Metagenome / Metatranscriptome Family F051391

Basic Information
Family ID	F051391
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	45 residues
Representative Sequence	MRPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR
Number of Associated Samples	121
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.72 %
% of genes near scaffold ends (potentially truncated)	21.53 %
% of genes from short scaffolds (< 2000 bps)	84.72 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Bacteria (98.611 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.861 % of family members)
Environment Ontology (ENVO)	Unclassified (44.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.833 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.78% β-sheet: 0.00% Coil/Unstructured: 47.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF05163	DinB	40.28
PF03466	LysR_substrate	20.14
PF00126	HTH_1	16.67
PF01625	PMSR	6.94
PF12680	SnoaL_2	3.47
PF00440	TetR_N	2.78
PF00873	ACR_tran	1.39
PF00072	Response_reg	0.69
PF07477	Glyco_hydro_67C	0.69
PF07690	MFS_1	0.69
PF00378	ECH_1	0.69
PF07687	M20_dimer	0.69
PF00529	CusB_dom_1	0.69
PF01546	Peptidase_M20	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	40.28
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	6.94
COG3661	Alpha-glucuronidase	Carbohydrate transport and metabolism [G]	0.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.61 %
Unclassified	root	N/A	1.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.61 %
Unclassified	root	N/A	1.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.61 %
Unclassified	root	N/A	1.39 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.36 %
Unclassified	root	N/A	1.39 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.50 %
Unclassified	root	N/A	1.39 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	19.44 %
Unclassified	root	N/A	1.39 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	12.50 %
Unclassified	root	N/A	1.39 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	12.50 %
Unclassified	root	N/A	1.39 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	12.50 %
Unclassified	root	N/A	1.39 %
Sphingomonas sabuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sabuli	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01BP8O8	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
2170459017\|G14TP7Y02I914F	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101190997	Not Available	660	Open in IMG/M
3300000955\|JGI1027J12803_105903655	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300000956\|JGI10216J12902_101980959	All Organisms → cellular organisms → Bacteria → Proteobacteria	1290	Open in IMG/M
3300001431\|F14TB_105278968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300001842\|RCM30_1030446	All Organisms → cellular organisms → Bacteria → Proteobacteria	1726	Open in IMG/M
3300002914\|JGI25617J43924_10005339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3904	Open in IMG/M
3300002914\|JGI25617J43924_10251825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300003990\|Ga0055455_10122856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300004092\|Ga0062389_101737247	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300004479\|Ga0062595_100962410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	728	Open in IMG/M
3300004633\|Ga0066395_10304181	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005179\|Ga0066684_10153335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1463	Open in IMG/M
3300005330\|Ga0070690_101388611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	565	Open in IMG/M
3300005332\|Ga0066388_101126958	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300005355\|Ga0070671_102093962	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005434\|Ga0070709_11316287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300005440\|Ga0070705_100230605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1288	Open in IMG/M
3300005445\|Ga0070708_100101818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2631	Open in IMG/M
3300005445\|Ga0070708_100443988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1224	Open in IMG/M
3300005467\|Ga0070706_101830218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	552	Open in IMG/M
3300005540\|Ga0066697_10716004	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005554\|Ga0066661_10036995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2730	Open in IMG/M
3300005610\|Ga0070763_10002177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	6918	Open in IMG/M
3300005618\|Ga0068864_102122806	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005713\|Ga0066905_100476579	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005764\|Ga0066903_102393236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1021	Open in IMG/M
3300005764\|Ga0066903_102766609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	952	Open in IMG/M
3300005841\|Ga0068863_101319249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300005843\|Ga0068860_101538588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300005937\|Ga0081455_10060867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3180	Open in IMG/M
3300005985\|Ga0081539_10055854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2194	Open in IMG/M
3300005994\|Ga0066789_10047530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1883	Open in IMG/M
3300006038\|Ga0075365_11161895	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300006041\|Ga0075023_100605014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300006050\|Ga0075028_100362858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300006050\|Ga0075028_100385968	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300006173\|Ga0070716_101060958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	644	Open in IMG/M
3300006176\|Ga0070765_100653716	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300006578\|Ga0074059_12097592	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300007255\|Ga0099791_10509533	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300007265\|Ga0099794_10528313	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300007788\|Ga0099795_10260770	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300009038\|Ga0099829_10092179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2342	Open in IMG/M
3300009088\|Ga0099830_11700075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300009089\|Ga0099828_11411381	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300009098\|Ga0105245_10368627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1427	Open in IMG/M
3300009143\|Ga0099792_10835587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300009143\|Ga0099792_11135285	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300009239\|Ga0103858_10156173	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300010043\|Ga0126380_10488779	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300010043\|Ga0126380_11869937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300010046\|Ga0126384_11461273	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300010046\|Ga0126384_12203083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	530	Open in IMG/M
3300010159\|Ga0099796_10367012	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300010361\|Ga0126378_11381151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300010362\|Ga0126377_10371275	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300010362\|Ga0126377_11187869	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300010362\|Ga0126377_13233096	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300010366\|Ga0126379_12608841	Not Available	603	Open in IMG/M
3300010397\|Ga0134124_11034317	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300010880\|Ga0126350_12219489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300011270\|Ga0137391_10033908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	4301	Open in IMG/M
3300011270\|Ga0137391_10137257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2127	Open in IMG/M
3300011271\|Ga0137393_10518809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300011271\|Ga0137393_11104629	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300011271\|Ga0137393_11160710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300012189\|Ga0137388_10094061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2558	Open in IMG/M
3300012205\|Ga0137362_10504000	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300012209\|Ga0137379_11185467	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300012359\|Ga0137385_11287756	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300012361\|Ga0137360_11711136	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012362\|Ga0137361_10263089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1573	Open in IMG/M
3300012469\|Ga0150984_106401531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sabuli	522	Open in IMG/M
3300012683\|Ga0137398_11267152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300012685\|Ga0137397_10202652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1476	Open in IMG/M
3300012917\|Ga0137395_10475274	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012918\|Ga0137396_10664671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300012923\|Ga0137359_10371874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1270	Open in IMG/M
3300012923\|Ga0137359_11285244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300012924\|Ga0137413_10314979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1098	Open in IMG/M
3300012924\|Ga0137413_10340685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1060	Open in IMG/M
3300012925\|Ga0137419_10469901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	994	Open in IMG/M
3300012925\|Ga0137419_10770610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300012927\|Ga0137416_10041025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3175	Open in IMG/M
3300012927\|Ga0137416_10317908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1296	Open in IMG/M
3300012927\|Ga0137416_10538382	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300012927\|Ga0137416_11748022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300012929\|Ga0137404_10200588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1690	Open in IMG/M
3300012943\|Ga0164241_10330682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300012944\|Ga0137410_10397378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1110	Open in IMG/M
3300012957\|Ga0164303_10526388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300012971\|Ga0126369_13706218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300014166\|Ga0134079_10699450	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300015371\|Ga0132258_10549938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2893	Open in IMG/M
3300018468\|Ga0066662_10984549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	834	Open in IMG/M
3300018482\|Ga0066669_10782642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	844	Open in IMG/M
3300019877\|Ga0193722_1013573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2085	Open in IMG/M
3300019881\|Ga0193707_1041123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1494	Open in IMG/M
3300019882\|Ga0193713_1042330	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300019887\|Ga0193729_1002987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8371	Open in IMG/M
3300019889\|Ga0193743_1017649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3775	Open in IMG/M
3300019889\|Ga0193743_1214807	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300020004\|Ga0193755_1174875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300020021\|Ga0193726_1017452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3700	Open in IMG/M
3300020021\|Ga0193726_1228929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300020034\|Ga0193753_10098745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1460	Open in IMG/M
3300020140\|Ga0179590_1074082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	900	Open in IMG/M
3300021086\|Ga0179596_10100127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1315	Open in IMG/M
3300021086\|Ga0179596_10521274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300021178\|Ga0210408_10019807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5379	Open in IMG/M
3300021478\|Ga0210402_11151945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300021560\|Ga0126371_10415052	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300022533\|Ga0242662_10122562	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300022756\|Ga0222622_10025016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3102	Open in IMG/M
3300024330\|Ga0137417_1103555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2253	Open in IMG/M
3300025552\|Ga0210142_1076895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300025910\|Ga0207684_10275817	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300025922\|Ga0207646_10170666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1964	Open in IMG/M
3300026095\|Ga0207676_11016779	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300026095\|Ga0207676_11177684	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300026118\|Ga0207675_101001757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300026291\|Ga0209890_10073871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1216	Open in IMG/M
3300026551\|Ga0209648_10179600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1639	Open in IMG/M
3300026557\|Ga0179587_10536577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300027164\|Ga0208994_1059764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300027603\|Ga0209331_1094030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300027835\|Ga0209515_10187925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1247	Open in IMG/M
3300027846\|Ga0209180_10417341	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300027855\|Ga0209693_10018834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3309	Open in IMG/M
3300027874\|Ga0209465_10203510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300027894\|Ga0209068_10363281	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300027894\|Ga0209068_10657005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300028172\|Ga0256798_1141595	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300028536\|Ga0137415_10073299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3284	Open in IMG/M
3300028573\|Ga0265334_10008452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4375	Open in IMG/M
3300028768\|Ga0307280_10282175	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300029636\|Ga0222749_10059636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1707	Open in IMG/M
3300031231\|Ga0170824_107672334	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300031238\|Ga0265332_10206063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	817	Open in IMG/M
3300031239\|Ga0265328_10443955	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031712\|Ga0265342_10378432	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
(restricted) 3300031825\|Ga0255338_1172938	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	11.81%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.17%
Plants	Host-Associated → Plants	11.81%
Aquatic	Environmental → Aquatic	8.33%
Solid Waste	Engineered → Solid Waste	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.86%
Sediment	Environmental → Aquatic → Sediment	4.17%
Freshwater	Environmental → Aquatic → Freshwater	2.78%
Marine	Environmental → Aquatic → Marine	1.39%
Roots	Host-Associated → Plants → Roots	0.69%
Grass	Engineered → Solid Waste → Grass	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.50%
Loam	Environmental → Terrestrial → Soil → Loam	14.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.17%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.69%
Sand	Environmental → Terrestrial → Soil → Sand	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.69%
Composting	Engineered → Solid Waste → Grass → Composting	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.47%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.69%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.69%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.08%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.39%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.69%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Enriched Soil Aggregate	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Enriched Soil Aggregate	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.69%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001842	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM30, ROCA_DNA203_0.2um_MCP-S_C_2b	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009239	Microbial communities of water from Amazon river, Brazil - RCM11	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028172	Metatranscriptome of enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0949-MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031825 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_02927650	2170459009	Grass Soil	MHPIPFPILLPDRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR
4ZMR_04531440	2170459017	Switchgrass, Maize And Mischanthus Litter	MRPIPFPILTGDHQPHIVRAHRLRGAVRPSLIREVVRWISGAAR
INPhiseqgaiiFebDRAFT_1011909972	3300000364	Soil	MMRPIPFPILLGDRQPHIVRAHRMRSAVVANLIRDFARWVSAAAR*
JGI1027J12803_1059036552	3300000955	Soil	MMRPIPFPILLADRQPHVVRAHRMRSGVVAGLVRDFIRWVSVAAR*
JGI10216J12902_1019809592	3300000956	Soil	MLPIPFPVLVHDRQVYLLRAHRMRSAAIADLVRKVARLVSSAAR*
F14TB_1052789682	3300001431	Soil	MLLPLPFPVLVGDRQAYIVRAHRIRGAVVAGLIRNVVRWVSAAAR*
RCM30_10304461	3300001842	Marine Plankton	MRPIPFPVLTGDHQPHIVRAHRLRGAVAATLVRDLVRWISAAAR*
JGI25617J43924_100053393	3300002914	Grasslands Soil	MHPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR*
JGI25617J43924_102518251	3300002914	Grasslands Soil	MRPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR*
Ga0055455_101228562	3300003990	Natural And Restored Wetlands	MRPIPFPVLLSDRQAYVERAHRLRNAAVGGLFRDFVRWVSAAAR*
Ga0062389_1017372472	3300004092	Bog Forest Soil	MLPIPFPVLVPDRQAYVVRAHRLRGAIVAGLIHDLARWVSTAAR*
Ga0062595_1009624102	3300004479	Soil	MLPIPFPVLVPDRQAYVVRAHRLRGAVVAGLIRDVVRWVSAASR*
Ga0066395_103041813	3300004633	Tropical Forest Soil	RPWRFAMRPIPFALLTTDRQAYIDRAHRLRGAAVAGLVREFVRWVSAAAR*
Ga0066684_101533352	3300005179	Soil	MLPIPFPVLVADRQAYIVRAHRMRSAVVAGLIRDLARWVSAVSR*
Ga0070690_1013886111	3300005330	Switchgrass Rhizosphere	MRPIPFPILTGDHQPHIVRAHRLRGAVAAGLIRDFVRWISVAAR*
Ga0066388_1011269582	3300005332	Tropical Forest Soil	MRPIPFALLTTDRQAYIDRAHRLRGAAVAGLVREFVRWVSAAAR*
Ga0070671_1020939621	3300005355	Switchgrass Rhizosphere	MMRPIPFPILVPDRKAYVVEAHRMRSAVVAGLIRDLVRWVSAAAR*
Ga0070709_113162872	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ISVPLSLEVLMHPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR*
Ga0070705_1002306052	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRPIPFPILLADRQPHVVRAHRMRSGVVAGLVRDFIRWVSVAAR*
Ga0070708_1001018184	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRPIPFPILLADRQPHVVRAHRMRSAVVAGLVRDFIRWVSVAAR*
Ga0070708_1004439881	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VPMRPIPFPILLADRQAYVVRAHRMRGAVVATLIRDLARWVSAAAR*
Ga0070706_1018302182	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHPIPFPILLADRQAYVVRAHRMRGAVVATLIRDLARWVSAAAR*
Ga0066697_107160042	3300005540	Soil	MLPIPFPVLVADRQAYIVRAHRMRSAVVAGLIRDLARWVSAASR*
Ga0066661_100369951	3300005554	Soil	MLPIPFPVLVPDRQAYVVRAHRLRSAVVAGLIRDVARWMSAASR*
Ga0070763_100021772	3300005610	Soil	MHPIPFPVLLPDRQAYVVRAHRLRGATVATLIRDLARWISAAAG*
Ga0068864_1021228061	3300005618	Switchgrass Rhizosphere	EEILMRPIPFPILTGDHQPHIVRAHRLRGAVAAGLIRDFVRWISVAAR*
Ga0066905_1004765793	3300005713	Tropical Forest Soil	MRPIPFPILLALMEDRQAYVTRAHRLRGAVMANLIRDVARWVTAAAR*
Ga0066903_1023932362	3300005764	Tropical Forest Soil	MRPIPFALLTTDRRAYIDRAHRLRGAAVAGLVREFVRWVSAAAR*
Ga0066903_1027666092	3300005764	Tropical Forest Soil	MLPIPFPVLVADRQAHIVRAHRMRSAVVAGLIRDVVRWVSAAAR*
Ga0068863_1013192492	3300005841	Switchgrass Rhizosphere	MLLPPPFPVLVGDRQAYIMRAHRIRGAVVAGLIRDVVGWVSAAAR*
Ga0068860_1015385881	3300005843	Switchgrass Rhizosphere	MLLPLPFPVLVGDRQAYIVRAHRIRGAVVAGLIRD
Ga0081455_100608673	3300005937	Tabebuia Heterophylla Rhizosphere	MLPIPFPILVADRQAYVVRAHRMRSAVVAGLIRDVVRWVSTASR*
Ga0081539_100558543	3300005985	Tabebuia Heterophylla Rhizosphere	MFRPIPFPVLVPDRKAYVAEAHRLRSAVVAGLIRDLVRWVSAASR*
Ga0066789_100475303	3300005994	Soil	MRPIPFPILLADRQPHIVRAHRLRGAVVATLIRDLARWISAAAR*
Ga0075365_111618951	3300006038	Populus Endosphere	PILTGDHQVHIVRAHRLRSAAAANLVRDLVRWISTAAR*
Ga0075023_1006050142	3300006041	Watersheds	MLPIPFPALVPDRQAYVVRAHRMRGAVVADLIRELARWASAASR*
Ga0075028_1003628582	3300006050	Watersheds	MRPIPFPILLADRQPHIVRAHRLRGAVVATLVRDLARWISAAAR*
Ga0075028_1003859683	3300006050	Watersheds	MLPIPFPALVPDRQAYVVRAHRLRGAVVAGLIRDLARWVSAASR*
Ga0070716_1010609582	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MHPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVS
Ga0070765_1006537162	3300006176	Soil	LEVLMRPIPFPILLLADRQPHIVRAHRMRGAVVATLIRDLARWISAAAR*
Ga0074059_120975922	3300006578	Soil	MMRPIPFPILLGDRQPHIVRAHRMRSAVVANLIRGFARWVSAAAR*
Ga0099791_105095331	3300007255	Vadose Zone Soil	MMRPIPFPILLADRQPHIVRAHRMRSAVVANLIRDFARWVSAAAR*
Ga0099794_105283132	3300007265	Vadose Zone Soil	SLQLLEVSMMRPIPFPILLADRQPHIVRAHRMRSAVVANLIRDFARWVSAAAR*
Ga0099795_102607701	3300007788	Vadose Zone Soil	PIPFPILLADRQPHIVRAHRMRSAVEANLIRDFARWVSAAAR*
Ga0099829_100921792	3300009038	Vadose Zone Soil	MRPIPFPILLADRQPHVMRAHHMRSAVVAGLVRDFIRWVSVAAR*
Ga0099830_117000752	3300009088	Vadose Zone Soil	MHPIPFPILLADRQVYIVRAHRMRGAVVAILIRDLARWVSAAAR*
Ga0099828_114113811	3300009089	Vadose Zone Soil	MRPIPFPILLADRQPHVVRGQRMRSAVVAGLVRDFIRWVSVAAR*
Ga0105245_103686273	3300009098	Miscanthus Rhizosphere	MRPIPFPILTGDHQPYIARAHRMRGAVAAGLIREVVRWISGAAR*
Ga0099792_108355871	3300009143	Vadose Zone Soil	MRPIPFPILLADRKPHVVRAHRMRSAVVAGLVRDFIRWVSVAAR*
Ga0099792_111352851	3300009143	Vadose Zone Soil	MHPIPFPILLADRQAYVVRAHRMRGAVVATLIRDLARWVSAVAR*
Ga0103858_101561731	3300009239	River Water	ISMRPIPFPVLTGDHQPHIVRAHRLRGAVAATLVRDLVRWISAAAR*
Ga0126380_104887792	3300010043	Tropical Forest Soil	MRPIPFSLLTTDRQAYIDRAHRLRGAAVAGLVREFVRWVSAAAR*
Ga0126380_118699371	3300010043	Tropical Forest Soil	MPLPIPFPVLVPDRQAYVVRAHRMRSAVVAGLIRDVVRWVSVAAR*
Ga0126384_114612731	3300010046	Tropical Forest Soil	TMRPIPFALLTTDRQAYIDRAHRLRGAAVAGLVREFVRWVSAAAR*
Ga0126384_122030832	3300010046	Tropical Forest Soil	MRPIPFPLLTTDRQAYIDRAHRLRGAAVAGLVREFVRWVSAAAR*
Ga0099796_103670122	3300010159	Vadose Zone Soil	MLPIPFPALVPDRQAYVVRAHRMRSAVVANLIRDLARWVSAASR*
Ga0126378_113811511	3300010361	Tropical Forest Soil	MRPIPFALLTTDRQAYIDRAHRLRGAAVAGLVREFVRWVS
Ga0126377_103712753	3300010362	Tropical Forest Soil	MSEVSMRPIPFPILLALMEDRQAYVTRAHRLRGAVMANLIRDVARWVTAAAR*
Ga0126377_111878691	3300010362	Tropical Forest Soil	MRPIPFPILVGLMEDRQAYVTRAHRLRGAVMASLLRDIARWVTAAAR*
Ga0126377_132330962	3300010362	Tropical Forest Soil	MMRPIPFVLLATDRQVHIERAHRLRGAVVATLIRDFARWVSVASR*
Ga0126379_126088411	3300010366	Tropical Forest Soil	IKTNYRLPDEEIGFSPTLEVPMPLPIPFPVLVPDRQAYVVRAHRMRSAVVAGLIRDVVRWVSTASR*
Ga0134124_110343171	3300010397	Terrestrial Soil	MLPIPFPALVPDRQAYVVRAHRLRGVVVAGLIRDLARWVAAASR*
Ga0126350_122194891	3300010880	Boreal Forest Soil	MRPIPFPVLLADRQPHIVRAHRLRGVVVATLIRDLARWISAAAR*
Ga0137391_100339084	3300011270	Vadose Zone Soil	MRPIPFPILLADRQPHVVRAHHMRSAVVAGLVRDFIRWVSVAAR*
Ga0137391_101372572	3300011270	Vadose Zone Soil	MLPIPFPALVPDRQAYVVRAHRLRGAAMAGLIRDLARWVSAASR*
Ga0137393_105188092	3300011271	Vadose Zone Soil	MHPIPFPIPLADRQAYIVRAHRMRGAVVAILIRDLARWVSAAAR*
Ga0137393_111046292	3300011271	Vadose Zone Soil	MRPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVFAAAR*
Ga0137393_111607102	3300011271	Vadose Zone Soil	MLPIPFPALVPDRQAYVVRAHRLRGAVVAGLIRDLARWVSAAAL*
Ga0137388_100940613	3300012189	Vadose Zone Soil	MRPIPFPILLADRQPHVMRAHRVRSAVVAGLVRDFIRWVSVAAR*
Ga0137362_105040003	3300012205	Vadose Zone Soil	MRPIPFPILLADRQPHVMRAHCMRSAVVAGLVRDFIRWVSVAAR*
Ga0137379_111854672	3300012209	Vadose Zone Soil	MMRPIPFPILAADRQPHIVRAHRMRSAVVATLIRDFARWVSAAAR*
Ga0137385_112877562	3300012359	Vadose Zone Soil	LEVPMLPIPFPALVPDRQAYVVRAHRLRGAVVAGLIRDLARWASAASR*
Ga0137360_117111361	3300012361	Vadose Zone Soil	MLPIPFPALVPDRQAYIVRAHRMRSAVVAGLVRDFIRWVSVAAR*
Ga0137361_102630893	3300012362	Vadose Zone Soil	MFPIPFPVLVPDRQAYVVRAHRLRGAVVAGLIRDLARWVSVASR*
Ga0150984_1064015313	3300012469	Avena Fatua Rhizosphere	FPALVPDRQAYVVRAHRLRGAVAAGLIRNFARWVSVASR*
Ga0137398_112671521	3300012683	Vadose Zone Soil	MMRPIPFPILLADRQPHIVRAHRMRSAVMANLIRDFARWVSAAAR*
Ga0137397_102026522	3300012685	Vadose Zone Soil	MRPIPFPILLADRKPHVVRAHRMRSGVVAGLVRDFIRWVSVAAR*
Ga0137395_104752742	3300012917	Vadose Zone Soil	MRPIPFPILLADRQPHIVRARRLRSAVVAGLLRNFVRWVSVAAR*
Ga0137396_106646712	3300012918	Vadose Zone Soil	MRPIPFPILLADRQPHIVRAHRLRSAVVAGLLRDFVRWVSVAAR*
Ga0137359_103718742	3300012923	Vadose Zone Soil	MRPIPFPILLADRQSHVVRAHRMRSGVVAGLVRDFIRWVSVAAR*
Ga0137359_112852441	3300012923	Vadose Zone Soil	LNPKRYLMFPIPFPVLVPDRQAYVVRAHRLRGAVVAGLIRDLARWVSVASR*
Ga0137413_103149792	3300012924	Vadose Zone Soil	MHPIPFPILLADRQAYVVRAHRMRGAVVATLIRDLARWVFAAAR*
Ga0137413_103406852	3300012924	Vadose Zone Soil	MHPIPFPILLADRQAYVVRAHRMRGAVVATLIRDLVRWVSAAAR*
Ga0137419_104699012	3300012925	Vadose Zone Soil	MLPIPFPALVPDRQAYVVRAHRMRSAVVAGLIRDLARWVSAASR*
Ga0137419_107706102	3300012925	Vadose Zone Soil	MHPIPFPILLADRQAYVVRAHRMRGAVVATLIRNLVSWVSAAAR*
Ga0137416_100410254	3300012927	Vadose Zone Soil	MERINPLEGRVKFPSTLEVLMLPIPFPLLVADRQTYVVRAHCMRSAVVAGLIRDVVRWVSAAAR*
Ga0137416_103179083	3300012927	Vadose Zone Soil	MMRPIPFPILLHDRQAYIVRAHRMRSAVVANLIRDLARWVSAAAR*
Ga0137416_105383822	3300012927	Vadose Zone Soil	MYPIPFPILLPDRQAYVVRAHRMRGAVVATLIRDLARWVSAAAR*
Ga0137416_117480221	3300012927	Vadose Zone Soil	MRPIPFPILLADRQPHIVRAHRMRGAVVATLFRDLAR
Ga0137404_102005881	3300012929	Vadose Zone Soil	MHPIPFPILFADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR*
Ga0164241_103306821	3300012943	Soil	MRPIPFPVLTGDHQPHIVRAHRMRGAVAANLIREVVRWI
Ga0137410_103973783	3300012944	Vadose Zone Soil	MMLPVPFPVLTGDRQAYIMRAHRIRSAVVASLIRDVVRWVSAASR*
Ga0164303_105263881	3300012957	Soil	MMRPIPFPILLGDRQPHIVRAHRMRSAVVANLIRDFA
Ga0126369_137062182	3300012971	Tropical Forest Soil	MPLPIPFPVLVPDRQAYVVRAHRMRSAVVAGLIRDVVRWVSTASR*
Ga0134079_106994501	3300014166	Grasslands Soil	MLPIPFPALVPDRQAYIARAHRIRGAVVASLIRDLARWVSVASR*
Ga0132258_105499384	3300015371	Arabidopsis Rhizosphere	MMLPIPFPVLAADRQAHVVRAHRLRSAVVAGLVRDVVRWVSIAAR*
Ga0066662_109845492	3300018468	Grasslands Soil	MLPIPFPVLVPDRQAYVVRAHRLRSAVVAGLIRDVARWVSAASR
Ga0066669_107826422	3300018482	Grasslands Soil	MLPIPFPVLVADRQAYIVRAHRMRSAVVAGLIRDLARWVSAVSR
Ga0193722_10135731	3300019877	Soil	MHPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLVRWVSAAAR
Ga0193707_10411233	3300019881	Soil	MHPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0193713_10423302	3300019882	Soil	MMRPIPFPILLADRQPHIVRAHRMRSAVVANLIRDLARWVSAAAR
Ga0193729_10029876	3300019887	Soil	MLPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0193743_10176495	3300019889	Soil	MHPIPFPILLADRQAYVVRAHRMRGAVVATLIRDLVRWVSAAAR
Ga0193743_12148072	3300019889	Soil	MMRPIPFPILLGDRQVHITRAHRMRGAVMANLIRDFARWVSAAAR
Ga0193755_11748752	3300020004	Soil	MLPIPFPILLADRQPYIVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0193726_10174524	3300020021	Soil	MHPIPFPVLLPDRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0193726_12289291	3300020021	Soil	LMHPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0193753_100987451	3300020034	Soil	FPILLADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0179590_10740822	3300020140	Vadose Zone Soil	MHPIPFPILLADRQAYVVRAHRMRGAVVATLIRDLARWVFAAAR
Ga0179596_101001273	3300021086	Vadose Zone Soil	MMRPIPFPILLADRQPHIVRAHRMRSAVVANLIRDFARWVSAAAR
Ga0179596_105212742	3300021086	Vadose Zone Soil	EVRFFPTLEVPMLPIPFPALVPDRQAYVVRAHRMRSAVVAGLIRDLARWVSAAAR
Ga0210408_100198077	3300021178	Soil	MHPIPFPVLLPDRQAYVVRAHRLRGAVVATLIRDLARWISAAAR
Ga0210402_111519452	3300021478	Soil	MRPIPFPILLADRQAYVVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0126371_104150523	3300021560	Tropical Forest Soil	MRPIPFALLTTDRRAYIDRAHRLRGAAVAGLVREFVRWVSAAAR
Ga0242662_101225623	3300022533	Soil	PIPFPALVPDRRAYVVLAHRMRGAVVAGLIRELARWASAASR
Ga0222622_100250165	3300022756	Groundwater Sediment	MMRPIPFPILLGDRQPHIVRAHRMRSAVVANLIRDFARWVSAAAR
Ga0137417_11035551	3300024330	Vadose Zone Soil	MMRPIPFPILLHDRQAYIVRAHRMRSAVVANLIRDLARWVSAAAR
Ga0210142_10768952	3300025552	Natural And Restored Wetlands	MRPIPFPVLLSDRQAYVERAHRLRNAAVGGLFRDFVRWVSAAAR
Ga0207684_102758173	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRPIPFPILLADRQPHVVRGHRMRSAVVGGLVRDFIRWVSVAAR
Ga0207646_101706662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRPIPFPILLADRQPHVVRAHRMRSGVVAGLVRDFIRWVSVAAR
Ga0207676_110167792	3300026095	Switchgrass Rhizosphere	MLLPLPFPVLVGDRQTYIVRAHRIRGAVVAGLIRNVVRWVSAAAR
Ga0207676_111776841	3300026095	Switchgrass Rhizosphere	FPILTGDHQPHIVRAHRLRGAVAAGLIRDFVRWISVAAR
Ga0207675_1010017572	3300026118	Switchgrass Rhizosphere	MRPIPFPILTGDHQAHIVRAHRMRGAVAANIVREFVRWI
Ga0209890_100738711	3300026291	Soil	MRPIPFPILLADRQPHIVRAHRLRGAVVATLIRDLARWISAAAR
Ga0209648_101796003	3300026551	Grasslands Soil	MRPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0179587_105365772	3300026557	Vadose Zone Soil	MRPIPFPILLADRKPHVVRAHRMRSAVVAGLVRDFIRWVSVAAR
Ga0208994_10597642	3300027164	Forest Soil	MLPIPFPILLADRQAYVVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0209331_10940302	3300027603	Forest Soil	MRPIPFPVLLADRQPHIVRAHRMRGAVVATLIRDLARWISAAAR
Ga0209515_101879252	3300027835	Groundwater	MLPIPYPFLATDHQAHIVRAHRMRSAVMAGLIRDIARWVSFAAR
Ga0209180_104173412	3300027846	Vadose Zone Soil	MRPIPFPILLADRQPHVMRAHHMRSAVVAGLVRDFIRWVSVAAR
Ga0209693_100188344	3300027855	Soil	MHPIPFPVLLPDRQAYVVRAHRLRGATVATLIRDLARWISAAAG
Ga0209465_102035103	3300027874	Tropical Forest Soil	RRPWRFAMRPIPFALLTTDRQAYIDRAHRLRGAAVAGLVREFVRWVSAAAR
Ga0209068_103632812	3300027894	Watersheds	MRPIPFPILLADRQPHIVRAHRLRGAVVATLVRDLARWISAAAR
Ga0209068_106570052	3300027894	Watersheds	MLPIPFPALVPDRQAYVVRAHRLRGAVVAGLIRDLARWVSAASR
Ga0256798_11415952	3300028172	Enriched Soil Aggregate	PIPFPILTGDHQPHIVRAHRMRSAVAANLVRDLVRWISAAAR
Ga0137415_100732992	3300028536	Vadose Zone Soil	MLPIPFPLLVADRQTYVVRAHCMRSAVVAGLIRDVVRWVSAAAR
Ga0265334_100084527	3300028573	Rhizosphere	MLPIPFPVLTGDHHPHIVRAHRLRSAVVAGLIRDVVRWVSVAAR
Ga0307280_102821752	3300028768	Soil	MMRPIPFPILLHDRQAYVVRAHRMRGAVVATLIRDLARWVSAAAR
Ga0222749_100596362	3300029636	Soil	MYPIPFPILLADRQAYIVRAHRMRGAVVATLIRDLVRWVSAAAR
Ga0170824_1076723342	3300031231	Forest Soil	MMRPIPFPILLADRQPHVVRAHRMRSAVVANLIRDFARWISAAAR
Ga0265332_102060632	3300031238	Rhizosphere	MMRPIPFPILLADRQPHIVRAHRMRSAVFAGLIRDIARWVSAAAR
Ga0265328_104439552	3300031239	Rhizosphere	MMRPIPFPILLADRQPHIVRAHRLRSAVFAGLIRDIARWVSAAAR
Ga0265342_103784322	3300031712	Rhizosphere	MMRPIPFPILLADRQTHIVRAHRMRSAVFAGLIRDIARWVSAAAR
(restricted) Ga0255338_11729381	3300031825	Sandy Soil	MRPIPFPVLAADRHTHIVRAHRIRGAVVATLIRDLARWVSAAAR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters