Metagenome Family F051225

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051225
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	79 residues
Representative Sequence	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP
Number of Associated Samples	117
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.72 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	86.81 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.278 % of family members)
Environment Ontology (ENVO)	Unclassified (57.639 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.139 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.92% β-sheet: 10.58% Coil/Unstructured: 62.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF05977	MFS_3	20.83
PF04306	DUF456	19.44
PF01494	FAD_binding_3	18.06
PF12543	DUF3738	4.86
PF08238	Sel1	2.08
PF13577	SnoaL_4	2.08
PF13450	NAD_binding_8	2.08
PF14113	Tae4	1.39
PF07690	MFS_1	0.69
PF01906	YbjQ_1	0.69
PF01053	Cys_Met_Meta_PP	0.69
PF02321	OEP	0.69
PF13380	CoA_binding_2	0.69
PF03781	FGE-sulfatase	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	36.11
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	20.83
COG2839	Uncharacterized conserved protein YqgC, DUF456 family	Function unknown [S]	19.44
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	18.06
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	18.06
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	18.06
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.39
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.69
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.69
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.69
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.69
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.69
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.69
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.69
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.69
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.69
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.69
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.69
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.69

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.17 %
Unclassified	root	N/A	20.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.17 %
Unclassified	root	N/A	20.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.17 %
Unclassified	root	N/A	20.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Unclassified	root	N/A	20.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.36 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.97 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.08 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.36 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	15.97 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.08 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.36 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	15.97 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.08 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.39 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.36 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	15.97 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.08 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.39 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.69 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_111475825	Not Available	742	Open in IMG/M
3300000956\|JGI10216J12902_113560392	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300004114\|Ga0062593_100075054	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300004157\|Ga0062590_102130434	Not Available	585	Open in IMG/M
3300004463\|Ga0063356_100072222	All Organisms → cellular organisms → Bacteria	3598	Open in IMG/M
3300004480\|Ga0062592_101764866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	604	Open in IMG/M
3300005093\|Ga0062594_100570014	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300005183\|Ga0068993_10184790	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	718	Open in IMG/M
3300005328\|Ga0070676_10014692	All Organisms → cellular organisms → Bacteria	4306	Open in IMG/M
3300005328\|Ga0070676_10278549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1126	Open in IMG/M
3300005331\|Ga0070670_100204044	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300005331\|Ga0070670_101363724	Not Available	650	Open in IMG/M
3300005333\|Ga0070677_10126490	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300005333\|Ga0070677_10708382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005334\|Ga0068869_100030669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3777	Open in IMG/M
3300005334\|Ga0068869_100367014	All Organisms → cellular organisms → Bacteria → Proteobacteria	1177	Open in IMG/M
3300005335\|Ga0070666_10408161	Not Available	977	Open in IMG/M
3300005338\|Ga0068868_100879484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	813	Open in IMG/M
3300005340\|Ga0070689_100788599	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300005344\|Ga0070661_100090210	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300005353\|Ga0070669_100294998	Not Available	1303	Open in IMG/M
3300005354\|Ga0070675_100254396	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300005364\|Ga0070673_100203322	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300005364\|Ga0070673_101099917	Not Available	742	Open in IMG/M
3300005365\|Ga0070688_100613701	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300005367\|Ga0070667_100868168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300005367\|Ga0070667_102157797	Not Available	525	Open in IMG/M
3300005440\|Ga0070705_100615266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	842	Open in IMG/M
3300005467\|Ga0070706_102179749	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005543\|Ga0070672_100032176	All Organisms → cellular organisms → Bacteria	3957	Open in IMG/M
3300005543\|Ga0070672_100955240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300005544\|Ga0070686_100448867	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005546\|Ga0070696_100523625	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300005564\|Ga0070664_102270324	Not Available	515	Open in IMG/M
3300005577\|Ga0068857_101542088	Not Available	648	Open in IMG/M
3300005578\|Ga0068854_100094600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2229	Open in IMG/M
3300005615\|Ga0070702_100011137	All Organisms → cellular organisms → Bacteria	4464	Open in IMG/M
3300005617\|Ga0068859_100041788	All Organisms → cellular organisms → Bacteria	4605	Open in IMG/M
3300005617\|Ga0068859_101782457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	680	Open in IMG/M
3300005719\|Ga0068861_100312599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1365	Open in IMG/M
3300005840\|Ga0068870_10424156	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005840\|Ga0068870_10737920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	683	Open in IMG/M
3300005841\|Ga0068863_100373451	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300005841\|Ga0068863_100988955	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005842\|Ga0068858_100361647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1391	Open in IMG/M
3300005844\|Ga0068862_102590412	Not Available	519	Open in IMG/M
3300006046\|Ga0066652_100178201	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300006237\|Ga0097621_100531260	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1069	Open in IMG/M
3300006755\|Ga0079222_11424342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300006854\|Ga0075425_101526844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	754	Open in IMG/M
3300006876\|Ga0079217_10419946	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300006894\|Ga0079215_10279777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300006918\|Ga0079216_10320131	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300007004\|Ga0079218_10707716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300009098\|Ga0105245_10693247	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300009100\|Ga0075418_11930476	Not Available	643	Open in IMG/M
3300009148\|Ga0105243_10964630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	853	Open in IMG/M
3300009156\|Ga0111538_10571470	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300009174\|Ga0105241_12261854	Not Available	540	Open in IMG/M
3300009177\|Ga0105248_10622377	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300009177\|Ga0105248_11625119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	732	Open in IMG/M
3300009553\|Ga0105249_10681694	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300009610\|Ga0105340_1083402	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300012883\|Ga0157281_1059053	Not Available	610	Open in IMG/M
3300013296\|Ga0157374_10762476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	982	Open in IMG/M
3300013306\|Ga0163162_10717399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1121	Open in IMG/M
3300013308\|Ga0157375_12138419	Not Available	666	Open in IMG/M
3300014269\|Ga0075302_1051984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	828	Open in IMG/M
3300014326\|Ga0157380_10136745	All Organisms → cellular organisms → Bacteria → Acidobacteria	2099	Open in IMG/M
3300014326\|Ga0157380_11331686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300014969\|Ga0157376_11086570	Not Available	825	Open in IMG/M
3300014969\|Ga0157376_11119762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300015373\|Ga0132257_100082957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3655	Open in IMG/M
3300015374\|Ga0132255_100618629	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300017965\|Ga0190266_10096860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1200	Open in IMG/M
3300018466\|Ga0190268_11165986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300018466\|Ga0190268_11802934	Not Available	552	Open in IMG/M
3300018469\|Ga0190270_10038149	All Organisms → cellular organisms → Bacteria	3215	Open in IMG/M
3300018476\|Ga0190274_10483561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1232	Open in IMG/M
3300018476\|Ga0190274_10663422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1081	Open in IMG/M
3300018476\|Ga0190274_11271165	Not Available	822	Open in IMG/M
3300018476\|Ga0190274_11343526	Not Available	803	Open in IMG/M
3300018476\|Ga0190274_13637455	Not Available	521	Open in IMG/M
3300018481\|Ga0190271_10076339	All Organisms → cellular organisms → Bacteria	2985	Open in IMG/M
3300018481\|Ga0190271_11018091	Not Available	953	Open in IMG/M
3300019361\|Ga0173482_10047868	All Organisms → cellular organisms → Bacteria → Proteobacteria	1376	Open in IMG/M
3300019362\|Ga0173479_10205054	Not Available	835	Open in IMG/M
3300019362\|Ga0173479_10559221	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300020034\|Ga0193753_10025343	All Organisms → cellular organisms → Bacteria	3431	Open in IMG/M
3300021445\|Ga0182009_10692984	Not Available	551	Open in IMG/M
3300022911\|Ga0247783_1064739	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300023064\|Ga0247801_1078039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300023275\|Ga0247776_10214979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300025321\|Ga0207656_10042404	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300025893\|Ga0207682_10017566	All Organisms → cellular organisms → Bacteria	2794	Open in IMG/M
3300025900\|Ga0207710_10543835	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300025901\|Ga0207688_10353740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300025907\|Ga0207645_10092237	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300025907\|Ga0207645_10727344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	675	Open in IMG/M
3300025908\|Ga0207643_10056221	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300025918\|Ga0207662_10016481	All Organisms → cellular organisms → Bacteria	4171	Open in IMG/M
3300025920\|Ga0207649_11176947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300025922\|Ga0207646_10909225	Not Available	780	Open in IMG/M
3300025923\|Ga0207681_10363830	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300025923\|Ga0207681_11699226	Not Available	527	Open in IMG/M
3300025925\|Ga0207650_10010080	All Organisms → cellular organisms → Bacteria	6474	Open in IMG/M
3300025926\|Ga0207659_10562865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	970	Open in IMG/M
3300025930\|Ga0207701_10193341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1791	Open in IMG/M
3300025933\|Ga0207706_11273760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300025936\|Ga0207670_10203549	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300025941\|Ga0207711_10584573	Not Available	1042	Open in IMG/M
3300025942\|Ga0207689_10309386	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300025960\|Ga0207651_10855417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300025961\|Ga0207712_11032786	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300025972\|Ga0207668_10876599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300025986\|Ga0207658_10987966	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300026035\|Ga0207703_11157598	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300026067\|Ga0207678_10048572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3668	Open in IMG/M
3300026075\|Ga0207708_10492980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300026089\|Ga0207648_11593291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	614	Open in IMG/M
3300026089\|Ga0207648_12275800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	502	Open in IMG/M
3300026095\|Ga0207676_10995744	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300026116\|Ga0207674_11812413	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300026118\|Ga0207675_100226403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1803	Open in IMG/M
3300027639\|Ga0209387_1219046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300027691\|Ga0209485_1348196	Not Available	501	Open in IMG/M
3300028710\|Ga0307322_10219942	Not Available	522	Open in IMG/M
3300028802\|Ga0307503_10332789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300031366\|Ga0307506_10018527	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300031366\|Ga0307506_10203649	Not Available	728	Open in IMG/M
3300031538\|Ga0310888_10776628	Not Available	592	Open in IMG/M
3300031547\|Ga0310887_10088135	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300031731\|Ga0307405_11162003	Not Available	666	Open in IMG/M
3300031731\|Ga0307405_12136705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300031847\|Ga0310907_10305037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	803	Open in IMG/M
3300031908\|Ga0310900_11963881	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300031938\|Ga0308175_101437076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	770	Open in IMG/M
3300031944\|Ga0310884_10467088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300032002\|Ga0307416_101003573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300032002\|Ga0307416_103423969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300032005\|Ga0307411_11941867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300032144\|Ga0315910_10408274	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300032157\|Ga0315912_10252817	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300034151\|Ga0364935_0038667	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.94%
Environmental	Environmental	43.06%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.94%
Terrestrial	Environmental → Terrestrial	41.67%
Aquatic	Environmental → Aquatic	1.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.44%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.39%
Marine	Environmental → Aquatic → Marine	0.69%
Sediment	Environmental → Aquatic → Sediment	0.69%
Floodplain	Environmental → Terrestrial → Floodplain	0.69%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.97%
Loam	Environmental → Terrestrial → Soil → Loam	7.64%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.17%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.08%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.39%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.39%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022911	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L064-202C-5	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1114758252	3300000956	Soil	MPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVIPQPEGNVRSTSPKTRAPLGIITLPRVEP*
JGI10216J12902_1135603922	3300000956	Soil	MPILRRQIRRDSRQSTPAALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPRVRAPLGILTLPRIEP*
Ga0062593_1000750542	3300004114	Soil	MPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSTSPKTRAPLGIITLPRVEP*
Ga0062590_1021304342	3300004157	Soil	MPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSTSPKTRAPLGI
Ga0063356_1000722222	3300004463	Arabidopsis Thaliana Rhizosphere	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGIITLPRIEP*
Ga0062592_1017648661	3300004480	Soil	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGIITLPRI
Ga0062594_1005700141	3300005093	Soil	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRIEP*
Ga0068993_101847902	3300005183	Natural And Restored Wetlands	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP*
Ga0070676_100146926	3300005328	Miscanthus Rhizosphere	MLRKIRSVSIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRIEP*
Ga0070676_102785491	3300005328	Miscanthus Rhizosphere	MPILRRQIRRQIRQSTPTALARTARRGSLDDSRLLTFMDFAGNVVGVVTHTQPEAEVRATGPKSRAPLGIITLPRIEP*
Ga0070670_1002040442	3300005331	Switchgrass Rhizosphere	MPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRTRAPLGILTLPRIEP*
Ga0070670_1013637241	3300005331	Switchgrass Rhizosphere	MALLRRQIRRDSRQSTPAALARSARCGSLDDSRILTFIDLSGNVVGVVTQPEVETRSTAPKTRAPLGILTLPRIEP*
Ga0070677_101264902	3300005333	Miscanthus Rhizosphere	MLRKIPSISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP*
Ga0070677_107083821	3300005333	Miscanthus Rhizosphere	QFFARPCSSMPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSTSPKTRAPLGIITLPRVEP*
Ga0068869_1000306692	3300005334	Miscanthus Rhizosphere	MALQKRQIRRDSRHSTPTALARIARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIQP*
Ga0068869_1003670141	3300005334	Miscanthus Rhizosphere	MSILRRQIRRDSRESTPTALARTARRGSLDDSRILTFTDLSGNIVGVVTQPEVDTRSTAPKTRAPLGIITLPRIEP*
Ga0070666_104081611	3300005335	Switchgrass Rhizosphere	MSIMRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRLEP*
Ga0068868_1008794842	3300005338	Miscanthus Rhizosphere	MALLRRQIRRDSRQSTPGALALSARRGSLDDSRILTFSDLSGNVVGVVTHQPEVEPRVVAPKTRAPLGILTLPRIEP*
Ga0070689_1007885991	3300005340	Switchgrass Rhizosphere	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVETRSTAPKARAPLGILTLPRIEP*
Ga0070661_1000902105	3300005344	Corn Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRTRAPLGILTLPRIEP*
Ga0070669_1002949981	3300005353	Switchgrass Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKIRAPLGILTLPRIEP*
Ga0070675_1002543961	3300005354	Miscanthus Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTLPRLEP*
Ga0070673_1002033221	3300005364	Switchgrass Rhizosphere	GGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRIEP*
Ga0070673_1010999171	3300005364	Switchgrass Rhizosphere	MPIVRRQIRREIRQTTPTALARSARCGSIDDSRLLTFTDLAGNVVGVVTQPEVDVRSTAPKTRAPFGILSLPRIEP*
Ga0070688_1006137012	3300005365	Switchgrass Rhizosphere	MPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTLPRIEP*
Ga0070667_1008681681	3300005367	Switchgrass Rhizosphere	MPTLRRQIRKQIRQTTPAALADSARRGSLDDFRLLTFTDLSGNVVGVITQPEVDVRSSGPKTRAPLGIITLPCIEP*
Ga0070667_1021577971	3300005367	Switchgrass Rhizosphere	MLRKMLDIMPLLRRQIRRDSRQSTPAALARSARCGSLDDSRILTFIDLSGNVVGVVTQPEIEPRATAPKTRAPLGILTLPRIEP*
Ga0070705_1006152662	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRLEP*
Ga0070706_1021797491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SLGGRSQPMAIMRRQTRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNIVGVVTQPEVDTRSTAPKARAPLGILTLPRIEP*
Ga0070672_1000321766	3300005543	Miscanthus Rhizosphere	MPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTLPRLEP*
Ga0070672_1009552402	3300005543	Miscanthus Rhizosphere	SMPTLRRQIRKQIRQTTPAALADSARRGSLDDFRLLTFTDLSGNVVGVITQPEVDVRSSGPKTRAPLGIITLPCIEP*
Ga0070686_1004488672	3300005544	Switchgrass Rhizosphere	MPILRRQIRRDSKLSTPTALARTARCGSLDDSRILTFIDLSGNVVGVVTHPEVETRSTAPKARAPLGILTLPRIEP*
Ga0070696_1005236251	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLRKMPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRIEP*
Ga0070664_1022703241	3300005564	Corn Rhizosphere	MLRKMPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTLPRLEP*
Ga0068857_1015420881	3300005577	Corn Rhizosphere	MSIMRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRL
Ga0068854_1000946001	3300005578	Corn Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGIL
Ga0070702_1000111376	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRATAPKTRAPLGILTLPRIEP*
Ga0068859_1000417883	3300005617	Switchgrass Rhizosphere	MPILRRQIRRDSKLSTPTALARTARCGSLDDSRILTFIDLSGNVVGVVTQPEVETRSTAPKARAPLGILTLPRIEP*
Ga0068859_1017824571	3300005617	Switchgrass Rhizosphere	MSIMSRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRLEP*
Ga0068861_1003125992	3300005719	Switchgrass Rhizosphere	MALLRRQLRRDSRHSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP*
Ga0068870_104241562	3300005840	Miscanthus Rhizosphere	MPLLRRQIKRDSRQSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPDVESRSTAPKTRAPLGILTLPRNS*
Ga0068870_107379201	3300005840	Miscanthus Rhizosphere	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKT
Ga0068863_1003734512	3300005841	Switchgrass Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRIRAPLGILTLPRIEP*
Ga0068863_1009889552	3300005841	Switchgrass Rhizosphere	MLRKMPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSVNVVGFVTQPDVDTRSTAPKTRAPLGILTLPRLEP*
Ga0068858_1003616473	3300005842	Switchgrass Rhizosphere	MLRKMLDIMPLLRRQIRRDSRQSTPTALARSARCGSLDDSRILTFIDLSGNVVGVVTQPEIEPRATAPKTRAPLGILTLPRIEP*
Ga0068862_1025904121	3300005844	Switchgrass Rhizosphere	MLDIMPLLRRQIRRDSRQSTPAALARSARCGSLDDSRILTFIDLSGNVVGVVTQPEVETRATAPKTRAPLGILTLPRIEP*
Ga0066652_1001782012	3300006046	Soil	MPFILIGGSSHDMALLRRQLRRDSRQSTPTALARTARCGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP*
Ga0097621_1005312602	3300006237	Miscanthus Rhizosphere	MPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTL
Ga0079222_114243422	3300006755	Agricultural Soil	MSILRRQIKRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSAAPKTRAPLGIITLPRIEP*
Ga0075425_1015268441	3300006854	Populus Rhizosphere	MALLRRQIRRDSRHSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVETRSTAPKTRAPLGILTLPRIEP*
Ga0079217_104199461	3300006876	Agricultural Soil	RDSKQSTPNALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTLSTAPKRRAPLGILTLPRIEP*
Ga0079215_102797771	3300006894	Agricultural Soil	MALLRRQIKRDSKQSTPNALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTLSTAPKRRAPLGILTLPRIEP*
Ga0079216_103201312	3300006918	Agricultural Soil	MALLRRQIRRDSRQSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPRVRAPLGILTLPRIEP*
Ga0079218_107077161	3300007004	Agricultural Soil	MPILRRQIRREIRQTTPSALSDSARRGSIDDSRLITFVDLAGNVVGVITQPDVDVRSSAPRPRAPLGVITLPRVEP*
Ga0105245_106932472	3300009098	Miscanthus Rhizosphere	MALLRRQIRRDSRQSTPGALALSARRGSLDDSRILTFTDLSGNVVGVVTQPEVETRVVAPKTRAPLGILTLPRIEP*
Ga0075418_119304762	3300009100	Populus Rhizosphere	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPKTRAPLGILTLPRIEP*
Ga0105243_109646302	3300009148	Miscanthus Rhizosphere	MLRKIPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP*
Ga0111538_105714703	3300009156	Populus Rhizosphere	MRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRLEP*
Ga0105241_122618541	3300009174	Corn Rhizosphere	MLRKIPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRIEP*
Ga0105248_106223772	3300009177	Switchgrass Rhizosphere	MLRKMPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTLPRIEP*
Ga0105248_116251192	3300009177	Switchgrass Rhizosphere	MLRKMPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRIRAPLGILTLPRIEP*
Ga0105249_106816941	3300009553	Switchgrass Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVVVVTQPEVDTRTTAPKTRAPLGILTLPRIEP*
Ga0105340_10834021	3300009610	Soil	MALLRRQIKRDSRQSTPTALARSARRGSLDDSRILTFIDLAGNVVGVLTQPEVDTGSTAPKRRAPLGILTLPRIEP*
Ga0157281_10590531	3300012883	Soil	MPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSTSPKTRAPLG
Ga0157374_107624761	3300013296	Miscanthus Rhizosphere	MLRKMPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRTRAPL
Ga0163162_107173991	3300013306	Switchgrass Rhizosphere	MLRKMPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLP
Ga0157375_121384192	3300013308	Miscanthus Rhizosphere	MLRKIPFISIGGSSHDMALLRRQLRRDSRQSTPTGLARAARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP
Ga0075302_10519841	3300014269	Natural And Restored Wetlands	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPR
Ga0157380_101367452	3300014326	Switchgrass Rhizosphere	MRRQIRRDSRQSTPTALARTARRGSLDDYRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRLEP*
Ga0157380_113316862	3300014326	Switchgrass Rhizosphere	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTASKTRAPLGILTLPRIEP*
Ga0157376_110865702	3300014969	Miscanthus Rhizosphere	MLRKMPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRTRAPLGILTLPSIEP*
Ga0157376_111197622	3300014969	Miscanthus Rhizosphere	MPILRRQIKQTTPTALALTARRGSIDDSRLLTFTDLAGNVVGVITHPDVEPRSTAPKTRAPLGILTLPHLEP*
Ga0132257_1000829572	3300015373	Arabidopsis Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILPFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRMEP*
Ga0132255_1006186291	3300015374	Arabidopsis Rhizosphere	SIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTLPRLEP*
Ga0190266_100968602	3300017965	Soil	MTTLRRQIRQQIRQSTPAALARTARRGSLDDSRLLTFMDFAGNVVGVVTQPEVDVRESGPKTRAPLGIITLPRIEP
Ga0190268_111659862	3300018466	Soil	MALLRRQIKRDSKQSTPNALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTLSTAPKRRAPLGILTLPRIEP
Ga0190268_118029342	3300018466	Soil	MSILRRQIRRDSRQSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKHRAPLGILTLPRIEP
Ga0190270_100381492	3300018469	Soil	MPTLRRQIRRQIRQSTPTALARTARRGSLDDSRLLTFMDLAGNVVGVVTHTQPEVEVRATGPKSRAPLGIITLPRIEP
Ga0190274_104835612	3300018476	Soil	MALLRRQIKRDSRQSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPIRRAPLGILTLPRIEP
Ga0190274_106634221	3300018476	Soil	MLRKISFISFGGSAHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP
Ga0190274_112711652	3300018476	Soil	MPTLRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSTSPKPRAPLGIITLPGVEP
Ga0190274_113435261	3300018476	Soil	MTTLRRQVRQQIRQSTPAALARTARRGSLDDSRLLTFMDFAGNVVGVVTQPEVDVRESGPKTRAPLGIISLPRIEP
Ga0190274_136374552	3300018476	Soil	MALLRRQIKRDSRQSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDARSTAPKRRAPLGILTLPRIEP
Ga0190271_100763392	3300018481	Soil	MPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNIRSTSPKTRAPLGVITLPRVEP
Ga0190271_110180911	3300018481	Soil	MPTLRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNLRSTSRKTSAPLGIITLPRVEP
Ga0173482_100478683	3300019361	Soil	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLG
Ga0173479_102050541	3300019362	Soil	MPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSTSPKTRAPLGIITLPRVEP
Ga0173479_105592211	3300019362	Soil	MPTLRRQIRKQIRQTTPAALADSARRGSLDDFRLLTFTDLSGNVVGVITQPEVDVRSSGPKTRAPLGIITLPCIEP
Ga0193753_100253434	3300020034	Soil	MRTLRRRNRQTTPTALARTARQGSLDDARLMTFVDLRGNVVGVLTQPEVYSRPAAPKPIAPMGIISRPQVNR
Ga0182009_106929841	3300021445	Soil	MALLRRQIRRDSRHSTPGALALSARRGSLDDSRLLTFIDLSGNVVGVVTQPEVETRVVAAKTRAPLGVLTLPRIEP
Ga0247783_10647391	3300022911	Plant Litter	FPRTFREGWCVRFVQFFARPCSSMPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSTSPKTRAPLGIITLPRVEP
Ga0247801_10780391	3300023064	Soil	QTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSTSPKTRAPLGIITLPRVEP
Ga0247776_102149791	3300023275	Plant Litter	VRFVQFFARPCSSMPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSTSPKTRAPLGIITLPRVEP
Ga0207656_100424042	3300025321	Corn Rhizosphere	MALLRRQIRRDSRQSTPGALALSARRGSLDDSRILTFSDLSGNVVGVVTHQPEVEPRVVAPKTRAPLGILTLPRIEP
Ga0207682_100175663	3300025893	Miscanthus Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRIEP
Ga0207710_105438351	3300025900	Switchgrass Rhizosphere	MPILRRQIRRDSKLSTPTALARTARCGSLDDSRILTFIDLSGNVVGVVTHPEVETRSTAPKARAPLGILTLPRIEP
Ga0207688_103537401	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSIMRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRLEP
Ga0207645_100922373	3300025907	Miscanthus Rhizosphere	MPILRRQIRRQIRQSTPTALARTARRGSLDDSRLLTFMDFAGNVVGVVTHTQPEAEVRATGPKSRAPLGIITLPRIEP
Ga0207645_107273441	3300025907	Miscanthus Rhizosphere	MLRKIPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP
Ga0207643_100562213	3300025908	Miscanthus Rhizosphere	MPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTLPRLEP
Ga0207662_100164816	3300025918	Switchgrass Rhizosphere	MLRKIRSVSIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRIEP
Ga0207649_111769471	3300025920	Corn Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRTRAPLGILTLPRIEP
Ga0207646_109092251	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAIMRRQTRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVETRSTAPKARAPLGILTLPRIEP
Ga0207681_103638303	3300025923	Switchgrass Rhizosphere	RESTPTALARTARRGSLDDSRILTFTDLSGNIVGVVTQPEVDTRSTAPKTRAPLGIITLPRIEP
Ga0207681_116992262	3300025923	Switchgrass Rhizosphere	MALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKIRAPLGILTLPRIEP
Ga0207650_100100806	3300025925	Switchgrass Rhizosphere	MLRKMPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRTRAPLGILTLPRIEP
Ga0207659_105628652	3300025926	Miscanthus Rhizosphere	MPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRIR
Ga0207701_101933412	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPILRRQIRRQIRQSTPTALARTARHGSLDDSRLLTFMDFAGNVVGVVTHTQPEAEVRATGPKSRAPLGIITLPRIEP
Ga0207706_112737602	3300025933	Corn Rhizosphere	STPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTLPRLEP
Ga0207670_102035491	3300025936	Switchgrass Rhizosphere	DSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRIEP
Ga0207711_105845731	3300025941	Switchgrass Rhizosphere	MLRKMPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRIRAPLGILTLPRIEP
Ga0207689_103093863	3300025942	Miscanthus Rhizosphere	MSILRRQIRRDSRESTPTALARTARRGSLDDSRILTFTDLSGNIVGVVTQPEVDTRSTAPKTRAPLGIITLPRIEP
Ga0207651_108554171	3300025960	Switchgrass Rhizosphere	MPFVSIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFTDLSGNVVGVVTQPEVDTRTTAPKTRAPLGILTLPRIEP
Ga0207712_110327861	3300025961	Switchgrass Rhizosphere	MSILRRQIRRDSRESTPTALARTARRGSLDDSRILTFTDLSGNVVVVVTQPEVDTRTTAPKTRAPLGILTLPRIEP
Ga0207668_108765991	3300025972	Switchgrass Rhizosphere	LRRQIRRQIRQSTPTALARTARRGSLDDSRLLTFMDFAGNVVGVVTHTQPEAEVRATGPKSRAPLGIITLPRIEP
Ga0207658_109879661	3300025986	Switchgrass Rhizosphere	GGSSHDMALLRRQLRRDSRQSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP
Ga0207703_111575982	3300026035	Switchgrass Rhizosphere	MLRKMLDIMPLLRRQIRRDSRQSTPTALARSARCGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPLGILTLPRLEP
Ga0207678_100485721	3300026067	Corn Rhizosphere	MALLRRQIKRDSRSSTPTALARTARRGSLDDSRLLTFTDLSGNIVGVVTQPEIETRSTAPRPRAPLGI
Ga0207708_104929801	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRLEP
Ga0207648_115932912	3300026089	Miscanthus Rhizosphere	MPFVSIGGSSDDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPDVDTRSTAPKTRAPL
Ga0207648_122758002	3300026089	Miscanthus Rhizosphere	MPILRRQIRRQIRQSTPTALARTARRGSLDDSRLLTFMDFAGNVVGVVTHTQPEAEVRATGPKSRAPLEASP
Ga0207676_109957441	3300026095	Switchgrass Rhizosphere	QSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRTRAPLGILTLPRIEP
Ga0207674_118124132	3300026116	Corn Rhizosphere	MPFISIGGSSHDMALLRRQLRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDSRSTAPRTRAPLGILTLPRIEP
Ga0207675_1002264032	3300026118	Switchgrass Rhizosphere	MLRKMPFVSIGGSSHDMALLRRQLRRDSRHSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP
Ga0209387_12190462	3300027639	Agricultural Soil	WSDSMALLRRQIKRDSKQSTPNALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTLSTAPKRRAPLGILTLPRIEP
Ga0209485_13481961	3300027691	Agricultural Soil	MALLRRQIRRDSRQSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPRVRAPLGILTLPRIEP
Ga0307322_102199421	3300028710	Soil	MPTLRRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNIVGVITQPEVNVRSASPKTRAPLGIITLPRVEP
Ga0307503_103327891	3300028802	Soil	FVQFFARSRSSMPTLRQIRKQIRQTTPAALADTARRGSLDDFRLLTFTDLSGNVVGVITQPEVNVRSTSPKTRAPLGILTLPRVEP
Ga0307506_100185271	3300031366	Soil	MPFISIGGSSHDMALLRRQLRRDSRQSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP
Ga0307506_102036492	3300031366	Soil	MPFILIGGSSHDMALLRRQLRRDSRQSTPTALARTARCGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP
Ga0310888_107766281	3300031538	Soil	MSILRRQIRRDSRHSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTASKTRAPLGILTLPRIEP
Ga0310887_100881352	3300031547	Soil	MSILRRQIRRDSRHSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSSAPKTRAPLGILTLPRIEP
Ga0307405_111620032	3300031731	Rhizosphere	MALLRRQIRRDSRYSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAAKVRAPLGILTLPRIEP
Ga0307405_121367052	3300031731	Rhizosphere	MALLRRQIRRDSRQSTPTALARSARRGSLDDSRLLTFIDLSGNVVGVVTQPEVDTRSTAPRVRAPLGILTFPRIEP
Ga0310907_103050371	3300031847	Soil	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTASKTRAPLGILTLPRIEP
Ga0310900_119638812	3300031908	Soil	MALMRRQIRRDSRYSTPGALALSARRGSLDDSRILTFIDLSGNVVGVVTHQPEIEPCSTAPKTRAPLGILTLPNIEP
Ga0308175_1014370762	3300031938	Soil	MALLRRQIKRDSRSSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVESCSTAPKTRAPLGILSLPRIEP
Ga0310884_104670882	3300031944	Soil	SMSILRRQIRRDSKQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTASKTRAPLGILTLPRIEP
Ga0307416_1010035732	3300032002	Rhizosphere	MPILRRQIRRDSRQSTPAALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPRVRAPLGILTLPRIEP
Ga0307416_1034239691	3300032002	Rhizosphere	MALLRRQIKRDSRQSTPTALARSARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPRVRAPLGILTLPRIEP
Ga0307411_119418672	3300032005	Rhizosphere	MPILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVMTQPEVDTRSTAPKVRAPLGILTRPRIEP
Ga0315910_104082742	3300032144	Soil	MSILRRQIRRDSRQSTPTALARTARRGSLDDSRILTFIDLSGNVVGVVTQPEVDTRSTAPKTRAPLGILTLPRIEP
Ga0315912_102528171	3300032157	Soil	MPILRRQIRKQIRQSTPAALANSARRGSLDDFRLLTFTDLSGNVVGVITHETALGSFAQPEAEVRSTAPKTRAPLGIITLPRIEP
Ga0364935_0038667_590_820	3300034151	Sediment	MALLRRQIKRDSRQSTPTALARSARRGSLDDSRILTFIDLAGNVVGVVTQPEVDTGSSAPKRRAPLGILTLPRIEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051225

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences