NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F051191

Metagenome / Metatranscriptome Family F051191

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F051191
Family Type Metagenome / Metatranscriptome
Number of Sequences 144
Average Sequence Length 53 residues
Representative Sequence TDEMIASLLADPFPASRRPRLKLAGLIPVVHGFGALTTFMLAVLAAIAAR
Number of Associated Samples 125
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.14 %
% of genes near scaffold ends (potentially truncated) 66.67 %
% of genes from short scaffolds (< 2000 bps) 75.69 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (72.222 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(38.194 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.750 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 47.44%    β-sheet: 0.00%    Coil/Unstructured: 52.56%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF02585PIG-L 87.50
PF09995MPAB_Lcp_cat 7.64
PF03109ABC1 1.39
PF01144CoA_trans 0.69
PF01098FTSW_RODA_SPOVE 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 87.50
COG0661Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB familySignal transduction mechanisms [T] 1.39
COG0772Peptodoglycan polymerase FtsW/RodA/SpoVECell cycle control, cell division, chromosome partitioning [D] 0.69
COG1788Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunitLipid transport and metabolism [I] 0.69
COG2057Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunitLipid transport and metabolism [I] 0.69
COG4670Acyl CoA:acetate/3-ketoacid CoA transferaseLipid transport and metabolism [I] 0.69


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.22 %
UnclassifiedrootN/A27.78 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559005|cont_contig79988Not Available678Open in IMG/M
3300004092|Ga0062389_103016562Not Available630Open in IMG/M
3300005166|Ga0066674_10090158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1417Open in IMG/M
3300005167|Ga0066672_10497830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia792Open in IMG/M
3300005187|Ga0066675_10114035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1805Open in IMG/M
3300005344|Ga0070661_100058170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2833Open in IMG/M
3300005434|Ga0070709_10716566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia779Open in IMG/M
3300005436|Ga0070713_101726319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia608Open in IMG/M
3300005467|Ga0070706_101766443Not Available563Open in IMG/M
3300005468|Ga0070707_101937716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia557Open in IMG/M
3300005557|Ga0066704_10678094All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia652Open in IMG/M
3300005559|Ga0066700_11082040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia525Open in IMG/M
3300005560|Ga0066670_10812951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia567Open in IMG/M
3300005952|Ga0080026_10055108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1048Open in IMG/M
3300006047|Ga0075024_100916019Not Available500Open in IMG/M
3300006162|Ga0075030_101575254Not Available514Open in IMG/M
3300006903|Ga0075426_10297514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1180Open in IMG/M
3300009520|Ga0116214_1336559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia582Open in IMG/M
3300009698|Ga0116216_10396024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia838Open in IMG/M
3300009700|Ga0116217_10542704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia728Open in IMG/M
3300010043|Ga0126380_10673047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia827Open in IMG/M
3300010335|Ga0134063_10596085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia562Open in IMG/M
3300010339|Ga0074046_10532953All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia699Open in IMG/M
3300010361|Ga0126378_12031817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii655Open in IMG/M
3300010379|Ga0136449_101850072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii900Open in IMG/M
3300010379|Ga0136449_103623484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia585Open in IMG/M
3300010379|Ga0136449_104368607Not Available522Open in IMG/M
3300011120|Ga0150983_10955629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia901Open in IMG/M
3300012189|Ga0137388_10573292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1049Open in IMG/M
3300012207|Ga0137381_10903994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia763Open in IMG/M
3300012209|Ga0137379_11639714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia541Open in IMG/M
3300012209|Ga0137379_11696020Not Available528Open in IMG/M
3300012349|Ga0137387_10567897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia823Open in IMG/M
3300012349|Ga0137387_11021510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300012361|Ga0137360_10793151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia815Open in IMG/M
3300012362|Ga0137361_10718104Not Available912Open in IMG/M
3300012927|Ga0137416_11867278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia550Open in IMG/M
3300012960|Ga0164301_11259653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia597Open in IMG/M
3300012971|Ga0126369_10796940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1027Open in IMG/M
3300012977|Ga0134087_10611535All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia566Open in IMG/M
3300014838|Ga0182030_11291346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium616Open in IMG/M
3300015372|Ga0132256_101176561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia881Open in IMG/M
3300015374|Ga0132255_105571366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii533Open in IMG/M
3300016270|Ga0182036_11906433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia504Open in IMG/M
3300016750|Ga0181505_10709702Not Available519Open in IMG/M
3300017823|Ga0187818_10314650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia688Open in IMG/M
3300017924|Ga0187820_1195452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia629Open in IMG/M
3300017927|Ga0187824_10256116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia609Open in IMG/M
3300017947|Ga0187785_10174382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia919Open in IMG/M
3300017993|Ga0187823_10207282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia646Open in IMG/M
3300017993|Ga0187823_10301947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia557Open in IMG/M
3300018001|Ga0187815_10056860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1645Open in IMG/M
3300018032|Ga0187788_10238381Not Available717Open in IMG/M
3300018060|Ga0187765_10493901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia773Open in IMG/M
3300018060|Ga0187765_10948981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia586Open in IMG/M
3300018085|Ga0187772_10742778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia705Open in IMG/M
3300018086|Ga0187769_10997003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia634Open in IMG/M
3300020579|Ga0210407_10664770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia809Open in IMG/M
3300020580|Ga0210403_10518922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia967Open in IMG/M
3300020581|Ga0210399_10729640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia813Open in IMG/M
3300021088|Ga0210404_10159499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1187Open in IMG/M
3300021168|Ga0210406_11006733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia620Open in IMG/M
3300021178|Ga0210408_11423297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia521Open in IMG/M
3300021181|Ga0210388_10199126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1752Open in IMG/M
3300021358|Ga0213873_10086015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia887Open in IMG/M
3300021402|Ga0210385_10569337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia862Open in IMG/M
3300021402|Ga0210385_11081920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia616Open in IMG/M
3300021403|Ga0210397_10355744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1086Open in IMG/M
3300021432|Ga0210384_10304962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1433Open in IMG/M
3300021475|Ga0210392_10823402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia693Open in IMG/M
3300022718|Ga0242675_1033225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia794Open in IMG/M
3300025898|Ga0207692_10709604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia653Open in IMG/M
3300027684|Ga0209626_1033170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1266Open in IMG/M
3300028742|Ga0302220_10157814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia862Open in IMG/M
3300031543|Ga0318516_10059404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii2100Open in IMG/M
3300031564|Ga0318573_10205306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1045Open in IMG/M
3300031572|Ga0318515_10286646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia883Open in IMG/M
3300031668|Ga0318542_10245237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia910Open in IMG/M
3300031680|Ga0318574_10461633All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia743Open in IMG/M
3300031681|Ga0318572_10498311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia726Open in IMG/M
3300031744|Ga0306918_10218035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1445Open in IMG/M
3300031748|Ga0318492_10278194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia868Open in IMG/M
3300031769|Ga0318526_10070620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1364Open in IMG/M
3300031769|Ga0318526_10209206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia797Open in IMG/M
3300031779|Ga0318566_10510420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia588Open in IMG/M
3300031799|Ga0318565_10247058All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia867Open in IMG/M
3300031799|Ga0318565_10465881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia611Open in IMG/M
3300031819|Ga0318568_10633389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia665Open in IMG/M
3300031819|Ga0318568_10950038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia531Open in IMG/M
3300031821|Ga0318567_10019859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3232Open in IMG/M
3300031831|Ga0318564_10082203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1424Open in IMG/M
3300031832|Ga0318499_10131265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia975Open in IMG/M
3300031945|Ga0310913_10858657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia639Open in IMG/M
3300031945|Ga0310913_11008560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia583Open in IMG/M
3300031947|Ga0310909_10244040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1500Open in IMG/M
3300031954|Ga0306926_12583142All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia555Open in IMG/M
3300032001|Ga0306922_10883215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia929Open in IMG/M
3300032008|Ga0318562_10515703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia693Open in IMG/M
3300032009|Ga0318563_10313105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia849Open in IMG/M
3300032052|Ga0318506_10450021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia571Open in IMG/M
3300032052|Ga0318506_10479297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia551Open in IMG/M
3300032054|Ga0318570_10187467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia932Open in IMG/M
3300032067|Ga0318524_10097610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1453Open in IMG/M
3300032089|Ga0318525_10113301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1385Open in IMG/M
3300032089|Ga0318525_10159910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1156Open in IMG/M
3300032094|Ga0318540_10234997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia885Open in IMG/M
3300032261|Ga0306920_100951193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1253Open in IMG/M
3300032770|Ga0335085_10432260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1519Open in IMG/M
3300032782|Ga0335082_10840207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia780Open in IMG/M
3300032828|Ga0335080_10302387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1736Open in IMG/M
3300032892|Ga0335081_10231163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2519Open in IMG/M
3300032954|Ga0335083_10126395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2460Open in IMG/M
3300033134|Ga0335073_10797935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1013Open in IMG/M
3300033289|Ga0310914_10898276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia785Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil38.19%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.25%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.86%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.86%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.86%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.17%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.47%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.78%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.08%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.08%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.39%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.69%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.69%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.69%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.69%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.69%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.69%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.69%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.69%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.69%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.69%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.69%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.69%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.69%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.69%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.69%
SimulatedEngineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated0.69%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559005Simulated microbial communities from Lyon, FranceEngineeredOpen in IMG/M
2189573002Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021358Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3Host-AssociatedOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028742Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033803Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
cont_0988.000049702166559005SimulatedMIAELLADPVPASRRPRLKLVPLIPVAHGFAALTTFMLAVLAAISAR
FE1_002296202189573002Grass SoilASRRPRLKLAGLVPVAHGFGALTTFMLAVLAAVSAR
Ga0062389_10301656223300004092Bog Forest SoilMIASMLADPFPARRRPRPPLVPFIPVLHGFGALTTFMLVVLATISTRLGVF*
Ga0066674_1009015813300005166SoilEDGTVTDKMIADLLADPFPASRRPRLKLAGLVPVAHGCAALITFMFAVLAAIGAR*
Ga0066672_1049783023300005167SoilTPPAEDGTVTDKMIADLLADPFPASRRPRLKLAGLVPVAHGCAALITFMFAVLAAIGAR*
Ga0066675_1011403533300005187SoilDEMIASLLADPFPASRRPRLKLAGLVPVVHGFAALATFMLAVLAAISAR*
Ga0070661_10005817043300005344Corn RhizosphereLADPFPASRRPRLKLAGLVPVAHGFAALTTFMFAVLAAIGAR*
Ga0070709_1071656623300005434Corn, Switchgrass And Miscanthus RhizosphereEDGTVTDKMIADLLADPFPASRRPRLKLAGLVPVAHGFAALTTFMLAVLAAIGAR*
Ga0070713_10172631923300005436Corn, Switchgrass And Miscanthus RhizosphereAPADGDTFTDEMIAELLADPVPASRRPRLKLVPLIPVAHGFAALTTFMLAVLAAISAR*
Ga0070706_10176644313300005467Corn, Switchgrass And Miscanthus RhizosphereMIASFLAEPALGRRAPRVQLVSLIPVIHGFGALTTFMLAVLAAIG
Ga0070707_10193771613300005468Corn, Switchgrass And Miscanthus RhizosphereGAPAPADGDTFTDEMIAELLADPVPASRRPRLKLVPLIPVAHGFAALTTFMLAVLAAISAR*
Ga0066704_1067809413300005557SoilTDEMIASLLADPFPASRRPRLKLAGLVPVVHGFAALATFMLAVLAAISAR*
Ga0066700_1108204023300005559SoilKITDEMIASLLADPFPVRRRPRLKLVPLIPVGHGFAAPATFMLAALAAISAR*
Ga0066670_1081295123300005560SoilIADLLADPFPASRRPRLKLAGLVPVAHGCAALTTFMFAVLAAIGAR*
Ga0080026_1005510823300005952Permafrost SoilADGTVTDEMIASLLADPFPVRRRPRLRLAPLIPVGHGFAALATFMLAMLAAVGAGLGTFRVQ*
Ga0075024_10091601913300006047WatershedsIASMLDDPFPARRQPRLKLVPLIPVVHGFGALTTFMLAVFAAIGTR*
Ga0075030_10157525423300006162WatershedsGQDPDPFTVTDEMIASLLTRPDQARRRRLELVPLVPVVHGVAAMATFVLAVMSAISARLGPPRLGG*
Ga0075021_1050189513300006354WatershedsARRSRVKLVPLIPVVHGFGALTTFMLAVLAISTRLGVF*
Ga0079220_1056447023300006806Agricultural SoilSRRPQLKLAGLIPVAHGFAALTTFMLAVLAAIGAR*
Ga0075426_1029751433300006903Populus RhizosphereEDGTVTDKMIADLLADPFPASRRPRLKLAGLVPVAHGFAALTTFMFAVLAAIAAR*
Ga0116214_133655913300009520Peatlands SoilGGGVPPREDIVTDEMIASLLADPFPARQRSRLKLLPFIPVVHGFGALTTFMLAVLAAIARY*
Ga0116216_1039602423300009698Peatlands SoilGVPREDLVTDEMIASLLADPFPARRRSRLRLLPVIPVVHGFGALTTFMLAVLAAIGTLLGAF*
Ga0116217_1054270413300009700Peatlands SoilVPPRDDIVTDEMIARLLADPFPARRRSRLRLLPFIPVVHGFGALTTFMLAVLAAIAHY*
Ga0126380_1067304713300010043Tropical Forest SoilLADPFPASRRPRLKMAGLVPVAHGFGALTTFMLAVLAAISAR*
Ga0134111_1025612423300010329Grasslands SoilMSLATVPEATPAAEDGTVTDEMIASLLANPFPASRRPRLKLAGLVPVAHRFAALTTFMFAVLAAIGAR*
Ga0134063_1059608513300010335Grasslands SoilTVTDEMIARLLADPFPAPPRPRFKLAGLVPVAHGFAALTTLMLAVLAAIGAR*
Ga0074046_1053295313300010339Bog Forest SoilMIASLLADPFPARRRLKLVPLIPVVHGFGALTTFMLAVLAAITRLGAF*
Ga0126378_1203181713300010361Tropical Forest SoilMIAGLLADPFPAPRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR*
Ga0126379_1275793313300010366Tropical Forest SoilRRRKLKLLPLIPVVHGFAALATFMLAVLAAVNAR*
Ga0136449_10185007213300010379Peatlands SoilMIAGMLADPFPARRPQRRNLAAFIPVLHGFGALTTFMLAVFAAIGTRLGAFRYQ*
Ga0136449_10301824023300010379Peatlands SoilVRQRSRLKLLPFIPVVHGFGALTTFMLAVLAAIARY*
Ga0136449_10362348413300010379Peatlands SoilDTVTDEMIASLLADPYPARRRPRLKLLPLIPVVHGFGALITFMLAVLAAIGTLLGAF*
Ga0136449_10436860723300010379Peatlands SoilMIASLLADPFPAQRRPRLKLVPLIPVVHGFGALTTFMLAVLAAISTRLGAV*
Ga0150983_1095562923300011120Forest SoilFQVTDEMIASMLADPFPDRRRPRPKLVPLIPVVHGFGALTTFMLAVFAAISPRLGVF*
Ga0137388_1057329223300012189Vadose Zone SoilMIASFLAEPAPGRRAPRVQLVSLIPVIHGFGALTTFMLAVLAAIGARLGMFRTQ*
Ga0137381_1090399413300012207Vadose Zone SoilMIASFLAEPAPGRRAPRVQLVSLIPVIHGFGALTTFMLAVLAAIGARLGISRTQ*
Ga0137379_1163971413300012209Vadose Zone SoilAGLLAGQVPAGRRPRLRLAPLIPVGHGVAALTTFMLVVLTAATPRLGLFIIH*
Ga0137379_1169602013300012209Vadose Zone SoilMIASLLADPFPASRRPRLKLAGLVPVAHGFAALTTFMFAVLAAISAR*
Ga0137387_1056789723300012349Vadose Zone SoilIASFLAEPAPGRRAPRVQLVSLIPVIHGFGALTTFMLAVLAAIGARLGMFRTQ*
Ga0137387_1102151023300012349Vadose Zone SoilPEAMSPAEDGTVTDKMIADLLADPFPASRRPRLKLAGLVPVAHGCAALTTFMFAVLAAIGAR*
Ga0137360_1079315123300012361Vadose Zone SoilASLLADPFPGRRRPRLKLAPLIPVGHGFAALATFMLAMLAAVNAGLGIFSTQ*
Ga0137361_1071810423300012362Vadose Zone SoilMIASLLADPFPGRRRPRLKLAPLIPVGHGFAALATFMLAMLAAVNAGLGIFSTQ*
Ga0137416_1186727813300012927Vadose Zone SoilTVTDEMIASLLADPFPGRRRPRLKLAPLIPVGHGFAALATFMLALLAAASARLGIFSMQ*
Ga0164301_1125965313300012960SoilATPPAEDGTVTDKMIADLLADPFPASRRPRLKLAGLVPVAHGCAALTTFMLAVLAAIGAR
Ga0126369_1079694013300012971Tropical Forest SoilAPTATPAADPGTVTDEMIADLLADPFPASRRPRLKMAGLVPVAHGFGALTTFMLAVLAAISAR*
Ga0134087_1061153513300012977Grasslands SoilPPAEDGTVTDKMIADLLADPFPASRRPRLKLAGLVPVAHGCAALTTFMFAVLAAIGAR*
Ga0182030_1129134613300014838BogMIARFLANPFPASRRPRLRLAPLIPVGHGFAALATFMLAMLTAVSARLGLVQTQ*
Ga0132256_10117656123300015372Arabidopsis RhizosphereVTDEMIADLLADPFPASRRPRLKMAGLVPVAHGFAALTTFMLAVLAAISAR*
Ga0132255_10557136623300015374Arabidopsis RhizosphereVTDEMIADLLADPFPASRRPRLKMAGLVPGAHGFGALTTFMLAVLAAISAR*
Ga0182036_1190643313300016270SoilLLADPGPASRRPQLRLLPLIPVVHGFGALTTFMLAVLAAIGARLREHY
Ga0182035_1144420413300016341SoilPATVPEATSAAENGTVTDKKIAELLADPFPASRRPRLKLTGLVPVAHGLGALITFMFAVLAAIGAR
Ga0182039_1072750923300016422SoilAPATIPEATSAAEDGTITDEMIASLLADPFPASRRPRLKLAGLIPVAHGFGALTTFMLAVLAAIAAR
Ga0181505_1070970223300016750PeatlandVPPREDIVTDEMIASLLADPFPARQRSRLKLLPFIPVVHGFGALTTFMLAVLAAIARY
Ga0187812_103151513300017821Freshwater SedimentRRPRLKLLPLIPVVHGFGALTTFMLAVLAAISTLLGAF
Ga0187818_1031465013300017823Freshwater SedimentEMIAGLLADPFPERQRPRIKLAPFVPVVHGFAALATFMLAVLAAISAILGMF
Ga0187820_119545213300017924Freshwater SedimentPRDDIVTDEMIASLLADPFPARRRSRLRLLPFIPVVHGFGALTTFMLAVLAAIAHY
Ga0187824_1025611613300017927Freshwater SedimentPASRRPRLKLAGLVPVAHGCAALITFMFAVLAAIGAR
Ga0187785_1017438223300017947Tropical PeatlandADPGTVTDEMIADLLADPFPASRRPRLTMAGLVPVAHGFAALTTFMLAVLAAISAR
Ga0187823_1020728213300017993Freshwater SedimentSRRPRLKLAGLVPVAHGCAALITFMFAVLAAIGAR
Ga0187823_1030194713300017993Freshwater SedimentAELLADPFPASRRPRLKLAGLVPVAHGFGALTTFMLAVLAAISAR
Ga0187815_1005686013300018001Freshwater SedimentMIASLLADPSPARRRPRLKLLPLIPVVHGFGALTTFMLAVLAAISMLLGAF
Ga0187788_1023838113300018032Tropical PeatlandMIARLLADPFPASRRPRLKMAGLVPVAHGFAALTTFMLAVLAAISAR
Ga0187766_1055444613300018058Tropical PeatlandAQAAVAEATSASEDGTVTDEMIARLLTDPFPASRRPRLRLAGLIPVAHGFGALTTFMLAVLAAIGAR
Ga0187765_1049390123300018060Tropical PeatlandIASLLAEPFPDRRPRLKLVPLIPVAHGFAALTTFMLAVLAAIRPY
Ga0187765_1094898113300018060Tropical PeatlandPFPASRRPRLKLVPLIPVAHGFGALTTFMFAVMAAISTRLGMFRSQ
Ga0187772_1074277813300018085Tropical PeatlandEMIAGLLADPFPERQRPRIKLAPFVPVAHGFAALATFMLAVLAAISAILGMY
Ga0187769_1099700313300018086Tropical PeatlandRVTDEMIAGLLADPFPERQRPRIKLAPFVPVAHGFAALATFMLAVLAAISAILGMFRYQ
Ga0210407_1066477023300020579SoilADPFPASRRPRLKLAGLVPVAHGCAALITFMFAVLAAIGAR
Ga0210403_1051892213300020580SoilASRRPRLKLAGLVPVAHGCAALITFMFAVLAAIGAR
Ga0210399_1072964023300020581SoilDRSPREDTVTDEMIAELLANPFPGSRRPRLKLAGLIPVAHGFAALTTFMLAVLAAIGAR
Ga0210404_1015949913300021088SoilAVPEAMPLAEDGTVTDKMIADLLADPFPASRRPRLKLAGLVPVAHGCAALTTFMLAVLAAIGAR
Ga0210406_1100673313300021168SoilPFPASRRPRLKLAGLVPVAHGCAALTTFMLAVLAAIGAR
Ga0210408_1142329723300021178SoilGAPAPADGDTFTDEMIAELLADPVPASRRPRLKLVPLIPVAHGFAALTTFMLAVLAAISA
Ga0210388_1017727933300021181SoilARHRPRLKLVPLIPVVHGFGALTTFMLAVFAAISGRLAGD
Ga0210388_1019912613300021181SoilADPFPSRRRPRLKLVPLIPVVHGFAALTTFMLAVLTAVSARLGTFRSQ
Ga0213873_1008601523300021358RhizosphereFTVTDEMIASLLAEPFPARRRPRLKLVLLIPVAHGFAALATFMLAVLAAISGRLGIFPAQ
Ga0210385_1056933723300021402SoilIASLLDDPFPARHRPRLKLVPLIPVVHGFGALTTFMLAVFAAISGRLAGD
Ga0210385_1108192013300021402SoilASLLADPFPSRRRPRLKLVPLIPVVHGFAALTTFMLAVLTAVSARLGTFRSQ
Ga0210397_1035574413300021403SoilLADPFPASRRPRLKLAGLVPVAHGCAALTTFMLAVLAAIGAR
Ga0210394_1049958313300021420SoilVPPAAAAAPEAPPPADAGTVTDEMIASLLADPFPASRRPRVKLVPLIPVAHGFAALTTFMLAVLAAISAR
Ga0210384_1030496233300021432SoilAPEAPPPADAGTVTDEMIASLLADPFPASRRPRVKLVPLIPVAHGFAALTTFMLAVLAAISAR
Ga0210392_1082340223300021475SoilIAELLADPVPASRRPQLKLVPLIPVAHGFAALTTFMLAVLAAISAR
Ga0210409_1030364213300021559SoilPDPASRRPRLKLVPLIPVAHGFAALTTFMLAVLAAISAR
Ga0242675_103322513300022718SoilEMIASMLDDPFPARHRPRPKLGPLIPVVHGFGALTTFMLAVFAAIGGRLACY
Ga0207692_1070960423300025898Corn, Switchgrass And Miscanthus RhizosphereGSRRPRLKLAGLVPVAHGFAALTTFMFAVLAAIGAR
Ga0209626_103317013300027684Forest SoilDPFPASRRPRLKLAGLVPVAHGCAALITFMFAVLAAIGAR
Ga0209166_1031746023300027857Surface SoilGAAPAATPAATPPADSFTVTDEMIASFLAEPSPARRPRFKLVPLIPVIHGFGALTTFMLAVLAAIGARLGMFRTQ
Ga0209283_1091869323300027875Vadose Zone SoilPSPARRPRLTLVPLIPVIHGFGALTTFMLAVLAAISARLGMFRAQ
Ga0302220_1015781423300028742PalsaAVTVTDEMIARLLADPFPVRRRPRLRLEPVIPVGHGFAALATFMLAMLAAIAAR
Ga0170824_12530002713300031231Forest SoilPAPPPPAAVAGAPAPADEGTITDEMIAELLADPVPASRRPRLKLVPLIPVAHGFAALTTFMLAVLAAISAR
Ga0318516_1005940413300031543SoilAPADAGTVTDEMIASLLADPFPAPRRPGLKMAGLVPVAHGFAALTTFMLAVLAAISAR
Ga0318573_1020530613300031564SoilIASLLADPFPASRRPRLKLAGLIPVVHGFGALTTFMLAVLAAIAAR
Ga0318515_1028664623300031572SoilPSATPAADPGTVTDEMIADLLADPFPASRRPRLTMAGLVPVAHGFAALTTFMLAVFAAISAR
Ga0318542_1024523723300031668SoilMDGTVTDEMIAELLADPFPASRRPRLKLAGLVPVAHGFAALTTFMLAVLAAISAR
Ga0318574_1046163323300031680SoilDEMIASLLADPFPASRRPRLKLAGLIPVVHGFGALTTFMLAVLAAIAAR
Ga0318572_1001200513300031681SoilTWSARRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0318572_1049831123300031681SoilIPEATSAAEDGTITDEMIASLLADPFPASRRPRLKLAGLIPVAHGFGALTTFMLAVLAAIAAR
Ga0318493_1058206323300031723SoilPAVAPAVAPSATPAADPGTVTDEMIADLLADPFPASRRPRLTMAGLVPVAHGFAALTTFMLAVFAAISAR
Ga0318500_1035632023300031724SoilVAAPAVRLSPDPSAAPPADAFSVTDEMIADLLADPGPASRRPQLRLLPLIPVVHGFGALTTFMLAVLAAIGARLREYY
Ga0318500_1037269813300031724SoilVAETPAVAPGVTPAVDPGTVTDDMIADLLADPFPASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0306918_1021803533300031744SoilPAADPGTVTDEMIADLLADPFPAARRPRLKLTGLVPVAHGLGALITFMFAVLAAIGAR
Ga0318492_1027819413300031748SoilTDEMIASLLADPFPASRRPRLKLAGLIPVVHGFGALTTFMLAVLAAIAAR
Ga0307477_1054241523300031753Hardwood Forest SoilLAAVPEATPPAEDGTVTDKMIADLLADPFPASRRPRLKLAGLVPVAHGCAALITFMFAVLAAIGAR
Ga0318526_1003710033300031769SoilPPPATTAETPAPADAGTVTDEMIASLLADPFPAPRRPGLKMAGLVPVAHGFAALTTFMLAVLAAISAR
Ga0318526_1007062023300031769SoilMIASFLAEPSAARRPRFKLVPLIPVIHGFGALATFMLAVLAAISARLGIFRIQ
Ga0318526_1020920623300031769SoilEMIADLLADPFPASRRPRLKLTGLVPVAHGLGALITFMCAVLAAIGAR
Ga0318566_1051042023300031779SoilDEMIADLLADPFPATRRPRLKLTGLVPVAHGLGALITFMFAVLAAIGAR
Ga0318565_1024705823300031799SoilADPFPASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0318565_1046588113300031799SoilAELLADPFPASRRPRLKLAGLVPVAHGFAALTTFMLAVLAAISAR
Ga0318568_1063338923300031819SoilMIASLLADPFPASRRPRLKLAGLIPVVHGFGALTTFMLAVLAAIAAR
Ga0318568_1095003813300031819SoilTDEMIASLLAEPFPDRRPRLKLGPLIPVAHGFAALTTFMLAVLAAIRPLLGIFLYQ
Ga0318567_1001985913300031821SoilPRDNIVTDEMIAGLMADPFPASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0318564_1008220313300031831SoilREDTGTITDEMIASLLADPFPASRRPRLKLAGLIPVVHGFGALTTFMLAVLAAIAAR
Ga0318499_1013126513300031832SoilSPRDNIVTDEMIAGLMADPFPASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0318522_1022806313300031894SoilASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0310913_1085865723300031945SoilPFPAARRPRLKLTGLVPVAHGLGALITFMFAVLAAIGAR
Ga0310913_1100856023300031945SoilDNIVTDEMIAGLLADPFPASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0310909_1024404023300031947SoilMIAGLLADPFPASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0306926_1258314223300031954SoilMIAELLADPFPASRRPRLKLAGLVPVAHGFAALTTFMLAVLAAISAR
Ga0306922_1088321523300032001SoilDEMIADLLADPFPAARRPRLKLTGLVPVAHGLGALITFMFAVLAAIGAR
Ga0306922_1135593213300032001SoilSRRPRLKLAGLIPVVHGFGALTTFMLAVLAAIAAR
Ga0318562_1051570313300032008SoilMIADLLADPFPATRRPRLKLTGLVPVAHGLGALITFMFAVLAAIGAR
Ga0318563_1031310513300032009SoilTDEMIAGLLADPFPASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0318507_1046682423300032025SoilPDPSAAPPADAFSVTDEMIADLLADPGPASRRPQLRLLPLIPVVHGFGALTTFMLAVLAAIGARLREHY
Ga0318506_1045002123300032052SoilADPFPASRRPRLKLTGLVPVAHGLGALITFMFAVLAAIGAR
Ga0318506_1047929723300032052SoilPRDNIVTDEMIAGLLADPFPASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0318570_1018746713300032054SoilVTDEMIAGLLADPFPASRRPRLRLVPLIPVAHGFGALTTFMLAVLAAISAR
Ga0318513_1010794333300032065SoilAPAVTPQATPAADPGTVTDEMIADLLADPFPAARRPRLKLTGLVPVAHGLGALITFMFAVLAAIGAR
Ga0318514_1037687513300032066SoilPDPSAAPPADAFSVTDEMIADLLADPGPASRRPQLRLLPLIPVVHGFGALTTFMLAVLAAIGARLREYY
Ga0318524_1009761033300032067SoilAFTVTDEMIASFLAEPSAARRPRFKLVPLIPVIHGFGALATFMLAVLAAISARLGIFRIQ
Ga0306924_1117376313300032076SoilAAPAVTPQATPAADPGTVTDEMIADLLADPFPASRRPRLKLTGLVPVAHGLGALITFMCAVLAAIGAR
Ga0318525_1011330113300032089SoilADAFTVTDEMIASFLAEPSAARRPRFKLVPLIPVIHGFGALATFMLAVLAAISARLGIFRIQ
Ga0318525_1015991023300032089SoilGSLPPDHAVTDEMIAGLLADPFPERPRPRIKLAPFVPVAHGFAALATFMLAALAAISAILGMF
Ga0318540_1023499723300032094SoilPQATPAADPGTVTDEMIADLLADPFPATRRPRLKLTGLVPVAHGLGALITFMFAVLAAIGAR
Ga0306920_10095119333300032261SoilADPGPASRRPQLRLLPLIPVVHGFGALTTFMLAVLAAIGARLREYY
Ga0335085_1043226013300032770SoilMIADLLADPFPASRRPRLKLLPLIPVVHGFGALTTFMLAVMAAISARLRVHD
Ga0335082_1084020713300032782SoilTENTVTDEMIAALLADPFPASRRPRLKLVPLIPVVHGFGALTTFMFAVLAAIMARLGIF
Ga0335080_1030238713300032828SoilSEGTFTDEMIAALLADPFPASRRPRLKLVPLIPVVHGFGALITFMFAVLAAISARLRVHA
Ga0335081_1023116343300032892SoilAPPATPAAEPGTVTDEMIADLLADPFPASRRPRLKMAGLVPVAHGFAALTTFMLAVLAAISAR
Ga0335083_1012639533300032954SoilVTDEMIADLLADPFPVSRRPRLKMAGLVPVAHGFGALTTFMLAVLAAISAR
Ga0335073_1079793513300033134SoilTVTDEMIADLLADPFPASRRPRLKMAGLVPIAHGFGALTTFMLAVLAAISAR
Ga0335077_1071460323300033158SoilGQGGPGGWVPPGAGGSPVGSPPGENTVTDEMIAALLADPFPASRRPRLKLLPLIPVVHGFGALTTFMFAVLAAISARLRVHD
Ga0310914_1089827623300033289SoilVTDDMIADLLADPFPASRRPRLKLAGLIPVAHGFGALTTFMLAVLAAIAAR
Ga0314862_0188160_302_5113300033803PeatlandAPAPATISKATSAAKDGAVTDEMIASLLADPFPASRRPRLKLAGLIPVAHGFGALTTFMLAVLAAIAAR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.