Metagenome / Metatranscriptome Family F051102

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051102
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	36 residues
Representative Sequence	MKRPDTPLPGLQRHHIVIAIIAIVVAVALVLNYYLW
Number of Associated Samples	99
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.51 %
% of genes near scaffold ends (potentially truncated)	15.28 %
% of genes from short scaffolds (< 2000 bps)	75.69 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.583 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (18.056 % of family members)
Environment Ontology (ENVO)	Unclassified (41.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.889 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.19% β-sheet: 0.00% Coil/Unstructured: 57.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00682	HMGL-like	41.67
PF13673	Acetyltransf_10	38.19
PF09190	DALR_2	6.94
PF08502	LeuA_dimer	4.86
PF12681	Glyoxalase_2	1.39
PF03641	Lysine_decarbox	1.39
PF00664	ABC_membrane	0.69
PF07992	Pyr_redox_2	0.69
PF04480	DUF559	0.69
PF01047	MarR	0.69
PF12802	MarR_2	0.69
PF01406	tRNA-synt_1e	0.69
PF02666	PS_Dcarbxylase	0.69
PF00903	Glyoxalase	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	7.64
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	4.86
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	1.39
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.69
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.69
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.58 %
Unclassified	root	N/A	10.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.58 %
Unclassified	root	N/A	10.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.58 %
Unclassified	root	N/A	10.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.81 %
Unclassified	root	N/A	10.42 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	77.78 %
Unclassified	root	N/A	10.42 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	70.14 %
Unclassified	root	N/A	10.42 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	34.72 %
Unclassified	root	N/A	10.42 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.39 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.39 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.50 %
Unclassified	root	N/A	10.42 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	4.17 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	1.39 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.69 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.50 %
Unclassified	root	N/A	10.42 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	4.17 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	1.39 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.69 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.50 %
Unclassified	root	N/A	10.42 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	4.17 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1.39 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.69 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0262586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	532	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1044645	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10004162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3928	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10004629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3756	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10130314	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10003384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3613	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10005266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3000	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10085155	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300005332\|Ga0066388_106539153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	587	Open in IMG/M
3300005540\|Ga0066697_10150917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1372	Open in IMG/M
3300005554\|Ga0066661_10034460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2818	Open in IMG/M
3300005555\|Ga0066692_10046275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2396	Open in IMG/M
3300005555\|Ga0066692_10837218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	565	Open in IMG/M
3300005557\|Ga0066704_10579104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	726	Open in IMG/M
3300005560\|Ga0066670_10007089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4560	Open in IMG/M
3300005602\|Ga0070762_10697579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	681	Open in IMG/M
3300005713\|Ga0066905_100118810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1839	Open in IMG/M
3300005713\|Ga0066905_100128389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1784	Open in IMG/M
3300005713\|Ga0066905_100199685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1494	Open in IMG/M
3300005713\|Ga0066905_100418269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1092	Open in IMG/M
3300005713\|Ga0066905_100571495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	952	Open in IMG/M
3300005713\|Ga0066905_100839843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	799	Open in IMG/M
3300005713\|Ga0066905_100894701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	776	Open in IMG/M
3300005713\|Ga0066905_101100466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300005713\|Ga0066905_101125630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	698	Open in IMG/M
3300005713\|Ga0066905_101894747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	551	Open in IMG/M
3300005713\|Ga0066905_102050091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	531	Open in IMG/M
3300005764\|Ga0066903_100229554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2828	Open in IMG/M
3300005764\|Ga0066903_100277425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2623	Open in IMG/M
3300005764\|Ga0066903_103341882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	866	Open in IMG/M
3300005764\|Ga0066903_103728861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300005764\|Ga0066903_103774533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	814	Open in IMG/M
3300005764\|Ga0066903_103932881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	797	Open in IMG/M
3300005764\|Ga0066903_104692709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	727	Open in IMG/M
3300005764\|Ga0066903_106692926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	599	Open in IMG/M
3300005764\|Ga0066903_107678674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	555	Open in IMG/M
3300005764\|Ga0066903_107897135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	546	Open in IMG/M
3300005937\|Ga0081455_10005505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	13877	Open in IMG/M
3300005937\|Ga0081455_10037182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4327	Open in IMG/M
3300006028\|Ga0070717_10014365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6092	Open in IMG/M
3300006028\|Ga0070717_10176562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1860	Open in IMG/M
3300006038\|Ga0075365_10512936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	848	Open in IMG/M
3300006604\|Ga0074060_10003584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	891	Open in IMG/M
3300006755\|Ga0079222_10773777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	777	Open in IMG/M
3300006806\|Ga0079220_10316797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	973	Open in IMG/M
3300006852\|Ga0075433_10912475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	766	Open in IMG/M
3300006953\|Ga0074063_10093887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1314	Open in IMG/M
3300009089\|Ga0099828_10342383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1347	Open in IMG/M
3300009100\|Ga0075418_12306958	Not Available	587	Open in IMG/M
3300009792\|Ga0126374_10032893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2453	Open in IMG/M
3300009792\|Ga0126374_11214495	Not Available	604	Open in IMG/M
3300010043\|Ga0126380_10500447	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300010043\|Ga0126380_11187055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	657	Open in IMG/M
3300010043\|Ga0126380_11503806	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010046\|Ga0126384_10079473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2357	Open in IMG/M
3300010046\|Ga0126384_12031739	Not Available	550	Open in IMG/M
3300010048\|Ga0126373_10592084	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300010333\|Ga0134080_10527893	Not Available	565	Open in IMG/M
3300010359\|Ga0126376_10467424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1158	Open in IMG/M
3300010360\|Ga0126372_10504308	Not Available	1137	Open in IMG/M
3300010360\|Ga0126372_11216886	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300010361\|Ga0126378_10670969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1149	Open in IMG/M
3300010361\|Ga0126378_12810099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	556	Open in IMG/M
3300010366\|Ga0126379_10225433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1824	Open in IMG/M
3300010366\|Ga0126379_13030572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	562	Open in IMG/M
3300010376\|Ga0126381_103808915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	589	Open in IMG/M
3300010396\|Ga0134126_10287877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1932	Open in IMG/M
3300010398\|Ga0126383_11496628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	765	Open in IMG/M
3300010403\|Ga0134123_11560162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300010403\|Ga0134123_12033517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300010999\|Ga0138505_100011368	All Organisms → cellular organisms → Bacteria → Proteobacteria	1034	Open in IMG/M
3300012022\|Ga0120191_10021475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	925	Open in IMG/M
3300012198\|Ga0137364_10009528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5470	Open in IMG/M
3300012201\|Ga0137365_10003417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12662	Open in IMG/M
3300012202\|Ga0137363_10211113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1562	Open in IMG/M
3300012203\|Ga0137399_11741250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	512	Open in IMG/M
3300012204\|Ga0137374_10062981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3708	Open in IMG/M
3300012206\|Ga0137380_10217507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1728	Open in IMG/M
3300012206\|Ga0137380_11332111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	603	Open in IMG/M
3300012208\|Ga0137376_11277892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	624	Open in IMG/M
3300012351\|Ga0137386_10616466	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300012354\|Ga0137366_10452009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	931	Open in IMG/M
3300012358\|Ga0137368_10093209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2360	Open in IMG/M
3300012918\|Ga0137396_10734253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	728	Open in IMG/M
3300012985\|Ga0164308_10594391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	940	Open in IMG/M
3300012989\|Ga0164305_10453839	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300014150\|Ga0134081_10036261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1443	Open in IMG/M
3300014157\|Ga0134078_10004159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3915	Open in IMG/M
3300015371\|Ga0132258_13396764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1093	Open in IMG/M
3300015374\|Ga0132255_106058093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	512	Open in IMG/M
3300016404\|Ga0182037_10199402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1551	Open in IMG/M
3300018061\|Ga0184619_10470257	Not Available	558	Open in IMG/M
3300018431\|Ga0066655_10092779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1673	Open in IMG/M
3300018433\|Ga0066667_10303267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1243	Open in IMG/M
3300018468\|Ga0066662_10143753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1790	Open in IMG/M
3300018468\|Ga0066662_10558185	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300020579\|Ga0210407_10399723	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300021178\|Ga0210408_10096197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2326	Open in IMG/M
3300021361\|Ga0213872_10420753	Not Available	540	Open in IMG/M
3300021432\|Ga0210384_11419472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	599	Open in IMG/M
3300021478\|Ga0210402_10443218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1206	Open in IMG/M
3300021560\|Ga0126371_10404704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1507	Open in IMG/M
3300021560\|Ga0126371_11266222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	872	Open in IMG/M
3300026306\|Ga0209468_1009988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3540	Open in IMG/M
3300026354\|Ga0257180_1022569	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300027061\|Ga0209729_1002222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1776	Open in IMG/M
3300027119\|Ga0209522_1013916	Not Available	899	Open in IMG/M
3300027576\|Ga0209003_1046112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	770	Open in IMG/M
3300027646\|Ga0209466_1021169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1352	Open in IMG/M
3300027654\|Ga0209799_1020132	All Organisms → cellular organisms → Bacteria → Proteobacteria	1462	Open in IMG/M
3300027873\|Ga0209814_10057567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1626	Open in IMG/M
3300027874\|Ga0209465_10056525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1885	Open in IMG/M
3300027875\|Ga0209283_10258721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1153	Open in IMG/M
3300027882\|Ga0209590_10297486	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300027909\|Ga0209382_10118478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3089	Open in IMG/M
3300027909\|Ga0209382_11427116	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300028710\|Ga0307322_10203967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300028878\|Ga0307278_10137408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
3300028878\|Ga0307278_10214705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	856	Open in IMG/M
3300028881\|Ga0307277_10000378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16155	Open in IMG/M
3300031543\|Ga0318516_10012986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4082	Open in IMG/M
3300031543\|Ga0318516_10055084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2173	Open in IMG/M
3300031543\|Ga0318516_10065596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2003	Open in IMG/M
3300031543\|Ga0318516_10755505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	550	Open in IMG/M
3300031544\|Ga0318534_10285789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	951	Open in IMG/M
3300031561\|Ga0318528_10007012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	4963	Open in IMG/M
3300031682\|Ga0318560_10190278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1094	Open in IMG/M
3300031719\|Ga0306917_10642555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	834	Open in IMG/M
3300031723\|Ga0318493_10608722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300031747\|Ga0318502_10002762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	6953	Open in IMG/M
3300031782\|Ga0318552_10630082	Not Available	547	Open in IMG/M
3300031795\|Ga0318557_10568105	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300031897\|Ga0318520_10823522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	583	Open in IMG/M
3300032039\|Ga0318559_10248527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	822	Open in IMG/M
3300032064\|Ga0318510_10454702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300032180\|Ga0307471_100069625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3027	Open in IMG/M
3300032261\|Ga0306920_100683467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1513	Open in IMG/M
3300033290\|Ga0318519_10127022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1402	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.58%
Host-Associated	Host-Associated	9.72%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.19%
Plants	Host-Associated → Plants	9.72%
Aquatic	Environmental → Aquatic	1.39%
Solid Waste	Engineered → Solid Waste	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.78%
Sediment	Environmental → Aquatic → Sediment	1.39%
Roots	Host-Associated → Plants → Roots	1.39%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.69%
Grass	Engineered → Solid Waste → Grass	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.28%
Loam	Environmental → Terrestrial → Soil → Loam	22.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.39%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.39%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.69%
Composting	Engineered → Solid Waste → Grass → Composting	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.69%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.69%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.08%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.39%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.39%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.39%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.39%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_02625862	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MKEPRASLPTFQRHHAIIAIIAILVAVALVLNYYLW*
AF_2010_repII_A01DRAFT_10446452	3300000580	Forest Soil	MKRPNPPLPGLQRHHVVIAIIALVVAVALVLNYYLW*
AF_2010_repII_A1DRAFT_100041623	3300000597	Forest Soil	MKRPRTASRFQRHHLVIAVIAIVVAVALVLNYYLW*
AF_2010_repII_A1DRAFT_100046293	3300000597	Forest Soil	MKRPNAPLPGLQRHHVVIAIIALVVAVALVLNYYLW*
AF_2010_repII_A1DRAFT_101303141	3300000597	Forest Soil	APAMNRPQPPLAGFQRHHVVIAIVAIVVAVALVLNYYLW*
AF_2010_repII_A001DRAFT_100033842	3300000793	Forest Soil	MKRPNAPLPGLQRHHVVXAIIALVVAVALVLNYYLW*
AF_2010_repII_A001DRAFT_100052664	3300000793	Forest Soil	MKEPRVSLPTFQRHHVIIAIIAILVAVALVLNYYLW*
AF_2010_repII_A001DRAFT_100851551	3300000793	Forest Soil	ACCQGAPAMNRPQPPLAGFQRHHVVIAIVAIVVAVALVLNYYLW*
Ga0066388_1065391531	3300005332	Tropical Forest Soil	ARAMNRPRTPLPRFQRHHLVIAVIAIVVAVALVLNYYLW*
Ga0066697_101509172	3300005540	Soil	MKRSQVPLPPFQRHHLIIATIAIVIAVALVLNYYLW*
Ga0066661_100344602	3300005554	Soil	MKRSQVPLPPFQRHHLVIATIAIVIAVALVLNYYLW*
Ga0066692_100462752	3300005555	Soil	VKRPSTPPPRLQRHHVVLAIIAVVVAVALVLNYYLW*
Ga0066692_108372182	3300005555	Soil	MKRPNTPLPPFQRHHIVIAVVAIVVAVALVLNYYLW*
Ga0066704_105791041	3300005557	Soil	MNRPQPPLPPFQRHHVVIAIIAILVAVALVLNYYLW*
Ga0066670_100070892	3300005560	Soil	MNRPQPPLAGFQRHHVVIAIVAIVVAVALVLNYYLW*
Ga0070762_106975792	3300005602	Soil	MKRPSTPPPRLQRHHVVLAIIPVVVAVALVLNYYLW*
Ga0066905_1001188103	3300005713	Tropical Forest Soil	MKRPDRPRPGLQRHHIVIAVIAVVVAVALVLNYYLW*
Ga0066905_1001283892	3300005713	Tropical Forest Soil	MKEPRASLPTFQRHHVIIAIIAILVAVALVLNYYLW*
Ga0066905_1001996853	3300005713	Tropical Forest Soil	MKRSQVPPFQRHHLVIATIAIVIAVALVLNYYLW*
Ga0066905_1004182693	3300005713	Tropical Forest Soil	MNRPRTPLPRFQRHHLVIAVIAIVVAVALVLNYYLW*
Ga0066905_1004849383	3300005713	Tropical Forest Soil	MNRPDEPTPYLQRHHIVAAIVAIVVAIALVLNYYLW*
Ga0066905_1005714953	3300005713	Tropical Forest Soil	MKRPDTSLPGLQRHHIVIAVIAIVVAVALVLNYYLW*
Ga0066905_1008398432	3300005713	Tropical Forest Soil	MKRPDTPLPGLKRHHIVIAVIAIVVAVALVLNYYLW*
Ga0066905_1008947013	3300005713	Tropical Forest Soil	MKRPNAPLPGLKRHHIVIAVIAIVVAGALVLNYYLW*
Ga0066905_1011004662	3300005713	Tropical Forest Soil	MTRPYAPPRLKRHHVVAAVVAIVVAVALVLNYYLW*
Ga0066905_1011256302	3300005713	Tropical Forest Soil	VKRPKAPLPGLQRHHIVIAIIAIVVAVALVLNYYLW*
Ga0066905_1018947471	3300005713	Tropical Forest Soil	MKRPDTPLPGLKRHHIVIAVIAIVVALALVLNYYLW*
Ga0066905_1020500912	3300005713	Tropical Forest Soil	MKRPNAPLPGLQRHHVVIAVIAIVVAVALVLNYYLW*
Ga0066903_1002295542	3300005764	Tropical Forest Soil	MKEPRVSLPTFQRHHAVIAIIAILVAVALVLNYYLW*
Ga0066903_1002774253	3300005764	Tropical Forest Soil	MKRPSTPPPRLQRHHVVLAIIAVVVAVAMVLNYYLW*
Ga0066903_1033418822	3300005764	Tropical Forest Soil	VKRPSTPLPRLQRHHVVIAIIAVVVAVALVLNYYLW*
Ga0066903_1037288612	3300005764	Tropical Forest Soil	MNRPEESTPYLQKHHIVAAVVAIVVAIALVLNYYLW*
Ga0066903_1037745332	3300005764	Tropical Forest Soil	MNRPQPPRAGFQRHHVVIAIVAIVVAVALVLNYYLW*
Ga0066903_1039328812	3300005764	Tropical Forest Soil	VKRPSTPPPRLQRHHVVIAIIAVVVAVALVLNYYLW*
Ga0066903_1046927092	3300005764	Tropical Forest Soil	VKRPNTPLPRLQRHHVVIALIAVVVAVALVLNYYLW*
Ga0066903_1066929261	3300005764	Tropical Forest Soil	MKRPGTPPPRLQRHHVVIAIIAVVVAVAMVLNYYLW*
Ga0066903_1076786742	3300005764	Tropical Forest Soil	MKRPSTPPPRLQRHHVVIAIIAVMVAVALVLNYYLW*
Ga0066903_1078971351	3300005764	Tropical Forest Soil	RQGACAMKRPDTPLPGLKRHHIVIAVIAIVVAVALVLNYYLW*
Ga0081455_100055053	3300005937	Tabebuia Heterophylla Rhizosphere	MNRPQAPLPPFQRHHVVIAIIAIVVAVALVLNYYLW*
Ga0081455_100371825	3300005937	Tabebuia Heterophylla Rhizosphere	MNRPEGSTPYLQKHHIVAAIVAIVVAIALVLNYYLW*
Ga0070717_100143653	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLRAPQGGLQRHHVVMAVVAIAVAIALVLNYYLW*
Ga0070717_101765622	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNHPRAPSIQRHHVVIAIVAIVVAVALVLNYYLW*
Ga0075365_101164552	3300006038	Populus Endosphere	MNRPEGPTPYLQKHHIVAAIIAIVVAIALVLNYYLW*
Ga0075365_105129361	3300006038	Populus Endosphere	MNRPDMPTSGFQRHHIVIAIIAIVVAVAMALNYYLW*
Ga0074060_100035842	3300006604	Soil	MKRPSTPPPRLQRHHVVLAIIAVVVAVALVLNYYLW*
Ga0079222_107737772	3300006755	Agricultural Soil	VKRPSTPPPRLQRHHVVIAIIAVVVALALVLNYYLW*
Ga0079220_103167973	3300006806	Agricultural Soil	MNRPQPPLAGFQRHHVVIAIVAIVVTVALVLNYYLW*
Ga0075431_1002593213	3300006847	Populus Rhizosphere	MNRPEGPTPYLQKHHIVAAIVAIVVAIALVLNYYLW*
Ga0075431_1018719121	3300006847	Populus Rhizosphere	MNRPVGPTPYLQKHHIVAAIVAIVVAIALVLNYYLW*
Ga0075433_109124753	3300006852	Populus Rhizosphere	MTRPHAPPRLKRHHVVAALVAIVVAVALVLNYYLW*
Ga0074063_100938872	3300006953	Soil	MKRPSTPPPRLQQHHVVLAIIAVVVAVALVLNYYLW*
Ga0099829_108299412	3300009038	Vadose Zone Soil	MTQPDTPSARFQRHHIVISIVAILVAVALVLNYYLW*
Ga0099828_103423832	3300009089	Vadose Zone Soil	MKKPDTPFPRYRLHHVVIAIVAIVAAVALVLNYYTW*
Ga0075418_123069581	3300009100	Populus Rhizosphere	MKRLRTPQGGLQRHHVVMAVVAIAVAIALVLNYYLW*
Ga0126374_100328933	3300009792	Tropical Forest Soil	MKRPDTPLPGLQRHHIVIAVIAIVVAVALVLNYYLW*
Ga0126374_112144951	3300009792	Tropical Forest Soil	MKHPQPPLAGFQRHHVVMAIIAIAVAVALVLNYYLW*
Ga0126380_105004472	3300010043	Tropical Forest Soil	MKRPNAPLPGLKRHHIVIAVIAIVVAVALVLNYYLW*
Ga0126380_111870552	3300010043	Tropical Forest Soil	MKRANAPLPGLKRHHIVIAVIAIVVAVALVLNYYLW*
Ga0126380_115038061	3300010043	Tropical Forest Soil	QGARAMKRPNAPLPGLKRHHIVIAVIAIVVAGALVLNYYLW*
Ga0126384_100794733	3300010046	Tropical Forest Soil	VKRPNTPLPGLQRHHVVIAIIAIVVAVALVLNYYLW*
Ga0126384_120317391	3300010046	Tropical Forest Soil	MKRPDTPLPGPQRHHIVIGVIAIVVAVALVLNYYLW*
Ga0126373_105920842	3300010048	Tropical Forest Soil	MKRPNAPLPGLQRHHVMIAIIALVIAVALVLNYYLW*
Ga0134080_105278932	3300010333	Grasslands Soil	MKRPSTPPPRLQRHHVVIAIVEVVVAVALVLNYYLW*
Ga0126376_104674243	3300010359	Tropical Forest Soil	MNRPQPPRAGFQRHHVVIAIIAIAVAVALVPNYYLW*
Ga0126372_105043083	3300010360	Tropical Forest Soil	MNRPQPPRAGFQRHHVVIAIIAIAVAVALVLNYYLW*
Ga0126372_112168862	3300010360	Tropical Forest Soil	VKRPDTPLPGLQRHHIVIAVIAIVVAVALVLNYYLW*
Ga0126378_106709692	3300010361	Tropical Forest Soil	MNRPRTPLPRLKRHHLVIAVIAIVVAVALVLNYYLW*
Ga0126378_128100992	3300010361	Tropical Forest Soil	MKRPNASLPGLQRHHVVIAIIAVVVAVAMVLNYYLW*
Ga0126379_102254332	3300010366	Tropical Forest Soil	MNRPQPPLVGFQRHHVVIAIVAIVVAVALVLNYYLW*
Ga0126379_130305722	3300010366	Tropical Forest Soil	MKRPNAPLTGLQRHHIVIAIVAIVVAVALVLNYYLW*
Ga0126381_1038089152	3300010376	Tropical Forest Soil	MKRPDTPLPGLQRHHIVIAIIAIVVAVALVLNYYLW*
Ga0134126_102878771	3300010396	Terrestrial Soil	RPRTPQGGLQRHHVVIAVVAIVVAIALVLNYYLW*
Ga0126383_114966282	3300010398	Tropical Forest Soil	MNRPEEPTAYLQKHHIVAAIVAIVVAIALVLNYYLW*
Ga0134123_115601621	3300010403	Terrestrial Soil	MKRLRTPQGGLQRHHAVMAVVAIAVAIALVLNYYLW*
Ga0134123_120335172	3300010403	Terrestrial Soil	RVRRNGGMSGLASHHVVIAVIAIVVAVALLANYYLW*
Ga0138505_1000113682	3300010999	Soil	MNRPRTPQGALQRHHVVIAVVAIVVAIALVLNYYLW*
Ga0120191_100214752	3300012022	Terrestrial	MNRTQAPLPPFQRHHVVIAIIAIMVAVALVLNYYLW*
Ga0137364_100095287	3300012198	Vadose Zone Soil	MNRPQPPLPRFQRHHVVIAIIAILVAVALVLNYYLW*
Ga0137365_1000341713	3300012201	Vadose Zone Soil	MTRPNTPLPPFQRHHIVIAVVAIVVAVALVLNYYLW*
Ga0137363_102111132	3300012202	Vadose Zone Soil	VKRPNTPLPGLQRHHIVIAVVAIVVAVALVLNYYLW*
Ga0137399_117412502	3300012203	Vadose Zone Soil	MNRPRTPQSGLQRHHVVIAVVAIVVAIAMVLNYYLW*
Ga0137374_100629813	3300012204	Vadose Zone Soil	MNRPQPPLPSFQRHHVVIAIIAILVAVALVLNYYLW*
Ga0137380_102175073	3300012206	Vadose Zone Soil	MKRSQVPPPFQRHHLVIATIAIVIAVALVLNYYLW*
Ga0137380_113321113	3300012206	Vadose Zone Soil	MTRPNTPLPRFQRHHIVIAAVAIVVAVALVLNYYLW*
Ga0137376_112778922	3300012208	Vadose Zone Soil	MNRPQPPLPSFQRHHVVIAIIAIVVAVALVLNYYLW*
Ga0137386_106164663	3300012351	Vadose Zone Soil	MKRSQVPPPFQRHHLIIVTIAIVIAVALVLNYYLW*
Ga0137366_104520093	3300012354	Vadose Zone Soil	MTRPNTPLPRFQRHHIVIAVVAIVVAVALVLNYYLW*
Ga0137368_100932093	3300012358	Vadose Zone Soil	MNRPRTPVPRFQRHHLVIAVIAIVVAVALVLNYYLW*
Ga0137396_107342532	3300012918	Vadose Zone Soil	MNHPRAPSIQRHHVAIAIVAIVVAVALVLNYYLW*
Ga0164308_105943912	3300012985	Soil	MNRPRTPRSGLQRHHVVIAVVAIVIAIALVMNYYLW*
Ga0164305_104538391	3300012989	Soil	PMNRPRTPQSGLQRHHVVIAVVAIVVAIALALNYYLW*
Ga0134081_100362611	3300014150	Grasslands Soil	RSQVPLPPFQRHHLVIATIAIVIAVALVLNYYLW*
Ga0134078_100041594	3300014157	Grasslands Soil	MRRSQVPLPPFQRHHLIIATIAIVIAVALVLNYYLW*
Ga0132258_133967642	3300015371	Arabidopsis Rhizosphere	VKRPSTPPPRLQRHHVVIAIIAVAVALALVLNYYLW*
Ga0132255_1060580931	3300015374	Arabidopsis Rhizosphere	GARAMNRPEGPTPYLQKHHIVAAIVAIVVAIALVLNYYLW*
Ga0182037_101994021	3300016404	Soil	VKRSSTPPPRLQRHHVVIAIIALVVAVALVLNYYL
Ga0184619_104702571	3300018061	Groundwater Sediment	MNRPDTSLPRFQRHHIVIAIIAIVVAVALVLNYYLW
Ga0184639_101432082	3300018082	Groundwater Sediment	VEAKGKGVMMQKPHTPLLRLQRHHIVISVVAIVVAVALMLNYYLW
Ga0066655_100927791	3300018431	Grasslands Soil	RAMKRSQVPLPPFQRHHLIIATIAIVIAVALVLNYYLW
Ga0066667_103032672	3300018433	Grasslands Soil	MNRPQPPLAGFQRHHVVIAIVAIVVAVALVLNYYLW
Ga0066662_101437532	3300018468	Grasslands Soil	VKRPSTPPPRLQRHHVVLAIIAVVVAVALVLNYYLW
Ga0066662_105581852	3300018468	Grasslands Soil	MNRPQPPLPPFQRHHVVIAIIAILVAVALVLNYYLW
Ga0210407_103997231	3300020579	Soil	MNRPRTPQSGLQRHHVVIAVVAIVVAIALALNYYLW
Ga0210408_100961972	3300021178	Soil	MKRLSTPPPRLQWHHVVLAIIAVVVAVALVLNYYLW
Ga0213872_104207532	3300021361	Rhizosphere	MKRPSTPPPRLQRHHVVIAIIAVVIAVALVLNYYLW
Ga0210384_114194722	3300021432	Soil	MKRLSTPPPRLQRHHVVLAIIAVVVAVALVLNYYLW
Ga0210402_104432182	3300021478	Soil	MKRPSTPPPRLQRHHVVLAIIAVVVAVALVLNYYLW
Ga0126371_104047043	3300021560	Tropical Forest Soil	MKEPRASLPTFQRHHVIIAIIAILVAVALVLNYYLW
Ga0126371_112662222	3300021560	Tropical Forest Soil	VKRPSTPPPRLQRHHVVIAIIAVVVAVALVLNYYLW
Ga0209468_10099882	3300026306	Soil	MKRSQVPLPPFQRHHLIIATIAIVIAVALVLNYYLW
Ga0257180_10225691	3300026354	Soil	ARAMNHPRAPSIQRHHVAIAIVAIVVAVALVLNYYLW
Ga0209729_10022221	3300027061	Forest Soil	GAHAMKKASTPPPRLQQHHVVLAIIAVVVAVALVLNYYLW
Ga0209522_10139162	3300027119	Forest Soil	GARAMKRLRTPQGGLQRHHVVMAVVAIAVAIALVLNYYLW
Ga0209003_10461122	3300027576	Forest Soil	MKKASTPPPRLQRHHVVLAIIAVVVAVALVLNYYLW
Ga0209466_10211693	3300027646	Tropical Forest Soil	MKRPNAPLPGLKRHHIVIAVIAIVVAVALVLNYYLW
Ga0209799_10201322	3300027654	Tropical Forest Soil	VKRPDTPLPGLQRHHIVIAVIAIVVAVALVLNYYLW
Ga0209814_100575673	3300027873	Populus Rhizosphere	MNRPQAPLPPFQRHHVVIAIIAIVVAVALVLNYYLW
Ga0209465_100565252	3300027874	Tropical Forest Soil	MKRPSTPVPRLQRHHVVIAIIALVVAVALVLNYYLW
Ga0209283_102587212	3300027875	Vadose Zone Soil	MKKPDTPFPRYRLHHVVIAIVAIVAAVALVLNYYTW
Ga0209590_102974862	3300027882	Vadose Zone Soil	VKRPNTPLPGLQRHHIVISIVAILVAVALVLNYYLW
Ga0209382_101184783	3300027909	Populus Rhizosphere	MNRPEGPTPYLQKHHIVAAIIAIVVAIALVLNYYLW
Ga0209382_114271161	3300027909	Populus Rhizosphere	MNRPEGPTPYLQKHHIVAAIVAIVVAIALVLNYYLW
Ga0307322_102039672	3300028710	Soil	MNRPRTPRSGLQRHHVVIAVVAIVIAIALVMNYYLW
Ga0307278_101374083	3300028878	Soil	MNRPDASLPRFQRHHIVIAVIAIVVAVAMALNYYLW
Ga0307278_102147052	3300028878	Soil	MNRPDTSLPRFQRHHIVIAVIAIVVAVAMALNYYLW
Ga0307277_1000037815	3300028881	Soil	MKRLRTPQGGLQRHHIVMAVVAIAVAIALVLNYYLW
Ga0318516_100129865	3300031543	Soil	MKRPSMPPPRLRRHHVVIAIIAVVIAVALVLNYYLW
Ga0318516_100550843	3300031543	Soil	MKRPNTPLPGLQRHHIVIAVIAIVVAVALVLNYYLW
Ga0318516_100655963	3300031543	Soil	MKRPDTPLPGLQRHHIVIAIIAIVVAVALVLNYYLW
Ga0318516_107555052	3300031543	Soil	VKRPSTPLPRLQRHHVVIAIIAVVVAVALVLNYYLW
Ga0318534_102857892	3300031544	Soil	VKRPTTPLPRLQRHHVVIAIIAVVVAVALVLNYYLW
Ga0318528_100070124	3300031561	Soil	VKRPTTPLPRLQRHHVVIAIIAVVVAVALALNYYLW
Ga0318560_101902783	3300031682	Soil	KRPDTPLPGLQRHHIVIAIIAIVVAVALVLNYYLW
Ga0306917_106425552	3300031719	Soil	AMKEPRASLPTFQRHHVIIAIIAILVAVALVLNYYLW
Ga0318493_106087221	3300031723	Soil	QGARAVKRSSTPPPRLQRHHVVIAIIAAVVAVALVLNYYLW
Ga0318502_100027621	3300031747	Soil	MKRPSMPPPRLRRHHVVIAIIAVVIAVALVLNYYL
Ga0318552_106300822	3300031782	Soil	MKRLSTPPPRLQQHHVVLAIIAVVVAVALVLNYYLW
Ga0318557_105681051	3300031795	Soil	CRQGARAMKRPDTPLPGLKRHHIVIAVIAIVVALALVLNYYLW
Ga0318520_108235222	3300031897	Soil	MKRPSTPLPRLQRHHVVIAIIAVVIAVALVLNYYLW
Ga0318559_102485271	3300032039	Soil	VKRSSTPPPRLQRHHVVIAIIAAVVAVALVLNYYLW
Ga0318510_104547021	3300032064	Soil	GARAVKRPTTPLPRLQRHHVVIAIIAVVVAVALVLNYYLW
Ga0307471_1000696251	3300032180	Hardwood Forest Soil	MTRPHAPPRLKRHHVVAALVAIVVAVALVLNYYLW
Ga0306920_1006834673	3300032261	Soil	MKRPSTPLPRLQRHHVVIAIIAVVVAVALVLNYYLW
Ga0318519_101270222	3300033290	Soil	VTRPTTPLPRLQRHHVVIAIIAVVVAVALALNYYLW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051102

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences