NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F051284

Metagenome / Metatranscriptome Family F051284

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F051284
Family Type Metagenome / Metatranscriptome
Number of Sequences 144
Average Sequence Length 45 residues
Representative Sequence MPLEITQRETNGIYLLALKGRLVLGEESSGLLTVIDNLLASGAT
Number of Associated Samples 121
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 95.83 %
% of genes near scaffold ends (potentially truncated) 96.53 %
% of genes from short scaffolds (< 2000 bps) 91.67 %
Associated GOLD sequencing projects 114
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (87.500 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(27.778 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.556 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.83%    β-sheet: 19.44%    Coil/Unstructured: 59.72%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF07228SpoIIE 6.25
PF04264YceI 2.08
PF14534DUF4440 2.08
PF02897Peptidase_S9_N 2.08
PF00144Beta-lactamase 1.39
PF14329DUF4386 1.39
PF01850PIN 1.39
PF01566Nramp 1.39
PF02954HTH_8 1.39
PF01738DLH 1.39
PF00589Phage_integrase 0.69
PF13473Cupredoxin_1 0.69
PF13581HATPase_c_2 0.69
PF01904DUF72 0.69
PF02517Rce1-like 0.69
PF01066CDP-OH_P_transf 0.69
PF09723Zn-ribbon_8 0.69
PF12762DDE_Tnp_IS1595 0.69
PF00691OmpA 0.69
PF07804HipA_C 0.69
PF02687FtsX 0.69
PF00933Glyco_hydro_3 0.69
PF13858DUF4199 0.69
PF00817IMS 0.69
PF02661Fic 0.69
PF07238PilZ 0.69
PF02371Transposase_20 0.69
PF07722Peptidase_C26 0.69
PF01522Polysacc_deac_1 0.69
PF10027DUF2269 0.69
PF16036Chalcone_3 0.69
PF00199Catalase 0.69
PF05016ParE_toxin 0.69
PF04471Mrr_cat 0.69
PF00582Usp 0.69
PF04255DUF433 0.69
PF00719Pyrophosphatase 0.69
PF00106adh_short 0.69
PF14520HHH_5 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 2.08
COG1505Prolyl endopeptidase PreP, S9A serine peptidase familyAmino acid transport and metabolism [E] 2.08
COG1770Protease IIAmino acid transport and metabolism [E] 2.08
COG2367Beta-lactamase class ADefense mechanisms [V] 1.39
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 1.39
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 1.39
COG1914Mn2+ or Fe2+ transporter, NRAMP familyInorganic ion transport and metabolism [P] 1.39
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 0.69
COG0221Inorganic pyrophosphataseEnergy production and conversion [C] 0.69
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.69
COG3550Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin moduleSignal transduction mechanisms [T] 0.69
COG3547TransposaseMobilome: prophages, transposons [X] 0.69
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.69
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 0.69
COG1472Periplasmic beta-glucosidase and related glycosidasesCarbohydrate transport and metabolism [G] 0.69
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.69
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 0.69
COG0753CatalaseInorganic ion transport and metabolism [P] 0.69
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.69
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 0.69
COG0389Nucleotidyltransferase/DNA polymerase DinP involved in DNA repairReplication, recombination and repair [L] 0.69


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.50 %
UnclassifiedrootN/A12.50 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2040502001|FACENC_GAMC6GA01BVYHPAll Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
2170459023|GZGNO2B02I2G20All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300002917|JGI25616J43925_10026412All Organisms → cellular organisms → Bacteria2574Open in IMG/M
3300004080|Ga0062385_11238242All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae512Open in IMG/M
3300005171|Ga0066677_10002461All Organisms → cellular organisms → Bacteria6953Open in IMG/M
3300005178|Ga0066688_10022906All Organisms → cellular organisms → Bacteria3344Open in IMG/M
3300005467|Ga0070706_101286026All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166671Open in IMG/M
3300005471|Ga0070698_100951798All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium805Open in IMG/M
3300005559|Ga0066700_10372162All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300005575|Ga0066702_10913414All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300005591|Ga0070761_10158791All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300006034|Ga0066656_10909974All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300006176|Ga0070765_101605387All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae611Open in IMG/M
3300007258|Ga0099793_10100074All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1340Open in IMG/M
3300007258|Ga0099793_10564146Not Available569Open in IMG/M
3300007265|Ga0099794_10679070All Organisms → cellular organisms → Bacteria → Acidobacteria548Open in IMG/M
3300009038|Ga0099829_10385595All Organisms → cellular organisms → Bacteria → Acidobacteria1157Open in IMG/M
3300009038|Ga0099829_10495557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1014Open in IMG/M
3300009089|Ga0099828_10403916Not Available1232Open in IMG/M
3300010303|Ga0134082_10057855All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1494Open in IMG/M
3300010322|Ga0134084_10354060All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300010359|Ga0126376_12664441All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300010360|Ga0126372_11323087Not Available750Open in IMG/M
3300010360|Ga0126372_12059500All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300010366|Ga0126379_11564083All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis765Open in IMG/M
3300010398|Ga0126383_10114558All Organisms → cellular organisms → Bacteria → Acidobacteria2442Open in IMG/M
3300011120|Ga0150983_10863732All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium669Open in IMG/M
3300012189|Ga0137388_10319025All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1428Open in IMG/M
3300012205|Ga0137362_11656872All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300012207|Ga0137381_10746931All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium849Open in IMG/M
3300012210|Ga0137378_10277250All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1560Open in IMG/M
3300012210|Ga0137378_11086948All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium714Open in IMG/M
3300012211|Ga0137377_11691818All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300012351|Ga0137386_10393852All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium997Open in IMG/M
3300012357|Ga0137384_10915509All Organisms → cellular organisms → Bacteria → Acidobacteria706Open in IMG/M
3300012359|Ga0137385_11127602All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium645Open in IMG/M
3300012363|Ga0137390_10532706All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1146Open in IMG/M
3300012363|Ga0137390_10953546All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300012918|Ga0137396_10630668All Organisms → cellular organisms → Bacteria → Acidobacteria792Open in IMG/M
3300012925|Ga0137419_10218601Not Available1420Open in IMG/M
3300012925|Ga0137419_10919906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria721Open in IMG/M
3300012927|Ga0137416_10882537All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300012929|Ga0137404_11414184All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300012929|Ga0137404_11535027Not Available617Open in IMG/M
3300012930|Ga0137407_10898428All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium838Open in IMG/M
3300012944|Ga0137410_10917701All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium741Open in IMG/M
3300015052|Ga0137411_1078552All Organisms → cellular organisms → Bacteria1445Open in IMG/M
3300015371|Ga0132258_11786371All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1550Open in IMG/M
3300016270|Ga0182036_10164746All Organisms → cellular organisms → Bacteria1592Open in IMG/M
3300016270|Ga0182036_10902998All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium724Open in IMG/M
3300016294|Ga0182041_10795260All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300016357|Ga0182032_10066407All Organisms → cellular organisms → Bacteria2414Open in IMG/M
3300016404|Ga0182037_10726427Not Available852Open in IMG/M
3300016422|Ga0182039_12084416Not Available522Open in IMG/M
3300017823|Ga0187818_10053327All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB601738Open in IMG/M
3300017955|Ga0187817_11047731All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300017974|Ga0187777_10640064All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300017975|Ga0187782_11217788Not Available589Open in IMG/M
3300017995|Ga0187816_10287996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium719Open in IMG/M
3300018058|Ga0187766_10047957All Organisms → cellular organisms → Bacteria2505Open in IMG/M
3300018058|Ga0187766_10429715All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300018085|Ga0187772_11458795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300018086|Ga0187769_10256069Not Available1303Open in IMG/M
3300018088|Ga0187771_11877803All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300018433|Ga0066667_10003321All Organisms → cellular organisms → Bacteria6618Open in IMG/M
3300019278|Ga0187800_1062074All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300020006|Ga0193735_1025478All Organisms → cellular organisms → Bacteria → Acidobacteria1819Open in IMG/M
3300020015|Ga0193734_1087908All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300020579|Ga0210407_10565283All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300020579|Ga0210407_10754948All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300020579|Ga0210407_10805844All Organisms → cellular organisms → Bacteria → Acidobacteria724Open in IMG/M
3300020579|Ga0210407_10961946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300020579|Ga0210407_11212220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300020579|Ga0210407_11371923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300020580|Ga0210403_10238825All Organisms → cellular organisms → Bacteria1491Open in IMG/M
3300020581|Ga0210399_10386570All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1167Open in IMG/M
3300020583|Ga0210401_10454099All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1144Open in IMG/M
3300020583|Ga0210401_11476159All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300021168|Ga0210406_10984194All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300021178|Ga0210408_11394139All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300021180|Ga0210396_10713069All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300021406|Ga0210386_10700385All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae873Open in IMG/M
3300021407|Ga0210383_10735094All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium847Open in IMG/M
3300021420|Ga0210394_11635718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300021432|Ga0210384_10341295All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300021474|Ga0210390_10220161All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1606Open in IMG/M
3300021474|Ga0210390_10657958All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300021475|Ga0210392_10771734All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300021478|Ga0210402_11138509All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300021479|Ga0210410_10395445All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1238Open in IMG/M
3300021479|Ga0210410_10753098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium857Open in IMG/M
3300021479|Ga0210410_10928523All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium758Open in IMG/M
3300021559|Ga0210409_10272072All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1531Open in IMG/M
3300021559|Ga0210409_10420232All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1195Open in IMG/M
3300024222|Ga0247691_1005505All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2191Open in IMG/M
3300024330|Ga0137417_1434642All Organisms → cellular organisms → Bacteria → Acidobacteria2194Open in IMG/M
3300025910|Ga0207684_11009463All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium696Open in IMG/M
3300025916|Ga0207663_10395020Not Available1056Open in IMG/M
3300026304|Ga0209240_1124675All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium872Open in IMG/M
3300026314|Ga0209268_1175874All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300026315|Ga0209686_1003878All Organisms → cellular organisms → Bacteria6801Open in IMG/M
3300026317|Ga0209154_1135548All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300026331|Ga0209267_1036239All Organisms → cellular organisms → Bacteria2318Open in IMG/M
3300026527|Ga0209059_1339843All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300026538|Ga0209056_10120143All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2089Open in IMG/M
3300026547|Ga0209156_10354347All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300026548|Ga0209161_10169161All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1246Open in IMG/M
3300026548|Ga0209161_10365791All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300026551|Ga0209648_10242716All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300026990|Ga0207824_1008760All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300027024|Ga0207819_1021810All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300027049|Ga0207806_1022958All Organisms → cellular organisms → Bacteria → Acidobacteria723Open in IMG/M
3300027070|Ga0208365_1051174All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300027174|Ga0207948_1050059All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300027590|Ga0209116_1131121All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300027853|Ga0209274_10096419All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1454Open in IMG/M
3300028047|Ga0209526_10828790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300031057|Ga0170834_111554445All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300031231|Ga0170824_122120397All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300031546|Ga0318538_10240632All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300031573|Ga0310915_10546130Not Available822Open in IMG/M
3300031718|Ga0307474_10241641All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1381Open in IMG/M
3300031720|Ga0307469_11860116All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300031753|Ga0307477_10824876All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300031754|Ga0307475_10908151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium695Open in IMG/M
3300031820|Ga0307473_10487022Not Available829Open in IMG/M
3300031823|Ga0307478_11169800All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-01641Open in IMG/M
3300031833|Ga0310917_10148505All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300031897|Ga0318520_11048799All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300031945|Ga0310913_10817806Not Available657Open in IMG/M
3300031947|Ga0310909_10823483Not Available766Open in IMG/M
3300031962|Ga0307479_12046827All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300032035|Ga0310911_10416685Not Available777Open in IMG/M
3300032174|Ga0307470_10253923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1163Open in IMG/M
3300032180|Ga0307471_102687095All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium631Open in IMG/M
3300032782|Ga0335082_10804166All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium802Open in IMG/M
3300032782|Ga0335082_11557864All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300032954|Ga0335083_10604406Not Available903Open in IMG/M
3300032955|Ga0335076_10383891All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1289Open in IMG/M
3300033158|Ga0335077_11143336All Organisms → cellular organisms → Bacteria → Acidobacteria766Open in IMG/M
3300033158|Ga0335077_11615720Not Available616Open in IMG/M
3300033289|Ga0310914_10826091All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales825Open in IMG/M
3300033289|Ga0310914_11812721Not Available514Open in IMG/M
3300033983|Ga0371488_0396474All Organisms → cellular organisms → Bacteria640Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil25.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.33%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.25%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.17%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.17%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.47%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.47%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.78%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.08%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.39%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.39%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.39%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.39%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.69%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.69%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.69%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.69%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2040502001Soil microbial communities from sample at FACE Site 2 North Carolina CO2+EnvironmentalOpen in IMG/M
2170459023Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)EnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020015Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024222Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026990Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)EnvironmentalOpen in IMG/M
3300027024Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)EnvironmentalOpen in IMG/M
3300027049Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)EnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027174Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)EnvironmentalOpen in IMG/M
3300027590Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033983Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACENCE_8770402040502001SoilMPLEITQREMNGIYLLALNGRLVLGQESGGLLTVIDNLLASGGTRIVINLEHV
FA3_114095602170459023Grass SoilMPLEITQREMNGIYLLALNGRLVLGQESGGLLTVIDNLLASG
JGI25616J43925_1002641213300002917Grasslands SoilVPLEITQREMNGVCLLALKGRLALGEESTGLRTMIDNLLASGATRIVINL
Ga0062385_1123824213300004080Bog Forest SoilMPLEVTQREMNGIYVLALKGRLVLGQESNGFRTVIDNLLASG
Ga0066677_1000246153300005171SoilMSLEITQREMNGIYFLALKGRLVLGQQSSGLLTMTDNLFASGATRIVINLEQVKLC*
Ga0066688_1002290623300005178SoilMSLEITQREMNGIYLLALKGRLVLGQQSSGLLTMTDNLFASGATRIVINLEQVKLC*
Ga0070706_10128602613300005467Corn, Switchgrass And Miscanthus RhizosphereMPLEVTQREMNGICLLALKGRLVLGQESNGLHTVIDDLLASGATRIVINL
Ga0070698_10095179823300005471Corn, Switchgrass And Miscanthus RhizosphereMPLEVTQREMNGICLLALKGRLVLGQESNGLHTVIDDLLASGATRIVI
Ga0066700_1037216223300005559SoilMPLEITQREMNGIYLLALKGRLVLGEESSGLLAVIDNL
Ga0066702_1091341423300005575SoilMPLEITQREMNGIYLLALKGRLVLGEESSGLLAVIDNLLASGATRVV
Ga0070761_1015879133300005591SoilMSLEITQREMNGIYLLALKGRLVLGHESSGLRTMID
Ga0066656_1090997413300006034SoilEITQREMNGIYLLALKGRLVLGQQSSGLLTMTDNLFASGATRIVINLEQVKLC*
Ga0070765_10160538723300006176SoilMPLEITQREIKGIYLLALKGRLVLGEESSGLRTMIDNLLASGATRIV
Ga0099793_1010007413300007258Vadose Zone SoilMPLEITQREMNGIYLLALKGRLVLGQESGGLLAMIDNLLASGATRIVINLEQVNY
Ga0099793_1056414623300007258Vadose Zone SoilVPLELTQREMSGIHVLALKGRLVLGPESVGLRTTVDDLLSSGVTRILIDLEHVS
Ga0099794_1067907023300007265Vadose Zone SoilMPLEITQRDMNGIYLLALKGRLVLGQESSGLLTVID
Ga0099829_1038559513300009038Vadose Zone SoilMPLEIAQREMNGIYLLALKGRLVLGEESSGLLTVIDNLLASGVTRIVVNLEHVN
Ga0099829_1049555713300009038Vadose Zone SoilMPLEITQRETNEIYLLALKGRLVLGEESSGLLTMIDNLL
Ga0099828_1040391623300009089Vadose Zone SoilMPLEITQRETNGIYLLALKGRLVLGEESSGLLTVIDNLLASGAT
Ga0134082_1005785513300010303Grasslands SoilMNGIYLLALKGRLVLGQESNGLRAMIDNLLASGGTRIVINLEHVNYVDS
Ga0134084_1035406023300010322Grasslands SoilMPLEITQREMNGIYLLALKGRLVLGEESSGLLAVIDNLL
Ga0126376_1266444113300010359Tropical Forest SoilVPLEITQRDANGIYILALRGRLVLGQESSGLRTTVNNLLSSGVTRLVINLEH
Ga0126372_1132308723300010360Tropical Forest SoilMPLEITQREMNGIYLLALNGRLVLGQESGGLLTMIDN
Ga0126372_1205950023300010360Tropical Forest SoilLEITQRETDGIHLLALKGRLVLGDESNGFRTTVENLLSSGATRIVVNFEH
Ga0126379_1156408313300010366Tropical Forest SoilVSLEITQREEDGIYRLALKGRLVLGDENIGFRTIVENLLAAGATRIVVNLEHVNY
Ga0126383_1011455863300010398Tropical Forest SoilVALEITQREVDGIYRLALKGRLVLGDENIGFRTAIDDLLG
Ga0150983_1086373213300011120Forest SoilMPLEITQREMNGIYLLALNGRLALGQESSGLLTMVDNLLASGATRIVINLE
Ga0137388_1031902513300012189Vadose Zone SoilMPLEITQRETKGIYLLALKGRLVLGEESSGLLTVIDNLLASGATRIVINLEQ
Ga0137362_1165687223300012205Vadose Zone SoilMPLEITQRETNGIYLLALKGRLVLGEESSGLLTMIDNLLASGATRMVINLE
Ga0137381_1074693113300012207Vadose Zone SoilMPLEITQREMNGIYLLALKGRLVLGQESSGLLTMTDNLLASAATRIV
Ga0137378_1027725033300012210Vadose Zone SoilMPLEITQRETNGIYLLALKGRLVLGEESSGLLTTIDNP
Ga0137378_1108694823300012210Vadose Zone SoilMPLEITQRETNGIYLLALKGRLVLGEESMGLLTVIDNLLASGATRMVV
Ga0137377_1169181813300012211Vadose Zone SoilMPLEITQRETNGIYLLALKGRLVLGEESSGLLTVIDNL
Ga0137386_1039385233300012351Vadose Zone SoilMNATFKVWTVALEITERELEGVYVLVLRGRLVLGEESSRFRTTVETLLSKGAA
Ga0137384_1091550923300012357Vadose Zone SoilMPLEITQRETNGIYLLALKGRLVLGEESSGLLTVIDNLLASG
Ga0137385_1112760213300012359Vadose Zone SoilVPLEITQREMNGIYLLALRGRLVLGEESSGFRTTVDNLLS
Ga0137390_1053270623300012363Vadose Zone SoilMPLEITQRETNGIYLLALKGRLVLGEESSGLLTTID
Ga0137390_1095354623300012363Vadose Zone SoilMPLEITQRDMNGIYLLALKGRLVLGQESSGLLTMI
Ga0137396_1063066823300012918Vadose Zone SoilMPLEITQREMNGIYLLALKGRLALGQESSGLLTMIDNLLASGA
Ga0137419_1021860123300012925Vadose Zone SoilVPLEITQRETNGVYVLTLSGRLVLGPESIGLRTTIDNLLSSGGAKIVV
Ga0137419_1091990613300012925Vadose Zone SoilMPLEITQRELNGIYLLALKGRLVLGQESSGLLTMIDNLLASGATRM
Ga0137416_1088253723300012927Vadose Zone SoilMPLEITQREMNGIYLLALKGRLVLGDESSGLLTMIDNLLASGATRMV
Ga0137404_1141418413300012929Vadose Zone SoilMPLEITQREMNGIYVLALKGRLVLGQESSGLLTMTDNLLASGATRIVINLEQVNY
Ga0137404_1153502713300012929Vadose Zone SoilLAQEEGCPVPLEITQRETNGIYVLTLSGRLVLGPESIGLRTTIDNLLSSGGAKIVVGLEHVNSVDSAGI
Ga0137407_1089842823300012930Vadose Zone SoilMPLEITQRETNGIYVLALKGRLVLGDESIGLLAMLDNLLASGAT
Ga0137410_1091770133300012944Vadose Zone SoilMPLEITQREMNGIYLLALKGRLVLGEESSGLRTTIDNLLAS
Ga0137411_107855233300015052Vadose Zone SoilMPLEITQREMNGIYLLALKGRLVLGQESSGLLAMIDNLVASGAT
Ga0132258_1178637133300015371Arabidopsis RhizosphereVPLEITQREINGVYLLALRGRLVLGEKSSGFRETVENLLSTRATKIVVNLERVTDVDSAG
Ga0182036_1016474613300016270SoilVALEITQREINGIYVLALTGRLVLGEESNGLRTTV
Ga0182036_1090299823300016270SoilVPLEITQREMNGIYLLTLKGRLVLGEESNGFRTTIDSLLSTGATRIVV
Ga0182041_1079526023300016294SoilVALDITQREVNGIYILALEGRLVLGEESNGLRTTVE
Ga0182032_1006640743300016357SoilVALEITQREINGIYVLALTGRLVLGEESNGLRTTVE
Ga0182037_1072642723300016404SoilMPLEITQREMNGIYLLALNGRLVLGQESSGLLTVIDNLLASGATRVVINLEHV
Ga0182039_1208441623300016422SoilVALEITQREVSGIYVLALEGRLVLGEESNGLRTTVENLLSAGA
Ga0187818_1005332723300017823Freshwater SedimentMPLEITQREVNGIYLLALKGRLVLGQESIGLLTMMDNLL
Ga0187817_1104773113300017955Freshwater SedimentMPLEITQREVNGIYLLALKGRLVLGQESSGLLTMMD
Ga0187777_1064006413300017974Tropical PeatlandVSLEITQREINGIYLLALRGRLVLGEESNGLRTTVDNLLAAGATRVV
Ga0187782_1121778823300017975Tropical PeatlandMRLEIQQKETQGIQVLDLTGRLVLGEEDLALRQRL
Ga0187816_1028799613300017995Freshwater SedimentMPLEITQREVNGIYLLALKGRLVLGQESSGLLTMM
Ga0187766_1004795753300018058Tropical PeatlandMALEITQQESNGICVLALKGRLVLGEESTGFRATVEKLLSSGTK
Ga0187766_1042971513300018058Tropical PeatlandMPLEITQREMNGIYLLALKGRLALGQESTGLRTVIDGLLASGATR
Ga0187772_1145879523300018085Tropical PeatlandVPLEIIQRETNGIYLLGLNGRLVLGEESSGVRATVDNLLTSGA
Ga0187769_1025606933300018086Tropical PeatlandVPLEITQRETNGVYLLALRGRLVLGDESSGFRTTIDSLLATGATRIVV
Ga0187771_1187780323300018088Tropical PeatlandMALEITQQEANGICVLALKGRLVLGEESSGFRATVEKLLSSGT
Ga0066667_1000332133300018433Grasslands SoilMSLEITQREMNGIYLLALKGRLVLGQQSSGLLTMTDNLFASGATRIVINLEQVKLC
Ga0187800_106207423300019278PeatlandVSLEITQRETNGIYLLGLKGRLVLGDESTGVRATVETLLSSGATKII
Ga0193735_102547813300020006SoilMPLEITQREMNGIYLLALKGRLVLGQESSGLLTMTDNLLASGATRIV
Ga0193734_108790823300020015SoilMPLEITQREMNGIYLLALKGRLVLGQESSGLLTMTDNL
Ga0210407_1056528333300020579SoilMSLEITQRETNGIYLLALKGRLVLGEESRGLLTVIDRLLE
Ga0210407_1075494823300020579SoilMPLEITQRETNGIYLLALKGRLVLGEESSGLLTTIDHLLASGATRMVIN
Ga0210407_1080584423300020579SoilMPLEITQREMNGIYLLALKGRLVLGQESSGLRAMIDNLLA
Ga0210407_1096194613300020579SoilMPLEITQREMNGIYLLALNGRLALGQESSGLLTMVDKLLASSATRIVINLEH
Ga0210407_1121222013300020579SoilMPLEITQREMNGIYLLALKGRLVLGPESSGLLTVVDNLL
Ga0210407_1137192323300020579SoilMPLEITQRETNGIYLLALKGRLVLGQESSGLLSMI
Ga0210403_1023882523300020580SoilMPLEVTQREMNGTYLLALKGRLVLGQESNGLHTMIDNLLASGATRIVINLDQVN
Ga0210399_1038657033300020581SoilMPLEITQREMNGIYVLALKGRLVLGQESSGLRAMIDNLLAS
Ga0210401_1045409923300020583SoilMPLEVTQREMNGIYLLALNGRLALGQESSGLLTMID
Ga0210401_1147615913300020583SoilMPLEITQREINGIYLLALKGRLALGQESSGLRAMIDNLLASGVTRIVINLEHVNYV
Ga0210406_1098419413300021168SoilMPLEITQREMNGIYLLALNGRLALGQESSGLLTMVDKLLA
Ga0210408_1139413913300021178SoilMPLEITQREMNGIYLLALNGRLALGQESSGLLTMIDNLLASG
Ga0210396_1071306913300021180SoilVPLEITQRETDGIYLLTLKGRLVLGLENNGLRTVIDNLLVSGATKIVV
Ga0210386_1070038523300021406SoilVSLEITQRETKGVYLLSLSGRLVLGDESIGLRTMVDNLLTSGATRVVINLEHVHY
Ga0210383_1073509413300021407SoilMPLEITQREMNGVYLLALKGRLVLGQESRGLLTMSDNLVASGAARIVINLEQVNYVD
Ga0210394_1163571813300021420SoilVPLEITQRETDGIYLLTLKGRLVLGLENNGLRTVIDNLLVSGATKIVVN
Ga0210384_1034129513300021432SoilMPLEIVQREMNGIYLLALDGRLVLGKESTGLRTMIENLLETGATRIVI
Ga0210390_1022016143300021474SoilMPLEITQREMNGIYLLALKGRLVLGQESRGLLTMFDNLVASGAARIVINLEQ
Ga0210390_1065795813300021474SoilMPLEITQREMNGVYLLALKGRLVLGQESRGLLTMSDNLVASGAARIVINLEQV
Ga0210392_1077173423300021475SoilVPLEITQRETNGIYVLTLSGRLVLGPESIGLRTTIDNLLSSGAEKMVVG
Ga0210402_1113850923300021478SoilMPLEITQREMNGIYLLALNGRLALGQESSGLLTMIDNLL
Ga0210410_1039544523300021479SoilVPLEITQREANGIYLLTLKGRLVLGLENNGLRTMVDNLLVLGATKIVVNLERV
Ga0210410_1075309823300021479SoilMPLEITQREVNGIYLLALKGRLALGQESSGLRTMIDN
Ga0210410_1092852313300021479SoilVALEITQRETDGLYLLALRGRLALGEESAGFRSAIDNLL
Ga0210409_1027207223300021559SoilMPLEVTQREMNGIYLLALKGRLVLGQESNGLHTVVDNLLAS
Ga0210409_1042023223300021559SoilVPLEITQRETDGIYLLTLKGRLVLGLENNGLRTVIDNLLVSGATKIVVNLEHVNSVD
Ga0247691_100550513300024222SoilVPLEITQRETNGIYILTLGGRLVLGPESIGLRTTVDNLLSSGAERIVVG
Ga0137417_143464243300024330Vadose Zone SoilMPLEITQRETNGIYLLALKGRLVLGEESSGLLTMIDNLLHPRYTDGH
Ga0207684_1100946313300025910Corn, Switchgrass And Miscanthus RhizosphereMPLEVTQREMNGICLLALKGRLVLGQESNGLHTVIDDLLASGATRIVINLEQV
Ga0207663_1039502013300025916Corn, Switchgrass And Miscanthus RhizosphereVPLEITQREINGIYLLALRGRLVLGDESRGFRETVENLLST
Ga0209240_112467523300026304Grasslands SoilVPLEITQREMNGVCLLALKGRLALGEESTGLRTMIDNLLA
Ga0209268_117587423300026314SoilMPLEITQREMNGIYLLALKGRLVLGQENSGLLTMTDN
Ga0209686_100387833300026315SoilMSLEITQREMNGIYFLALKGRLVLGQQSSGLLTMTDNLFASGATRIVINLEQVKLC
Ga0209154_113554823300026317SoilMPLEITQREMNGIYLLALKGRLVLGEESSGLLAVIDNLLA
Ga0209267_103623933300026331SoilITQREMNGIYLLALKGRLVLGQQSSGLLTMTDNLFASGATRIVINLEQVKLC
Ga0209059_133984313300026527SoilMPLEITQREMNGIYLLALKGRLVLGEESSGLLAVI
Ga0209056_1012014333300026538SoilMPLEITQREMNGIYLLALKGRLVLGEESSGLLAVIDNLLASGATRVVINLEQ
Ga0209156_1035434723300026547SoilMPLEITQRETNGIYLLALKGRLVLGEESSGLLTVIDNLLASGATRIVVNLE
Ga0209161_1016916113300026548SoilMPLEITQREMKGIYLLALKGRLVLGEESSGLLTTIDSLLA
Ga0209161_1036579113300026548SoilMPLEITQREMNGIYLLALKGRLVLGQESNGLRVMIDNLL
Ga0209648_1024271613300026551Grasslands SoilMPLEITQREMKGIYLLALNGRLALGQESSGLLTMVDNLLASGATRIVINLEHVN
Ga0207824_100876023300026990Tropical Forest SoilVALEITQREINGIYVLALTGRLVLGEESNGLRTTVEKLLSVSATKIV
Ga0207819_102181013300027024Tropical Forest SoilVALEITQREINGIYVLALTGRLVLGEESNGLRTTVEKLLSVSA
Ga0207806_102295823300027049Tropical Forest SoilMPLELTQREMNGIYLLALSGRLVLGQESSGLRTTVDNLLSSGATRIVIN
Ga0208365_105117423300027070Forest SoilMPLEITQREMNGIYLLALNGRLALGQESSGLLTMVDNLLASGATRIVIN
Ga0207948_105005913300027174Forest SoilMPLEITQREMNGIYLLALKGRLVLGQESSGVLTMVDN
Ga0209116_113112123300027590Forest SoilMSLEITQREMNGIYLLALKGRLVLGHESSGLRTMIDKLLACGV
Ga0209274_1009641913300027853SoilMSLEITQREMNGIYLLALKGRLVLGHESSGLRTMIDKLLAS
Ga0209526_1082879023300028047Forest SoilVPLEITQRETNGICLLTLKGRLVLGEESNGLRTTIDNLLS
Ga0170834_11155444523300031057Forest SoilVSLEITQREINGIYLLALQGRLVLGEESNGFRATVENLLSTGATKL
Ga0170824_12212039713300031231Forest SoilMPLEITQREMNGVYLLALKGRLVLGQESRGLLTMFDNLVASGAARIVINLEQVNY
Ga0318538_1024063223300031546SoilVALEITQREVNGIYVLALEGRLVLGEESNGLRTTVENLLSAGATK
Ga0310915_1054613023300031573SoilVALEITQREVNGIYVLALEGRLVLGEESNGLRTTVENLLSAGATKI
Ga0307474_1024164113300031718Hardwood Forest SoilMPLEITQREMNGIYLLALKGRLVLGQESRGLLTMFD
Ga0307469_1186011613300031720Hardwood Forest SoilMPLEITQREMNGIYLLALNGRLVLGQESGGLLTVIDNLLASGGTRIVI
Ga0307477_1082487623300031753Hardwood Forest SoilMPLEVTQREMNGIYLLALKGRLVLGEESNGLRTVIDNLLASGATRIVV
Ga0307475_1090815113300031754Hardwood Forest SoilMPLEITQREMNGIYLLALNGRLALGQESSGLLTTVDNLLASG
Ga0307473_1048702213300031820Hardwood Forest SoilMPLEITQREMNGIYLLALNGRLVLGQESSGLLTVIDNLLASGGNR
Ga0307478_1116980023300031823Hardwood Forest SoilMPLEITQREMNGIYLLALNGRLVLGQESSGLLTMIDNLLAS
Ga0310917_1014850533300031833SoilVALEITQREINGIYVLALTGRLVLGEESNGLRTTVEKLLSGSATK
Ga0318520_1104879913300031897SoilVPLEITQREMNGIYLLTLKGRLVLGEESNGFRTTIDSLLSTGATRIVVN
Ga0310913_1081780613300031945SoilMPLEITQREMNGIYLLALNGRLVLGQESSGLLTVI
Ga0310909_1082348313300031947SoilVALEITQREVSGIYVLALEGRLVLGEESNGLRTTVENLLSAGATKIVV
Ga0307479_1204682713300031962Hardwood Forest SoilMPLEVTQREMNGIYLLALKGRLVLGQESNGLHTVVDNLLASGATRIVINLE
Ga0310911_1041668513300032035SoilVALEITQREVNGIYVLALEGRLVLGEESNGLRTTVENLLSAGAT
Ga0307470_1025392313300032174Hardwood Forest SoilMPLEITQREMNGIYLLALNGRLVLGQESSGLLTMIDNLLASGATRIVINL
Ga0307471_10268709523300032180Hardwood Forest SoilMPLEITQREMNGIHLLALKGRLVLGQESSGLLTTIDNLLASGGIRIVINLEQVNY
Ga0335082_1080416613300032782SoilVPLEITQREVNGIYLLALRGRLVLGAESDGLRATIESLLASGSTRIVVNLEH
Ga0335082_1155786413300032782SoilVSLEITQREMNGIYLLTLKGRLVLGLESNGLRTAIDDLL
Ga0335083_1060440623300032954SoilMSMEITQREHEGVYLLALKGRLALGQESDGLRAMVDK
Ga0335076_1038389123300032955SoilVSLEITQRETNGIYLLALSGRLALGDESAGFRSTIDNLLAAGATRI
Ga0335077_1114333623300033158SoilMPLEITQREMNGIYVLALNGRLVLGQESSGLLAVVDNLLGSGSAR
Ga0335077_1161572013300033158SoilVALEITQRETDGLYVLALSGRLALGDESAGFRSTIDNLLAAGATRIVVN
Ga0310914_1082609113300033289SoilVPLEITQREVNGIYVLALRGRLVLGEESNGLRTTID
Ga0310914_1181272113300033289SoilVALEITQREVNGIYVLALEGRLVLGEESNGLRTTVE
Ga0371488_0396474_3_1853300033983Peat SoilMPLEITQHETNGIYLLALKGRLALGLESNGLRTVIDDLLASGATRIIINLEHVDYVDSAG


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