGVARTYRVNVVSGKMDFWKTFGADLPAGGAGVGGPHFSGDGNAYAYVYDQVLSEAYVVKGLK*
Ga0066903_1016214411	3300005764	Tropical Forest Soil	TKVYRVSIAGGRMEFWKEFGTNLPAGTAGSGVATPRFSADGRAYAYIYVQVLSEAYVVKGLK*
Ga0068863_1001473301	3300005841	Switchgrass Rhizosphere	KVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLR*
Ga0068860_1005302073	3300005843	Switchgrass Rhizosphere	TGKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLR*
Ga0068860_1024688662	3300005843	Switchgrass Rhizosphere	YTLSGHSRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYAYVYSQALSVAYVVKGLK*
Ga0075029_1000845293	3300006052	Watersheds	LPAGGGGVGGPHFSSDGSAYAYVYDQVLCEAYVVKGLK*
Ga0075029_1003192211	3300006052	Watersheds	GDGLPAGAGAGGPRFSDDGTAYAYVYQQILSEAYVVKGLK*
Ga0075029_1003245492	3300006052	Watersheds	AKGFRVNIATGKMEPWKTFGDHIASGVTSVGGPRFSSDGSAYAYVYVQELSQAYLVRGLK
Ga0075029_1007942351	3300006052	Watersheds	TSGQLRERAAKLYQVNVTTGKMDLWKTFGGDLPAGVTRAFAPRISGDGSAYAYVYQQDLSVAYVVKGLK*
Ga0075017_1000409981	3300006059	Watersheds	GSGKMELWKTFGEGMTVGVTGVGGPHFSSDGSAYAYVYSQALSQAYVVKGLK*
Ga0075017_1000416084	3300006059	Watersheds	SKYYVSDWSPDGTSLYAISSQQRDGAAKVFRVNVKTGKMEFWKTFGANLPAGVASVGGPRFSTDGSAYAYVYAQILSQAYVVKGLK*
Ga0075015_1003350611	3300006102	Watersheds	KYYVSDWSPDGTSLYAISSQQRDGAAKVFRVNVKTGKMEFWKTFGANLPAGVASVGGPRFSTDGSAYAYVYAQILSQAYVVKGLK*
Ga0075030_1006192381	3300006162	Watersheds	KTFGADLPAGGGGVGGPHFSSDGSAYAYVYDQVLCEAYVVKGLK*
Ga0070716_1002660171	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VYALSSQRREGVARTYRVNVVSGKMDFWKTFGADLPAGGAGVGGPHFSGDGNAYAYVYDQVLSEAYVVKGLK*
Ga0070765_1010476771	3300006176	Soil	MELWKAFGEGMAVGVTGVGGPHFSSDGSAYAYVYGQALSQAYVVKGLK*
Ga0079220_110181472	3300006806	Agricultural Soil	GVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK*
Ga0075435_1012900372	3300007076	Populus Rhizosphere	AKVYRVNVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Ga0099795_106563361	3300007788	Vadose Zone Soil	KVNVTGWTSDGASVYVTPSHQRDRVATVYRANITTGKMELWKTFGNSGTNFGITGVSAPRMSTDGNAYAYVYSQSMSEAYVVKGLR*
Ga0099830_100072283	3300009088	Vadose Zone Soil	MNVGITGVSAPRMSSDGNAYAYVYSQAMSEAYVVKGLK*
Ga0105240_102056193	3300009093	Corn Rhizosphere	GAAQVYRVNITTGKMEFWKTFGANLPAGVANVGGPRFSSDGSAYAYVYSRVLSQAYVVKGLK*
Ga0105247_100175641	3300009101	Switchgrass Rhizosphere	FGEGAKVGVTGVGGPRFSSDGSAYAYVYSQALSVAYVVKGLK*
Ga0111538_105486241	3300009156	Populus Rhizosphere	HSRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSTDGSAYAYVYSQALSVAYVVKELK*
Ga0111538_118098681	3300009156	Populus Rhizosphere	DRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLK*
Ga0105241_100476535	3300009174	Corn Rhizosphere	TATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYAYVYSQALSVAYVVKGLK*
Ga0105242_119034941	3300009176	Miscanthus Rhizosphere	FGANLPAGVASVGGPRFSIDGSAYAYVYSQVLSQAYVVKGLQ*
Ga0105248_134634412	3300009177	Switchgrass Rhizosphere	VNITTGKMEFWKTFGANLPAGVANVGGPRFSSDGSAYAYVYSRVLSQAYVVKGLK*
Ga0126381_1010136741	3300010376	Tropical Forest Soil	TGKKEFWKAFGTNLPAGTAGAGVGLPRFSADGGAYAYVYSQVLSEAYAVKGLK*
Ga0136449_1007671002	3300010379	Peatlands Soil	WKAFGEGLPAGASPGGPRFSSDGSAYAYVYAQTLSVAYVVKGLK*
Ga0134124_104284672	3300010397	Terrestrial Soil	GGISGVAPPHFSSDGSAYAYVYVRTLSQAYVAKGLK*
Ga0134122_104280151	3300010400	Terrestrial Soil	KTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK*
Ga0134123_124795021	3300010403	Terrestrial Soil	GAKVGVTGVGGPRFSSDGSAYAYVYSQALSVAYVVKGLK*
Ga0137391_102186023	3300011270	Vadose Zone Soil	GGMNVGITGVSAPRMSSDGNAYAYVYSQAMSEAYVVKGLK*
Ga0137393_103689171	3300011271	Vadose Zone Soil	LRERTAKVYRVNLDSGKMEFWTTFGESIPVGVTQVGGPNLSGDGSAYAYVYGQALSQAYVVKGLK*
Ga0137463_13629532	3300011444	Soil	YRVNVATGKMEFWKTFGANLPAGVANVGAPHFSPDGSAYAYVYSQVLSQAYVMHGLK*
Ga0137382_102483431	3300012200	Vadose Zone Soil	DGASVYVTPSHQRDRVATVYRANITTGKMELWKTFGNSGTNFGITGVSAPRMSTDGNAYAYVYSQSMSEAYVVKGLR*
Ga0137399_106075383	3300012203	Vadose Zone Soil	KTFSAGTNVGITGVGGPRLSSDGTAYAYVYSQSMSEAYVAKGLK*
Ga0137360_100715053	3300012361	Vadose Zone Soil	VNVATGKMELWKVFGANLPAGVASVGGPRFSNDGSAYAYVYSQVLSQAYVVKGLQ*
Ga0150984_1188656652	3300012469	Avena Fatua Rhizosphere	AAQVYRVNTTTGKMEFWKTFGANLPAGVANVGGPRFSADGSAYAYVYSRVLSQAYVVKGLK*
Ga0157330_10735062	3300012514	Soil	SLYTLSGHSRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSTDGSAYAYVYSQALSVAYVVKGLK*
Ga0137358_100558993	3300012582	Vadose Zone Soil	MEWWKTFGAGNSVGITGVSGPRLSDDGNAYAYVYSQAMSEAYVAKGLK*
Ga0137358_111140911	3300012582	Vadose Zone Soil	VYVTPSHQRDRVATVYRANITTGKMELWKTFGNSGTNFGITGVSAPRMSTDGNAYAYVYSQSMSEAYVVRGLK*
Ga0137416_111235973	3300012927	Vadose Zone Soil	PDGKSVYVASSHQRDRVATVYRVEVATGKMELWKTFSAGTSVGITGVGGPRLSTDGTAYAYVYSQSMSEAYVAKGLK*
Ga0137404_108499402	3300012929	Vadose Zone Soil	EFWKTFGANLPAGVANIGAPHFSPDGSAYAYVYSQVLSQAYVMHGLK*
Ga0137410_104736082	3300012944	Vadose Zone Soil	GITGVSGPRLSDDGNAYAYVYSQAMSEAYVAKGLK*
Ga0164298_115211672	3300012955	Soil	TFGADLPAGGAGIGRPRFSADGSAYVYVYDQVLSQAYVVKGLK*
Ga0164301_116895252	3300012960	Soil	LPAGVASVGGPRFSSDGNAYAYVYSQVLSQAYVVKGLK*
Ga0164304_105764881	3300012986	Soil	NVATGKMDFWKTFGADLPAGGAGIGRPRFSADGSAYVYVYDQVLSQAYVVKGLK*
Ga0164307_102985602	3300012987	Soil	SSQRREGAAKVYRVNVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK*
Ga0182018_100036991	3300014489	Palsa	RTKIYRTNIATGKKEFWKEFGAGLPTGASGAGRMLFSVDGRAYVYVYDQVLSEAYAVKGLK*
Ga0182018_103317121	3300014489	Palsa	KIYRTNIATGKKEFWKEFGAGLPTGASGAGRMLFSVDGKAYVYVYDQVLSEAYAVKGLK*
Ga0157376_102970563	3300014969	Miscanthus Rhizosphere	SGHSRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYAYVYSQALSVAYVVKGLK*
Ga0132256_1000683141	3300015372	Arabidopsis Rhizosphere	FGENLPAGVASVGGPRFSSDGSAFAYVYSQILSQAYVVKGLK*
Ga0132256_1003236041	3300015372	Arabidopsis Rhizosphere	ATYYVTGWTPEGTSLYTLSGHSRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLK*
Ga0182035_113904311	3300016341	Soil	SGRMEFWKEFGTNLPAGTAGSGVATPRFSADGSAYAYIYVQVLSEAYVVKGLK
Ga0182037_105666321	3300016404	Soil	RWRSGSTKVYRVNIASGRMEFWKEFGTNLPAGTAGSGVATPRFSADGSAYAYIYVQVLSEAYVVKGLK
Ga0187814_102706152	3300017932	Freshwater Sediment	TFGTDLPAGVVAVGGPHLSADGSAYAYVYVQVLSEAYVVRGLK
Ga0187821_102475022	3300017936	Freshwater Sediment	LRARTAKVYRMNISTGKLEFWKTFGENMPVGVTQVGGPNFSSDGSAYAYVYGQALSQAYVVKGLK
Ga0187785_101801683	3300017947	Tropical Peatland	DVVTGKMDYWKTFGTNLPVGAGGVGRPRQSADGSAYVYVYQLNLSQAYVVKGLK
Ga0187817_101154214	3300017955	Freshwater Sediment	KTFGDELAAGSHAGAPGFSSDGSAYAYVYDQTLSEAYVVKGLK
Ga0187781_109532931	3300017972	Tropical Peatland	ATGKKEFWKEFGTNLPAGTAGAGVGLPRFSADGGAYAYVYSQVLSEAYAVKGLK
Ga0187822_102693691	3300017994	Freshwater Sediment	IATGKMDFWKEFGETLPAGAGAGGPRFSTDGSAYIYVYEQTLAVAYVVKGLR
Ga0187766_112710151	3300018058	Tropical Peatland	ERAAKVYRVNLATGKMELWKEFGTNLAAGVAGVSPPRFSADMSAYAYSYNQILCEAYVVKGFK
Ga0187765_106724862	3300018060	Tropical Peatland	NPHTGKMELWKTFGADLPAGVTNTGEVIFSSDGRAYAYRYSQVLSQAYVARGLQ
Ga0187772_105407602	3300018085	Tropical Peatland	TTGKMELWKTLGENVPAGVTNVANPIVSSDGSAYAYIYVQVLSQAYVVRGLR
Ga0193728_10305354	3300019890	Soil	VNVVSGKMDFWKTFGADLPAGGAGVGGPHFSRDGNAYAYVYDQVLSEAYVVKGLK
Ga0210397_104671021	3300021403	Soil	TGKTEPWKTFGAGVGAGVTETGAPQFSSDGSAYAYVYIQNLSNAYVVTGLK
Ga0210394_103417652	3300021420	Soil	MELWKAFGEGMAVGVTGVGGPHFSSDGSAYAYVYGQALSQAYVVKGLK
Ga0210391_100502113	3300021433	Soil	ARTQAEVDRVEIATGKKELWKVFGAQLQAGVDSVGPPRFSSDMSAYAYVYTTTLSEAYVVQGFQ
Ga0210409_104989261	3300021559	Soil	SSEEREGAAKVYRVNVATGKMELWKVFGANLPAGVASVGGPRFSNDGSAYAYVYSQVLSQAYVVKGLQ
Ga0213852_14789931	3300021858	Watersheds	TFGEGLPAGAGAGGPRFSRDGAAYAYVYQQILSEAYVVKGLK
Ga0213853_100111991	3300021861	Watersheds	KLYQVNVTTGKMDLWKTFGGDLPAGVTRAFAPRISGDGSAYAYVYQQDLSVAYVVKGLK
Ga0208848_10485671	3300025509	Arctic Peat Soil	GKMDLWKTFGDSVTVGVTGVGGPHFSSDGSAYAYVYGQALSQAYVVKGLK
Ga0207682_100431173	3300025893	Miscanthus Rhizosphere	KMELWKTFGEGAKVGVTGVGGPRFSTDGSAYAYVYSQALSVAYVVKGLK
Ga0207710_100399514	3300025900	Switchgrass Rhizosphere	EGAKVGVTGVGGPRFSSDGSAYAYVYSQALSVAYVVKGLK
Ga0207647_101285841	3300025904	Corn Rhizosphere	PPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Ga0207663_112277101	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RVNVVSGKMDFWKTFGADLPAGGAGVGGPHFSGDGNAYAYVYDQVLSEAYVVKGLK
Ga0207660_111816482	3300025917	Corn Rhizosphere	GWTPDGTSLYTLSGHSRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSTDGSAYAYVYSQALSVAYVVKGLK
Ga0207659_106047282	3300025926	Miscanthus Rhizosphere	TSLYALSSQRREGAAKVYRVNVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Ga0207700_116862461	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GKMEFWKTFGADLPAGVANVGGPRFSSDGNSYAYVYSQLLSQSYVVQGLK
Ga0207665_100303685	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LDAKYYISDLSPEGDKVYALSSQRREGVARTYRVNVVSGKMDFWKTFGADLPAGGAGVGGPHFSGDGNAYAYVYDQVLSEAYVVKGLK
Ga0207711_104897741	3300025941	Switchgrass Rhizosphere	VNITTGKMEFWKTFGANLPAGVANVGGPRFSSDGSAYAYVYSRVLSQAYVVKGLK
Ga0207712_101883592	3300025961	Switchgrass Rhizosphere	GENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Ga0207668_109165242	3300025972	Switchgrass Rhizosphere	LSGHSRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSTDGSAYAYVYSQALSVAYVVKGLK
Ga0207658_118293311	3300025986	Switchgrass Rhizosphere	GTSLYTLSGHSRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLR
Ga0207708_104976982	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	NVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Ga0207648_103013382	3300026089	Miscanthus Rhizosphere	GAAKVYRVNVTTGKMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Ga0257171_10895662	3300026377	Soil	HQRDRVAAVYRVDVATGKMELWKTFGAGNSVGITGVSGPRLSDDGNAYAYVYSQAMSEAYVAKGLK
Ga0255350_10874281	3300026502	Soil	FRVNVTTGKMELWKTLGANIPAGVVFVGGPHFSRDSAAYAYLYFQVLSQAYVVRGLK
Ga0207761_10851231	3300027516	Tropical Forest Soil	AGGAGVGGPHFSRDGRAYAYEYGQNLSQAYVVRGLK
Ga0209219_10698432	3300027565	Forest Soil	GKMDFWKTFGAELPAGGAGVGGPHFSRDGNAYAYVYDQVLSEAYVVKGLK
Ga0209333_12089641	3300027676	Forest Soil	SLLVYSRIGGSGSKKLFRVNISTGQMEFWKEFGTKLPAGGAGVGPPRFSSDMSAYAYPYDQSLCEAYVVKGFK
Ga0209073_103012862	3300027765	Agricultural Soil	GGNLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Ga0209701_104433812	3300027862	Vadose Zone Soil	SQVYRVNVATGKMELWKTFGEGTPTGAAGVSPPLFSSDQSAYAYVYSQVLSQAYVVKGLK
Ga0209624_103097391	3300027895	Forest Soil	KKEFWKEFGAGLPTGASGAGRMLFSVDGKAYVYVYDQVLSEAYAVRGLK
Ga0209624_107481462	3300027895	Forest Soil	YAASNRTSDKIAKVYRVNVATGKMEAWKSFGEQAGAGLIGASAPLFSADGSAYAYGYGQILSEAYVVTGLK
Ga0209583_106569011	3300027910	Watersheds	VYALSSQQRHGAAKVYRVNAVTGKMDYWKTFGADLPTGGAGIGRPRFSTDGSAYVYVYDQVLSQAYVVRGLK
Ga0268265_105377591	3300028380	Switchgrass Rhizosphere	GVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLK
Ga0268265_109037881	3300028380	Switchgrass Rhizosphere	KMEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Ga0302222_104013881	3300028798	Palsa	TQAEVDRVDIATGKKEFWKIFGTQLQAGVESVGPPRFSSDMSAYAYIYSTTLSEAYVVKGFR
Ga0311337_106146911	3300030000	Fen	QKETMAKVYRVNVTTGKMEYWKTFGDHIASGVTAVSGPQFSSDGRAYAYIYVQLLSEAFVVKGLR
Ga0302212_10869742	3300030492	Fen	ETVAKVYRLDIATGKMEYWKTFGDHIASGITAVSGPHYSSDGSAYAYIYVQELSEAFVVKGLK
Ga0302325_1005248111	3300031234	Palsa	VDRVDIATGKKEFWKIFGTQLQAGVESVGPPRFSSDMSAYAYVYSTTLSEAYVVKGFR
Ga0302325_101403791	3300031234	Palsa	VDRVDIATGKKEFWKIFGTQLQAGVESVGPPRFSSDMSAYAYIYSTTLSEAYVVKGFR
Ga0302324_1013544071	3300031236	Palsa	FWKEFGAGLPTGASGAGRMLFSVDGQAYVYVYDQVLSEAYTVKGLK
Ga0265339_100173718	3300031249	Rhizosphere	ATGKMDLWRTFGGDLPAGATKVAAPKLSRDESAYAYLYYQDLSVGYVVKGLK
Ga0302326_1006237210	3300031525	Palsa	KKEFWKIFGTQLQAGVESVGPPRFSSDMSAYAYVYSTTLSEAYVVKGFR
Ga0310888_106681152	3300031538	Soil	LYTLSGHSRDRTATVYRTNVTTGKMELWKTFGEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLK
Ga0318538_106899892	3300031546	Soil	ATGRMEYWKTFGENIASGVVAVSAPRFSDDGSAYSYLYVQLLSEAYVVKGLK
Ga0307476_102492853	3300031715	Hardwood Forest Soil	FGEGLPAGAGAAGPRFSADGTAYVYVYSQNLSVGYVVKGLK
Ga0307474_111760911	3300031718	Hardwood Forest Soil	FGTELGAGAAAGVPHFSSDGSAYAYLYFQDLTVAYVVRGLN
Ga0318501_107024971	3300031736	Soil	AAKVYRVDVATGKMEYWKTFGENIASGVVGVSVPRFSNDGTTYAYFYVQVLSQAYVVKGL
Ga0318548_104092462	3300031793	Soil	SSLDTAPTAKVYRVDVATGKMEYWKTFGENIASGVVGVSVPRFSNDGTTYAYFYVQVLSQAYVVKGLK
Ga0310912_113103621	3300031941	Soil	EFGTNLPAGTAGSGVATPRFSADGSAYAYIYVQVLSEAYVVKGLK
Ga0310916_109363521	3300031942	Soil	QDRWRSGSTKVYRVNIASGRMEFWKEFGTNLPAGTAGSGVATPRFSADGSAYAYIYVQVLSEAYVVKGLK
Ga0307479_120916161	3300031962	Hardwood Forest Soil	WTADGTSLYAVSSLRRERTAKVYRVNATTGKMEFWKTFGEGLPAGAGAAGPRFSADGTAYVYVYSQNLSVGYVVKGLK
Ga0310903_104292791	3300032000	Soil	MELWKTFGEGAKVGVTGVGGPRFSSDGSAYVYVYSQALSVAYVVKGLK
Ga0311301_104879092	3300032160	Peatlands Soil	VATGKKEPWKVFGNQLQAGVESVGPPHFSSDMSAYAYVYSTTLSEAYVVKGFK
Ga0307471_1035615582	3300032180	Hardwood Forest Soil	ELWKAFGEGMAVGVTGVGGPHFSSDGSAYAYVYGQALSQAYVVKGLK
Ga0335078_112458991	3300032805	Soil	KMEYWKTFGENIASGVVAVSAPRFSDDGSAYSYLYVQLLSEAYVVKGLK
Ga0335073_121231581	3300033134	Soil	KKVYRVDPLTGKIELWKQFGANVPVGAAGVGPPFFSADGRAYAYVYSQILSEAYMITGLK
Ga0335077_110374992	3300033158	Soil	TSGADNARIAKMYRVDIATGKMEYWKTFGENIASGVVAVSAPRFSDDGSAYSYLYVQLLSEAYVVKGLK
Ga0310914_100343901	3300033289	Soil	VASFQDRLQNGSTKVYRVNIATGKMEFWKEFGTDLPAGTAGAGVGAPKFSAHGEAYAYVYSQVLSEAYAVKGLK
Ga0318519_109152891	3300033290	Soil	LPAGTAGAGVGAPKFSAHGEAYAYVYSQVLSEAYAVKGLK
Ga0310811_110599801	3300033475	Soil	GVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK
Ga0373958_0147498_5_151	3300034819	Rhizosphere Soil	MEFWKTFGENLPAGVASVGGPRFSSDGSAYAYVYSQILSQAYVVKGLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051409

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences