Metagenome Family F051009

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F051009
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	56 residues
Representative Sequence	MDPNATWQMLCEYLRALHQNPENEERRANVILLLEALTRWLRRGGFPPMINQ
Number of Associated Samples	84
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.19 %
% of genes near scaffold ends (potentially truncated)	17.36 %
% of genes from short scaffolds (< 2000 bps)	93.06 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.278 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (34.028 % of family members)
Environment Ontology (ENVO)	Unclassified (32.639 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.750 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.00% β-sheet: 0.00% Coil/Unstructured: 55.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
a.24.10.3: Chemotaxis protein CheA P1 domain	d1tqga1	1tqg	0.80407
a.2.7.4: Methicillin resistance protein FemA probable tRNA-binding arm	d1lrza1	1lrz	0.79011
a.25.1.1: Ferritin	d4cvra_	4cvr	0.77835
a.26.1.3: Interferons/interleukin-10 (IL-10)	d1au1a_	1au1	0.77623
f.1.3.0: automated matches	d2qkga1	2qkg	0.77203

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF04002	RadC	51.39
PF02384	N6_Mtase	2.08
PF00072	Response_reg	0.69
PF11171	DUF2958	0.69
PF13730	HTH_36	0.69
PF00413	Peptidase_M10	0.69
PF00999	Na_H_Exchanger	0.69
PF02195	ParBc	0.69
PF11848	DUF3368	0.69
PF00578	AhpC-TSA	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	51.39
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.69
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.69
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.69
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.69
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.69
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.28 %
Unclassified	root	N/A	34.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.28 %
Unclassified	root	N/A	34.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.28 %
Unclassified	root	N/A	34.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.47 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	2.08 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	2.08 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.39 %
Elusimicrobia	phylum	All Organisms → cellular organisms → Bacteria → Elusimicrobia	1.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	2.08 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	2.08 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.08 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.39 %
unclassified Elusimicrobiota	no rank	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota	1.39 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	2.08 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	2.08 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.08 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	1.39 %
Elusimicrobia bacterium RIFOXYA2_FULL_39_19	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFOXYA2_FULL_39_19	1.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.08 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	2.08 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	2.08 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.39 %
Elusimicrobia bacterium RIFOXYA2_FULL_39_19	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFOXYA2_FULL_39_19	1.39 %
Selenomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales	0.69 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.08 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	2.08 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.39 %
Elusimicrobia bacterium RIFOXYA2_FULL_39_19	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFOXYA2_FULL_39_19	1.39 %
Selenomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae	0.69 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.08 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	2.08 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.39 %
Elusimicrobia bacterium RIFOXYA2_FULL_39_19	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFOXYA2_FULL_39_19	1.39 %
Selenomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas	0.69 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.08 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	2.08 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.39 %
Elusimicrobia bacterium RIFOXYA2_FULL_39_19	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFOXYA2_FULL_39_19	1.39 %
unclassified Selenomonas	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → unclassified Selenomonas	0.69 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.08 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	2.08 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.39 %
Elusimicrobia bacterium RIFOXYA2_FULL_39_19	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFOXYA2_FULL_39_19	1.39 %
Selenomonas sp. AE3005	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → unclassified Selenomonas → Selenomonas sp. AE3005	0.69 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0990886	Not Available	817	Open in IMG/M
3300000559\|F14TC_101605764	Not Available	560	Open in IMG/M
3300000858\|JGI10213J12805_10134678	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300000955\|JGI1027J12803_100570564	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300000955\|JGI1027J12803_102332418	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300000956\|JGI10216J12902_102210645	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300003324\|soilH2_10443701	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300004463\|Ga0063356_100244167	All Organisms → cellular organisms → Bacteria	2169	Open in IMG/M
3300004463\|Ga0063356_102504769	Not Available	791	Open in IMG/M
3300004463\|Ga0063356_103013474	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005178\|Ga0066688_10713570	Not Available	636	Open in IMG/M
3300005178\|Ga0066688_11014175	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005332\|Ga0066388_105279646	Not Available	655	Open in IMG/M
3300005332\|Ga0066388_108667058	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300005347\|Ga0070668_100473677	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300005439\|Ga0070711_101694747	Not Available	554	Open in IMG/M
3300005441\|Ga0070700_101567950	Not Available	562	Open in IMG/M
3300005471\|Ga0070698_100292725	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1559	Open in IMG/M
3300005549\|Ga0070704_101420115	Not Available	637	Open in IMG/M
3300005552\|Ga0066701_10713236	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005558\|Ga0066698_10431200	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300005764\|Ga0066903_102538987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300005764\|Ga0066903_108761480	Not Available	514	Open in IMG/M
3300005981\|Ga0081538_10271516	Not Available	634	Open in IMG/M
3300006049\|Ga0075417_10630902	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006058\|Ga0075432_10323953	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300006797\|Ga0066659_10113542	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300006800\|Ga0066660_10564599	Not Available	954	Open in IMG/M
3300006844\|Ga0075428_100022023	All Organisms → cellular organisms → Bacteria	7054	Open in IMG/M
3300006844\|Ga0075428_100565299	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300006844\|Ga0075428_100729962	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300006844\|Ga0075428_101335525	Not Available	753	Open in IMG/M
3300006844\|Ga0075428_102066493	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300006844\|Ga0075428_102114813	Not Available	582	Open in IMG/M
3300006844\|Ga0075428_102285818	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006845\|Ga0075421_100590435	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300006845\|Ga0075421_100622920	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300006845\|Ga0075421_100829689	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300006845\|Ga0075421_101005299	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300006845\|Ga0075421_102150869	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300006846\|Ga0075430_101005514	Not Available	687	Open in IMG/M
3300006847\|Ga0075431_100378870	Not Available	1419	Open in IMG/M
3300006847\|Ga0075431_100801842	Not Available	915	Open in IMG/M
3300006847\|Ga0075431_101584423	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300006847\|Ga0075431_101809434	Not Available	567	Open in IMG/M
3300006847\|Ga0075431_102229545	Not Available	502	Open in IMG/M
3300006852\|Ga0075433_10148754	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300006852\|Ga0075433_10789721	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300006853\|Ga0075420_100508970	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300006853\|Ga0075420_101144804	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300006880\|Ga0075429_101458523	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300006880\|Ga0075429_101730703	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300006904\|Ga0075424_101649173	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300006969\|Ga0075419_10601469	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300006969\|Ga0075419_10769623	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300007255\|Ga0099791_10040258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2073	Open in IMG/M
3300007255\|Ga0099791_10678657	Not Available	506	Open in IMG/M
3300009012\|Ga0066710_101046360	Not Available	1261	Open in IMG/M
3300009012\|Ga0066710_102699402	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300009012\|Ga0066710_103726693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300009012\|Ga0066710_103800598	Not Available	567	Open in IMG/M
3300009012\|Ga0066710_104135409	Not Available	542	Open in IMG/M
3300009089\|Ga0099828_10879304	Not Available	801	Open in IMG/M
3300009090\|Ga0099827_10340634	Not Available	1274	Open in IMG/M
3300009090\|Ga0099827_10653871	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300009090\|Ga0099827_10762859	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	837	Open in IMG/M
3300009090\|Ga0099827_10871227	Not Available	780	Open in IMG/M
3300009090\|Ga0099827_11500929	Not Available	587	Open in IMG/M
3300009094\|Ga0111539_10697951	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1181	Open in IMG/M
3300009094\|Ga0111539_11459160	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300009100\|Ga0075418_10352361	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300009100\|Ga0075418_10959733	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300009100\|Ga0075418_12072331	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300009137\|Ga0066709_100378841	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300009137\|Ga0066709_100729549	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300009137\|Ga0066709_102953173	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300009147\|Ga0114129_10229944	All Organisms → cellular organisms → Bacteria	2498	Open in IMG/M
3300009147\|Ga0114129_10879759	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300009147\|Ga0114129_11272371	Not Available	913	Open in IMG/M
3300009147\|Ga0114129_11346698	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFOXYA2_FULL_39_19	883	Open in IMG/M
3300009147\|Ga0114129_13179227	Not Available	535	Open in IMG/M
3300009156\|Ga0111538_10789894	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300009162\|Ga0075423_11142976	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300009162\|Ga0075423_12437225	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300009553\|Ga0105249_10246846	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300009553\|Ga0105249_11180712	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	836	Open in IMG/M
3300009553\|Ga0105249_11764327	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300009691\|Ga0114944_1276940	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300010047\|Ga0126382_11665620	Not Available	594	Open in IMG/M
3300010048\|Ga0126373_12818770	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	542	Open in IMG/M
3300010304\|Ga0134088_10197080	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300010323\|Ga0134086_10227949	Not Available	703	Open in IMG/M
3300010358\|Ga0126370_12021378	Not Available	564	Open in IMG/M
3300010358\|Ga0126370_12398262	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	524	Open in IMG/M
3300010362\|Ga0126377_10509301	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300012189\|Ga0137388_11501030	Not Available	611	Open in IMG/M
3300012189\|Ga0137388_11848420	Not Available	535	Open in IMG/M
3300012199\|Ga0137383_11280204	Not Available	524	Open in IMG/M
3300012202\|Ga0137363_10755201	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300012203\|Ga0137399_10513115	Not Available	1006	Open in IMG/M
3300012205\|Ga0137362_10239491	Not Available	1566	Open in IMG/M
3300012205\|Ga0137362_10723744	Not Available	855	Open in IMG/M
3300012205\|Ga0137362_11183489	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012206\|Ga0137380_11013576	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	709	Open in IMG/M
3300012207\|Ga0137381_10229297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1612	Open in IMG/M
3300012349\|Ga0137387_10988634	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012351\|Ga0137386_11130573	Not Available	551	Open in IMG/M
3300012359\|Ga0137385_10094987	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300012361\|Ga0137360_10188370	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300012361\|Ga0137360_10503670	Not Available	1031	Open in IMG/M
3300012361\|Ga0137360_10578038	Not Available	961	Open in IMG/M
3300012362\|Ga0137361_10318104	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300012362\|Ga0137361_10574857	Not Available	1033	Open in IMG/M
3300012362\|Ga0137361_10819614	Not Available	846	Open in IMG/M
3300012363\|Ga0137390_11671808	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	572	Open in IMG/M
3300012918\|Ga0137396_10028521	All Organisms → cellular organisms → Bacteria	3672	Open in IMG/M
3300012923\|Ga0137359_10268886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1520	Open in IMG/M
3300012925\|Ga0137419_10483658	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300012944\|Ga0137410_11534312	Not Available	582	Open in IMG/M
3300012971\|Ga0126369_10032626	All Organisms → cellular organisms → Bacteria	4302	Open in IMG/M
3300014268\|Ga0075309_1174390	Not Available	558	Open in IMG/M
3300015371\|Ga0132258_10907224	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300018431\|Ga0066655_10684552	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300022563\|Ga0212128_10102013	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300025972\|Ga0207668_10663490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → unclassified Selenomonas → Selenomonas sp. AE3005	914	Open in IMG/M
3300026035\|Ga0207703_11117092	Not Available	757	Open in IMG/M
3300027835\|Ga0209515_10477805	Not Available	649	Open in IMG/M
3300027835\|Ga0209515_10514944	Not Available	616	Open in IMG/M
3300027835\|Ga0209515_10602349	Not Available	551	Open in IMG/M
3300027873\|Ga0209814_10447621	Not Available	570	Open in IMG/M
3300027873\|Ga0209814_10529895	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300027903\|Ga0209488_10804998	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300027907\|Ga0207428_10755410	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300027909\|Ga0209382_10151231	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300027909\|Ga0209382_10780292	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300027909\|Ga0209382_10864638	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300027909\|Ga0209382_11163909	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300028536\|Ga0137415_10267881	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300028536\|Ga0137415_10695990	Not Available	829	Open in IMG/M
3300030006\|Ga0299907_10234105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1511	Open in IMG/M
3300031858\|Ga0310892_10245457	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300031908\|Ga0310900_11837999	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFOXYA2_FULL_39_19	516	Open in IMG/M
3300031954\|Ga0306926_12566260	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031995\|Ga0307409_100175301	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1892	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.64%
Host-Associated	Host-Associated	42.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.17%
Plants	Host-Associated → Plants	42.36%
Aquatic	Environmental → Aquatic	3.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.47%
Freshwater	Environmental → Aquatic → Freshwater	2.08%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.39%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	36.81%
Loam	Environmental → Terrestrial → Soil → Loam	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.08%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	36.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.78%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	2.08%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	34.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	2.08%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.08%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09908863	2228664022	Soil	MDPNATWQMLCDSLRALHQDPHDEELRANVIELLQALTRWLRSGGFPPTLG
F14TC_1016057642	3300000559	Soil	ATWQMLCDSLRALHQHPDDEEIRAHVLALLGALARWLRRGGFPPTLG*
JGI10213J12805_101346783	3300000858	Soil	MDPNATWQMLCEYLQALHQHPNDEEIRANVIELLGALSRWLRRGGFPPMINQDQQRSQEDA*
JGI1027J12803_1005705642	3300000955	Soil	MDPNATWQMLCEYLRALHQDPKDEEVRATAIELLQALTRWLRSGGFPPIPTLPQQPEEK*
JGI1027J12803_1023324183	3300000955	Soil	MDPNATWQMLCEYLRALHQDPHDEELRANAIELLQALTRWLRSGGFPPQLQ*
JGI10216J12902_1022106452	3300000956	Soil	MDPNATWQMLCDALHALYRDPQDEELRANVIELLQALTRWLRSGGFPPTLIHIYQQPEEHE*
soilH2_104437012	3300003324	Sugarcane Root And Bulk Soil	VDPNVTWQMLCECLQALHRDPQDEELSANAIELLQALTRWLRRGGFPPTLTCKERP*
Ga0063356_1002441673	3300004463	Arabidopsis Thaliana Rhizosphere	MDPNTSWQMLCDYLRALHQHPEDEELRANVLELLGALARWLRRGGFPPTLA*
Ga0063356_1025047693	3300004463	Arabidopsis Thaliana Rhizosphere	MDPNATWQMLCEYLLALNQHPDDEEIRANVVMHFEVLTRWLRRGGFPPKINQDHQRPEEEV*
Ga0063356_1030134741	3300004463	Arabidopsis Thaliana Rhizosphere	MDPNATWQMLCEYLLALHQHPEDEEIRANAIELLRALTRWLRR
Ga0066688_107135702	3300005178	Soil	MDPNATWQLLCEYLQVLHQEPHDEELRANVILLLEALTRWLRKGGFPPKINQYHWQPLEDR*
Ga0066688_110141752	3300005178	Soil	MDPNATWQMLCEYLWALHQNPEDEERRANVMLLLEALTRWLRRGGFPPMINQYHQQSQEDT*
Ga0066388_1052796462	3300005332	Tropical Forest Soil	HATWQMLCEYLRALHQNPEDEDRRANAILLFEALTRWLRRGGFPPAIDQTGRHG*
Ga0066388_1086670582	3300005332	Tropical Forest Soil	MDPNATWQMLCDYLQALHQDPQDEELRANAIELLRALTRWLHSGGFPPQLP*
Ga0070668_1004736772	3300005347	Switchgrass Rhizosphere	MDPNAAWQMLCDYLRALHQDPQDEELRANAIELLQALTRWLRKGGFPPTLG*
Ga0070711_1016947472	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDPNATWQMLCDYLQALNQHPHDEEIRANAIELLQALTRWLRRGGFAPMINQDLHRPQEEV*
Ga0070700_1015679501	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RAMDPNATWQMLCEYLRSLHQDPQDEALRANVIELLHALTRWLSSGGFPPQLTNRE*
Ga0070698_1002927251	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDPTATWLMLCEALKALEKQPDNEELRTHAITLLEVLTRWLRRGGFPPAVHQHPA*
Ga0070704_1014201152	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDPNATWQMLCDYLQALNQHPHDEEIRANAIELLQALTRWLRRGGFAPMIHQDLHRPQEEV*
Ga0066701_107132362	3300005552	Soil	VDPNATWQMLCEYLRTLHQNPDDEEIRANVIQLFETLTRWLRRGGFPPMINQH*
Ga0066698_104312002	3300005558	Soil	MDPNATWQMLCDYLRALHEEPHDEELRANVIVLLETLTRWLRRGGFPPMITQYQPPPQEEK*
Ga0066903_1025389873	3300005764	Tropical Forest Soil	MDPNATWQMLCDSLRALHRDPSDEERRANAIELLQALARWLRNGGFPPQLQ*
Ga0066903_1087614802	3300005764	Tropical Forest Soil	MDPNATWQMLCEYLRALHQEPQDEELRANAIELLQALTRWLRSGGFPPHLQ*
Ga0081538_102715162	3300005981	Tabebuia Heterophylla Rhizosphere	MDPQATWQMLCEYMRALRQNPSDDELRANVIMLLEALTRWLRTGGFPPTIG*
Ga0075417_106309022	3300006049	Populus Rhizosphere	MDPNATWQMLCDYLRALHHDPQDEELRANVIELLQALTRWLRRGGFPPIVNQDRQRPQENA*
Ga0075432_103239532	3300006058	Populus Rhizosphere	MDPNATWQMLCEYLAALHQHPDDEEIRANAIELLCALTRWLRRGGFAPLINQGRHQPEKEA*
Ga0066659_101135427	3300006797	Soil	WALHQNPEDEERRANVMLLLEALTRWLRRGGFPPMINQYHQQSQEDT*
Ga0066660_105645994	3300006800	Soil	MHIPRVSKKWESMDPNATWQMLCEYLRALHENPDDEEIRANVIELLQALTRWLRSGGFPPMINQYHQHPHGDI*
Ga0075428_1000220233	3300006844	Populus Rhizosphere	MDPNATWQMLCDSLRALHQHPQDEEIRANVLELLGALSRWLRRGGFPPTIDHTGRQA*
Ga0075428_1005652992	3300006844	Populus Rhizosphere	MDPNATWQMLYENLLALNQHPDEEEIRANVIELLEALTHWLRRGGFAPMINHDRQRP*
Ga0075428_1007299623	3300006844	Populus Rhizosphere	MDPNATWQMLCDYLRALHHDPQDEELRANVIELLQALTRWLRRGGFPPKINQDRQQLQEDA*
Ga0075428_1013355252	3300006844	Populus Rhizosphere	MDPNATWQMLCEYLRALHHNPHDEELRANAIELLQALTRWLRRGGFPPIIHQDQHRPQEDA*
Ga0075428_1020664932	3300006844	Populus Rhizosphere	MDPNATWQMLCEYLRALHQDPQDEELRANAIELLQALTRWLRSGGFPPKLP*
Ga0075428_1021148131	3300006844	Populus Rhizosphere	MDPNATWQMLCEYLRALNQHPHDEEIRANTLLHLEALTRWLRRGGYPPTLA*
Ga0075428_1022858182	3300006844	Populus Rhizosphere	MDPNATWQVLCEYLLALNQHPDNEEIRANAIELLQALTRWLRRGGFAPMIHQDQHRSQEEV*
Ga0075421_1005904353	3300006845	Populus Rhizosphere	MDPNATWQMLCDYLQALNQHPHDEEIRANAIELLQALTRWLRRGGFPPKINQDLHRPQEEV*
Ga0075421_1006229203	3300006845	Populus Rhizosphere	MDPNATWQMLCEYLQALHQDPQDEELRANAIELLQALTRWLRRGGFPPMIHQDQQRLQEDT*
Ga0075421_1008296893	3300006845	Populus Rhizosphere	MDPNATWQMLCEYLQALYQNPNDEEIRANAVMLLETLTRWLRRGGFAPMINQDLHRPQEEV*
Ga0075421_1010052992	3300006845	Populus Rhizosphere	MDPNATWQMLCDYLRALHHDPQDEELRANVIELLQALTRWLRRGGFP
Ga0075421_1021508692	3300006845	Populus Rhizosphere	MDPNATWQMLCEYLQALHQHPNDEEIRANALQLLAALTRWLRTGGFPPIVGKEQ*
Ga0075430_1010055142	3300006846	Populus Rhizosphere	MDPNATWQMLCDSLRALHQDPQDEELRANVIELLQALTRWLRRGGFPPTLG*
Ga0075431_1003788703	3300006847	Populus Rhizosphere	MDPNATWQMLCNYLRALKEHPEDEELRANVLELLGALARWLRRGGFPPTLA*
Ga0075431_1008018421	3300006847	Populus Rhizosphere	MDPNATWQMLCDSLRALHQHPQDEEIRANVLELLGALSRWLRRGGFPPTID
Ga0075431_1015844232	3300006847	Populus Rhizosphere	MDPNATWQMLCEYLLALHQNPQDEELRANAIELLQALTRWLRRGGFPPMINYDRHGPQEDA*
Ga0075431_1018094342	3300006847	Populus Rhizosphere	MDPNATWQMLCEYLRALNQNPHDEEIRANTLLHLEALTRWLRRGGFPP
Ga0075431_1022295452	3300006847	Populus Rhizosphere	MDPNATWQMLCDSLRALNQHPDEEEIRANVIELLQALTRWLRSGGFPPKLP*
Ga0075433_101487545	3300006852	Populus Rhizosphere	MDPNATWQMLCEYLLALHQNPQDEEIRANAVMLLETLTRWLRRGGFAPMIHQDVHRPQEEV*
Ga0075433_107897212	3300006852	Populus Rhizosphere	MDPNATWQMLCDYLQALHQNPNDEEIRANAIELLCALTRWLRRGGFAPLINQGRHQPEKEA*
Ga0075420_1005089703	3300006853	Populus Rhizosphere	MDPNATWQMLCDYLRALHHDPQDEELRANVIELLQALTRWLRRGGF
Ga0075420_1011448042	3300006853	Populus Rhizosphere	MDPNATWQMLCEYLRALNQHPHDEEIRANTLLHLEALTRWLRRGGFPPLIHQDQHRPQEDA*
Ga0075429_1014585232	3300006880	Populus Rhizosphere	MDPNATWQMLCAYLRALNQHPHDEEIRANTLLHLEALTRWLRRGGFPPLIHQDQHRPQEDA*
Ga0075429_1017307032	3300006880	Populus Rhizosphere	MDPNATWQMLCEYLRALHQDPQDEELRANAIELLQALTRWLRSGGFPPTLG*
Ga0075424_1016491732	3300006904	Populus Rhizosphere	MDPNATWQMLCEYLLALHQNPQDEELRANAIELLQALTRWLRRGGFAPMIHQDLHRPQEEV*
Ga0075419_106014692	3300006969	Populus Rhizosphere	MDPNATWQMLCEYLQALYQNPNDEEIRANAVMLLETLTRWLRRGGFAPMIHQDQHRPQEDA*
Ga0075419_107696231	3300006969	Populus Rhizosphere	MDPNATWQMLCEYLQALHQDPQDEELRANAIELLQALTRWLRRGGFPPKINEA*
Ga0099791_100402583	3300007255	Vadose Zone Soil	MDPNATWQMLCEYVRALHQNPDDEEIRANVILLIEALTRWLRRGGFPSTIDHTGR*
Ga0099791_106786572	3300007255	Vadose Zone Soil	MDPNATWQMLYEYLRALHQNSEDEEIRANVILLLEALTRWLRRGGFPPMINQYHQQSQEDT*
Ga0066710_1010463603	3300009012	Grasslands Soil	MDPTATWKMLCEYMQALHQNPTDEEIRANVILLLETLTRWLRRGGFPPRLE
Ga0066710_1026994022	3300009012	Grasslands Soil	MDPNATWQMLCEYLRALHQNPDDEDICVNVILLLEALTRWLRKGGFPPKINQYHQ
Ga0066710_1037266932	3300009012	Grasslands Soil	MDPNATWQMLCEYLRALHENPDDEEIRATVIELLEALTRWLRSGGFPPMINQCHEHPQEE
Ga0066710_1038005981	3300009012	Grasslands Soil	MDPTATWKMLCEALKALEKEPDDLELRAHAISLLEILTRRLRRGGFPPKNI
Ga0066710_1041354092	3300009012	Grasslands Soil	MDPNATWQMLCEYVRALHQNPDDEEIRANAILLLEALTRWLRRGGFPPMIHQYP
Ga0099828_108793042	3300009089	Vadose Zone Soil	MDPTATWRMLCAYLRALNQNPADEEIRANVIMLFEALTRWLRRGGFPPTIV*
Ga0099827_103406343	3300009090	Vadose Zone Soil	MDPNATWQMLCESLRALNQHPDDEERRANAIRLFEALTRWLRRGGFPPQLG*
Ga0099827_106538712	3300009090	Vadose Zone Soil	MDPTATWRMVCEALQALEKHPHDEELRTYAITLLEALTRWLRRGGFPPAIRQNPT*
Ga0099827_107628592	3300009090	Vadose Zone Soil	MDPTATWKMLCEALKALDRAPDDVELRAHAISLLEILTRWLRRGGFPPKNI*
Ga0099827_108712272	3300009090	Vadose Zone Soil	MDPNATWQMLCEYVRALHQNPDDEEIRTNVILLLEALTRWLRRGGFPPT
Ga0099827_115009293	3300009090	Vadose Zone Soil	CEYLRALHQHSDDEEIRANVIMLLEALTRWLRRGGFPPKIGG*
Ga0111539_106979513	3300009094	Populus Rhizosphere	MDPNATWQMLCEYLLALHQNPQDEELRANAIELLQALTRWLRRGGFPPK
Ga0111539_114591601	3300009094	Populus Rhizosphere	MDPNATWQMLCDYLQALHHDPQDEELRANTIALLQALTRWLRNGGFPPQVQ*
Ga0075418_103523613	3300009100	Populus Rhizosphere	MDPNATWQMLCAYLRALNQHPHDEEIRANTLLHLEALTRWLRRGGYPPTLA*
Ga0075418_109597332	3300009100	Populus Rhizosphere	MDPNATWQVLCEYLLALNQHPDNEEIRANAIELLQALTRWLRRGGFAPMIHQDLHRPQEEV*
Ga0075418_120723311	3300009100	Populus Rhizosphere	MDPNATWQMLCDYLQALNQHPHDEEIRANAIELLQALTRWLRRGGFPPMINQS*
Ga0066709_1003788417	3300009137	Grasslands Soil	MDPTAMWKMLCEALKALGRDPDDEELRAHAISLLEILTRRLRRGGFPPKNI*
Ga0066709_1007295492	3300009137	Grasslands Soil	MDPNATWQMLCEYLRALHHNPEDEEIRANVILLLEALTRWLQKGGFPPKINQYHWQPLEDR*
Ga0066709_1029531732	3300009137	Grasslands Soil	MDPNATWQMLCDYLRALHEEPHDEELRANVIVLLETLTRWLRRGGFPPMITQYQQPPEDT
Ga0114129_102299444	3300009147	Populus Rhizosphere	MDPNATWQMLCDYLRALHHDPQDEELRANVIELLQALTRWFRRGGFPPIVNQDRQRPQENA*
Ga0114129_108797592	3300009147	Populus Rhizosphere	MDPNATWQMLCEYLQALYQNPNDEEIRANAVMLLETLTRWLRRGGFPPKINQDLHRPQEEV*
Ga0114129_112723712	3300009147	Populus Rhizosphere	MDPNTTWRMLCEYLRALHHYPNDEEVRANVLELLGALSRWLRRGGFPPKLE*
Ga0114129_113466982	3300009147	Populus Rhizosphere	MDPNATWQMLCDFLRALHHDPQDEEVRANVIELLQALTRWLRRGGFPPMINQDQPRPQEEE*
Ga0114129_131792272	3300009147	Populus Rhizosphere	MDPNATWQMLCDYLRALHEHPDDEEIRANAIELLSTLARWLQRGGFPPTLP*
Ga0111538_107898942	3300009156	Populus Rhizosphere	MDPNATWQMLCEYLRALNQNPHDEEIRANTLLHLEALTRWLRRGGFPPLIHQDQHRPQEDA*
Ga0075423_111429762	3300009162	Populus Rhizosphere	MDPNATWQMLCEYLQALHQDPQDEELRANAIELLQALTRWLRRGGFAPMINQDQHRPREDG*
Ga0075423_124372252	3300009162	Populus Rhizosphere	MDPNATWQMLCEALQELEAHPDDIDIRERVVELLEALAAWLRKGGFPPTLIHTHRSEEHA
Ga0105249_102468464	3300009553	Switchgrass Rhizosphere	MDPNATWQMLCDYLQALNQQPHDEEIRANAIELLQALTRWLRRGGFAPMIHQDLHRSQEEV*
Ga0105249_111807123	3300009553	Switchgrass Rhizosphere	MDPNATWQMLCEYLLALHQNPQDEELRANAIELLQALTRWLRRGGFPPKINQDLHRPQEEV*
Ga0105249_117643272	3300009553	Switchgrass Rhizosphere	MDPNATWQMLCEYLQALHQDPQDEELRANAIELLQALTRWLRRGGFPP
Ga0114944_12769401	3300009691	Thermal Springs	MLCEYLRALHQHPNDEELRANVIMQLEALTRWLRKGGFPPTIG
Ga0126382_116656202	3300010047	Tropical Forest Soil	MDPNATWQMLCDSLRALHRDPSDEELRANAIELLQALARWLRNGGFPPQLQ*
Ga0126373_128187701	3300010048	Tropical Forest Soil	VDPNATWQMLCEYLRALHQEPKDEELRANAIELLRALTRWLRRGGFPPTLG*
Ga0134088_101970802	3300010304	Grasslands Soil	MDPNATWQMLCEYLQALHQNPEDEEICANVILLLEALTRWLQKGGFPPKINQYHWQPLEDR*
Ga0134086_102279492	3300010323	Grasslands Soil	MDPTATWKMLCEYLRALHQNPHDEEIRANVILLLEALTRWLRKGGFPPKINQYHWQPLEDR*
Ga0126370_120213781	3300010358	Tropical Forest Soil	MDPNATWQMLCDSLRALHKAPDDEELRAHVVMLLEVLTRWLRRGGFPPQIETAG*
Ga0126370_123982622	3300010358	Tropical Forest Soil	MDPNATWKMLCEYLRALHQDPHDEELRANAIELLQGLTRWLRRGGFPPMMNHDQQESQDGA*
Ga0126377_105093011	3300010362	Tropical Forest Soil	MDPNATWQMLCDYLRALHQNRDDEEIRANAVILLEALTRWLRRGGFPPMIQNDQQRPQENT*
Ga0137388_115010303	3300012189	Vadose Zone Soil	QMLCEYLQALHQNPEDEEIRTNVILLLEALTRWLRRGGFPPMIN*
Ga0137388_118484202	3300012189	Vadose Zone Soil	MDPNATWQMLCEYVRALQQNPEDEEIRANVILLIEALTRWLRRGGFPSTIDHTGR*
Ga0137383_112802041	3300012199	Vadose Zone Soil	LCEYLWALHQNPEDEERRANVMLLLEALTRWLRRGGFPPMINQYHQQSQEDT*
Ga0137363_107552012	3300012202	Vadose Zone Soil	MDPNATWQMLCEYLRALHQNPENEERRANVILLLEALTRWLRRGGFPPMINQYHQQSQEDT*
Ga0137399_105131154	3300012203	Vadose Zone Soil	MDPNATWQMLCEYLRALHHDPEDEEPRANAIELLQALTRWLRSGGFPPTIA*
Ga0137362_102394912	3300012205	Vadose Zone Soil	MDPNATWQMLCEYVRALHQNPDDEELRANVILLIEALTRWLRRGGFPSTIDHTGR*
Ga0137362_107237442	3300012205	Vadose Zone Soil	MDPNATWLMLCEYLRALHQNPEDEEIRVNVILLLEALTRWLRRGGFPPMSNPYPPHPQEDQ*
Ga0137362_111834892	3300012205	Vadose Zone Soil	MDPNATWQMLCEYLRALHQNPEDEERRANVILLLEALTRWLRRGGFPPMINQYHQQSPEDT*
Ga0137380_110135762	3300012206	Vadose Zone Soil	MDPTATWKMLCEALKALEKEPDDLELRAHAISLLEILTRWLRRGGFPPKNI*
Ga0137381_102292971	3300012207	Vadose Zone Soil	MDPTATWKMLCEYMQALHQNPTDEEIRANVILLLETLTRWLRRGGFPPRLE*
Ga0137387_109886342	3300012349	Vadose Zone Soil	MDPNATWQMLCEYLRALHQNPENEERRANVILLLEALTRWLRRGGFPPMINQYHQQSPEDT*
Ga0137386_111305732	3300012351	Vadose Zone Soil	MDPNATWQMLCEYVRALHQNPDDEEIRANVIQLLETLTRWLRRGGFPPMIHQYP*
Ga0137385_100949874	3300012359	Vadose Zone Soil	MDPNATWQMLCEYLWALHQNPEDEERRANVMLLLEALTRWLRRGGFPPMINQYHQQSPEDT*
Ga0137360_101883703	3300012361	Vadose Zone Soil	MDPNATWQMLCEYLRALHQNPENEERRANVILLLEALTRWLRRGGFPPMINQ*
Ga0137360_105036702	3300012361	Vadose Zone Soil	MDPNATWQMLCEYVRALHQNPDDEEIRTNVILLLEALTRWLRRGGFPPTITGGDDGKLPSIR*
Ga0137360_105780383	3300012361	Vadose Zone Soil	GNAIRGGCMDPTATWLMLCEYLRALHQNPEDEERRANVILLLEALTRWLRRGGFQPMINQ
Ga0137361_103181042	3300012362	Vadose Zone Soil	MDPNATWQMLCEYLRALHQNPEDEEIRANVILLLEALTRWLRRGGFPPMINQYHQQSQEDT*
Ga0137361_105748572	3300012362	Vadose Zone Soil	MDPNATWKMLCAYLRALHQNPEDEEIRANVIALLQALTRWLRRGGFPPMIHQYQGQPQEDQ*
Ga0137361_108196141	3300012362	Vadose Zone Soil	MDPNATWQMLCEYVRALHQNPDDEEIRTNVILLLEALTRWLRRGGFPPTITGGDDGKLP
Ga0137390_116718082	3300012363	Vadose Zone Soil	MDPNATWQMLCEYLRALHQNPDDKEIRANAILLLEALTRWLRRGGFPPKLG*
Ga0137396_100285216	3300012918	Vadose Zone Soil	MDPNATWQMLCEYLRALHHDPEDEEPRANAIELLQTLTRWLRSGGFPPTIA*
Ga0137359_102688861	3300012923	Vadose Zone Soil	MDPNATWQMLCEYVRALHQNPDDEEIRANVILLLEALTRWLRRGGFPPMINQYHQQSQEDT*
Ga0137419_104836582	3300012925	Vadose Zone Soil	MDPNATWQMLCEYLRALHHDPEDEEPRANAIELLQALTRWLRSGGFPPTIE*
Ga0137410_115343121	3300012944	Vadose Zone Soil	MDPNATWQMLCEYVRALHQNPDDEEIRTNVILLLEALTRWLRRGGFPPTITGGDDGKLPG
Ga0126369_100326264	3300012971	Tropical Forest Soil	MDPNATWQMLCDYLRALHQEPKDEELRANAVELLQALTRWLRSGGFPPQL*
Ga0075309_11743902	3300014268	Natural And Restored Wetlands	MDPNATWQMLRQSMQALHQNPSDDEVRANVIELLDALTHWIRAGGFPPIPTHE*
Ga0132258_109072242	3300015371	Arabidopsis Rhizosphere	MDPNATWQMLCDYLRALHQDPQDEELRTNAIELLQALTRWLRRGGFPPTIG*
Ga0066655_106845522	3300018431	Grasslands Soil	MDPNATWQMLCEYLRALHHNPEDEEIRANVILLLEALTRWLQKGGFPPKINQYHWQPLED
Ga0212128_101020131	3300022563	Thermal Springs	MDPNRAWRMLCEYLRALHQHPNDEELRANVIMQLEALTRWLRKGGFPPTIG
Ga0207668_106634902	3300025972	Switchgrass Rhizosphere	MDPNAAWQMLCDYLRALHQDPQDEELRANAIELLQALTRWLRKGGFPPTLG
Ga0207703_111170921	3300026035	Switchgrass Rhizosphere	QMLCDSLRALNQHPDDEEIRANVIALLGALARWLRRGGFPSKLK
Ga0209515_104778052	3300027835	Groundwater	MDPNAVWQTLQEALRALAEYPNDADLRANAIELLEILTDWLRRGGFPPIVQP
Ga0209515_105149441	3300027835	Groundwater	EMDPNATWHMLCEYLRALHQNPDDEEIRANVVMLFEALTRWLRRGGFPPKIP
Ga0209515_106023492	3300027835	Groundwater	MLYEYLLALNQNPDDEEIRANVIVLLEALTRWLRRGGFPPTIAKERIT
Ga0209814_104476211	3300027873	Populus Rhizosphere	RLMDPNATWQMLCDSLRALHQDPQDEELRANVIELLQALTRWLRRGGFPPTLG
Ga0209814_105298952	3300027873	Populus Rhizosphere	MDPNATWQMLCDYLRALHHDPQDEELRANVIELLQALTRWLRRGGFPPIVNQDRQRPQEN
Ga0209488_108049982	3300027903	Vadose Zone Soil	MDPNATWQMLCEYLRALHQHPNDEEIRANAMLHLEALTRWLRRGGFPPKLG
Ga0207428_107554102	3300027907	Populus Rhizosphere	MDPNATWQMLCEYLAALHQHPDDEEIRANAIELLCALTRWLRRGGFAPLINQGRHQPEKE
Ga0209382_101512312	3300027909	Populus Rhizosphere	MDPNATWQMLCDSLRALHQHPQDEEIRANVLELLGALSRWLRRGGFPPTIDHTGRQA
Ga0209382_107802923	3300027909	Populus Rhizosphere	MDPNATWQMLYENLLALNQHPDEEEIRANVIELLEALTHWLRRGGFAPMINHDRQRP
Ga0209382_108646383	3300027909	Populus Rhizosphere	MDPNATWQMLCEYLQALHQDPQDEELRANAIELLQALTRWLRRG
Ga0209382_111639091	3300027909	Populus Rhizosphere	MDPNATWQMLCEYLQALYQNPNDEEIRANAVMLLETLTRWLRRGGFAPMIHQDQHRSQEE
Ga0137415_102678814	3300028536	Vadose Zone Soil	MDPNATWQMLCDYLRALHQHPNDEDRRANAILLLEALTRWLRRGGFPPKLG
Ga0137415_106959901	3300028536	Vadose Zone Soil	MDPNATWQMLCEYLRALHHDPEDEEPRANAIELLQALTRWLRSGGFPPTIA
Ga0299907_102341052	3300030006	Soil	MDPQATWQMLCAYMQALHQNPSDEELRANVIMLLEALTRWLRAGGFPPTIG
Ga0310892_102454573	3300031858	Soil	MDPNATWQMLCEYLRALNQHPHDEEIRANTLLHLEALTRWLRRGGFPPLIHQDQHRPQEE
Ga0310900_118379992	3300031908	Soil	MDPNATWQMLCEYVQALHQDPDDTEIRANVVELLGALSRWLRSGGFPPTISSGGFDSAREEE
Ga0306926_125662602	3300031954	Soil	MDPNSTWQLLCESLRAFHRNPENKEIRANVIMLIATLTRWLRRGGFPPHITMICLEILPV
Ga0307409_1001753012	3300031995	Rhizosphere	MDPNATWQMLCDYLRALHQNPDDEEIRSNVVELLGALTRWLRRGGFPPHIG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051009

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences