Metagenome / Metatranscriptome Family F051172

Basic Information
Family ID	F051172
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	86 residues
Representative Sequence	RIKATSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVQASAELLGRLHA
Number of Associated Samples	133
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.69 %
% of genes near scaffold ends (potentially truncated)	98.61 %
% of genes from short scaffolds (< 2000 bps)	95.14 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Bacteria (58.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.417 % of family members)
Environment Ontology (ENVO)	Unclassified (29.861 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.19% β-sheet: 5.61% Coil/Unstructured: 54.21%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF02746	MR_MLE_N	24.31
PF00753	Lactamase_B	22.22
PF01266	DAO	10.42
PF13378	MR_MLE_C	6.25
PF00117	GATase	4.17
PF06224	HTH_42	3.47
PF00682	HMGL-like	3.47
PF00920	ILVD_EDD	1.39
PF01370	Epimerase	0.69
PF02687	FtsX	0.69
PF02574	S-methyl_trans	0.69
PF00166	Cpn10	0.69
PF01939	NucS	0.69
PF01261	AP_endonuc_2	0.69
PF01904	DUF72	0.69
PF01471	PG_binding_1	0.69
PF02826	2-Hacid_dh_C	0.69
PF16363	GDP_Man_Dehyd	0.69
PF00353	HemolysinCabind	0.69
PF01734	Patatin	0.69
PF00795	CN_hydrolase	0.69
PF02567	PhzC-PhzF	0.69
PF13561	adh_short_C2	0.69
PF07729	FCD	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	48.61
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	3.47
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	2.78
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.69
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.69
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.69
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.69
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.69
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.69
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.69
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.69
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.69
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.00 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.67 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.39 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.28 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	1.39 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.28 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	1.39 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.28 %
Pirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula	1.39 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.28 %
Pirellula staleyi	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	1.39 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.28 %
Pirellula staleyi DSM 6068	strain	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi → Pirellula staleyi DSM 6068	1.39 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_117152822	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300004153\|Ga0063455_100921768	Not Available	622	Open in IMG/M
3300004153\|Ga0063455_101454672	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300004157\|Ga0062590_102090928	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005093\|Ga0062594_100239818	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300005093\|Ga0062594_102361123	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005168\|Ga0066809_10162654	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005179\|Ga0066684_10163887	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300005184\|Ga0066671_10457678	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005186\|Ga0066676_10395596	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300005330\|Ga0070690_100898651	Not Available	692	Open in IMG/M
3300005339\|Ga0070660_100114139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2151	Open in IMG/M
3300005353\|Ga0070669_100229446	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300005353\|Ga0070669_101496633	Not Available	587	Open in IMG/M
3300005356\|Ga0070674_100607782	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005438\|Ga0070701_10028014	All Organisms → cellular organisms → Bacteria	2766	Open in IMG/M
3300005444\|Ga0070694_101307684	Not Available	610	Open in IMG/M
3300005445\|Ga0070708_101656923	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005458\|Ga0070681_10298565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1521	Open in IMG/M
3300005466\|Ga0070685_11256755	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005471\|Ga0070698_101205642	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005530\|Ga0070679_101723121	Not Available	575	Open in IMG/M
3300005533\|Ga0070734_10762583	Not Available	549	Open in IMG/M
3300005546\|Ga0070696_101087429	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005549\|Ga0070704_101377320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300005564\|Ga0070664_100439535	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300005616\|Ga0068852_100745359	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005616\|Ga0068852_101150361	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005618\|Ga0068864_100321921	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300005764\|Ga0066903_101639406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1222	Open in IMG/M
3300005840\|Ga0068870_10206660	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300005843\|Ga0068860_101751183	Not Available	643	Open in IMG/M
3300006046\|Ga0066652_101498852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300006358\|Ga0068871_100592115	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300006572\|Ga0074051_11631909	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300006804\|Ga0079221_11458980	Not Available	547	Open in IMG/M
3300006844\|Ga0075428_101980523	Not Available	604	Open in IMG/M
3300006881\|Ga0068865_100884043	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300006894\|Ga0079215_10454717	Not Available	780	Open in IMG/M
3300006904\|Ga0075424_102092073	Not Available	597	Open in IMG/M
3300006904\|Ga0075424_102641785	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006953\|Ga0074063_10703742	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300007076\|Ga0075435_100826459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	807	Open in IMG/M
3300009012\|Ga0066710_102068851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300009137\|Ga0066709_102632848	Not Available	673	Open in IMG/M
3300009162\|Ga0075423_12528174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300009174\|Ga0105241_10342453	Not Available	1296	Open in IMG/M
3300010040\|Ga0126308_11304219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300010041\|Ga0126312_11088867	Not Available	586	Open in IMG/M
3300010044\|Ga0126310_11192726	Not Available	610	Open in IMG/M
3300010166\|Ga0126306_10144376	Not Available	1762	Open in IMG/M
3300010362\|Ga0126377_10103599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2600	Open in IMG/M
3300010362\|Ga0126377_12228793	Not Available	624	Open in IMG/M
3300010371\|Ga0134125_12136113	Not Available	609	Open in IMG/M
3300010373\|Ga0134128_12488835	Not Available	570	Open in IMG/M
3300010396\|Ga0134126_11447391	Not Available	758	Open in IMG/M
3300012091\|Ga0136625_1239973	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300012093\|Ga0136632_10314258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300012094\|Ga0136638_10629344	Not Available	516	Open in IMG/M
3300012184\|Ga0136610_1319568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300012186\|Ga0136620_10323369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300012186\|Ga0136620_10384535	Not Available	601	Open in IMG/M
3300012530\|Ga0136635_10008484	All Organisms → cellular organisms → Bacteria	3141	Open in IMG/M
3300012898\|Ga0157293_10005527	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300012900\|Ga0157292_10318822	Not Available	564	Open in IMG/M
3300012906\|Ga0157295_10030539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300012907\|Ga0157283_10028131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1132	Open in IMG/M
3300012914\|Ga0157297_10029563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300012955\|Ga0164298_11632580	Not Available	509	Open in IMG/M
3300012984\|Ga0164309_11634388	Not Available	552	Open in IMG/M
3300013100\|Ga0157373_10633776	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300013297\|Ga0157378_12231912	Not Available	599	Open in IMG/M
3300013306\|Ga0163162_10428285	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300014267\|Ga0075313_1122205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300014268\|Ga0075309_1158926	Not Available	580	Open in IMG/M
3300014745\|Ga0157377_10767896	Not Available	707	Open in IMG/M
3300015374\|Ga0132255_102693270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300016341\|Ga0182035_12061809	Not Available	518	Open in IMG/M
3300017695\|Ga0180121_10325180	Not Available	587	Open in IMG/M
3300017789\|Ga0136617_11269925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300017965\|Ga0190266_10064694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1360	Open in IMG/M
3300018028\|Ga0184608_10304423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300018056\|Ga0184623_10476550	Not Available	536	Open in IMG/M
3300018071\|Ga0184618_10369214	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300018076\|Ga0184609_10443560	Not Available	598	Open in IMG/M
3300018076\|Ga0184609_10527160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300018476\|Ga0190274_12021444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300018910\|Ga0193598_1079607	Not Available	763	Open in IMG/M
3300019356\|Ga0173481_10141704	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300019377\|Ga0190264_10475321	Not Available	844	Open in IMG/M
3300019767\|Ga0190267_10828554	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300019767\|Ga0190267_10853007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300020082\|Ga0206353_10380444	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300022898\|Ga0247745_1082830	Not Available	539	Open in IMG/M
3300022915\|Ga0247790_10020019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1428	Open in IMG/M
3300023057\|Ga0247797_1040581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300023073\|Ga0247744_1107272	Not Available	504	Open in IMG/M
3300025321\|Ga0207656_10564340	Not Available	580	Open in IMG/M
3300025796\|Ga0210113_1001131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6648	Open in IMG/M
3300025796\|Ga0210113_1005824	All Organisms → cellular organisms → Bacteria	2756	Open in IMG/M
3300025901\|Ga0207688_10151484	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300025903\|Ga0207680_10271642	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300025908\|Ga0207643_10198317	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300025912\|Ga0207707_10651037	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300025916\|Ga0207663_10350082	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300025919\|Ga0207657_11075231	Not Available	615	Open in IMG/M
3300025921\|Ga0207652_10357344	Not Available	1318	Open in IMG/M
3300025927\|Ga0207687_10812572	Not Available	798	Open in IMG/M
3300025927\|Ga0207687_11423159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300025932\|Ga0207690_10346221	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300025935\|Ga0207709_10614096	Not Available	862	Open in IMG/M
3300025936\|Ga0207670_11860749	Not Available	512	Open in IMG/M
3300025940\|Ga0207691_10038835	All Organisms → cellular organisms → Bacteria	4405	Open in IMG/M
3300025944\|Ga0207661_10905956	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300025960\|Ga0207651_10997642	Not Available	748	Open in IMG/M
3300026067\|Ga0207678_10272458	Not Available	1452	Open in IMG/M
3300026550\|Ga0209474_10449117	Not Available	656	Open in IMG/M
3300027560\|Ga0207981_1100813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300027840\|Ga0209683_10451834	Not Available	589	Open in IMG/M
3300028589\|Ga0247818_11386070	Not Available	507	Open in IMG/M
3300028590\|Ga0247823_11387360	Not Available	527	Open in IMG/M
3300028592\|Ga0247822_10934670	Not Available	713	Open in IMG/M
3300028803\|Ga0307281_10083136	Not Available	1056	Open in IMG/M
3300028812\|Ga0247825_10680710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300031229\|Ga0299913_10619480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300031455\|Ga0307505_10133159	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300031713\|Ga0318496_10485870	All Organisms → cellular organisms → Bacteria → PVC group	683	Open in IMG/M
3300031854\|Ga0310904_10386813	Not Available	912	Open in IMG/M
3300031954\|Ga0306926_13041589	Not Available	500	Open in IMG/M
3300031997\|Ga0315278_12203357	Not Available	509	Open in IMG/M
3300032002\|Ga0307416_102921092	Not Available	572	Open in IMG/M
3300032012\|Ga0310902_10244128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1078	Open in IMG/M
3300032054\|Ga0318570_10315792	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi → Pirellula staleyi DSM 6068	711	Open in IMG/M
3300032122\|Ga0310895_10098591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1186	Open in IMG/M
3300032126\|Ga0307415_101792173	Not Available	594	Open in IMG/M
3300032516\|Ga0315273_10883013	Not Available	1156	Open in IMG/M
3300032782\|Ga0335082_11499721	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi → Pirellula staleyi DSM 6068	546	Open in IMG/M
3300032829\|Ga0335070_11723348	Not Available	568	Open in IMG/M
3300032896\|Ga0335075_11276309	Not Available	630	Open in IMG/M
3300033417\|Ga0214471_10386325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1130	Open in IMG/M
3300033814\|Ga0364930_0206456	Not Available	667	Open in IMG/M
3300034114\|Ga0364938_061595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300034151\|Ga0364935_0178420	Not Available	679	Open in IMG/M
3300034176\|Ga0364931_0135202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.31%
Host-Associated	Host-Associated	25.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.11%
Plants	Host-Associated → Plants	25.69%
Aquatic	Environmental → Aquatic	13.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.36%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.64%
Sediment	Environmental → Aquatic → Sediment	3.47%
Floodplain	Environmental → Terrestrial → Floodplain	2.78%
Marine	Environmental → Aquatic → Marine	1.39%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.67%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.94%
Ice	Environmental → Aquatic → Freshwater → Ice	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.47%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.78%
Lake	Environmental → Aquatic → Freshwater → Lake	1.39%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%
Sand	Environmental → Terrestrial → Soil → Sand	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.94%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	6.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.39%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.39%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.39%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.69%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.42%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.08%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.08%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.39%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.39%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.39%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.39%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1171528221	3300000956	Soil	LFNAAGRRIKERSPFATTIAAAYANDYAGYLPEASDLDLVEGVPLREIVDQDEWRWAYGITNTNIDRGEVDRLVDESVDLLERLHT*
Ga0063455_1009217682	3300004153	Soil	AVGDAAIATNSFELFNEAGSRIKSASPFATTIAASYANDYLGYLPPSEDLDIVAGVPLPEILDQDRYRWAYGITNCNVDRGEVDRLVQASASLLARIR*
Ga0063455_1014546721	3300004153	Soil	AIVTNPFELFNAAGRRIKERSPFATTIAAAYANDYAGYLPEVSDLDLVEGVPVREIVNQDEWRWAYGITNTNVDRGEVDRLVDESVALLERLHA*
Ga0062590_1020909282	3300004157	Soil	NECGTRIRERSPFATTLTIAYTNDYAGYLPPSEDLDLLDGVPLDDLLDQDRYRWAYGITNSNVDRGEAERLIDESAALLERVRAAA*
Ga0062594_1002398183	3300005093	Soil	IKALSPFATTIAAAYTNDYLGYLSLSEDLDLVEGVPLREILDQDAYRWAYGITNCNVDRGEVDRLIAASGALLERLA*
Ga0062594_1023611231	3300005093	Soil	AGDTAIVTNPFELFNAAGRRIKERSPFSTTIAAAYANDYAGYLPESADLDLVEGVPLGEILDQDAWRWAYGITNSNVDRGEVDRLVGESVALLRRLHD*
Ga0066809_101626542	3300005168	Soil	NGCGTRIRDASPFSTTFTLGYTNDYAGYLPASEDLDLVAELPLDEVLDQDRYRWAYGITNSNVDRGEVDRLIDASAALLRSVAPPA*
Ga0066684_101638871	3300005179	Soil	LFNAAGRRIKERSPFPTTIAAAYANDYAGYLPETSDLDLVEGVPLREIVDQDEWRWAYGITNTNVDRGEVDRLVDESVALLERLHG*
Ga0066671_104576781	3300005184	Soil	RRIKERSPFATTIAAAYANDYAGYLPEVSDLDLVEGVPVREIVNQDEWRWAYGITNTNVDRGEVDRLVDESVALLERLHA*
Ga0066676_103955961	3300005186	Soil	AIVTNSFELFNEAGSRIKELSPYGTTIAASYANDYLGYLPLSEDLDLVADVPLKDVLDQDAYRWAYGITNCNVDRGEVDRLVDASGALVSRI*
Ga0070690_1008986512	3300005330	Switchgrass Rhizosphere	KASSPFGTTIAAAYTNDCLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA*
Ga0070660_1001141393	3300005339	Corn Rhizosphere	SFELFNEAGSQIKALSPFATTIAAAYTNDYLGYLSLSEDLDLVEGVPLREILDQDTYRWAYGITNCNVDRGEVDRLIAASGALLERLA*
Ga0070669_1002294463	3300005353	Switchgrass Rhizosphere	AIAANSFELFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASGDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA*
Ga0070669_1014966331	3300005353	Switchgrass Rhizosphere	AIAANSFELFNEPGSQIKASSPFGTTIAAAYTNDYLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA*
Ga0070674_1006077821	3300005356	Miscanthus Rhizosphere	AIAANSFELFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA*
Ga0070701_100280141	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	KASSPFGTTIAAAYTNDYLGYLPASGDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA*
Ga0070694_1013076842	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	PFETTFVLGYTNDYAGYLPPSEDLDLLDGVPLDDLLDQDRYRWAYGITNSNVDRGEVERVVDESVGLLRGVA*
Ga0070708_1016569232	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SFELFNEAGSRIKDASPFGTTIAASYTNDYLGYLPLSEDLALVDGVPLREILDQDRYRWAYGITNCNVDRGEVERMIEASGALLARLT*
Ga0070681_102985651	3300005458	Corn Rhizosphere	LITNSFELFNEAGSQIKALSPFATTIAAAYTNDYLGYLSLSEDLDLVEGVPLREILDQDAYRWAYGITNCNVDRGEVDRLIAASGALLERLA*
Ga0070685_112567552	3300005466	Switchgrass Rhizosphere	AGVRIKDGSPYRTTIAAAYTNDYAGYLPESEDYDLVEGIPLADILDQNRYRWAYGITNTNIDRGEVDRLIDESIALLNSVHG*
Ga0070698_1012056422	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ERSPFATTIAAAYANDYAGYLPETSDLDLVEGVPLREIVNQDEWRWAYGITNSNLDRGEVDRLVDESVALLERLHA*
Ga0070679_1017231212	3300005530	Corn Rhizosphere	KASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVRLDQILDQDQWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA*
Ga0070734_107625831	3300005533	Surface Soil	AAGDIAIVTNPYELFSAVGSRIKAASPFGTTVTAAYANDYAGYLPETSDLDLVEGVPLAEIVDQDRYRWAYGITNTNVDRGEVERLIDRSADVLGELRALALP*
Ga0070696_1010874292	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVETSAQLLGRLHAPA*
Ga0070704_1013773201	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SPFATTIAAAYTNDYLGYLPLSEELASVDGVPLREILDQNRYRWAYGITNCNVDRGEVERMIDASVALLARL*
Ga0070664_1004395353	3300005564	Corn Rhizosphere	PGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVRLDQILDQDQWRWAYGITNSNVDRGEVDRLVEASSALLGRLDDAA*
Ga0068852_1007453592	3300005616	Corn Rhizosphere	ANSFELFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA*
Ga0068852_1011503611	3300005616	Corn Rhizosphere	ALAVGDTAIAANSFELFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVETSAQLLGRLHAAG*
Ga0068864_1003219211	3300005618	Switchgrass Rhizosphere	IAANSFELFNGPGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA*
Ga0066903_1016394063	3300005764	Tropical Forest Soil	VGRRIKERSPFATTVTAAYANDYAGYLPESSDLDLVEGVPLREIVNQDEWRWAYGITNTNVDRGEVDRLADESVALLERLRV*
Ga0068870_102066601	3300005840	Miscanthus Rhizosphere	RIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVETSAQLLGRLHAAG*
Ga0068860_1017511832	3300005843	Switchgrass Rhizosphere	IVTNPFELFNAAGRRIKDASPFGTTLAAAYANDYAGYLPESEDMDLVAGVPLREIVDQDEYRWAYGITNTNVDRGEVDRLIDESAELVVRLHA*
Ga0066652_1014988522	3300006046	Soil	AGRRIKERSPFATTIAAAYANDYAGYLPETSDLDLVEGVPLREIVDQDEWRWAYGITNTNVDRGEVDRLVDESVALLERLHG*
Ga0068871_1005921151	3300006358	Miscanthus Rhizosphere	NEPGTRIKATSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASADLLGRLGAPA*
Ga0074051_116319092	3300006572	Soil	ANSFELFNEPGSRIKASSPFDTTIAAAYTNDYLGYLPTSEDLDLVAGVPLGRILDQDEWRWAYGITNSNVDRGGVDRVVDESVALLRGVA*
Ga0079221_114589802	3300006804	Agricultural Soil	AAGRRIKERSPFATTISAAYANDYAGYVPESSDLDLVEGVPLREIVNQDEWRWAYGITNTNVDRGEVDRLVDESVALLERLQP*
Ga0075428_1019805231	3300006844	Populus Rhizosphere	SPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVETSAQLLGRLHAAG*
Ga0068865_1008840431	3300006881	Miscanthus Rhizosphere	ANPFELFNECGTRIREGSPFDTTFVLGYTNDYAGYLPASEDLDLVAGVELDDVLDQDRYRWAYGITSSNVDRGEVDRVIEESVGLLRGLA*
Ga0079215_104547172	3300006894	Agricultural Soil	EGSPFETTFTLGYTNDYAGYLPASEDLDLVDGVPLDDVLDQDRYRWAYGITNSNVDRGEVDRVVGTSVELLHRVA*
Ga0075424_1020920732	3300006904	Populus Rhizosphere	AGRRIKERSPFATTIAAAYANDYAGYLPEVSDLDLVEGVPVREIVNQDEWRWAYGITNTNVDRGEVDRLADESVALLERLRV*
Ga0075424_1026417852	3300006904	Populus Rhizosphere	AAIAANSFELFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASADLLGRLGAPA*
Ga0074063_107037422	3300006953	Soil	NPFELFNHAGQRIKDASPYGITVAAAYANDYAGYLPETSDYDLVAGVPLREIVDQDQWRWAYGITNTNIDRGEVDRVVDESIALLRRLHG*
Ga0075435_1008264591	3300007076	Populus Rhizosphere	FELFNAAGGRIKARSPFGTTITAAYANDYAGYVPETSDLDLVEGVPLREIVDQDKWRWAYGITNTNVDRGEVDRLVDESVALLERLHA*
Ga0066710_1020688511	3300009012	Grasslands Soil	VTNPFELFNAAGRRIKERSPFATTIAAAYANDYAGYLPETSDLDLVEGVPLREIVDQDEWRWAYGITNTNVDRGEVDRLVDESVALLERLHA
Ga0066709_1026328482	3300009137	Grasslands Soil	EAGARIKAQSPFATTVAAAYANDYLGYLPPSEDLELVDGVPLRDVLDQDRHRWAYGITNSNVDRGEVDRLIEASGALLARLA*
Ga0075423_125281742	3300009162	Populus Rhizosphere	ELFNAVGGRIKERSPFGTTIAAAYANDYAGYLPETSDLDLVEGVPLREIVNQDEWRWAYGISNSNLDRGEVDRLVDESVALLERLHA*
Ga0105241_103424531	3300009174	Corn Rhizosphere	TNSFELFNEAGARIKAASPFATTIAAAYTNDYLGYLPPSEDLDLVAGVPLREILDQDRYRWAYGITNCNVDRGEVDRLIAASGALLERLA*
Ga0126308_113042191	3300010040	Serpentine Soil	PFELFNECGTRIRKGSPFETTFTLGYTNDYVGYLPASEDLDLVAGVPLDEVLDQDRYRWAYGITSSNVERGEVDRVVDESVSLLRGVA*
Ga0126312_110888671	3300010041	Serpentine Soil	ECGIRIREGSPFATTFALGYTNDYAGYLPASEDLDLLDGAPLDDLLDQDRYRWAYGITNSNVDRGEVDGLVDKSVALLGRVP*
Ga0126310_111927261	3300010044	Serpentine Soil	DGSPFATTFALGYTNDYGGYLPPSEDLELVDGVPLDDLLDQDRYRWAYGITNSNVERGGVERVVDGSIELLRGLA*
Ga0126306_101443761	3300010166	Serpentine Soil	IAANPFELFNECGTRIRGGSPFETTFTLGYTNDYAGYLPASEDLDLVAEVALDEILDQDRYRWAYGITNSNVDRGEVDRVLDESVALLRGIA*
Ga0126377_101035991	3300010362	Tropical Forest Soil	QVIAVGDTAIATNPFELFNHAGVRIKEGSPFGTTIAAAYANDYAGYLPESSDLDLVECVPLREIVDQDEWRWAYGITNTNVDRGEVDRLVDESVDLLERLHA*
Ga0126377_122287931	3300010362	Tropical Forest Soil	NPFELFNAAGRRIKERSPFGTTIAAAYANDYAGYLPEGSDLDLVEGVPLREILDQDEWRWAYGITNTNVDRGEVDRLVDESVDLLERLHA*
Ga0134125_121361132	3300010371	Terrestrial Soil	ELFNEPGSQIKASSPFGTTIAAAYTNDYLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA*
Ga0134128_124888352	3300010373	Terrestrial Soil	AANSFELFNGPGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVETSAQLLGRLHAPA*
Ga0134126_114473911	3300010396	Terrestrial Soil	TAIVTNPFELFNAAGRRIKERSPFATTISAAYANDYAGYVPESSDLDLVEGVPLREIVNQDEWRWAYGITNTNVDRGEVDRLVDESVALLERLHG*
Ga0136625_12399731	3300012091	Polar Desert Sand	RIGEAGIAANPFELFNECGSRIRADSPFETTFTLGYCNDYAGYLPASEDLDLLDGAVLDDLLDQDSYRWAYGITSSNVERGEVDRLVRESGDLLRKLAT*
Ga0136632_103142582	3300012093	Polar Desert Sand	NEQGQRIRAGSPFATTFVLGYTNDYAGYLPGDEDLDLIDGVPLDDLLDQDRYRWAYGITNSNVDRGELERVVDESVALLRALA*
Ga0136638_106293441	3300012094	Polar Desert Sand	RIRTGSPFATTFVLGYSNDYAGYLPGDEELDLLDGVPLAELLDQNRYRWAYGITNSNLDRGEVDRVVEESVALLRGLA*
Ga0136610_13195681	3300012184	Polar Desert Sand	EQGQRIRAGSPFATTFVLGYTNDYGGYLPGDGDLALLDGVPLDDLLDQDRYRWAYGITNSNVDRGEVDRVVEESVSLLHRLA*
Ga0136620_103233692	3300012186	Polar Desert Sand	FELFNECGARIRKGSPYETTFTLGYTNDYAGYLPASEDLDLLDGVPLDDLLDQDRYRWAYGITNSNVDRGELERVVDESVALLRGLA*
Ga0136620_103845351	3300012186	Polar Desert Sand	IREGSPFDTTFTPGYTNDYAGYLPPSEDLELLDGVPLDDLLDQDRYRWAYGITNSNVDRGELERVVDESVALLRALA*
Ga0136635_100084844	3300012530	Polar Desert Sand	CGARIRERSPFETTFTLGYTNDYAGYLPASEDLDLLDGVPLDDILDQNRYRWAYGITNSNVDRGEVERVVGESVELLRGLS*
Ga0157293_100055273	3300012898	Soil	SFELFNRPGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVALDQILDQDQWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA*
Ga0157292_103188222	3300012900	Soil	FNGPGSRIKESSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVRLDQILDQDQWRWAYGITNSNVDRGEVDRLVAASSELLGRLDDAA*
Ga0157295_100305391	3300012906	Soil	GPGARIKAQSPFGTTVAASYTNDYLGYLPASEDLDLVAGVPLDEILNQDDWRWAYGITNSNVDRGEVDRLVEASGELLGRLRDGA*
Ga0157283_100281311	3300012907	Soil	NPFELFNGPGARIKAQSPFGTTVAASYTNDYLGYLPASEDLDLVAGVPLDEILNQDDWRWAYGITNSNLDRGEVDRLVEASGELLGRLRDGA*
Ga0157297_100295633	3300012914	Soil	FNGPGARIKAQSPFGTTVAASYTNDYLGYLPASEDLDLVAGVPLDEILNQDDWRWAYGITNSNVDRGEVDRLVEASGELLGRLRDGA*
Ga0164298_116325801	3300012955	Soil	KASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGRILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA*
Ga0164309_116343882	3300012984	Soil	IAANSFELFNEPGSRIKAASPFGTTIAAAYTNDYLGYLPASKDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVQASAELLGRLHAQA*
Ga0157373_106337762	3300013100	Corn Rhizosphere	LFNEAGSQIKALSPFATTIAAAYTNDYLGYLSLSEDLDLVEGVPLREILDQDAYRWAYGITNCNVDRGEVDRLIAASGALLERLA*
Ga0157378_122319122	3300013297	Miscanthus Rhizosphere	ELFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASGDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASADLLGRLGAPA*
Ga0163162_104282853	3300013306	Switchgrass Rhizosphere	ASSPFGTTIAAAYTNDYLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA*
Ga0075313_11222052	3300014267	Natural And Restored Wetlands	ASPFATTFTIAYSNDYAGYLPASEDLDLLDGVPLDDLLDQDRYRWAYGITNSNVDRGEVDRLLDESAGLLGRLHAS*
Ga0075309_11589261	3300014268	Natural And Restored Wetlands	FDTTFALGYSNDYAGYLPASEDLDLVDGVGLDEVLDQDAYRWAYGITNSNVDRGEVERVVAESVALLRSLA*
Ga0157377_107678962	3300014745	Miscanthus Rhizosphere	RIKASSPFGTTIAAAYTNDYLGYLPASGDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA*
Ga0132255_1026932701	3300015374	Arabidopsis Rhizosphere	NHAGVRIKDGSPYRTTITAAYTNDYAGYLPESADMDLVEGVPLQEILDQDRYGWAYGITNTNVDRGEVDRLIDESKALLRQVHG*
Ga0182035_120618091	3300016341	Soil	AGDTAIVTNPFELFNHAGARIKEASAFGTTVAAAYANDYAGYLPETSDYDLVAGVPLREIVDQDNWRWAYGITNTNVDRGETDRVVDESIALLNRLHG
Ga0180121_103251801	3300017695	Polar Desert Sand	RIREFSPYETTFTLGYTNDYAGYLPASEDLDLLDGVPLDELLDQDRYRWAYGITNSNVDRGEVERVVDESVALLRGLA
Ga0136617_112699251	3300017789	Polar Desert Sand	AAIAANPFELFNECGARIREGSPYETTFTLGYTNDYAGYLPASEDLDLLEGVPLDDLLDQDRYRWAYGITNSNVDRGELERVVDESVALLRGLA
Ga0190266_100646942	3300017965	Soil	GVRIREGSRFETTFTLGYTNDYAGYLPPSEDLDLVDGVPLDDVLDQDRYRWAYGITNSNVDRGEVDRVIDESVGLLDRLA
Ga0184608_103044231	3300018028	Groundwater Sediment	ECGVSIREGSPFETTFVLGYTNDYAGYLPASEDLDPLDGVALDDLLDQDRYRWAYGITNSNVDCGEVDRVVDESVGLLRGVK
Ga0184623_104765501	3300018056	Groundwater Sediment	SPFEITFALGYTNDYTGYLPASEDLDLLDGVPLDDLLDQDRYRWAYGITSSNVDRGEVDRVVAGRVALLHGVVAYVG
Ga0184618_103692141	3300018071	Groundwater Sediment	GGAAIAANPFELFNECGVRIREGSPFETTFVLGYTNDYAGYLPASEDLDLLDGVPLDDLLDQDRYRWAYGITNSNVDRGEVDRVVDGSVAMLRGVA
Ga0184609_104435601	3300018076	Groundwater Sediment	RIREGSPFETTFTLGYTNDYAGYLPPSGDLDLVDGVPLDDVLDQDRYRWAYGITNSNVDRGEVERVVDESVKLLRGVA
Ga0184609_105271602	3300018076	Groundwater Sediment	ANPFELFNECGTQIREGSPFATTFTLGYTNDYAGYLPPSDDLDLLDGVPLDDILDQDRYRWAYGITNSNVDRGEVERVVDGSVKLLRGAA
Ga0190274_120214442	3300018476	Soil	FNECGVRIREGSPFETTFTLGYTNDYAGYLPASEDLDRVTGIPLGEVLDQDEDRWACGITSSNVDRGEAERVVSESVALLRGVS
Ga0193598_10796071	3300018910	Soil	SGVRIRAGSPFETTFVLGYTNDYAGYLPGSEDLDLLDGIPLDVLLDQDRYRWAYGITNSNVDRGEVDRLTDGSVALLNGLT
Ga0173481_101417042	3300019356	Soil	AIAANPFELFNECGSRIREGSPFETTFVLGYTNDYAGYLPASEDLDLLDGAELDELLDQDRYRWAYGITSSNVDRGEVDRVVDESVALLRGVA
Ga0190264_104753212	3300019377	Soil	RSPFETTFVLGYTNDYAGYLPPSEDLDLLDAVPLDDLLDQDRYRWAYGITNSNVDRGEVDRVVDGSVALLRGVA
Ga0190267_108285541	3300019767	Soil	NPFELFNEQGQRIRAGSPFATTFVLGYTNDYAGYLPASEDLDLIEGVELDDVLDQDRYRWAYGITSSNVDRGEVERVVDESVALLRGVS
Ga0190267_108530072	3300019767	Soil	IVANPFELFNECGTRIRERSPFATTFTIAYTNDYAGYLPPSEDLDLLDGLPLDALLDQDRYRWAYGITNSNVDRGEAERLIEESAALLERVRAAA
Ga0206353_103804443	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	EALAVGDTAIAANSFELFNEPGSQIKASSPFGTTIAAAYTNDYLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA
Ga0247745_10828301	3300022898	Soil	FELFNGPGARIKAQSPFGTTVAASYTNDYLGYLPASEDLDLVAGVPLDEILKQDDWRWAYGITNSNVDRGEVDRLVEASGELLGRLRDGA
Ga0247790_100200191	3300022915	Soil	AIVANSFELFNGPGARIKAQSPFGTTVAASYTNDYLGYLPASEDLDLVAGVPLDEILNQDDWRWAYGITNSNVDRGEVDRLVEASGELLGRLRDGA
Ga0247797_10405811	3300023057	Soil	PGARIKAQSPFGTTVAASYTNDYLGYLPASEDLDLVAGVPLDEILKQDDWRWAYGITNSNVDRGEVDRLVEASGELLGRLRDGA
Ga0247744_11072722	3300023073	Soil	ASSPFGTTIAAAYTNDYLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA
Ga0207656_105643401	3300025321	Corn Rhizosphere	SFELFNEPGSQIKASSPFGTTIAAAYTNDYLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA
Ga0210113_10011311	3300025796	Natural And Restored Wetlands	FNECGARIRDASPFATTFTIAYSNDYAGYLPASEDLDLLDGVPLDDLLDQDRYRWAYGITNSNVDRGEVDRLLDESAGLLGRLHAS
Ga0210113_10058241	3300025796	Natural And Restored Wetlands	RAGSPFETTFALGYSNDYAGYLPASEDLDLVDGVGLDEVLDQDAYRWAYGITNSNVDRGEVERVVAESVALLRSLA
Ga0207688_101514843	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	GSRIKSSSPFGTTIAAAYTNDYLGYLPASGDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA
Ga0207680_102716423	3300025903	Switchgrass Rhizosphere	SPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA
Ga0207643_101983173	3300025908	Miscanthus Rhizosphere	NSFELFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASGDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA
Ga0207707_106510372	3300025912	Corn Rhizosphere	DGAVITNSFELFNEAGSQIKALSPFATTIAAAYTNDYLGYLSLSEDLDLVEGVPLREILDQDAYRWAYGITNCNVDRGEVDRLIAASGALLERLA
Ga0207663_103500822	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MYSCRSGSVFWKDVSRINAAGSRIKAASPFKTTLTAAYANDYAGYLPESSDLDLVEGIPLGEILDQDRYRWAYGITNTNVDRGEVDRLIDESIALLSRLHG
Ga0207657_110752312	3300025919	Corn Rhizosphere	ELFNGPGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA
Ga0207652_103573443	3300025921	Corn Rhizosphere	FNEAGSQIKALSPFATTIAAAYTNDYLGYLSLSEDLDLVEGVPLREILDQDAYRWAYGITNCNVDRGEVDRLIAASGALLERLA
Ga0207687_108125721	3300025927	Miscanthus Rhizosphere	IAANSFELFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASDDLDLVAGVPLGDILDQDKWRWAYGITNSNVDRGEVDRLVEASTELLGRLHA
Ga0207687_114231592	3300025927	Miscanthus Rhizosphere	RIKAQSPFGTTVAASYTNDYLGYLPASEDLDLVAGVPLDEILNQDDWRWAYGITNSNVDRGEVDRLVEASGELLGRLRDGA
Ga0207690_103462211	3300025932	Corn Rhizosphere	PFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA
Ga0207709_106140962	3300025935	Miscanthus Rhizosphere	EASPFATTFTLAYTNDYAGYMPASEDLDLLDGIPLDDLLDQDRYRWAYGITNSNVDRGETDRLIDQSAALLERLA
Ga0207670_118607491	3300025936	Switchgrass Rhizosphere	SSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLDQVLDQDEWRWAYGITNSNVDRGEVDRLVETSAELLGRLHAAG
Ga0207691_100388358	3300025940	Miscanthus Rhizosphere	LAVGDTAIAANSFELFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASADLLGRLGAPA
Ga0207661_109059562	3300025944	Corn Rhizosphere	RIKATSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVQASAELLGRLHA
Ga0207651_109976422	3300025960	Switchgrass Rhizosphere	IAANSFELFNGPGSRIKASSPFGTTITAAYTNDYLGYLPASQDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASADLLGRLGAPA
Ga0207678_102724581	3300026067	Corn Rhizosphere	GVRIKEASPYRTTLTAAYTNDYAGYLPESEDYDLVDGVPLAEILDQDAYRWAYGITNTNIDRGEQTRARA
Ga0209474_104491171	3300026550	Soil	DRSPFTTTIAAAYANDYAGYLPESADLDLVEGVPLREIVDQDEWRWAYGITNTNVDRGEVDRLVDESVAVLDRLHE
Ga0207981_11008132	3300027560	Soil	NGCGTRIRDASPFSTTFTLGYTNDYAGYLPASEDLDLVAELPLDEVLDQDRYRWAYGITNSNVDRGEVDRLIDASAALLRSVAPPA
Ga0209683_104518342	3300027840	Wetland Sediment	AASPFDTTFVLGYSNGQAGYLPASADLDLVDDVPLADVLDQERYRWAYGITTSEVDRGEVDRLVVESAALVSGLAATAGRD
Ga0247818_113860701	3300028589	Soil	FNEVGSRIKDASPFATTIAAAYTNDYLGYLPPSEDLALVDGVPLDEILDQDRYRWAYGITNCNVDRGEVDRLAGASVDLLRRVAG
Ga0247823_113873602	3300028590	Soil	AVGDTAIAANSFELFNGPGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASADLLGRLGAPA
Ga0247822_109346701	3300028592	Soil	LFNEPGSRIKASSPFGTTIAAAYTNDYLGYLPASEDLDLVAGVPLGEILDQDEWRWAYGITNSNVDRGEVDRLVEASAELLGRLGAPA
Ga0307281_100831362	3300028803	Soil	IREGSPFDTTFVLGYTNDYAGYLPASEDLDLVEGVELDDVLDQDRYRWAYGITSSNVDRGEVDRVVDESVELLRGVA
Ga0247825_106807102	3300028812	Soil	KAQSPFGTTVAASYTNDYLGYLPASEDLDLVAGVPLDEILNQDDWRWAYGITNSNVDRGEVDRLVEASGELLGRLRDGA
Ga0299913_106194801	3300031229	Soil	EPGQRIRAGSPFETTFALGYSNDYAGYLPASEDLDLLDGVGLDDLLDQSQYRWAYGITNSNVERGEVDRLVDESVALLRRLA
Ga0307505_101331591	3300031455	Soil	ELFNEQGQRIRAGSPFATTFALGYTNDYAGYLPGDEDLDLLDGVGLDELLDQDAYRWAYGITNSNVDRGEVDRLVEASTELLGRLHA
Ga0318496_104858701	3300031713	Soil	FELFNHAGVRIKEASPFGTTVAAAYANDYAGYLPETSDYDLVAGVPLREIVDQDNWRWAYGITNTNVDRGETDRVVDESIALLNRLHG
Ga0310904_103868131	3300031854	Soil	SPFATTFTLAYTNDYAGYMPASEDLDLLDGIPLDDLLDQDRYRWAYGITNSNVDRGEADRLIDQSAALLERLA
Ga0306926_130415892	3300031954	Soil	ELFNAAGLRIKQASPFATTVTAAYANDYAGYLPESADLDLVAGVPLRDIIDQDRYRWAYGITNSNLEPGEVDRLVDASVELLGRLHAS
Ga0315278_122033572	3300031997	Sediment	RIRDLSPFETTFTLGYCNDYVGYLPTSEDLDLVAGVPLDDILDQDRYRWAYGITSSNVERGEVDRLIDESGALLRSLRGTT
Ga0307416_1029210922	3300032002	Rhizosphere	RERSPFETTFTLGYTNDYAGYLPPSEDLGLLDGVPLDGLLDQDRYRWAYGITNSNVDRGEVERVVDESVELLRGLR
Ga0310902_102441281	3300032012	Soil	GARIREASPFATTFTLAYTNDYAGYMPASEDLDLLDGIPLDDLLDQDRYRWAYGITNSNVDRGEADRLIDESAALLERLA
Ga0318570_103157921	3300032054	Soil	FNHAGARIKEASAFGTTVAAAYANDYAGYLPETSDYDLVAGVPLREIVDQDNWRWAYGITNTNVDRGETDRVVDESIALLNRLHG
Ga0310895_100985912	3300032122	Soil	PFELFNECGARIREASPFATTFTLAYTNDYAGYMPASEDLDLLDGIPLDDLLDQDRYRWAYGITNSNVDRGEADRLIDESAALLERLA
Ga0307415_1017921731	3300032126	Rhizosphere	RKGSPFETTFTLGYTNDYAGYLPASEDLDLVAGVPLDEVLDQDRYRWAYGITSSNVERGEVDRVVDESVSLLRGVA
Ga0315273_108830131	3300032516	Sediment	NECGSRIRELSPFRTTFTLGYCNDYAGYLPASEDLDLVEGLPLDEVLDQDDYRWAYGITTSNVDRGEVDRVIDVAGAQLRSIGGTS
Ga0335082_114997212	3300032782	Soil	GQRIKDGSPYRTTVAAAYANDYAGYLPESTDLDLVAGVPLREIVDQDQWRWAYGITNTNVDRGEVDRVVDESVALLQRLHG
Ga0335070_117233481	3300032829	Soil	GDVAIVTNPFELFNAAGRRIKEGSPFTTTVAAAYANDYAGYLPESSDLDLVAGVPLAEILNQDEYRWAYGITSSNVDRGEVDRLVDESTALLHRLRA
Ga0335075_112763091	3300032896	Soil	RIKEASPFTTTVAAAYANDYAGYLPETADLDLVDGVPLREIVDQDRYRWAYGITNTNVDRGETDRLVDESVALLRRLHA
Ga0214471_103863251	3300033417	Soil	AIAANPFELFNECGSRIREGSPFATTFALGYTNDYAGYLPPSEDLDLLDGVPLDDLLDQDRYRWAYGITNSNVDRGEVDRVVDESVVLLRGLA
Ga0364930_0206456_2_244	3300033814	Sediment	RIRERSSFATTFVLGYCNDYAGYLPASEDLDLVAEVPLAEILDQDRYRWAYGITSSNVDRGEVDRLIEASAELLARVSSV
Ga0364938_061595_401_670	3300034114	Sediment	NPFELFNECGSRIREGSPFTTTFTLGYTNDYAGYLPPSEDLDLLDGVPLGDLLDQDRYRWAYGITNSNVDRGEVDRVIDESVGLLDRLA
Ga0364935_0178420_447_677	3300034151	Sediment	REASPFTTTFTLAYTNDYAGYLPASEDLDLLDGVPLDDLLDQDRYRWAYGITNSNVDRGEGDRVIDESVGLLDGLA
Ga0364931_0135202_516_791	3300034176	Sediment	AANPFELFNECGTRIREGSPFETTFTLGYTNDYAGYLPPSEDLDLVDGVPLDDLLDQDRYRWAYGITNSNVDRGEVERVVDESVALLRRVA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051172

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign