NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F051021

Metagenome Family F051021

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F051021
Family Type Metagenome
Number of Sequences 144
Average Sequence Length 38 residues
Representative Sequence MIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRT
Number of Associated Samples 132
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 57.04 %
% of genes near scaffold ends (potentially truncated) 63.19 %
% of genes from short scaffolds (< 2000 bps) 35.42 %
Associated GOLD sequencing projects 126
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.361 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(27.083 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.361 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 22.86%    β-sheet: 22.86%    Coil/Unstructured: 54.29%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF08483Obsolete Pfam Family 35.42
PF00665rve 20.83
PF01695IstB_IS21 9.03
PF00589Phage_integrase 1.39
PF08241Methyltransf_11 0.69
PF02416TatA_B_E 0.69
PF05935Arylsulfotrans 0.69
PF03544TonB_C 0.69
PF09250Prim-Pol 0.69
PF14690zf-ISL3 0.69
PF01979Amidohydro_1 0.69
PF13385Laminin_G_3 0.69
PF00196GerE 0.69
PF13517FG-GAP_3 0.69
PF05534HicB 0.69
PF08808RES 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 20.83
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 20.83
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 20.83
COG4584TransposaseMobilome: prophages, transposons [X] 20.83
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 9.03
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.69
COG1598Antitoxin component HicB of the HicAB toxin-antitoxin systemDefense mechanisms [V] 0.69
COG1826Twin-arginine protein secretion pathway components TatA and TatBIntracellular trafficking, secretion, and vesicular transport [U] 0.69
COG4226Predicted nuclease of the RNAse H fold, HicB familyGeneral function prediction only [R] 0.69
COG5654Predicted toxin component of a toxin-antitoxin system, contains RES domainDefense mechanisms [V] 0.69


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.36 %
UnclassifiedrootN/A7.64 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000597|AF_2010_repII_A1DRAFT_10006093All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus3309Open in IMG/M
3300000793|AF_2010_repII_A001DRAFT_10095607All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium628Open in IMG/M
3300001100|JGI12703J13194_104759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium674Open in IMG/M
3300001545|JGI12630J15595_10000775All Organisms → cellular organisms → Bacteria6575Open in IMG/M
3300001593|JGI12635J15846_10226541All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1216Open in IMG/M
3300005445|Ga0070708_100146822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2191Open in IMG/M
3300005559|Ga0066700_10571225All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium789Open in IMG/M
3300005602|Ga0070762_10339362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium955Open in IMG/M
3300005764|Ga0066903_102096440All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1088Open in IMG/M
3300005952|Ga0080026_10019779All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1632Open in IMG/M
3300006796|Ga0066665_10055795All Organisms → cellular organisms → Bacteria2743Open in IMG/M
3300009090|Ga0099827_10025982All Organisms → cellular organisms → Bacteria4157Open in IMG/M
3300009552|Ga0116138_1007584All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3977Open in IMG/M
3300009617|Ga0116123_1004704All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia5781Open in IMG/M
3300009623|Ga0116133_1003878All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3865Open in IMG/M
3300009639|Ga0116122_1010347All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3562Open in IMG/M
3300009762|Ga0116130_1007844All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4023Open in IMG/M
3300010048|Ga0126373_10353436All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1482Open in IMG/M
3300010048|Ga0126373_10555502All Organisms → cellular organisms → Bacteria → Acidobacteria1196Open in IMG/M
3300010048|Ga0126373_12164465All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300010325|Ga0134064_10159583All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium785Open in IMG/M
3300010361|Ga0126378_10524838All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1299Open in IMG/M
3300010376|Ga0126381_103927298All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300010398|Ga0126383_10080652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2840Open in IMG/M
3300011269|Ga0137392_10144103All Organisms → cellular organisms → Bacteria → Acidobacteria1918Open in IMG/M
3300012189|Ga0137388_10082814All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2710Open in IMG/M
3300012205|Ga0137362_10107083All Organisms → cellular organisms → Bacteria2360Open in IMG/M
3300012925|Ga0137419_10415869All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1053Open in IMG/M
3300014165|Ga0181523_10435823All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium728Open in IMG/M
3300014201|Ga0181537_10046997All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2932Open in IMG/M
3300014654|Ga0181525_10039053All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2771Open in IMG/M
3300016422|Ga0182039_10177034All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1680Open in IMG/M
3300017929|Ga0187849_1019609All Organisms → cellular organisms → Bacteria → Acidobacteria3856Open in IMG/M
3300017931|Ga0187877_1017733All Organisms → cellular organisms → Bacteria → Acidobacteria3975Open in IMG/M
3300017932|Ga0187814_10028155All Organisms → cellular organisms → Bacteria2097Open in IMG/M
3300017940|Ga0187853_10019230All Organisms → cellular organisms → Bacteria → Acidobacteria3826Open in IMG/M
3300017946|Ga0187879_10003939All Organisms → cellular organisms → Bacteria9945Open in IMG/M
3300017948|Ga0187847_10009554All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium6483Open in IMG/M
3300017955|Ga0187817_10023299All Organisms → cellular organisms → Bacteria → Acidobacteria3699Open in IMG/M
3300017961|Ga0187778_11030314All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300017998|Ga0187870_1018253All Organisms → cellular organisms → Bacteria → Acidobacteria3603Open in IMG/M
3300018015|Ga0187866_1015827All Organisms → cellular organisms → Bacteria → Acidobacteria4020Open in IMG/M
3300018023|Ga0187889_10024123All Organisms → cellular organisms → Bacteria → Acidobacteria3578Open in IMG/M
3300018026|Ga0187857_10028467All Organisms → cellular organisms → Bacteria → Acidobacteria3025Open in IMG/M
3300018037|Ga0187883_10058166Not Available2039Open in IMG/M
3300020581|Ga0210399_11454054All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300020582|Ga0210395_10041848All Organisms → cellular organisms → Bacteria → Acidobacteria3354Open in IMG/M
3300020583|Ga0210401_10032036All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus5009Open in IMG/M
3300021171|Ga0210405_10022603All Organisms → cellular organisms → Bacteria → Acidobacteria5081Open in IMG/M
3300021180|Ga0210396_10047828All Organisms → cellular organisms → Bacteria3924Open in IMG/M
3300021181|Ga0210388_10012951All Organisms → cellular organisms → Bacteria6657Open in IMG/M
3300021404|Ga0210389_10352041All Organisms → cellular organisms → Bacteria → Acidobacteria1156Open in IMG/M
3300021406|Ga0210386_10283311All Organisms → cellular organisms → Bacteria → Acidobacteria1418Open in IMG/M
3300021432|Ga0210384_10053671All Organisms → cellular organisms → Bacteria → Acidobacteria3652Open in IMG/M
3300021474|Ga0210390_10091888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2527Open in IMG/M
3300021560|Ga0126371_10151041All Organisms → cellular organisms → Bacteria2384Open in IMG/M
3300022557|Ga0212123_10113917All Organisms → cellular organisms → Bacteria2170Open in IMG/M
3300022557|Ga0212123_10200819All Organisms → cellular organisms → Bacteria → Acidobacteria1478Open in IMG/M
3300022733|Ga0224562_1007607All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium847Open in IMG/M
3300023259|Ga0224551_1001062All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus4621Open in IMG/M
3300023259|Ga0224551_1061424All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium656Open in IMG/M
3300025412|Ga0208194_1002414All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3694Open in IMG/M
3300025419|Ga0208036_1002222All Organisms → cellular organisms → Bacteria6994Open in IMG/M
3300025432|Ga0208821_1004887All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia4018Open in IMG/M
3300025439|Ga0208323_1005567All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3625Open in IMG/M
3300025444|Ga0208189_1005425All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3683Open in IMG/M
3300025453|Ga0208455_1004708All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3667Open in IMG/M
3300025454|Ga0208039_1005660All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3648Open in IMG/M
3300025460|Ga0208562_1005058All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3643Open in IMG/M
3300025473|Ga0208190_1004945All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3707Open in IMG/M
3300025477|Ga0208192_1007269All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3643Open in IMG/M
3300025480|Ga0208688_1006332All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3736Open in IMG/M
3300025501|Ga0208563_1008450All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3629Open in IMG/M
3300025506|Ga0208937_1004499All Organisms → cellular organisms → Bacteria → Acidobacteria4012Open in IMG/M
3300025612|Ga0208691_1006051All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3377Open in IMG/M
3300025922|Ga0207646_10050192All Organisms → cellular organisms → Bacteria → Acidobacteria3734Open in IMG/M
3300026469|Ga0257169_1000056All Organisms → cellular organisms → Bacteria3783Open in IMG/M
3300027545|Ga0209008_1037697All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1115Open in IMG/M
3300027590|Ga0209116_1003803All Organisms → cellular organisms → Bacteria → Acidobacteria3234Open in IMG/M
3300027590|Ga0209116_1126609All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300027629|Ga0209422_1001519All Organisms → cellular organisms → Bacteria → Acidobacteria5623Open in IMG/M
3300027671|Ga0209588_1213728All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300027825|Ga0209039_10018401All Organisms → cellular organisms → Bacteria → Acidobacteria3633Open in IMG/M
3300027846|Ga0209180_10018607All Organisms → cellular organisms → Bacteria → Acidobacteria3662Open in IMG/M
3300027875|Ga0209283_10024757All Organisms → cellular organisms → Bacteria → Acidobacteria3709Open in IMG/M
3300027884|Ga0209275_10798594All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium544Open in IMG/M
3300027903|Ga0209488_10092549All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2260Open in IMG/M
3300028759|Ga0302224_10007403All Organisms → cellular organisms → Bacteria4111Open in IMG/M
3300028776|Ga0302303_10038028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1938Open in IMG/M
3300028780|Ga0302225_10064120All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1808Open in IMG/M
3300028798|Ga0302222_10011725All Organisms → cellular organisms → Bacteria → Acidobacteria3612Open in IMG/M
3300028871|Ga0302230_10035952All Organisms → cellular organisms → Bacteria2162Open in IMG/M
3300029882|Ga0311368_10148441All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1920Open in IMG/M
3300029889|Ga0246001_1009127All Organisms → cellular organisms → Bacteria → Acidobacteria3636Open in IMG/M
3300029951|Ga0311371_10403833All Organisms → cellular organisms → Bacteria1857Open in IMG/M
3300030042|Ga0302300_1018460All Organisms → cellular organisms → Bacteria2631Open in IMG/M
3300030618|Ga0311354_10126729All Organisms → cellular organisms → Bacteria2817Open in IMG/M
3300031234|Ga0302325_10136110All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4453Open in IMG/M
3300031236|Ga0302324_100341636All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2268Open in IMG/M
3300031236|Ga0302324_102244122Not Available675Open in IMG/M
3300031545|Ga0318541_10018767All Organisms → cellular organisms → Bacteria → Acidobacteria3275Open in IMG/M
3300031564|Ga0318573_10018823All Organisms → cellular organisms → Bacteria → Acidobacteria3080Open in IMG/M
3300031668|Ga0318542_10009667All Organisms → cellular organisms → Bacteria → Acidobacteria3605Open in IMG/M
3300031679|Ga0318561_10017966All Organisms → cellular organisms → Bacteria → Acidobacteria3235Open in IMG/M
3300031680|Ga0318574_10778933All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300031715|Ga0307476_10255085All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1281Open in IMG/M
3300031719|Ga0306917_10022492All Organisms → cellular organisms → Bacteria → Acidobacteria3916Open in IMG/M
3300031751|Ga0318494_10330561All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium881Open in IMG/M
3300031754|Ga0307475_10047026All Organisms → cellular organisms → Bacteria → Acidobacteria3226Open in IMG/M
3300031763|Ga0318537_10153345All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium858Open in IMG/M
3300031764|Ga0318535_10013162All Organisms → cellular organisms → Bacteria3018Open in IMG/M
3300031768|Ga0318509_10013638All Organisms → cellular organisms → Bacteria → Acidobacteria3605Open in IMG/M
3300031770|Ga0318521_10015241All Organisms → cellular organisms → Bacteria → Acidobacteria3451Open in IMG/M
3300031771|Ga0318546_10046273All Organisms → cellular organisms → Bacteria2684Open in IMG/M
3300031821|Ga0318567_10856462All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300031833|Ga0310917_10025418All Organisms → cellular organisms → Bacteria → Acidobacteria3450Open in IMG/M
3300031890|Ga0306925_10407576All Organisms → cellular organisms → Bacteria → Acidobacteria1456Open in IMG/M
3300031890|Ga0306925_11307921All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300031912|Ga0306921_11294446All Organisms → cellular organisms → Bacteria → Acidobacteria807Open in IMG/M
3300031947|Ga0310909_10088875All Organisms → cellular organisms → Bacteria2463Open in IMG/M
3300031954|Ga0306926_10066219All Organisms → cellular organisms → Bacteria → Acidobacteria4360Open in IMG/M
3300031954|Ga0306926_10205867All Organisms → cellular organisms → Bacteria2441Open in IMG/M
3300031954|Ga0306926_10455338All Organisms → cellular organisms → Bacteria1576Open in IMG/M
3300031962|Ga0307479_10074747All Organisms → cellular organisms → Bacteria → Acidobacteria3277Open in IMG/M
3300032001|Ga0306922_10605746All Organisms → cellular organisms → Bacteria → Acidobacteria1160Open in IMG/M
3300032025|Ga0318507_10131407All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1062Open in IMG/M
3300032035|Ga0310911_10537761All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium678Open in IMG/M
3300032041|Ga0318549_10007814All Organisms → cellular organisms → Bacteria → Acidobacteria3604Open in IMG/M
3300032042|Ga0318545_10040804All Organisms → cellular organisms → Bacteria → Acidobacteria1549Open in IMG/M
3300032052|Ga0318506_10140820All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1052Open in IMG/M
3300032059|Ga0318533_11430505All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300032094|Ga0318540_10010866All Organisms → cellular organisms → Bacteria → Acidobacteria3551Open in IMG/M
3300032261|Ga0306920_100761709All Organisms → cellular organisms → Bacteria → Acidobacteria1423Open in IMG/M
3300032261|Ga0306920_101203707All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1094Open in IMG/M
3300033289|Ga0310914_10829343All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium823Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil25.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland13.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.72%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.72%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland6.94%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.25%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.86%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.86%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.08%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.08%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.39%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.39%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.39%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.39%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.39%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.39%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.69%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.69%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.69%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.69%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.69%
PeatEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat0.69%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300001100Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1EnvironmentalOpen in IMG/M
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009617Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100EnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009639Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40EnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018015Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022733Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3EnvironmentalOpen in IMG/M
3300023259Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24EnvironmentalOpen in IMG/M
3300025412Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025419Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025432Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025439Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025444Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025453Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025454Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025460Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025473Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025477Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025480Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025501Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025506Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300027545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027590Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028776Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028871Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029889Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cmEnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030042Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A1DRAFT_1000609343300000597Forest SoilMIATPASLRSDFIHIVGMVIYIAPESTNHITGIRSS
AF_2010_repII_A001DRAFT_1009560713300000793Forest SoilMIATPASLRSDFIHIVGMAIHIAPERTNHITGIRT
JGI12703J13194_10475913300001100Forest SoilMIVVPASLRSDFIHMAGMTIHIALESTIHIAGIRTNAA
JGI12630J15595_1000077513300001545Forest SoilMIEISASLRSDFIHIAGTAIHIAPECTIHITGIRSLPRHRS
JGI12635J15846_1022654113300001593Forest SoilMSGMIVTPASLRSDFIHMAGMTIHIALESTIHIAGIR
Ga0070708_10014682243300005445Corn, Switchgrass And Miscanthus RhizosphereLINVQVSGMIVIPASLRSDFIHVAGMTTHIALESTIHIAGIR
Ga0066700_1057122523300005559SoilVSGMIVIPASLRSDFIHTAGMTIHIALESTIHIVGIRIYDS*
Ga0070762_1033936213300005602SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRS*
Ga0066903_10209644023300005764Tropical Forest SoilMIAIPASLGSNFIHIAGMPIHIAPEYTIHIIGIRTHQDDQVSSA*
Ga0080026_1001977923300005952Permafrost SoilMIVIPASLRSDFIHMAGMTIHIALESSIHIVGIRSGRLL*
Ga0066665_1005579573300006796SoilMIVIPASLRSDFIHIAGMTIHIALESTIHIVGIRSSDA*
Ga0099827_1002598213300009090Vadose Zone SoilMSKVSGMIAIPASLRSDFIHIPGTPIHIALESTIH
Ga0116138_100758443300009552PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRS*
Ga0116123_100470423300009617PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRR*
Ga0116133_100387843300009623PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRNQ*
Ga0116122_101034713300009639PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRTWIG*
Ga0116130_100784453300009762PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRN*
Ga0126373_1035343613300010048Tropical Forest SoilMIATPASLRSDFIHIVGMAIYIAPESTNHITGIRT
Ga0126373_1055550213300010048Tropical Forest SoilATPASLRSDFIHIVGMAIYIAPESTNHITGIRTLAMN*
Ga0126373_1216446513300010048Tropical Forest SoilMVSGMIPIPASLRSDFIHIPGTLIHIALESTIHIIGISTP
Ga0134064_1015958313300010325Grasslands SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRTLGSGLS
Ga0126378_1052483833300010361Tropical Forest SoilMIATPASLRSDFIHIVGMAIYIAPESTNHITGIRT*
Ga0126381_10392729813300010376Tropical Forest SoilMIATPASLRSDSIHIVGMAIYIAPESTNHITGIRTSLVA
Ga0126383_1008065213300010398Tropical Forest SoilMIAIPASLGSNFIHIAGMSIHIAPEYTIHIIGIRKVC*
Ga0137392_1014410313300011269Vadose Zone SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRTFRRCESVAG*
Ga0137388_1008281433300012189Vadose Zone SoilMIVIPASLRSDFIHIDGMTIHIALESTIHIVGIRSHWQNLQE*
Ga0137362_1010708343300012205Vadose Zone SoilMIVIPASLRSDFIHIAGMTIHIALESTIHIVGIRSHWQNLQE*
Ga0137419_1041586913300012925Vadose Zone SoilMSKVSGMIAIPASLRSDFIHITGTPIHIALESTIHITGIRS
Ga0181523_1043582313300014165BogMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRI
Ga0181537_1004699723300014201BogMIVIPASLRSDFIHIVGMPIHIPLESTVHIAGIRTLRPARSRGR*
Ga0181525_1003905343300014654BogMPKGSGMIVIPASLRSDFIHIVGMPIHIPLESTVHIAGIR
Ga0182037_1063029433300016404SoilMVSGMIPIPASLRSDLIHIPGTLIHIALESTIHIVGIRTGAQSIV
Ga0182039_1017703413300016422SoilMVSGMIAIPASLRSDFIHIPGTLIHIALESTIHIVGIRIHPV
Ga0187849_101960913300017929PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRTRPRVH
Ga0187877_101773343300017931PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRTTRIR
Ga0187814_1002815543300017932Freshwater SedimentMIAIPASLRSDFIHIAGMTIHIALESTIHIIGIVSHQ
Ga0187853_1001923013300017940PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRTHPHLRAFT
Ga0187879_1000393913300017946PeatlandISKVSGMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRS
Ga0187847_10009554103300017948PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRN
Ga0187817_1002329943300017955Freshwater SedimentMIAIPASLRSDFIHIAGMTIHIALESTIHIIGIVT
Ga0187778_1103031413300017961Tropical PeatlandSTLSGMIAIPASLRSDFIHIAGMLIHIALESTIHIIGISRQV
Ga0187870_101825313300017998PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRIIDAEMTSAVIEN
Ga0187866_101582753300018015PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRTGFYKDV
Ga0187889_1002412343300018023PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRNQ
Ga0187857_1002846743300018026PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRSDLSNF
Ga0187883_1005816643300018037PeatlandRSDFIHMAGMTIHIALESTIHIVGIRTHPHLRAFT
Ga0210399_1145405423300020581SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRTR
Ga0210395_1004184813300020582SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRTT
Ga0210401_1003203613300020583SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRIAT
Ga0210405_1002260353300021171SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRSEP
Ga0210396_1004782843300021180SoilMIVIPASLSSDFIHMAGMTIHIALESTIHIAGIRNYTL
Ga0210388_1001295113300021181SoilMIVIPASLRSDFIHIAGMPIHIPLESIIHIAGIRSRPISR
Ga0210389_1035204133300021404SoilMIVIPASLSSDFIHMAGMTIHIALESTIHIAGIRNKPK
Ga0210386_1028331113300021406SoilMIVIPASLSSDFIHMAGMTIHIALESTIHIAGIRS
Ga0210384_1005367143300021432SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRTTRICV
Ga0210390_1009188853300021474SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRNRLKSAQA
Ga0126371_1015104113300021560Tropical Forest SoilMIATPASLRSDFIHIVGMAIYIAPESTNHITGIRNCATVCVS
Ga0212123_1011391713300022557Iron-Sulfur Acid SpringMIVIPASLRSDFIHMPGMTIHIALESTIHIAGIRNP
Ga0212123_1020081913300022557Iron-Sulfur Acid SpringMIVVPASLRSDFIHMAGITIHIALESTIHIVGIRN
Ga0224562_100760713300022733SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRT
Ga0224551_100106253300023259SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRTSLRRF
Ga0224551_106142423300023259SoilMIVIPASLSSAFIHMAGMTIHIALESTIHIAGIRSM
Ga0208194_100241413300025412PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRTIL
Ga0208036_1002222103300025419PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRRHATFA
Ga0208821_100488713300025432PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRTD
Ga0208323_100556713300025439PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRR
Ga0208189_100542513300025444PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRNLGFVVAVSFG
Ga0208455_100470843300025453PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRS
Ga0208039_100566013300025454PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRSMPHL
Ga0208562_100505813300025460PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRTRHHGGD
Ga0208190_100494513300025473PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRRL
Ga0208192_100726943300025477PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRNN
Ga0208688_100633253300025480PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRSEF
Ga0208563_100845043300025501PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRMSG
Ga0208937_100449913300025506PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRTIPT
Ga0208691_100605143300025612PeatlandMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRSYQGI
Ga0207646_1005019213300025922Corn, Switchgrass And Miscanthus RhizosphereMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRIPVCNAI
Ga0257169_100005643300026469SoilMIVIPASLRSDFIHIAGMPIHIPLESTIHIAGIRNFA
Ga0209008_103769723300027545Forest SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRSEGLADEF
Ga0209116_100380343300027590Forest SoilMSGMIVTPASLRSDFIHMAGMTIHIALESTIHIAGIRSLTAFLS
Ga0209116_112660913300027590Forest SoilMIVIPASLSSDFIHIAGMTIPIALESTIHITGIRKQETEPSQAGLRW
Ga0209422_100151953300027629Forest SoilMSGMIVVPASLRSDFIHMAGMTIHIALESTIHIAGIRSLSLIIVT
Ga0209588_121372833300027671Vadose Zone SoilMSKVSGMIAIPASLRSDFIHITGTPIHIALESTIHITG
Ga0209039_1001840123300027825Bog Forest SoilMIATPASLRSDFIHIAGTSIHIALESSIHIAGIAT
Ga0209180_1001860713300027846Vadose Zone SoilMIAIPASLRSDFIHIPGTPIHIALESTIHITGIRS
Ga0209283_1002475713300027875Vadose Zone SoilMIAIPASLRSDFIHIPGTPIHIALESTIHITGIRR
Ga0209275_1079859413300027884SoilMSGMIVIPASLRSDFIHMAGMTIHIALESTIHIAGIRNRR
Ga0209488_1009254943300027903Vadose Zone SoilMIVIPASLRSDFIHIAGMTIHIALESTIHIVGIRSHWQNLQE
Ga0302224_1000740313300028759PalsaMIVIPASLRSDFIHIVGMPIHIPLESTVHIAGIRTLT
Ga0302303_1003802843300028776PalsaMIVIPASLRSDFIHMPGMTIHIALESTIHIVGIRI
Ga0302225_1006412033300028780PalsaMPKGSGIIVIPASLRSDFIHIVGMPIHIPLESTVH
Ga0302222_1001172553300028798PalsaMIVIPASLRSDFIHMPGMTIHIALESTIHIVGIRILA
Ga0302230_1003595213300028871PalsaMIVIPASLRSDFIHIVGMPIHIPLESTVHIAGIRIGCGCAWTA
Ga0311368_1014844113300029882PalsaMIVIPASLRSDFIHMPGMTIHIALESTIHIVGIRTEPPAK
Ga0246001_100912713300029889PeatMIVVPASLRSDFIHMAGMTIHIALESTIHIVGIRSME
Ga0311363_1009063853300029922FenMPKGSGIIVIPASLRSDFIHIVGMPIHIPLESTVHIAGI
Ga0311352_1022939113300029944PalsaMPKGSGIIVIPASLRSDFIHIVGMPIHIPLESTVHIAGIRI
Ga0311371_1040383343300029951PalsaSLRSDFIHIVGMPIHIPLESTVHIAGIRIQLTAVLL
Ga0302300_101846013300030042PalsaMIVIPASLRSDFIHIVGMPIHIPLESTVHIAGIRR
Ga0302181_1002176443300030056PalsaMPKGSGIIVIPASLRSDFIHIVGMPIHIPLESTVHIAG
Ga0311354_1012672943300030618PalsaMIVIPASLRSDFIHMPGMTIHIALESTIHIVGIRSQSLKV
Ga0302325_1013611033300031234PalsaMIVIPESLRSDFIHMPGMNIHIALESTIHIVGIRTGHQTKPDRLP
Ga0302324_10034163623300031236PalsaMIVIPASLRSDFIHIAGMPIHIPLESTIHIAGIRSLTAHMLH
Ga0302324_10224412213300031236PalsaGMIVIPASLRSDFIHIVGMPIHIPLESTVHIAGIRTLTRSASEIQ
Ga0318541_1001876713300031545SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRKLR
Ga0318573_1001882313300031564SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRSQE
Ga0318542_1000966713300031668SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRSQQAVYRE
Ga0318561_1001796643300031679SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRTLAVSEL
Ga0318574_1077893313300031680SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRTE
Ga0307476_1025508533300031715Hardwood Forest SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRR
Ga0306917_1002249213300031719SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRSQQAV
Ga0318494_1033056123300031751SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRSLRTASKTDS
Ga0307475_1004702643300031754Hardwood Forest SoilMIVIPASLRSDFIHMAGMTIHIALESTIHIVGIRTCKLRCG
Ga0318537_1015334523300031763SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRN
Ga0318535_1001316213300031764SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRTQRFCPIFAQLG
Ga0318509_1001363813300031768SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRR
Ga0318521_1001524143300031770SoilMIATSASLRSDFIHIVGMAIHIAPECTNHITGIRRES
Ga0318546_1004627313300031771SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRSR
Ga0318567_1085646213300031821SoilMIATSASLRSDFIHIVGMAIHIAPECTNHITGIRTDQQVT
Ga0310917_1002541813300031833SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRRRRKK
Ga0306925_1040757613300031890SoilMIATSASLRSDFIHIVGMAIHIAPECTNHITGIRILR
Ga0306925_1130792133300031890SoilMIAIPASLRSDFIHIPGTLIHIALESTIHITGIGSWLG
Ga0306923_1047911813300031910SoilMIAIPAKLCSDFILIPGTAIHIALEHTIHIAGIPT
Ga0306921_1129444623300031912SoilMVSGMIPIPASPRSDLIHIPGTLIHIALESTIHIVGIRTGAQSIV
Ga0310912_1032145913300031941SoilMIAIPAKLCSDFILIPGTAIHIALEHTIHIAGIPTS
Ga0310916_1147718223300031942SoilMVLGMIPMPASLRSDFIHIPGTLIHIALESTIHIVGIRTGAQSIV
Ga0310909_1004156313300031947SoilMIAIPAKLCSDFILIPGTAIHIALEHTIHIAGIPNP
Ga0310909_1008887543300031947SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRTQSK
Ga0306926_1006621913300031954SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRS
Ga0306926_1020586743300031954SoilMIATSASLRSDFIHIVGMAIHIAPECTNHITGIRTDQQV
Ga0306926_1045533823300031954SoilMIAIPASLRSDFIHIPGTLIHIALESTIHITGIGS
Ga0306926_1079887533300031954SoilMIAIPAKLCSDFILIPGTAIHIALEHTIHIAGIPTSKE
Ga0307479_1007474743300031962Hardwood Forest SoilMIVIPASLPSDFIHMAGMTIHIALESTVHIVGIRS
Ga0306922_1060574633300032001SoilMIATPASLRSDFIHIVGMAIYIASETTNHIAGIRTQLLGECLQVVG
Ga0318507_1013140723300032025SoilMIATSASLRSDFIHIVGMAIYIAPESTNHITGIRRHRRETGLGGST
Ga0310911_1053776113300032035SoilMIAIPASLRSDFIHIPGTLIHIALESTIHITGIGSWL
Ga0318549_1000781413300032041SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRT
Ga0318545_1004080433300032042SoilMIATPASLRSDFIHIVGMAIHIAPECTNHITGIRTLR
Ga0318506_1014082013300032052SoilMLATPASLRSDFIHIVGMAIYIAPESTNHITGIRSKCAT
Ga0318533_1143050513300032059SoilMIATPASLRSDFIHIVGMAIYIASETTNHIAGIRSS
Ga0318540_1001086613300032094SoilMIATPASLRSDFIHIVGMAIHIAPERANHITGIRT
Ga0306920_10076170933300032261SoilMLATPASLRSDFIHIVGMAIYIAPESTNHITGIRSVAKVERVCKKF
Ga0306920_10120370723300032261SoilMIAIPASLRSDFIHIPGTLIHIALESTIHITGIGTVVSEM
Ga0310914_1082934313300033289SoilMPASLRSDFIHIPGTLIHIALESTIHIVGIRTGAQSI


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