Metagenome Family F051322

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051322
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	70 residues
Representative Sequence	MPSSHNFERVYGPDTLKIMTTAFDNAHKCLPAKFRKNDQARRKLALLILRHIERGEHDPECLADSAVLDFLR
Number of Associated Samples	102
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.47 %
% of genes near scaffold ends (potentially truncated)	31.25 %
% of genes from short scaffolds (< 2000 bps)	85.42 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (17.361 % of family members)
Environment Ontology (ENVO)	Unclassified (35.417 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.417 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.00% β-sheet: 0.00% Coil/Unstructured: 51.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.69.2.1: Ypt/Rab-GAP domain of gyp1p	d2g77a1	2g77	0.70434
a.74.1.0: automated matches	d3mi9b1	3mi9	0.69686
c.2.1.0: automated matches	d7mf4a2	7mf4	0.68721
a.74.1.1: Cyclin	d2i53a1	2i53	0.68374
a.74.1.3: Retinoblastoma tumor suppressor domains	d1guxb_	1gux	0.67543

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF04392	ABC_sub_bind	4.86
PF04519	Bactofilin	2.78
PF00106	adh_short	2.08
PF07452	CHRD	2.08
PF00839	Cys_rich_FGFR	1.39
PF05985	EutC	1.39
PF09604	Potass_KdpF	1.39
PF00459	Inositol_P	1.39
PF09996	DUF2237	0.69
PF00536	SAM_1	0.69
PF00753	Lactamase_B	0.69
PF01650	Peptidase_C13	0.69
PF07883	Cupin_2	0.69
PF05231	MASE1	0.69
PF07690	MFS_1	0.69
PF13557	Phenol_MetA_deg	0.69
PF00884	Sulfatase	0.69
PF03928	HbpS-like	0.69
PF13343	SBP_bac_6	0.69
PF01370	Epimerase	0.69
PF03951	Gln-synt_N	0.69
PF12679	ABC2_membrane_2	0.69
PF09361	Phasin_2	0.69
PF08327	AHSA1	0.69
PF14715	FixP_N	0.69
PF01165	Ribosomal_S21	0.69
PF13545	HTH_Crp_2	0.69
PF01522	Polysacc_deac_1	0.69
PF00571	CBS	0.69
PF02775	TPP_enzyme_C	0.69
PF12680	SnoaL_2	0.69
PF01168	Ala_racemase_N	0.69
PF13426	PAS_9	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.86
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	2.78
COG4302	Ethanolamine ammonia-lyase, small subunit	Amino acid transport and metabolism [E]	1.39
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	0.69
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.69
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.69
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.69
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.69
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.69
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.61 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.86 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.69 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.17 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.69 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.17 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.78 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.69 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.69 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.17 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.08 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.69 %
Nitrobacter vulgaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	0.69 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.69 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.17 %
Bradyrhizobium sp. 197	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 197	1.39 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.69 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.69 %
Nitrobacter vulgaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	0.69 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.69 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT02FKCBP	Not Available	662	Open in IMG/M
2170459024\|GZTSFBX01DSA5O	Not Available	514	Open in IMG/M
2199352025\|deepsgr__Contig_14570	Not Available	795	Open in IMG/M
2199352025\|deepsgr__Contig_178323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2716	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2120117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1098	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10031030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1442	Open in IMG/M
3300003911\|JGI25405J52794_10052392	Not Available	876	Open in IMG/M
3300004479\|Ga0062595_100537196	Not Available	890	Open in IMG/M
3300005163\|Ga0066823_10069335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	673	Open in IMG/M
3300005165\|Ga0066869_10050304	Not Available	732	Open in IMG/M
3300005168\|Ga0066809_10034038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 197	1090	Open in IMG/M
3300005169\|Ga0066810_10180612	Not Available	520	Open in IMG/M
3300005332\|Ga0066388_100009594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7419	Open in IMG/M
3300005332\|Ga0066388_100254428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2396	Open in IMG/M
3300005332\|Ga0066388_100294671	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2266	Open in IMG/M
3300005332\|Ga0066388_100320511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2195	Open in IMG/M
3300005332\|Ga0066388_100674023	Not Available	1645	Open in IMG/M
3300005332\|Ga0066388_102763452	Not Available	896	Open in IMG/M
3300005332\|Ga0066388_103190586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838	Open in IMG/M
3300005332\|Ga0066388_103438896	Not Available	808	Open in IMG/M
3300005332\|Ga0066388_104812931	Not Available	687	Open in IMG/M
3300005332\|Ga0066388_105320894	Not Available	653	Open in IMG/M
3300005332\|Ga0066388_108005911	Not Available	528	Open in IMG/M
3300005335\|Ga0070666_10300245	Not Available	1143	Open in IMG/M
3300005434\|Ga0070709_10197955	Not Available	1421	Open in IMG/M
3300005437\|Ga0070710_10116937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1609	Open in IMG/M
3300005439\|Ga0070711_100233925	Not Available	1434	Open in IMG/M
3300005547\|Ga0070693_100331718	Not Available	1035	Open in IMG/M
3300005615\|Ga0070702_101122867	Not Available	629	Open in IMG/M
3300005713\|Ga0066905_100104782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1930	Open in IMG/M
3300005713\|Ga0066905_100107017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	1914	Open in IMG/M
3300005713\|Ga0066905_100303792	Not Available	1254	Open in IMG/M
3300005713\|Ga0066905_100417995	Not Available	1093	Open in IMG/M
3300005713\|Ga0066905_100424873	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300005713\|Ga0066905_100939009	Not Available	759	Open in IMG/M
3300005713\|Ga0066905_101023599	Not Available	729	Open in IMG/M
3300005713\|Ga0066905_101712776	Not Available	578	Open in IMG/M
3300005713\|Ga0066905_101748471	Not Available	572	Open in IMG/M
3300005713\|Ga0066905_102198595	Not Available	514	Open in IMG/M
3300005764\|Ga0066903_100128438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3554	Open in IMG/M
3300005764\|Ga0066903_102947465	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300005764\|Ga0066903_107076416	Not Available	581	Open in IMG/M
3300005764\|Ga0066903_108356144	Not Available	529	Open in IMG/M
3300005937\|Ga0081455_10023558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5727	Open in IMG/M
3300005937\|Ga0081455_10060526	All Organisms → cellular organisms → Bacteria	3192	Open in IMG/M
3300005983\|Ga0081540_1026383	Not Available	3317	Open in IMG/M
3300006050\|Ga0075028_100903885	Not Available	544	Open in IMG/M
3300006057\|Ga0075026_100036119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2280	Open in IMG/M
3300006175\|Ga0070712_101164687	Not Available	670	Open in IMG/M
3300006175\|Ga0070712_101746317	Not Available	545	Open in IMG/M
3300006806\|Ga0079220_10542118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300007822\|Ga0104325_103798	Not Available	1060	Open in IMG/M
3300009090\|Ga0099827_10291440	Not Available	1379	Open in IMG/M
3300009168\|Ga0105104_10077413	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300009551\|Ga0105238_13053084	Not Available	502	Open in IMG/M
3300009792\|Ga0126374_11111453	Not Available	627	Open in IMG/M
3300010043\|Ga0126380_10202579	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300010043\|Ga0126380_10858879	Not Available	749	Open in IMG/M
3300010047\|Ga0126382_10823767	Not Available	794	Open in IMG/M
3300010047\|Ga0126382_10897839	Not Available	766	Open in IMG/M
3300010047\|Ga0126382_12220387	Not Available	528	Open in IMG/M
3300010159\|Ga0099796_10403751	Not Available	600	Open in IMG/M
3300010358\|Ga0126370_10749529	Not Available	864	Open in IMG/M
3300010359\|Ga0126376_11152255	Not Available	787	Open in IMG/M
3300010360\|Ga0126372_10091662	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300010360\|Ga0126372_10497707	Not Available	1144	Open in IMG/M
3300010360\|Ga0126372_10537711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1107	Open in IMG/M
3300010362\|Ga0126377_10795711	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300010362\|Ga0126377_10872025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	962	Open in IMG/M
3300010362\|Ga0126377_11224527	Not Available	821	Open in IMG/M
3300010366\|Ga0126379_13298899	Not Available	540	Open in IMG/M
3300010373\|Ga0134128_10365217	Not Available	1612	Open in IMG/M
3300010376\|Ga0126381_104745823	Not Available	523	Open in IMG/M
3300010396\|Ga0134126_10188256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	2477	Open in IMG/M
3300010398\|Ga0126383_11395628	Not Available	790	Open in IMG/M
3300010398\|Ga0126383_12435194	Not Available	608	Open in IMG/M
3300011003\|Ga0138514_100134567	Not Available	547	Open in IMG/M
3300011119\|Ga0105246_11821482	Not Available	582	Open in IMG/M
3300011271\|Ga0137393_10938981	Not Available	737	Open in IMG/M
3300012208\|Ga0137376_10716859	Not Available	863	Open in IMG/M
3300012937\|Ga0162653_100006462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300012948\|Ga0126375_11114143	Not Available	651	Open in IMG/M
3300012948\|Ga0126375_11897725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris	523	Open in IMG/M
3300012951\|Ga0164300_10210895	Not Available	959	Open in IMG/M
3300012957\|Ga0164303_10562413	Not Available	743	Open in IMG/M
3300012971\|Ga0126369_11620572	Not Available	737	Open in IMG/M
3300013308\|Ga0157375_11283460	Not Available	860	Open in IMG/M
3300013831\|Ga0120126_1006343	Not Available	854	Open in IMG/M
3300015371\|Ga0132258_10348023	All Organisms → cellular organisms → Bacteria → Proteobacteria	3663	Open in IMG/M
3300015371\|Ga0132258_10952437	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300015371\|Ga0132258_13081140	Not Available	1153	Open in IMG/M
3300016445\|Ga0182038_10001899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10880	Open in IMG/M
3300017944\|Ga0187786_10374538	Not Available	610	Open in IMG/M
3300017947\|Ga0187785_10042496	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300017966\|Ga0187776_10346079	Not Available	980	Open in IMG/M
3300018028\|Ga0184608_10390819	Not Available	605	Open in IMG/M
3300018029\|Ga0187787_10070053	Not Available	1074	Open in IMG/M
3300018032\|Ga0187788_10448321	Not Available	550	Open in IMG/M
3300018054\|Ga0184621_10150940	Not Available	837	Open in IMG/M
3300018072\|Ga0184635_10026011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2176	Open in IMG/M
3300018072\|Ga0184635_10322928	Not Available	599	Open in IMG/M
3300018076\|Ga0184609_10095049	Not Available	1333	Open in IMG/M
3300018081\|Ga0184625_10312369	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300019361\|Ga0173482_10315319	Not Available	694	Open in IMG/M
3300019879\|Ga0193723_1103242	Not Available	803	Open in IMG/M
3300020002\|Ga0193730_1042154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1321	Open in IMG/M
3300021344\|Ga0193719_10270154	Not Available	716	Open in IMG/M
3300021560\|Ga0126371_10322396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1676	Open in IMG/M
3300021560\|Ga0126371_10632937	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300025939\|Ga0207665_10698194	Not Available	798	Open in IMG/M
3300026035\|Ga0207703_12421613	Not Available	500	Open in IMG/M
3300026319\|Ga0209647_1036410	Not Available	2809	Open in IMG/M
3300027310\|Ga0207983_1017274	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300027560\|Ga0207981_1084080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 197	586	Open in IMG/M
3300027765\|Ga0209073_10206158	Not Available	749	Open in IMG/M
3300028719\|Ga0307301_10106950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300028784\|Ga0307282_10102303	All Organisms → cellular organisms → Bacteria → Proteobacteria	1330	Open in IMG/M
3300028791\|Ga0307290_10246748	Not Available	654	Open in IMG/M
3300028793\|Ga0307299_10049128	Not Available	1554	Open in IMG/M
3300028799\|Ga0307284_10350079	Not Available	598	Open in IMG/M
3300028802\|Ga0307503_10307955	Not Available	797	Open in IMG/M
3300028828\|Ga0307312_10552215	Not Available	761	Open in IMG/M
3300028884\|Ga0307308_10115992	Not Available	1277	Open in IMG/M
3300028885\|Ga0307304_10030712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1890	Open in IMG/M
3300031170\|Ga0307498_10041930	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300031170\|Ga0307498_10101879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	885	Open in IMG/M
3300031170\|Ga0307498_10392496	Not Available	544	Open in IMG/M
3300031231\|Ga0170824_127350253	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300031446\|Ga0170820_11192204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12252	Open in IMG/M
3300031446\|Ga0170820_11716485	Not Available	606	Open in IMG/M
3300031446\|Ga0170820_15513635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1323	Open in IMG/M
3300031455\|Ga0307505_10683194	Not Available	502	Open in IMG/M
3300031469\|Ga0170819_17617837	Not Available	984	Open in IMG/M
3300031716\|Ga0310813_10006310	All Organisms → cellular organisms → Bacteria	7413	Open in IMG/M
3300031720\|Ga0307469_10022258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3479	Open in IMG/M
3300031724\|Ga0318500_10743186	Not Available	501	Open in IMG/M
3300031763\|Ga0318537_10203400	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031779\|Ga0318566_10636828	Not Available	518	Open in IMG/M
3300031879\|Ga0306919_10001292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11933	Open in IMG/M
3300031897\|Ga0318520_10780127	Not Available	599	Open in IMG/M
3300032180\|Ga0307471_100440670	Not Available	1440	Open in IMG/M
3300032421\|Ga0310812_10070993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1385	Open in IMG/M
3300033004\|Ga0335084_10429771	Not Available	1359	Open in IMG/M
3300033433\|Ga0326726_10589236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.97%
Host-Associated	Host-Associated	8.33%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.72%
Plants	Host-Associated → Plants	8.33%
Aquatic	Environmental → Aquatic	6.25%
Solid Waste	Engineered → Solid Waste	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.64%
Sediment	Environmental → Aquatic → Sediment	5.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.78%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.39%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Peat	Environmental → Terrestrial → Peat	0.69%
Grass	Engineered → Solid Waste → Grass	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.56%
Loam	Environmental → Terrestrial → Soil → Loam	22.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.08%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.39%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%
Composting	Engineered → Solid Waste → Grass → Composting	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.39%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.17%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007822	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-8-2 Soapdenovo	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_00796730	2170459016	Switchgrass, Maize And Mischanthus Litter	VFARVEAPCNSKSHALKQEGHEIMHPSHNIERVYSPDTLKIMAAAFDNAHECLPAKFKENDRARHKLALLIMRHMERGEHDPTSLATLAVLDLLR
FD1_04690250	2170459024	Grass Soil	MASFHNFERVYSPDSLKIMTTAFDYAHKSLPAKFQENDRARHKLALLILRHVERGEHDPERLAASAVLDFLR
deepsgr_02385540	2199352025	Soil	MASFHNFERVYSPDSLKIMTTAFDYAHKSLPAKFQENDRARRKLALLILRHVERGEHDPERLAASAVLDFLR
deepsgr_03037890	2199352025	Soil	MPSSHNFERVYGPDTLKIMTTAFDNAHKCLPANFRKNDQARRKLALLILRHIERGEHDPECLADSAVLDFLR
ICChiseqgaiiDRAFT_21201173	3300000033	Soil	MHPSHNIERVYSPDTLKIMAAAFDNAHECLPAKFKENDRARHKLALLIMRHMERGEHDPTSLATLAVLDLLR*
AF_2010_repII_A1DRAFT_100310302	3300000597	Forest Soil	VPSMHYIERVYDPATLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERDPIRLADMAVLDFLR*
JGI25405J52794_100523922	3300003911	Tabebuia Heterophylla Rhizosphere	MVLSHNFERVYGPDTLKIITAAFDDAHECLPAEFKKSEHARRKLALLILRHMEHGERDPSRLAETAVLDFLR*
Ga0062595_1005371962	3300004479	Soil	MPSTHNSERVYDPDTLKIMTMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLDFLR*
Ga0066823_100693352	3300005163	Soil	FDNAHDYLPAEFQKSNHAKRKLALLILRHIERGERDPDRLAEAAVLDFLR*
Ga0066869_100503042	3300005165	Soil	MALVHNFDRVYGPDTLKTITAAFDNAHEYLPAEFQKSNHAKRKLALLILRHIERGERDPDRLAEAAVLDFLR*
Ga0066809_100340382	3300005168	Soil	YGPDTLKIITAAFDNAHECLPAEFKKSEHARRKLALLILRHIERGEHDPGRLAETAVMDFLR*
Ga0066810_101806122	3300005169	Soil	PDTLKTITAAFDNAHEYLPAEFQKSNHAKRKLALLILRHIERGERDPDRLAEAAVLDFLR
Ga0066388_1000095943	3300005332	Tropical Forest Soil	MVLSHNFERVYGPDTLKIITAAFDNAHECLPAEFKKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0066388_1002544282	3300005332	Tropical Forest Soil	MHYIERVYDPATLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERDPIRLADMAVLDFLR*
Ga0066388_1002946711	3300005332	Tropical Forest Soil	MVLSHNFERVYGPDTLKIITAAFDNAHECLPAEFKKSEHARRKLALLILRHVERGEHNPSRLAETAVLDFLR*
Ga0066388_1003205114	3300005332	Tropical Forest Soil	MALSHNFERVYDPDRLKIITAAFDNAYECLPAEFKKTDHARRKLALLILRHMEHGEHDPSRLAETAVRDFLR*
Ga0066388_1006740232	3300005332	Tropical Forest Soil	MVLSHNFERVYGPDTLKIITAAFDSAYECLPAEFKKSEYARRKLALLILRHIERGEHNSSRLAETAMLDFLR*
Ga0066388_1027634522	3300005332	Tropical Forest Soil	MVLSHSFERVYDPDTLKIITAAFDDAHECLPAEFKRSEHAKRKLAVLILRHIERGEHNPSRLAETAVLDFLR*
Ga0066388_1031905862	3300005332	Tropical Forest Soil	MASSDNFERVYGPETLKVITAAFDNAHECLPAEFQENDRARRKLALLILRHMDRGEHDPVRLADSAVLDFLR*
Ga0066388_1034388962	3300005332	Tropical Forest Soil	MVLSHNFERVYGPDTLKIITAAFDDAHECLPAEFKKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0066388_1048129311	3300005332	Tropical Forest Soil	MVLSHNFERVYGPDTLKIITAAFDDAHECLPAEFKKSEHARRKLALLILRHMEHGERNPSRLAETAVLDFLR*
Ga0066388_1053208941	3300005332	Tropical Forest Soil	MALSHNFERVYDPDTLKIITAAFDNAYECLPAEYKKSERARRKLALLILRHMKHGEHDPSRLAE
Ga0066388_1080059111	3300005332	Tropical Forest Soil	GTMVLSHNFERVYDPDTLKIITAAFDDAHECLPAAFKKSEHARRKLGLLILRHIERGERNPSRLTETAVLDFLR*
Ga0070666_103002453	3300005335	Switchgrass Rhizosphere	MPSTHNNERVYDPDTLKIMTMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLDFLR*
Ga0070709_101979552	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSHSFERVYGPDTLKIMTTAFDNAHKCLPAKLRKNDQARRKLALLILRHIERGEHDPECLADSAVLDFLR*
Ga0070710_101169371	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSHNFERVYGPDTLKIMTTAFDNAHKCLPAKLRKNDQARRKLALLILRHIERGEHDPECLADSAVLDFLR*
Ga0070711_1002339252	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSHNFERVYGPDTLKIMTTAFDNAHKCLPANFRKNDQARRKLALLILRHIERGEHDPECLADSAVLDFLR*
Ga0070693_1003317183	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	PDTLKIMTMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLDFLR
Ga0070702_1011228672	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPSTHNSERVYDPDTLKIMTMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLD
Ga0066905_1001047821	3300005713	Tropical Forest Soil	DTLKIITAAFDDAHECLPAEFKKSEHARRKLALLILRHMENGERNPSRLAETAVLDFLR*
Ga0066905_1001070172	3300005713	Tropical Forest Soil	MLSSHDIERVYGPDTLKVMTAAFDNAHQCLPAKYKENDHARRRLALLIIRHLERGEHNPSRLAETAVLDFLR*
Ga0066905_1003037923	3300005713	Tropical Forest Soil	MLSSHDIERVYGPDTLKIMTAAFDNAHQCLPAKFKENDHARRKLALLIIRHMERGEHNPVSLANMAILDFLR*
Ga0066905_1004179952	3300005713	Tropical Forest Soil	MSLSHNFERAYGPDTLKIITAAFDDAHECLPAEFQKNDHARRKLALLILRHMERGERDPARLAETAVLDFLR*
Ga0066905_1004248731	3300005713	Tropical Forest Soil	DTLKIITAAFDDAHECLPAEFKKSEHARRKLALLILRHMEHGERNPSRLAETAVLDFLR*
Ga0066905_1009390091	3300005713	Tropical Forest Soil	MVLSHNFERVYGPDTLKIITAAFDNAHECLPAEFKKSERARRKLALLILRHMEHGERDPSRLAETAVLDFLR*
Ga0066905_1010235991	3300005713	Tropical Forest Soil	KLPRKFLVTFEFKNRRGTMVLSHNFERVYDPETLKVITAAFDDAHECLPAEFRKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0066905_1017127762	3300005713	Tropical Forest Soil	MPSAHDIERVYGPDTLKLMATAFDNARNRLPKEFSESDQARHKLALLVMRHIGRGERDPVCLADLAVLDFMR*
Ga0066905_1017484712	3300005713	Tropical Forest Soil	MASSDTFERVYGPETLKVITAAFDSAHECLPAEFQENDRARRKLALLILRHIERGERDPERLADSAVLDFLR*
Ga0066905_1021985952	3300005713	Tropical Forest Soil	MALSHNFERVYGPDTLKIITAAFDDAHECLPAEFKKSERARRKLALLILRHMEHGERNPSRLAETAVLDFLR*
Ga0066903_1001284386	3300005764	Tropical Forest Soil	LSHNFERVYDPETLKVITAAFDDAHECLPAEFRKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0066903_1029474652	3300005764	Tropical Forest Soil	MVLSRNFERAYGPDTLKIITAAFDNAHECLPAEFKKSEHARRKLALIILRHIERGEHNPSRLAETAVLDFLR*
Ga0066903_1070764161	3300005764	Tropical Forest Soil	MPSMHYIERVYDPVTLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERDPIRLADMAVLDFLR*
Ga0066903_1083561441	3300005764	Tropical Forest Soil	MSLSRNFQRVYGPDTLKIITAAFDDAHECLPTEFQKNDHARRKLALLILRHMDRGERDPVRLAETAVLDFLR*
Ga0081455_100235585	3300005937	Tabebuia Heterophylla Rhizosphere	MMASSDTFERVYGPETLKVITAAFDSAHECLPAEFQENDCARRKLALLILRHIERGERDPERLADSAVLDFLR*
Ga0081455_100605261	3300005937	Tabebuia Heterophylla Rhizosphere	MVLSHNFERVYGPDTLKIITAAFDNAHECLPAEFKKNERARRKLALLILRHMEHGERDPSRLAETAVLDFLR*
Ga0081540_10263837	3300005983	Tabebuia Heterophylla Rhizosphere	MALSHNFERVYGPDTLKIISAAFDDAHECLPAEFKKSEPARRKLALLILRHMEHGERNPSRLAETAVLDFLR*
Ga0075028_1009038852	3300006050	Watersheds	MLSSHDIERVYGPDSLKIMTTAFDNAHGCLPTQFRGDDRARRKLALLVIRHMERGERNPVSLADLAMLDFLR*
Ga0075026_1000361193	3300006057	Watersheds	MASSHNVERVYGPDSLRIMAAAFDNAHKSLPAKFRENDRAKRKLALLILRHIERGEHDPGRLACSAVIDFLR*
Ga0070712_1011646871	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVHDIERVYDPDTLKIMTMAFDSAYECLPKRFRESDQARHRLALLVMRHIAHGERDPVCLADSAVLDFLR*
Ga0070712_1017463171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSHNFERVYGPDTLKIMTTAFDNAHKCLPAKLRKNDQARRKLALLILRHIERGEHDPECLADSAVLDF
Ga0079220_105421184	3300006806	Agricultural Soil	AFDNAHECLPRNLKESEHARRKLALLIMRHMERGQRDPSSLATVAMLDLLR*
Ga0104325_1037982	3300007822	Soil	MSSSRDIKRVYDPETLKIMTVAFDNARRCLPAKFRENDRARRKLALLVIRYFERGERNPVCLADSAVLEFLR*
Ga0099827_102914403	3300009090	Vadose Zone Soil	MASFHNFERVYDPDSLRIMAVAFDSAHKSLPAKFQENDRARRKLALLILRHIERGEHDPVRLANSAVLDFLR*
Ga0105104_100774135	3300009168	Freshwater Sediment	MLSSHDIERVYGPDTLKIMTAAFDNAHQCLPAKFKENDHARRRLALLIIRHMERGEHNPVSLANVAVLDFLR*
Ga0105238_130530841	3300009551	Corn Rhizosphere	MSCSPSHISVKGEGQMPSTHNSERVYDPDTLKIMTMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLDFLR*
Ga0126374_111114532	3300009792	Tropical Forest Soil	MALSHNFERVYDPDRLKIITAAFDNAYECLPAEFKKTDHARRKLALLILRHMEHGEHDPSRLAETAVR
Ga0126380_102025793	3300010043	Tropical Forest Soil	MALSHNFERVYGPDTLKIITAAFDDAHECLPAEFKKSEHARRKLALLILRHMENGERNPSRLAETAVLDFLR*
Ga0126380_108588792	3300010043	Tropical Forest Soil	MVLSHNFERVYDPDTLKIITAAFDDAHECLPAAFKKSEHARRKLALLILRHIERGERNPSRLTETAVLDFLR*
Ga0126382_108237672	3300010047	Tropical Forest Soil	MALSHNFERVYGPDTLKIITAAFDDAHECLPAEFKKSEHARRKLALLILRHMEHGERNPSRLAETAVLDFLR*
Ga0126382_108978392	3300010047	Tropical Forest Soil	MPSSHNFQRVYGPDTLKIMTTAFDNAHKCLPTKLRENDQARRKLALLILRHIERGEHDPECLADSAVLDFLR*
Ga0126382_122203872	3300010047	Tropical Forest Soil	MVLSHNFERVYDPETLKVITAAFDDAHECLPAEFKKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0099796_104037511	3300010159	Vadose Zone Soil	MASFRNFERVYDPDSLRIMAVAFDSAHKSLPAKFQENDRARRKLALLILRHIERGEHDPVRLANSAVLDFLR*
Ga0126370_107495292	3300010358	Tropical Forest Soil	MALSQNFERVYGPDTLKIITVAFDDAHECLPAEFQKNDHAKRKLALLILRHMDRGERDPVRLAETAVLDFLR*
Ga0126376_111522551	3300010359	Tropical Forest Soil	LKIITAAFDDAHECLPAAFKKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0126372_100916622	3300010360	Tropical Forest Soil	MVLSHNVERVYGPDTLKIITAAFDSAYECLPAEFKKSEYARRKLALLILRHIERGEHNSSRLAETAMLDFLR*
Ga0126372_104977072	3300010360	Tropical Forest Soil	MALSHNFERVYGPDTLKIMTAAFDNAHECLPAEFKKSEHARRKLALLILRHVERGEHNPSRLAETAVLDFLR*
Ga0126372_105377112	3300010360	Tropical Forest Soil	MHYIERVYDPVTLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERDPIRLADMAVLDFLR*
Ga0126377_107957112	3300010362	Tropical Forest Soil	MPSAHDIERVYGPDTLKLMATAFDNARNRLPKEFSESGQARHKLALLVMRHIGRGERDPVCLADLAVLDFMR*
Ga0126377_108720251	3300010362	Tropical Forest Soil	KIITAAFDDAHECLPAEFKKSEHARRKLALLVLRHMERGERDPSRLAETAVLDFLR*
Ga0126377_112245271	3300010362	Tropical Forest Soil	PRKFLVTFEFKNRRGTMVLSHNFERVYGPDTLKIITAAFDDAHECLPAEFKKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0126379_132988991	3300010366	Tropical Forest Soil	MALSHNFERVYDPDTLKIITAAFDDAHECLPAAFKKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0134128_103652174	3300010373	Terrestrial Soil	MPSTHNSERVYDPDTLKIMTMAFDNTHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLDFLR*
Ga0126381_1047458231	3300010376	Tropical Forest Soil	MVLSHNFERVYDPDTLKIITAAFDDAHECLPAEFRKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0134126_101882565	3300010396	Terrestrial Soil	ERVYDPDTLKIMTMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLDFLR*
Ga0126383_113956281	3300010398	Tropical Forest Soil	MALSHNFERVYGPDTLKIMTAAFDNAHECLPAEFQKSDHARRKLALLILRHVQHGEYDPSRLAETAVLDFLR*
Ga0126383_124351941	3300010398	Tropical Forest Soil	MALSHNFERVYGPDTLKIITAAFDDAHECLPAEFRKSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0138514_1001345671	3300011003	Soil	MLSSHDIERVYGPDTLKIMTVAFDNAHRCLPAKFKENDNARRKLALLIIRHMERGERNPMSLANVAVLD
Ga0105246_118214821	3300011119	Miscanthus Rhizosphere	MPSTHNSERVYDPDTLKIMAMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLDFLR*
Ga0137393_109389811	3300011271	Vadose Zone Soil	MASFHNFERVYDPDSLRIMALAFDIAHKSLPAKFQENDRARRKLALLILRHIERGEHDPVRLANSAVLDFLR*
Ga0137376_107168592	3300012208	Vadose Zone Soil	MPSANDIERVYGPDTLQIMTTAFDNAHKCLPAKLRENDRARRKLALLILRHIERGEHDPECLADSAVLDFLR*
Ga0162653_1000064622	3300012937	Soil	MPSSHNFERVYGPDTLKIVTSAFDKAHECLPSEFQKNDHARRKLALLILRHIERGEHDPVRLADSAVLDFLR*
Ga0126375_111141431	3300012948	Tropical Forest Soil	MALSHNFERVYGPDTLKIITAAFDDAHECLPAEFKKSEHARRKLALLILRHMEHGERNPSRLAETA
Ga0126375_118977251	3300012948	Tropical Forest Soil	TLKVITAAFDNAHECLPAEFQENDRARRKLALLILRHIERGERDPERLADSAVLDFLR*
Ga0164300_102108952	3300012951	Soil	MASFHNFERSYGPDSLKIMTVAFDNAHKSLPAKFQKNDRARRKLALLIFRHIERGEHDPVRLANSAVLDFLR*
Ga0164303_105624132	3300012957	Soil	MVLSHNFERVYGPDTLEIIIAAFDNAHECLPAEFKKSEHARRKLALLILRHMERGERDPSRLAETAVLDFLR*
Ga0126369_116205722	3300012971	Tropical Forest Soil	MVLSHNFERVYDPDTLKIITAAFDDAHECLPAEFKRSEHARRKLALLILRHIERGEHNPSRLAETAVLDFLR*
Ga0157375_112834602	3300013308	Miscanthus Rhizosphere	MPSTHNNERVYDPDTLKIMTMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLDF
Ga0120126_10063432	3300013831	Permafrost	MSSSRDFKRVYDPETLKIMTAAFDNARRCLPAKFRENDRARRKLALLVIRYFERGERNPVCLADSAVLEFLR*
Ga0132258_103480233	3300015371	Arabidopsis Rhizosphere	MPWSHNFERVYGPDTLKIMTTAFDNARKCLPAKVRENDRARRKLALLILRHIERGELDPESLADSAVLDFLR*
Ga0132258_109524372	3300015371	Arabidopsis Rhizosphere	MPSSHNFERVYGPDTLKIMTTAFDNAHKCLPAKYRKNDQARRKLALLILRHIERGEHDPEYLADSAVLDFLR*
Ga0132258_130811403	3300015371	Arabidopsis Rhizosphere	MVLSHNFDRVYGPDTLKIITAAFDNAHECLPAEFKKSERARRKLALLILRHIERGERDPSRLAETAVLDFLR*
Ga0182038_100018993	3300016445	Soil	MPSMHYIERVYDPATLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERDPIRLADMAVLDFLR
Ga0187786_103745381	3300017944	Tropical Peatland	MMVSSHNIERVYGPDTLKMMTAAFDCAHRCLPAKLRENDQARRKLALLIIRHMERGAHDPVSLADLAVLDFLR
Ga0187785_100424963	3300017947	Tropical Peatland	MVSSHNIERVYGPDTLKIMTAAFDNARQCLPAKLRENDHARRKLALLIIRHMERGAHDPVSLADLAVLDFMR
Ga0187776_103460791	3300017966	Tropical Peatland	MALSHNFERVYGPDTLKIITAAFDNAHECLPAEFKKSERARRKLALLILRHMEHGERDPSRLAETAVLDFLR
Ga0184608_103908191	3300018028	Groundwater Sediment	MLSSHNIERVYGPDTLKIMTTAFDNAHECLPAKFKENDRARRKLALLIIRHMERGERNPVSL
Ga0187787_100700531	3300018029	Tropical Peatland	MALSHNFERVYGPDTLKIITAAFDNAHECLPAEFKKSERARRKLALLILRHMEHGERDPSRLDFLR
Ga0187788_104483211	3300018032	Tropical Peatland	MMVSSHNIERVYGPDTLKMMTAAFDCAHRCLPAKLRENDQARRKLALLIIRHMERGAHDPVSLADLAVLD
Ga0184621_101509401	3300018054	Groundwater Sediment	MLSSHNIERVYGPDTLKIMTAAFDNAHDCLPAKFRENDHARRKLALLIIRHMERGERNPVSLANVAMLDFLR
Ga0184635_100260113	3300018072	Groundwater Sediment	MPSSHNFERVYGPDTLKIVTTAFDKAHECLPSEFQKNDHARRKLALLILRHIERGEHDPVRLADSAVLDFLR
Ga0184635_103229281	3300018072	Groundwater Sediment	MPSAHDIERVYGPDTLKIMATAFDNAHKCLPKKFRESDQARHKLALLVMRHIGRGERDPVCLADSAVLDFLR
Ga0184609_100950491	3300018076	Groundwater Sediment	MASSYNFERVYGPDSLKIMAAAFDNAHKSLPARFQENDRAKRRLALLILRHIERGEHDPVRLADSAVLDFFR
Ga0184625_103123691	3300018081	Groundwater Sediment	MPSSHNFERVYGPDALKIMTTAFDNAHKCLPAKFRENDQARRKLLLILRHIERGEHDPVCLADSAVLAFLR
Ga0173482_103153191	3300019361	Soil	MPSTHNSERVYDPDTLKIMTMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVL
Ga0193723_11032422	3300019879	Soil	MPSAHDIQRVYDPDTLKIMTMAFDNAHECLPKRFREIEQARHRLALLVMRHIGHGERDPVCLADSAVLDFLR
Ga0193730_10421542	3300020002	Soil	MTSSHNFERVYGPDSLKVMTTAFDYAHKSLPAKLQENDRAKRRLALLILRHIERGEHDPERLATSAVLDF
Ga0193719_102701541	3300021344	Soil	RSSQSHEFKQEGPMPSSHNFERVYGPDTLKIMTTAFDNAHKCLPAKFRKNDQARRKLALLILRHIERGEHDPECLADSAVLDFLR
Ga0126371_103223962	3300021560	Tropical Forest Soil	MALSHNFERVYDPDRLKIITAAFDNAYECLPAEFKKTDHARRKLALLILRHMEHGEHDPSRLAETAVRDFLR
Ga0126371_106329372	3300021560	Tropical Forest Soil	MPSMHYIERVYDPVTLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERDPIRLADMAVLDFLR
Ga0207665_106981942	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSHSFERVYGPDTLKIMTTAFDNAHKCLPAKLRKNDQARRKLALLILRHIERGEHDPECLADSAALDFLR
Ga0207703_124216131	3300026035	Switchgrass Rhizosphere	GRRCRAVLVTSVFKGEGQMPSTHNSERVYDPDTLKIMTMAFDNAHKCLPKKYRENDQARHRLALLVMRYIGRGERDPIRLAYSAVLDFLR
Ga0209647_10364102	3300026319	Grasslands Soil	MASFRNFERVYDPDSLRIMAVAFDSAHKSLPAKFQENDRARRKLALLILRHIERGEHDPVRLANSAVLDFLR
Ga0207983_10172741	3300027310	Soil	FDNAHDYLPAEFQKSNHAKRKLALLILRHIERGERDPDRLAEAAVLDFLR
Ga0207981_10840801	3300027560	Soil	HDFERAYGPDTLKIITAAFDNAHECLPAEFKKSEHARRKLALLILRHIERGEHDPGRLAETAVMDFLR
Ga0209073_102061581	3300027765	Agricultural Soil	AFDNAHECLPRNLKESEHARRKLALLIMRHMERGQRDPSSLATVAMLDLLR
Ga0307301_101069502	3300028719	Soil	MLSSHNIERVYGPDTLKIMTTAFDNAHECLPAKFKENDRARRKLALLIIRHMERGERNPVSLATVAVLDLLR
Ga0307282_101023033	3300028784	Soil	MRSNRRDITLSSHDIERVYGPDTLKIMTVAFDNAHRYLPAKFKENDNARRKLALLIIRHMERGERNPMSLANVAVLDFLR
Ga0307290_102467481	3300028791	Soil	MASSHNFERVYGPDSLKIMAAAFDNAHKSLPARFQENDRAKRRLALLILRHIERGEHDPVRLADSAVLDFFR
Ga0307299_100491282	3300028793	Soil	MASSHNFERVYGPDFLKVMTTAFDYAHESLPAKLQENDRAKRRLALLILRHIERGEHDPERLATSAVLDFFR
Ga0307284_103500791	3300028799	Soil	MRSNRRDITLSSHDIERVYGPDTLKIMTVAFDNAHRYLPAKFKENDNARRKLALLIIRHMERGERNP
Ga0307503_103079552	3300028802	Soil	MALVHNFERVYGPDTLKTITAAFDNAHEYLPAEFQKSNHAKRKLALLILRHIERGERDPDRLAEAAVLDFLR
Ga0307312_105522152	3300028828	Soil	PTILNYGPDFLKVMTTAFDYAHESLPAKLQENDRAKRRLALLILRHIERGEVDPERLATSAVLDFFR
Ga0307308_101159921	3300028884	Soil	MRSNRRDITLSSHDIERVYGPDTLKIMTVAFDNAHRYLPAKFKENDNARRKLALLIIRHMERGERNPMSLANV
Ga0307304_100307121	3300028885	Soil	MRSNRRDITLSSHDIERVYGPDTLKIMTVAFDNAHRYLPAKFKENDNARRKLALLIIRHMERG
Ga0307498_100419301	3300031170	Soil	MPSAHDIQRVYDPDTLKIMTMAFDSAHECLPKRLRESDQARHRLALLVMRHIAHGERDPVCLADSAVLDFFR
Ga0307498_101018792	3300031170	Soil	MASSHNFERVYGPDSLKIMAAAFDNAHKSLPTRFQENDRAKRRLALLILRHIERGEHDPVCLADSAVLDFLR
Ga0307498_103924961	3300031170	Soil	MASFHNFERSYGPDSLKIMTVAFDNAHKSLPAKFQKNDRARRKLALLIFRHIERGEHDPVRLANSAVLDFLR
Ga0170824_1273502531	3300031231	Forest Soil	LKIITAAFDNAHECLPAKYQKNDRARRRLALIILRHIDRGEHDPVRLADSAVLDFLQ
Ga0170820_1119220412	3300031446	Forest Soil	MPSSHNFERVYGPDTLKIMTTAFDNAHKCLPANFRKNDQARRKLALLILRHIERGELDPECPADSAVLDFLR
Ga0170820_117164851	3300031446	Forest Soil	YSPDSLKIMTTAFDYAHKSLPAKFQENDRARHKLALLILRHVERGEHDPERLAASAVLDFLR
Ga0170820_155136351	3300031446	Forest Soil	MASFYDFERVYGPDTLKIITAAFDNAHECLPAKYQKNDRARRRLALIILRHIDRGEHDPVRLADSAVLDFLQ
Ga0307505_106831941	3300031455	Soil	PSSHNFERVYGPDTLKIMTTAFDNAHKCLPANFRKNDQARRKLALLILRHIERGEHDPECLADSAVLDFLR
Ga0170819_176178372	3300031469	Forest Soil	MALVHNFERVYGPDTLKTITAAFDNAHEYLPAEFQKSNHAKRKLALLILRHIERGERDP
Ga0310813_100063105	3300031716	Soil	MLSSHNIERVYSPDTLKIMAAAFDNAHECLPAKFKENDRARHKLALLIMRHMERGEHDPTSLATLAVLDLLR
Ga0307469_100222583	3300031720	Hardwood Forest Soil	MPSSHNFERVYGPDTLKIMTTAFDNAHKCLPAKLRRNDQARRKLALLILRHIESGEHDPECLADAAVLDFLR
Ga0318500_107431861	3300031724	Soil	MPSMHYIERVYDPVTLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERYPI
Ga0318537_102034001	3300031763	Soil	HYIERVYDPVTLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERYPIRLADMAVLDFLR
Ga0318566_106368281	3300031779	Soil	MPSMHYIERVYDPVTLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERDPIRLA
Ga0306919_1000129210	3300031879	Soil	MPSMHYIERVYDPVTLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERYPIRLADMAVLDFLR
Ga0318520_107801271	3300031897	Soil	MPSMHYIERVYDPVTLKIMATAFDNAINCLPKKFRESERARHKLALIVMRHIGRGERYPIRLADM
Ga0307471_1004406702	3300032180	Hardwood Forest Soil	MPSSHNFERVYGPDTLKIMTTAFDNAHKCLPAKFRKNDQARRKLALLILRHIERGEHDPECLADSAVLDFLR
Ga0310812_100709932	3300032421	Soil	MHPSHNIERVYSPDTLKIMAAAFDNAHECLPAKFKENDRARHKLALLIMRHMERGEHDPTSLATLAVLDLLR
Ga0335084_104297713	3300033004	Soil	MASSHNVERVYGPDSLRIMAAAFDNAHKSLPAKFRENERAKRKLALLILRHIERGEHDPGRLACSAVIDFLR
Ga0326726_105892362	3300033433	Peat Soil	MASSHNVERVYGPDSLRIMAAAFDNAHKSLPAKFRENDRAKRKLALLILRHIERGEHDPGRLACSAVIDFLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051322

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences