Metagenome / Metatranscriptome Family F051173

Basic Information
Family ID	F051173
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	48 residues
Representative Sequence	MARIGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE
Number of Associated Samples	133
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.42 %
% of genes near scaffold ends (potentially truncated)	84.03 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	129
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Most Common Taxonomy
Group	Bacteria (87.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.806 % of family members)
Environment Ontology (ENVO)	Unclassified (34.722 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.528 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 2.82% Coil/Unstructured: 97.18%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF04909	Amidohydro_2	8.33
PF02780	Transketolase_C	4.86
PF00248	Aldo_ket_red	2.78
PF00892	EamA	2.78
PF13366	PDDEXK_3	2.08
PF12680	SnoaL_2	2.08
PF13469	Sulfotransfer_3	2.08
PF13343	SBP_bac_6	1.39
PF09084	NMT1	0.69
PF07883	Cupin_2	0.69
PF02515	CoA_transf_3	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.69
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.69
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	53.47 %
Unclassified	root	N/A	12.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.47 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.69 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	53.47 %
Unclassified	root	N/A	12.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.47 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.08 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	53.47 %
Unclassified	root	N/A	12.50 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.08 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	53.47 %
Unclassified	root	N/A	12.50 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.08 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	53.47 %
Unclassified	root	N/A	12.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.08 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	53.47 %
Unclassified	root	N/A	12.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.08 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	53.47 %
Unclassified	root	N/A	12.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.08 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459012\|GOYVCMS02GO5B6	Not Available	546	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104191518	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	545	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105458772	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300000559\|F14TC_103772878	Not Available	586	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1043481	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	633	Open in IMG/M
3300000890\|JGI11643J12802_10953021	Not Available	1030	Open in IMG/M
3300000890\|JGI11643J12802_11374091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300000955\|JGI1027J12803_102159963	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300004268\|Ga0066398_10049893	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300005178\|Ga0066688_10898064	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	547	Open in IMG/M
3300005330\|Ga0070690_100695944	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	780	Open in IMG/M
3300005331\|Ga0070670_101409263	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	639	Open in IMG/M
3300005354\|Ga0070675_100938703	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	793	Open in IMG/M
3300005441\|Ga0070700_100971218	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	696	Open in IMG/M
3300005455\|Ga0070663_101109631	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	692	Open in IMG/M
3300005466\|Ga0070685_11057201	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	611	Open in IMG/M
3300005536\|Ga0070697_101785286	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	550	Open in IMG/M
3300005544\|Ga0070686_100442358	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	997	Open in IMG/M
3300005545\|Ga0070695_101343250	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	591	Open in IMG/M
3300005546\|Ga0070696_100163313	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005557\|Ga0066704_11056481	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	501	Open in IMG/M
3300005563\|Ga0068855_100031166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6369	Open in IMG/M
3300005564\|Ga0070664_100000638	All Organisms → cellular organisms → Bacteria	26843	Open in IMG/M
3300005564\|Ga0070664_100604064	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1017	Open in IMG/M
3300005577\|Ga0068857_100959634	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	822	Open in IMG/M
3300005617\|Ga0068859_100471399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1351	Open in IMG/M
3300005764\|Ga0066903_106156001	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005843\|Ga0068860_102242648	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	567	Open in IMG/M
3300005879\|Ga0075295_1030581	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005983\|Ga0081540_1143019	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	957	Open in IMG/M
3300006049\|Ga0075417_10018372	All Organisms → cellular organisms → Bacteria	2749	Open in IMG/M
3300006358\|Ga0068871_100591733	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1008	Open in IMG/M
3300006797\|Ga0066659_11331030	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	599	Open in IMG/M
3300006844\|Ga0075428_102392009	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	542	Open in IMG/M
3300006845\|Ga0075421_102173870	Not Available	586	Open in IMG/M
3300006847\|Ga0075431_101275403	Not Available	696	Open in IMG/M
3300006852\|Ga0075433_11753831	Not Available	534	Open in IMG/M
3300006871\|Ga0075434_100435955	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300006871\|Ga0075434_100477720	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1267	Open in IMG/M
3300006894\|Ga0079215_10090963	Not Available	1316	Open in IMG/M
3300006894\|Ga0079215_10560948	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300006904\|Ga0075424_100547273	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300006914\|Ga0075436_100295563	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300007076\|Ga0075435_101538531	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	583	Open in IMG/M
3300009078\|Ga0105106_11372618	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	501	Open in IMG/M
3300009091\|Ga0102851_12625787	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	577	Open in IMG/M
3300009100\|Ga0075418_10070541	All Organisms → cellular organisms → Bacteria	3723	Open in IMG/M
3300009147\|Ga0114129_10784886	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1217	Open in IMG/M
3300009156\|Ga0111538_10346537	Not Available	1880	Open in IMG/M
3300009162\|Ga0075423_11325210	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	770	Open in IMG/M
3300009162\|Ga0075423_12838029	Not Available	531	Open in IMG/M
3300009166\|Ga0105100_10284502	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	991	Open in IMG/M
3300009811\|Ga0105084_1122698	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	503	Open in IMG/M
3300009815\|Ga0105070_1010806	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300010043\|Ga0126380_10205060	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300010047\|Ga0126382_10420396	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300010358\|Ga0126370_12278470	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	535	Open in IMG/M
3300010360\|Ga0126372_10815932	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	926	Open in IMG/M
3300010361\|Ga0126378_12451075	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010362\|Ga0126377_10265384	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300010366\|Ga0126379_10603012	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1184	Open in IMG/M
3300010376\|Ga0126381_100480937	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300010376\|Ga0126381_100723300	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300010868\|Ga0124844_1157122	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	856	Open in IMG/M
3300011406\|Ga0137454_1052310	Not Available	656	Open in IMG/M
3300011429\|Ga0137455_1022984	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300011429\|Ga0137455_1253681	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	518	Open in IMG/M
3300011439\|Ga0137432_1084914	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300012096\|Ga0137389_11553591	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	558	Open in IMG/M
3300012207\|Ga0137381_10751961	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	846	Open in IMG/M
3300012209\|Ga0137379_10382661	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300012210\|Ga0137378_11802734	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	516	Open in IMG/M
3300012353\|Ga0137367_10496504	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300012355\|Ga0137369_10184218	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1629	Open in IMG/M
3300012355\|Ga0137369_11069952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300012358\|Ga0137368_10665633	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	657	Open in IMG/M
3300012469\|Ga0150984_104496135	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012506\|Ga0157324_1006018	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012532\|Ga0137373_10398441	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300012582\|Ga0137358_10076815	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300012900\|Ga0157292_10338624	Not Available	552	Open in IMG/M
3300012927\|Ga0137416_10922746	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	777	Open in IMG/M
3300012930\|Ga0137407_10008096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	7287	Open in IMG/M
3300012948\|Ga0126375_11062594	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012971\|Ga0126369_10834660	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300012971\|Ga0126369_11571354	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	747	Open in IMG/M
3300014256\|Ga0075318_1133654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300014301\|Ga0075323_1073150	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	702	Open in IMG/M
3300014326\|Ga0157380_12435672	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	589	Open in IMG/M
3300014876\|Ga0180064_1004418	All Organisms → cellular organisms → Bacteria	2892	Open in IMG/M
3300015053\|Ga0137405_1378799	All Organisms → cellular organisms → Bacteria	2498	Open in IMG/M
3300015374\|Ga0132255_101342919	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1079	Open in IMG/M
3300015374\|Ga0132255_101560563	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1000	Open in IMG/M
3300016294\|Ga0182041_10817111	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	834	Open in IMG/M
3300016445\|Ga0182038_11609704	Not Available	584	Open in IMG/M
3300017656\|Ga0134112_10009361	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300017927\|Ga0187824_10359848	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	526	Open in IMG/M
3300017939\|Ga0187775_10103759	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	959	Open in IMG/M
3300018031\|Ga0184634_10523379	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	527	Open in IMG/M
3300018072\|Ga0184635_10138335	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	971	Open in IMG/M
3300018075\|Ga0184632_10420132	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	559	Open in IMG/M
3300018078\|Ga0184612_10006032	All Organisms → cellular organisms → Bacteria	6083	Open in IMG/M
3300018089\|Ga0187774_10871978	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	615	Open in IMG/M
3300018422\|Ga0190265_13586745	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	517	Open in IMG/M
3300018429\|Ga0190272_11564856	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	674	Open in IMG/M
3300018469\|Ga0190270_10874959	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	913	Open in IMG/M
3300019263\|Ga0184647_1005215	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	533	Open in IMG/M
3300019377\|Ga0190264_11899320	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	541	Open in IMG/M
3300020010\|Ga0193749_1046329	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	837	Open in IMG/M
3300020060\|Ga0193717_1121326	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	802	Open in IMG/M
3300021078\|Ga0210381_10266734	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300021560\|Ga0126371_11712883	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	752	Open in IMG/M
3300022309\|Ga0224510_10532351	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	697	Open in IMG/M
3300022534\|Ga0224452_1162950	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	686	Open in IMG/M
3300025899\|Ga0207642_10568306	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	702	Open in IMG/M
3300025911\|Ga0207654_10582834	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	797	Open in IMG/M
3300025912\|Ga0207707_10457735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1091	Open in IMG/M
3300025914\|Ga0207671_10427223	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1054	Open in IMG/M
3300025917\|Ga0207660_11046845	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300025923\|Ga0207681_10461815	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1034	Open in IMG/M
3300025940\|Ga0207691_10885892	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	748	Open in IMG/M
3300025946\|Ga0210126_101947	Not Available	1630	Open in IMG/M
3300026121\|Ga0207683_10768921	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	894	Open in IMG/M
3300027006\|Ga0209896_1010959	All Organisms → cellular organisms → Bacteria → Proteobacteria	978	Open in IMG/M
3300027646\|Ga0209466_1001036	All Organisms → cellular organisms → Bacteria	5590	Open in IMG/M
3300027665\|Ga0209983_1032610	Not Available	1113	Open in IMG/M
3300027748\|Ga0209689_1226923	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	794	Open in IMG/M
3300027815\|Ga0209726_10162980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1225	Open in IMG/M
3300027873\|Ga0209814_10039733	Not Available	1955	Open in IMG/M
3300027886\|Ga0209486_11083661	Not Available	543	Open in IMG/M
3300027909\|Ga0209382_11720184	Not Available	614	Open in IMG/M
3300028536\|Ga0137415_10654888	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	862	Open in IMG/M
3300030620\|Ga0302046_10279339	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1373	Open in IMG/M
3300031720\|Ga0307469_11458265	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	654	Open in IMG/M
3300031945\|Ga0310913_10946379	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	605	Open in IMG/M
3300031946\|Ga0310910_10720451	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	788	Open in IMG/M
3300031947\|Ga0310909_10282401	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300031962\|Ga0307479_10164607	All Organisms → cellular organisms → Bacteria	2178	Open in IMG/M
3300032012\|Ga0310902_11330864	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	509	Open in IMG/M
3300032075\|Ga0310890_11495810	Not Available	556	Open in IMG/M
3300033412\|Ga0310810_10936567	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	753	Open in IMG/M
3300033413\|Ga0316603_11543076	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	630	Open in IMG/M
3300033419\|Ga0316601_102042837	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	578	Open in IMG/M
3300033434\|Ga0316613_10609445	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	746	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.22%
Host-Associated	Host-Associated	27.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.03%
Plants	Host-Associated → Plants	27.78%
Aquatic	Environmental → Aquatic	13.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.64%
Sediment	Environmental → Aquatic → Sediment	6.94%
Freshwater	Environmental → Aquatic → Freshwater	4.86%
Marine	Environmental → Aquatic → Marine	1.39%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.89%
Loam	Environmental → Terrestrial → Soil → Loam	9.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.78%
Sand	Environmental → Terrestrial → Soil → Sand	2.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.69%
Sediment	Environmental → Aquatic → Marine → Sediment	0.69%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.08%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.08%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.08%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.39%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.39%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.39%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.39%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.39%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.39%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005879	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014256	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D2	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025946	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N56_07562450	2170459012	Grass Soil	DKADQRINPDGSAIPGRTHEQGAAKPVLIEGAFFE
INPhiseqgaiiFebDRAFT_1041915182	3300000364	Soil	SGNEPLVMARVGAGLDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
INPhiseqgaiiFebDRAFT_1054587723	3300000364	Soil	PDKSDMRLNPDGTAIPGRTQEQGAAKPVLIEGAFFE*
F14TC_1037728782	3300000559	Soil	SGSDSLVMARIGAGSDKADQRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE*
AP72_2010_repI_A100DRAFT_10434811	3300000837	Forest Soil	CYYQFRNSGETSLVMARIGAGPDKSDMGLNPDATPIPGRAHEQGAAKPF*
JGI11643J12802_109530213	3300000890	Soil	LVMTRIGAGPDKQDQRLNPDGTPIPGRTHEQGAAKPVLIEGAFFE*
JGI11643J12802_113740911	3300000890	Soil	PLVMARIGAGSDKADQRLNPDGSAIPGRTHEQGAARPVLIEGAFFQ*
JGI1027J12803_1021599633	3300000955	Soil	KSDMRLNPDGTPIPGRTHEQGAAKPVLIEGAFFE*
Ga0066398_100498931	3300004268	Tropical Forest Soil	MARIGAGPDKSDMRLNPDGTPVPGRAHEQGAAKPVLIEGSFFE*
Ga0066688_108980641	3300005178	Soil	CNSGNTSLVMARIGAGLDKHDMRLNPDGTPIPGRTQEQGAAKPVLIEGAFFE*
Ga0070690_1006959443	3300005330	Switchgrass Rhizosphere	TDPLVMARIGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGVFFE*
Ga0070670_1014092632	3300005331	Switchgrass Rhizosphere	YYQFCNSGDDPLVMARIGAGPDKADQRLNPDGTAVPGRTHEQGAAKPVLIEGAFFE*
Ga0070675_1009387031	3300005354	Miscanthus Rhizosphere	PAGCYYQFCNSGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQNAAKPVLIENAFFE
Ga0070700_1009712182	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	CYYQFCNSGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE*
Ga0070663_1011096312	3300005455	Corn Rhizosphere	CYYQFCNSGTDPLVMARIGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGVFFE*
Ga0070685_110572012	3300005466	Switchgrass Rhizosphere	CNSGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQNAAKPVLIENAFFE*
Ga0070697_1017852862	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MARVGAGLDKANQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0070686_1004423583	3300005544	Switchgrass Rhizosphere	SGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE*
Ga0070695_1013432502	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	IGAGSDKADQRLNPDGSAIPGRAHEQGAAKPVLIEGAFFE*
Ga0070696_1001633131	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AGCYYQFCNSGDDPLVMARIGAGPDKADQRLNPDGTAVPGRTHEQGAAKPVLIEGAFFE*
Ga0066704_110564813	3300005557	Soil	SGDTSLVMARIGAGPDKSDMRLNPDGTAIPGRTQEQGAAKPVLIEGAFFE*
Ga0068855_1000311661	3300005563	Corn Rhizosphere	PAGCYYQFCNSGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE
Ga0070664_10000063824	3300005564	Corn Rhizosphere	GQDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE*
Ga0070664_1006040641	3300005564	Corn Rhizosphere	PLVMARIGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIGGTFFE*
Ga0068857_1009596341	3300005577	Corn Rhizosphere	QDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE*
Ga0068859_1004713991	3300005617	Switchgrass Rhizosphere	GCYYQFCNSGEDPLVMARIGAGPDKADQRLNPDGTAVPGRTHEQGAAKPVLIEGAFFE*
Ga0066903_1061560013	3300005764	Tropical Forest Soil	VLPAGCYYQFRNSGETSLVTARIGAGPDKSDMRLNPDATPIPGRARARRHETVLIEGALFE*
Ga0068860_1022426482	3300005843	Switchgrass Rhizosphere	SGDDPLVMARIGAGPDKADQRLNPDGTAVPGRTHEQGAAKPVLIEGAFFE*
Ga0075295_10305811	3300005879	Rice Paddy Soil	LVMARIGAGSDKADQRLNPDGSAIPGRTHEQRAAKPVLIEGAFFQ*
Ga0081540_11430192	3300005983	Tabebuia Heterophylla Rhizosphere	MARIGAGPDKSDMRLNPDATPIPGRAHEQGAAKPVLIEGAFFE*
Ga0075417_100183722	3300006049	Populus Rhizosphere	MTRVGVGPDNADQRINPDSTAIPDRTHEQGAAKPVLIEGAFFE*
Ga0068871_1005917331	3300006358	Miscanthus Rhizosphere	TDPLVMARIGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0066659_113310302	3300006797	Soil	SGTEPLVMARIGAGSDKADHRLNPDGSAIPGRTHEQGAAKPVLIEGAFYE*
Ga0075428_1023920091	3300006844	Populus Rhizosphere	LSVLQFGTEPLVMARVGAGLDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0075421_1021738701	3300006845	Populus Rhizosphere	DKADQRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE*
Ga0075431_1012754031	3300006847	Populus Rhizosphere	NSGDTPLVMTRIGPDPDKHDQRLNPDDTPIPGRTHEQGAAKPVLIEGAFFE*
Ga0075433_117538312	3300006852	Populus Rhizosphere	MARIGAGSDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0075434_1004359553	3300006871	Populus Rhizosphere	AGKNNAIVLPSGCYYQFCNSGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0075434_1004777203	3300006871	Populus Rhizosphere	VVLPAGCYYQFCNSGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE*
Ga0079215_100909631	3300006894	Agricultural Soil	QFCNSGSDPLVMARIGAGSDKADQRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE*
Ga0079215_105609483	3300006894	Agricultural Soil	MTRIGAGPDKQDQRLNPDGTPIPGRTHEQGAAKPVLIEGAFFE*
Ga0075424_1005472732	3300006904	Populus Rhizosphere	MTRVGVGPDNADQRINPDSTAIPDRTHEQGAAKPVLIE
Ga0075436_1002955633	3300006914	Populus Rhizosphere	QFCNSGETPLVMARIGAGSDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0075435_1015385311	3300007076	Populus Rhizosphere	GETPLVMARIGAGSDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0105106_113726182	3300009078	Freshwater Sediment	NSGQTPLVMARIGAGQDKADQRLNPDGSAIPGRVHEQGAAKPKLIEGAFFE*
Ga0102851_126257871	3300009091	Freshwater Wetlands	TPLVMARIGAGQDKADQRLNPDGSAIPGRASEQGAAKPKLIEGAFFE*
Ga0075418_100705415	3300009100	Populus Rhizosphere	MARVGAGLDKADQRLNPDGTTIPGRTHEQGAAKPVLIEGAFFE*
Ga0114129_107848861	3300009147	Populus Rhizosphere	MTRVGVGPDNADQRINPDSTAIPDRTHEEGAAKPVLIEGAFFE*
Ga0111538_103465371	3300009156	Populus Rhizosphere	RAGKNNAIVLPSGCYYQFCNSGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0075423_113252101	3300009162	Populus Rhizosphere	AGCYYQFCNSGETPLVMARIGAGSDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0075423_128380292	3300009162	Populus Rhizosphere	SGTEPLVMARVGAGPDKADQRLNPDGTAIPGRTHEQNAAKPVLIEGAFFE*
Ga0105100_102845022	3300009166	Freshwater Sediment	RIGAGSDKADQRLNPDGSAIPGRAHEHGAAKPVLIEGAFFE*
Ga0105084_11226981	3300009811	Groundwater Sand	GCYYQFCNSGETPLVMARIGAGPDKSDMRLNPDGTPIPGRTHEQGAAKPVLIEGAFFE*
Ga0105070_10108064	3300009815	Groundwater Sand	YQFCNSGDTPLVMARIGAGPDKSDMRLNPDGTPIPGRTHEQGAAKPVLIEGAFFE*
Ga0126380_102050602	3300010043	Tropical Forest Soil	VLPAGCYYQFRNSGETSLVMARIGAGPDKSDMRLNPDATPIPGRAHEQGAAKPVLLEGAFFE*
Ga0126382_104203961	3300010047	Tropical Forest Soil	VLPAGCYYQFRNSGETSLVMARIGAGPDKSDMRLNPDATPIPGRAHEQGAAKPVLIEGAFFE*
Ga0126370_122784702	3300010358	Tropical Forest Soil	AGCYYQFCNSGDAPLVMARIGAGPDKSDMRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0126372_108159322	3300010360	Tropical Forest Soil	YQFCNSGTEPLVMARIGAGQDKADHRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0126378_124510751	3300010361	Tropical Forest Soil	MARIDAGPDKSDMRLNPDGTPVPGRAHEQGAAKPVLIEGSFFE*
Ga0126377_102653841	3300010362	Tropical Forest Soil	MARIGAGPDKSDMRLNPDGTSVPGRAHEQGAAKPVLIEGSYFE*
Ga0126379_106030121	3300010366	Tropical Forest Soil	KANKYNAVVLPAGCYYQFCNSGDTPLVMARIGAGQDKSEMRLNPDGIPIPGRAHEQGAAKPVLIEEAFFE*
Ga0126381_1004809371	3300010376	Tropical Forest Soil	DKSEMRLNPDGIPIPGRAHEQGAAKPVLIEEAFFE*
Ga0126381_1007233001	3300010376	Tropical Forest Soil	MARIGAGPDKSDMRLNPDATPIPGRAHEQGAAKPVLLEGAFFE*
Ga0124844_11571222	3300010868	Tropical Forest Soil	MARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0137454_10523102	3300011406	Soil	VMARIGAGPDKADQRLNPDGTAIPGRTQEQGAAQPRLIEGAFFE*
Ga0137455_10229843	3300011429	Soil	CNSGQTPLVMARIGAGSDKADQRLNPDGSAIPGRAQEHGAAKPVLIEGVFFE*
Ga0137455_12536812	3300011429	Soil	SGQTPLVMARIGAGQDKADQRLNPDGSAVPGRTSERGAAKPKLIEGAFFA*
Ga0137432_10849141	3300011439	Soil	STPLVMARIGAGPDKSDMRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE*
Ga0137389_115535911	3300012096	Vadose Zone Soil	AGCYYQFCNSGDTSLVMARIGAGPDKNDMRLNPDGTPIPGRTHEQGAAKPVLIENAFFE*
Ga0137381_107519612	3300012207	Vadose Zone Soil	ARIGAGSDKADHRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE*
Ga0137379_103826612	3300012209	Vadose Zone Soil	MARIGAGLDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0137378_118027342	3300012210	Vadose Zone Soil	RIGAGLDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0137367_104965041	3300012353	Vadose Zone Soil	TPLVMARIGAGPDKSDMRLNPDGTPIPGRTHEQGAAKPVMIEGAFFE*
Ga0137369_101842181	3300012355	Vadose Zone Soil	SDPLVMACIGAGLDKADQRLNPDGMAIFGRTYEQGAVKPVLIEKTFFE*
Ga0137369_110699521	3300012355	Vadose Zone Soil	QFCNSGSEPLVMARIGAGTDKADQRLNPDGTAIPGRTHEQGAARPVLIEGAFFE*
Ga0137368_106656332	3300012358	Vadose Zone Soil	ARIGAGLDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0150984_1044961351	3300012469	Avena Fatua Rhizosphere	PDKADQRLNPDGTAIPGRTHEQGAAKPALIEGAFFE*
Ga0157324_10060181	3300012506	Arabidopsis Rhizosphere	MARIGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0137373_103984411	3300012532	Vadose Zone Soil	MARIGAGSDKQDMRLNPDGTPIPGRTHEQGAAKAVLIEGAFFE*
Ga0137358_100768154	3300012582	Vadose Zone Soil	CYYQFCNSGDTSLVMARIGAGPDKSDMRLNPDGTAIPGRTQEQGAAKPVLIEGAFFE*
Ga0157292_103386241	3300012900	Soil	TPLVLTRIGAGPDKQDPRLNPDGTPIPGRTHEQGAAKPVLIEGAFFE*
Ga0137416_109227461	3300012927	Vadose Zone Soil	RIGAGSDKADHRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE*
Ga0137407_100080969	3300012930	Vadose Zone Soil	MARVGAGLDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0126375_110625941	3300012948	Tropical Forest Soil	VLPAGCYYQFRNSGETSLVMARIGAGPDKSDMRLNPDATPIPGRAHEQGAAKPF*
Ga0126369_108346603	3300012971	Tropical Forest Soil	MARIGAGPDKSDMRLNPDGTPVPGRAHEQGAAKPVLIEGAFFE*
Ga0126369_115713541	3300012971	Tropical Forest Soil	TEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE*
Ga0075318_11336542	3300014256	Natural And Restored Wetlands	CNSGSDPLVLARIGAGSDKADQRLNPDGSAIPGRTHEQGAARPVLIEGAFFQ*
Ga0075323_10731502	3300014301	Natural And Restored Wetlands	FCNSGTDSLVMARIGAGSDKVDQRLNPDGSAIPGRAHEQGAAKPVLIEGAFFE*
Ga0157380_124356721	3300014326	Switchgrass Rhizosphere	VMARIGAGSDKADQRLNPDGSAIPGRAQEHGAAKPVLIEGAFFE*
Ga0180064_10044184	3300014876	Soil	GSTPLVMTRIGAGPDKSDMRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE*
Ga0137405_13787991	3300015053	Vadose Zone Soil	QFCNSGDTPLVMARIGAGSDKQDMRLNPDGTPIPGRTHEQGAAKAVLIEGAFFE*
Ga0132255_1013429192	3300015374	Arabidopsis Rhizosphere	QFCNSGTDPLVMARIGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFQ*
Ga0132255_1015605631	3300015374	Arabidopsis Rhizosphere	IGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIGGTFFE*
Ga0182041_108171113	3300016294	Soil	VMARIDAGPYKSDMRLNPDGTAIPGRTQEQGAAKPVLIEGAFFE
Ga0182038_116097041	3300016445	Soil	MARIGAGPDKSDMRLNPDGTAIPGRTQEQGAAKPVLIEGAFFE
Ga0134112_100093611	3300017656	Grasslands Soil	NSGDTPLVMARIGAGSDKQDMRLNPDGTPIPGRTHEQGAAKAVLIEGAFFE
Ga0187824_103598481	3300017927	Freshwater Sediment	TDPLVMARIGAGSDNADQRLNPDGSAIPGRAYEQGAAKPVLIEGAFFE
Ga0187775_101037592	3300017939	Tropical Peatland	LVMARIGAGSDKADQRLNPDGTAIPGRAHEQTAAKPVLIEGAFYE
Ga0184634_105233791	3300018031	Groundwater Sediment	DKADQRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE
Ga0184635_101383351	3300018072	Groundwater Sediment	DKSDMRLNPDGTPVPGRTHEQGAAKPVLIEGAFFE
Ga0184632_104201322	3300018075	Groundwater Sediment	MARIGAGSDKADQRLNPDGSAIPGRTQEQGAAKPLLMEGAFFE
Ga0184612_100060328	3300018078	Groundwater Sediment	VMARIGAGSDKADQRLNPDGSSIPGRTHEQSAAKPVLIEGAFFE
Ga0187774_108719781	3300018089	Tropical Peatland	DKQDMRLNPEGTPIPGRIHEQGAVKPVLIEGAIFE
Ga0190265_135867451	3300018422	Soil	GPDKADQRLNPDGSAVPGRAHEQGVAKPKLIEGAFFE
Ga0190272_115648562	3300018429	Soil	YQFCNSGQTPLVMARIGAGQDKADQRLNADGSAIPGRAHEQGAAKAKLIEGAFFA
Ga0190270_108749591	3300018469	Soil	VMARIGAGSDKADQRLNPDGSAIPGRAQEQGAAKPVLIEGAFFE
Ga0184647_10052152	3300019263	Groundwater Sediment	FCNSGRTPLVMARIGAGSDKADQRLNPDGSAIPGRAQEHGAAKPVLIEGAFFE
Ga0190264_118993201	3300019377	Soil	IGAGQDKADQRLNPDGSAIPGRAHEPNAAKPKLIEGAFFA
Ga0193749_10463291	3300020010	Soil	GTEPLVMARIGAGSDKADHRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE
Ga0193717_11213261	3300020060	Soil	LVMARIGAGPDKADQRLNPDGTAVPGRTHEQGAAKPVLIEGAFFE
Ga0210381_102667341	3300021078	Groundwater Sediment	MARIGAGLDKSDMRLNPDGTPVPGRTHEQGAAKPVLIEGAFFE
Ga0126371_117128831	3300021560	Tropical Forest Soil	QFRNSGETPLVMTRIGAGPDKSDMRLNPDGTPVPGRAHEQGAAKPVLIEGAFFE
Ga0224510_105323511	3300022309	Sediment	RIGAGEDKADQRLNPDGSAIPGRASEQGATKPKLIEGAYFE
Ga0224452_11629501	3300022534	Groundwater Sediment	GSDPLVMARIGAGLDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE
Ga0207642_105683061	3300025899	Miscanthus Rhizosphere	DKADQRLNPDGTAIPGRTHEQNAAKPVLIENAFFE
Ga0207654_105828341	3300025911	Corn Rhizosphere	DPLVMARIGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE
Ga0207707_104577351	3300025912	Corn Rhizosphere	AVVLSAGCYYQFCNSGSDPLVMARIGAGSDKADQRLNPDGSAIPGRAHEQGAAKPVLIEDAFFE
Ga0207671_104272231	3300025914	Corn Rhizosphere	SGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQNAAKPVLIENAFFE
Ga0207660_110468451	3300025917	Corn Rhizosphere	SGSAPLVMARIGAGSDKADQRLNPDGSAIPGRAHEQGAAKPILIEGAFFE
Ga0207681_104618152	3300025923	Switchgrass Rhizosphere	QFCNSGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE
Ga0207691_108858922	3300025940	Miscanthus Rhizosphere	IGAGPDKADQRLNPDGTAVPGRTHEQGAAKPVLIEGAFFE
Ga0210126_1019471	3300025946	Natural And Restored Wetlands	PLVMARIGAGQDKADQRLNPDGSAIPGRAHEQGAAKPKLIEGAYFE
Ga0207683_107689211	3300026121	Miscanthus Rhizosphere	EPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE
Ga0209896_10109592	3300027006	Groundwater Sand	GCYYQFCNSGDTPLVMARIGAGPDKSDMRLNPDGTPIPGRTHEQGAAKPVLIEGAFFE
Ga0209466_10010368	3300027646	Tropical Forest Soil	MARIGAGPDKSDMRLNPDGTPVPGRAHEQGAAKPVLIEGSFFE
Ga0209983_10326101	3300027665	Arabidopsis Thaliana Rhizosphere	DKADQRLNPDGSAIPGRTHEQGAARPVLIEGAFFQ
Ga0209689_12269231	3300027748	Soil	KHQAVVLPAGCYYQFCNSGDTSLVMARIGAGPDKSDMRLNPDGTAIPGRTQEQGAAKPVLIEGAFFA
Ga0209726_101629803	3300027815	Groundwater	IGAGSDKADQRLNPDGSAIPGRTYEQGAAKPVLIEGAFFE
Ga0209814_100397334	3300027873	Populus Rhizosphere	MTRVGVGPDNADQRINPDSTAIPDRTHEQGAAKPVLIEGAFFE
Ga0209486_110836612	3300027886	Agricultural Soil	GAGPDKQDQRLNPDGTPIPGRTHEQGAAKPVLIEGAFFE
Ga0209382_117201842	3300027909	Populus Rhizosphere	RIGAGSDKADQRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE
Ga0137415_106548881	3300028536	Vadose Zone Soil	LVMTRIGAGSDKADHRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE
Ga0302046_102793392	3300030620	Soil	DPLVMARIGAGSDKADQRLNPDGSAIPGRTHEQGAAKPVLIEGAFFE
Ga0307469_114582651	3300031720	Hardwood Forest Soil	CNSGDAPLVMARIGAGPDKSDMRLNPDGTAIPGRTHEQGAAKAVLIEGAFFE
Ga0310913_109463791	3300031945	Soil	AGCYYQFCNSGTEPLVMARIGAGQDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE
Ga0310910_107204512	3300031946	Soil	LPAGCYYQFCNSDDTPLVMARIGAGPDKSDMRLNPDGTAIPGRTQEQGAAKPVLIEGAFF
Ga0310909_102824011	3300031947	Soil	YYQFCNSDDTPLVMARIGAGPDKSDMRLNPDGTAIPGRTQEQGAAKPVLIEGAFFE
Ga0307479_101646071	3300031962	Hardwood Forest Soil	LVMARIGAGPDKSDMRLNPDGTAIPGRTHEQGAAKPVLIEGAFFE
Ga0310902_113308642	3300032012	Soil	CYYQFCNSGTDPLVMARIGAGPDKADQRLNPDGTAIPGRTHEQGAAKPVLIEGVFFE
Ga0310890_114958102	3300032075	Soil	LVMTRIGAGPDKQDQRLNPDGTPIPGRTHEQGAAKPVLIEGAFFE
Ga0310810_109365671	3300033412	Soil	QDKADQRLNPDGTAIPGRTHEQGAAKPVLIENAFFE
Ga0316603_115430761	3300033413	Soil	SGQTPLVMARIGAGQDKADQRLNPDGSAIPGRAHEQGAAKPKLIEGAFFE
Ga0316601_1020428372	3300033419	Soil	QTPLVMARIGAGQDKADQRLNPDGSAIPGRASEQGAAKPKLIEGAFFE
Ga0316613_106094453	3300033434	Soil	ARIGAGQDKADQRLNPDGSAIPGRAHEQGAAKPKLIAGAFFE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051173

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign