Metagenome / Metatranscriptome Family F050941

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050941
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	42 residues
Representative Sequence	NKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Number of Associated Samples	80
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.69 %
% of genes near scaffold ends (potentially truncated)	97.92 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.583 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.528 % of family members)
Environment Ontology (ENVO)	Unclassified (77.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.472 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 0.00% Coil/Unstructured: 85.71%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF01963	TraB_PrgY_gumN	4.86
PF00589	Phage_integrase	2.78
PF04392	ABC_sub_bind	2.78
PF09351	DUF1993	2.78
PF00239	Resolvase	1.39
PF13289	SIR2_2	0.69
PF01266	DAO	0.69
PF12770	CHAT	0.69
PF00536	SAM_1	0.69
PF00328	His_Phos_2	0.69
PF13424	TPR_12	0.69
PF02518	HATPase_c	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG1916	Pheromone shutdown protein TraB, contains GTxH motif (function unknown)	Function unknown [S]	4.86
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.78
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.39
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.39

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
All Organisms	root	All Organisms	35.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
cellular organisms	root	All Organisms → cellular organisms	35.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.31 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.03 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.03 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	3.47 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.39 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.39 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.03 %
Methylocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella	1.39 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	1.39 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.39 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.69 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.69 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.03 %
Methylocella silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	1.39 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	1.39 %
Beijerinckia mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	0.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.69 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.69 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.03 %
Methylocella silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	1.39 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	1.39 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.69 %
Beijerinckia mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	0.69 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.69 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_107443759	Not Available	549	Open in IMG/M
3300005332\|Ga0066388_107681329	Not Available	540	Open in IMG/M
3300005713\|Ga0066905_100638163	Not Available	906	Open in IMG/M
3300005713\|Ga0066905_101277589	Not Available	659	Open in IMG/M
3300005764\|Ga0066903_100423028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2207	Open in IMG/M
3300005764\|Ga0066903_100516693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	2031	Open in IMG/M
3300005764\|Ga0066903_102299381	Not Available	1041	Open in IMG/M
3300005764\|Ga0066903_102981562	Not Available	917	Open in IMG/M
3300005764\|Ga0066903_106593564	Not Available	604	Open in IMG/M
3300005764\|Ga0066903_106987072	Not Available	585	Open in IMG/M
3300005764\|Ga0066903_107508373	Not Available	562	Open in IMG/M
3300005764\|Ga0066903_108127085	Not Available	537	Open in IMG/M
3300006938\|Ga0081245_1495351	Not Available	756	Open in IMG/M
3300009792\|Ga0126374_10199263	Not Available	1265	Open in IMG/M
3300009792\|Ga0126374_11620333	Not Available	535	Open in IMG/M
3300010043\|Ga0126380_11477798	Not Available	601	Open in IMG/M
3300010043\|Ga0126380_12048157	Not Available	525	Open in IMG/M
3300010047\|Ga0126382_12058068	Not Available	545	Open in IMG/M
3300010358\|Ga0126370_11212582	Not Available	702	Open in IMG/M
3300010359\|Ga0126376_11445123	Not Available	714	Open in IMG/M
3300010366\|Ga0126379_13807156	Not Available	505	Open in IMG/M
3300010376\|Ga0126381_100416097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1877	Open in IMG/M
3300010376\|Ga0126381_105020717	Not Available	507	Open in IMG/M
3300010398\|Ga0126383_10202371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1908	Open in IMG/M
3300010398\|Ga0126383_12102021	Not Available	652	Open in IMG/M
3300010398\|Ga0126383_13040731	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010398\|Ga0126383_13636953	Not Available	504	Open in IMG/M
3300012971\|Ga0126369_11264582	Not Available	828	Open in IMG/M
3300016270\|Ga0182036_10239896	Not Available	1351	Open in IMG/M
3300016294\|Ga0182041_10604186	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300016294\|Ga0182041_10955720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	773	Open in IMG/M
3300016294\|Ga0182041_11277269	Not Available	671	Open in IMG/M
3300016294\|Ga0182041_12202188	Not Available	515	Open in IMG/M
3300016319\|Ga0182033_10361132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1217	Open in IMG/M
3300016319\|Ga0182033_10723868	Not Available	873	Open in IMG/M
3300016319\|Ga0182033_11568617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	595	Open in IMG/M
3300016319\|Ga0182033_12138693	Not Available	511	Open in IMG/M
3300016341\|Ga0182035_10292602	Not Available	1332	Open in IMG/M
3300016341\|Ga0182035_11382338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300016357\|Ga0182032_11703280	Not Available	550	Open in IMG/M
3300016371\|Ga0182034_10822588	Not Available	796	Open in IMG/M
3300016387\|Ga0182040_10042022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2780	Open in IMG/M
3300016387\|Ga0182040_10899166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	734	Open in IMG/M
3300016387\|Ga0182040_11878883	Not Available	513	Open in IMG/M
3300016404\|Ga0182037_11211648	Not Available	663	Open in IMG/M
3300016422\|Ga0182039_10584245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	975	Open in IMG/M
3300016422\|Ga0182039_11917483	Not Available	544	Open in IMG/M
3300016445\|Ga0182038_10572586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	972	Open in IMG/M
3300016445\|Ga0182038_10860394	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300016445\|Ga0182038_11110074	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300021560\|Ga0126371_12373173	Not Available	641	Open in IMG/M
3300021560\|Ga0126371_12691400	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300021560\|Ga0126371_13940918	Not Available	500	Open in IMG/M
3300027874\|Ga0209465_10467295	Not Available	631	Open in IMG/M
3300031545\|Ga0318541_10442727	Not Available	726	Open in IMG/M
3300031561\|Ga0318528_10342725	Not Available	802	Open in IMG/M
3300031564\|Ga0318573_10289462	Not Available	876	Open in IMG/M
3300031572\|Ga0318515_10339611	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300031573\|Ga0310915_10268899	Not Available	1201	Open in IMG/M
3300031668\|Ga0318542_10434851	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300031680\|Ga0318574_10584873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300031681\|Ga0318572_10830081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	549	Open in IMG/M
3300031713\|Ga0318496_10466221	Not Available	698	Open in IMG/M
3300031719\|Ga0306917_10895110	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300031719\|Ga0306917_11355497	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300031724\|Ga0318500_10005373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4087	Open in IMG/M
3300031724\|Ga0318500_10676729	Not Available	525	Open in IMG/M
3300031736\|Ga0318501_10601679	Not Available	603	Open in IMG/M
3300031744\|Ga0306918_10722544	Not Available	779	Open in IMG/M
3300031747\|Ga0318502_10531644	Not Available	705	Open in IMG/M
3300031751\|Ga0318494_10819741	Not Available	545	Open in IMG/M
3300031763\|Ga0318537_10229372	Not Available	690	Open in IMG/M
3300031765\|Ga0318554_10623445	Not Available	607	Open in IMG/M
3300031771\|Ga0318546_10747717	Not Available	688	Open in IMG/M
3300031771\|Ga0318546_11297571	Not Available	511	Open in IMG/M
3300031777\|Ga0318543_10108413	Not Available	1198	Open in IMG/M
3300031781\|Ga0318547_10640977	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031781\|Ga0318547_10815297	Not Available	581	Open in IMG/M
3300031794\|Ga0318503_10066760	Not Available	1115	Open in IMG/M
3300031797\|Ga0318550_10159286	Not Available	1086	Open in IMG/M
3300031797\|Ga0318550_10161119	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300031797\|Ga0318550_10653493	Not Available	504	Open in IMG/M
3300031821\|Ga0318567_10202877	Not Available	1107	Open in IMG/M
3300031833\|Ga0310917_10451417	Not Available	874	Open in IMG/M
3300031833\|Ga0310917_10597108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	750	Open in IMG/M
3300031833\|Ga0310917_11160599	Not Available	514	Open in IMG/M
3300031833\|Ga0310917_11208557	Not Available	502	Open in IMG/M
3300031846\|Ga0318512_10754553	Not Available	500	Open in IMG/M
3300031890\|Ga0306925_10048223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4433	Open in IMG/M
3300031890\|Ga0306925_10542198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1234	Open in IMG/M
3300031890\|Ga0306925_10904415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300031893\|Ga0318536_10370480	Not Available	724	Open in IMG/M
3300031893\|Ga0318536_10711016	Not Available	500	Open in IMG/M
3300031897\|Ga0318520_10018179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3289	Open in IMG/M
3300031897\|Ga0318520_10487555	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300031897\|Ga0318520_10789668	Not Available	595	Open in IMG/M
3300031910\|Ga0306923_10262778	Not Available	1975	Open in IMG/M
3300031912\|Ga0306921_10088867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3566	Open in IMG/M
3300031912\|Ga0306921_10477347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1451	Open in IMG/M
3300031912\|Ga0306921_10507002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300031912\|Ga0306921_10592658	Not Available	1282	Open in IMG/M
3300031912\|Ga0306921_10701100	Not Available	1163	Open in IMG/M
3300031912\|Ga0306921_11113255	Not Available	884	Open in IMG/M
3300031941\|Ga0310912_10092228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2216	Open in IMG/M
3300031941\|Ga0310912_11412108	Not Available	525	Open in IMG/M
3300031942\|Ga0310916_10546978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	985	Open in IMG/M
3300031945\|Ga0310913_10398399	Not Available	976	Open in IMG/M
3300031946\|Ga0310910_10093042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2223	Open in IMG/M
3300031947\|Ga0310909_10492035	Not Available	1028	Open in IMG/M
3300031947\|Ga0310909_11003955	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300031954\|Ga0306926_10590289	Not Available	1357	Open in IMG/M
3300031954\|Ga0306926_11860721	Not Available	681	Open in IMG/M
3300031954\|Ga0306926_12261996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300031959\|Ga0318530_10377338	Not Available	587	Open in IMG/M
3300031981\|Ga0318531_10160844	Not Available	1008	Open in IMG/M
3300031981\|Ga0318531_10310143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300032001\|Ga0306922_10497691	Not Available	1299	Open in IMG/M
3300032025\|Ga0318507_10463983	Not Available	551	Open in IMG/M
3300032035\|Ga0310911_10178069	Not Available	1204	Open in IMG/M
3300032039\|Ga0318559_10252414	Not Available	816	Open in IMG/M
3300032039\|Ga0318559_10435422	Not Available	612	Open in IMG/M
3300032041\|Ga0318549_10115987	Not Available	1177	Open in IMG/M
3300032051\|Ga0318532_10071156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1210	Open in IMG/M
3300032052\|Ga0318506_10510989	Not Available	532	Open in IMG/M
3300032054\|Ga0318570_10337409	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300032054\|Ga0318570_10451712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300032055\|Ga0318575_10130450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1239	Open in IMG/M
3300032059\|Ga0318533_11318517	Not Available	527	Open in IMG/M
3300032060\|Ga0318505_10136073	Not Available	1132	Open in IMG/M
3300032065\|Ga0318513_10041482	Not Available	2032	Open in IMG/M
3300032065\|Ga0318513_10274874	Not Available	817	Open in IMG/M
3300032065\|Ga0318513_10411520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella silvestris	660	Open in IMG/M
3300032068\|Ga0318553_10663903	Not Available	545	Open in IMG/M
3300032076\|Ga0306924_10130164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2869	Open in IMG/M
3300032076\|Ga0306924_10658705	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300032076\|Ga0306924_11543961	Not Available	702	Open in IMG/M
3300032076\|Ga0306924_11799447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	638	Open in IMG/M
3300032094\|Ga0318540_10596455	Not Available	532	Open in IMG/M
3300032261\|Ga0306920_100297184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2405	Open in IMG/M
3300032261\|Ga0306920_101736014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	883	Open in IMG/M
3300033289\|Ga0310914_10739020	Not Available	881	Open in IMG/M
3300033289\|Ga0310914_11009392	Not Available	732	Open in IMG/M
3300033289\|Ga0310914_11106863	Not Available	693	Open in IMG/M
3300033289\|Ga0310914_11671594	Not Available	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.97%
Loam	Environmental → Terrestrial → Soil → Loam	9.03%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	77.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.03%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.03%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006938	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A001 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1074437591	3300005332	Tropical Forest Soil	DNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPNKNGGNTH*
Ga0066388_1076813291	3300005332	Tropical Forest Soil	DDNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKNDGNTH*
Ga0066905_1006381633	3300005713	Tropical Forest Soil	VNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH*
Ga0066905_1012775892	3300005713	Tropical Forest Soil	MHHSEVDDNKPLLKVVNEIVHVYETREQIEFRDQTPLLEINPSKNGGN*
Ga0066903_1004230284	3300005764	Tropical Forest Soil	LKVVNEIVHVYETREEIEFNDQTPLLEINPSKNGGNTH*
Ga0066903_1005166932	3300005764	Tropical Forest Soil	MLEPSGPDSNPITKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH*
Ga0066903_1022993814	3300005764	Tropical Forest Soil	LLKVVNEIVHVHETREQIEFNDQTPLLEINPSKNGGNTH*
Ga0066903_1029815621	3300005764	Tropical Forest Soil	VVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNTH*
Ga0066903_1065935642	3300005764	Tropical Forest Soil	VNEIVHVYETREQIEFKDQTPLLEINPSKNGGNTH*
Ga0066903_1069870721	3300005764	Tropical Forest Soil	SEVDDNKTLLKVVNEIVHVHETREQIEFNDQTPLLEINPSKNGGNTH*
Ga0066903_1075083731	3300005764	Tropical Forest Soil	DDNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNNH*
Ga0066903_1081270851	3300005764	Tropical Forest Soil	VDDNKPLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKKGGNTH*
Ga0081245_14953511	3300006938	Tropical Rainforest Soil	VVNEIVHVYETREQIEFNDQTPLLEINPSKNGDNTH*
Ga0126374_101992631	3300009792	Tropical Forest Soil	NEFVHVYETREQIEFKDQTPLLEINPSKNGGNTH*
Ga0126374_116203331	3300009792	Tropical Forest Soil	MHHSEVDDNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNNH*
Ga0126380_114777981	3300010043	Tropical Forest Soil	TLLKVVNEIVHVHETREQIEFNDQTPLLEINPSKNGGNTH*
Ga0126380_120481571	3300010043	Tropical Forest Soil	LKVVNEIVHVHETREQIEFKDQTPLLEINPGKNGGDTH*
Ga0126382_120580681	3300010047	Tropical Forest Soil	NEIVHVYETREQIEFKDQTPLLEINPSKNGGNTH*
Ga0126370_112125821	3300010358	Tropical Forest Soil	LKVVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNTH*
Ga0126376_114451232	3300010359	Tropical Forest Soil	GGTLLKVVNEIVHVYETREQIEFKDQTPLLEINPNKNGGNTH*
Ga0126379_138071562	3300010366	Tropical Forest Soil	VDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPTKNGGNTH*
Ga0126381_1004160971	3300010376	Tropical Forest Soil	KVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGDTH*
Ga0126381_1050207171	3300010376	Tropical Forest Soil	KPLLKVVNEIVHVYETREEIEFNDQTPLLEVNPTKNGGNTH*
Ga0126383_102023713	3300010398	Tropical Forest Soil	MHHSEVDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH*
Ga0126383_121020211	3300010398	Tropical Forest Soil	LEHSGPDSEPITKVVNEIVHVYETREQIEFNDQTPLLEINPGKNGGNTH*
Ga0126383_130407312	3300010398	Tropical Forest Soil	LEHSGPDSEPITKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGDTH*
Ga0126383_136369532	3300010398	Tropical Forest Soil	LKVVNEIVHVHETREQIEFNDQTPLLEINPSKNGGNTH*
Ga0126369_112645821	3300012971	Tropical Forest Soil	TAAPTASKPITKVVNEIVHVYETRGQIEFKDQTPLLEINPSKEGGNTH*
Ga0182036_102398962	3300016270	Soil	KVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0182041_106041861	3300016294	Soil	NKTLLKVVNEIVHVYETREQIEFNDQTPLLAINPSKNGGNTH
Ga0182041_109557202	3300016294	Soil	HSEVDDNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKKGGNTH
Ga0182041_112772691	3300016294	Soil	VDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPIKNGGNTH
Ga0182041_122021882	3300016294	Soil	VNEIVHVHETREQIEFNDQTPLLEINPSKNGGNTH
Ga0182033_103611321	3300016319	Soil	LLKVVNEIVHVYETREQIEFKDQTPLLEINPSKKGGNTH
Ga0182033_107238681	3300016319	Soil	MHHSEVDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0182033_115686173	3300016319	Soil	DDNKTLLKVVNEIVHVYETREQIEFNDQTPLLAINPSKNGGNTH
Ga0182033_121386933	3300016319	Soil	PKEINEVDGNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0182035_102926024	3300016341	Soil	EVDGNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0182035_113823382	3300016341	Soil	VDDNKTLLKVVNEIVHVYETREQIEFKDQTPLLEIDPSKNGGNTH
Ga0182032_117032801	3300016357	Soil	VNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0182034_108225882	3300016371	Soil	DGNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0182040_100420221	3300016387	Soil	EVDDNKTLLKVVNEIVHVYETREQIEFNDQAPLLEINPSKNGGNTH
Ga0182040_108991661	3300016387	Soil	DNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKKGGNTH
Ga0182040_118788831	3300016387	Soil	KVVNEIVHVYETREQIEFNDQTPLLEINPIKNGGNTH
Ga0182037_112116481	3300016404	Soil	VEDNKPLLKVVNEIVHVHETREQIEFKDQTPLLEINPSKNGGNTH
Ga0182039_105842453	3300016422	Soil	TLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKKGGNTH
Ga0182039_119174831	3300016422	Soil	LKVVNEIVHVYETREQIEFNDQTPLLEIDPSKNGGNTH
Ga0182038_105725861	3300016445	Soil	DDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGDNTH
Ga0182038_108603942	3300016445	Soil	LLKVVNEIVHVHETREQIEFKDQTPLLEINPSKTGGNTH
Ga0182038_111100742	3300016445	Soil	VEDNKPLLKVVNEIVHVHETREQIEFKDQTPLLGINPSKNGGNTH
Ga0126371_123731732	3300021560	Tropical Forest Soil	VVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNNH
Ga0126371_126914001	3300021560	Tropical Forest Soil	PLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNTH
Ga0126371_139409181	3300021560	Tropical Forest Soil	DDNKTLLKVVNEIVHVHETREPIEFNDQTPLLEINPSKNGGNTH
Ga0209465_104672951	3300027874	Tropical Forest Soil	HHSEVDDNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNNH
Ga0318541_104427271	3300031545	Soil	LKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0318528_103427251	3300031561	Soil	HVDVNDGGTLLKVVNEIVHVHETREQIEFNDQTPLLEVNPTKNGGNTH
Ga0318573_102894621	3300031564	Soil	HHSEVDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTQ
Ga0318515_103396112	3300031572	Soil	PDSEPITKVVNEIVHVYETREQIKFNDQTPLLEINPSKNGGNTH
Ga0310915_102688994	3300031573	Soil	HSEVDDNKPLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNTH
Ga0318542_104348511	3300031668	Soil	VVNEIVHVHETREQIEFKDQTPLLEINPSKNGGNTH
Ga0318574_105848731	3300031680	Soil	DNKTLLKVVNEIVHVYETREQIEFKDQTPLLEIDPSKNGGNTH
Ga0318572_108300812	3300031681	Soil	LKVVNEIVHVYETREEIEFNDQTPLLEINPSKKGGNTH
Ga0318496_104662211	3300031713	Soil	TLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0306917_108951102	3300031719	Soil	MHHSEVDDNKPLLKVVNEIVHVHETREQIEFKDQTPLLEINPSKNGGNTH
Ga0306917_113554972	3300031719	Soil	QPITKVVNEIVHVYETREQIEFNDQTPLLAINPSKNGGNTH
Ga0318500_100053731	3300031724	Soil	ADNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKKGGNTH
Ga0318500_106767291	3300031724	Soil	DNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKKGGKTH
Ga0318501_106016792	3300031736	Soil	KTLLKVVNEIVHVYETREQIEFKDQTPLLEIDPSKNGGNTH
Ga0306918_107225441	3300031744	Soil	DDNKPLLKVVNEIVHVYETREEIEFRDQTPLLEINPSKNGGNTH
Ga0318502_105316443	3300031747	Soil	DGNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0318494_108197411	3300031751	Soil	VVNEIVHVYETREQIEFKDQTPLLEIDPSKNGGNTH
Ga0318537_102293722	3300031763	Soil	DDNKTLLKVVNEIVHVYETREEIEFKDQTPLLEINPSKNGGNTH
Ga0318554_106234451	3300031765	Soil	NKTLLKVVNEIVHVHETREQIEFNDQTPLLEINPSKNGGNTH
Ga0318546_107477172	3300031771	Soil	TPLKVVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNTH
Ga0318546_112975711	3300031771	Soil	VDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTQ
Ga0318543_101084131	3300031777	Soil	VDGNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0318547_106409771	3300031781	Soil	VVNEIVHVYETREQIKFNDQTPLLEINPSKNGGNTH
Ga0318547_108152971	3300031781	Soil	NKTLLKVVNEIVHVYETREQIEFKDQTPLLEIDPSKNGGNTH
Ga0318503_100667603	3300031794	Soil	KTPLKVVNEIVHVYETREQIEFNDQTPLLEINPSKKGGNTH
Ga0318550_101592863	3300031797	Soil	HSEVDGNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKKGGNTH
Ga0318550_101611191	3300031797	Soil	PITKVVNEIVHVYETREQIKFNDQTPLLEINPSKNGGNTH
Ga0318550_106534931	3300031797	Soil	LKVVNEIVHVHETREQIELNDQTPLLEINPSKNGGNTH
Ga0318567_102028771	3300031821	Soil	DGNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKKGGNTH
Ga0310917_104514171	3300031833	Soil	DDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0310917_105971083	3300031833	Soil	TKVVNEIVRVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0310917_111605991	3300031833	Soil	PLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGDNTH
Ga0310917_112085571	3300031833	Soil	EVDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTQ
Ga0318512_107545531	3300031846	Soil	IIKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTY
Ga0306925_100482231	3300031890	Soil	SADNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKKGGNTH
Ga0306925_105421981	3300031890	Soil	VVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0306925_109044151	3300031890	Soil	LLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTQ
Ga0318536_103704803	3300031893	Soil	LKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0318536_107110161	3300031893	Soil	MHHSEVDDNKTLLKVVNEIVHVYETREQIEFKDQTPLLEIDPSKNGGNTH
Ga0318520_100181793	3300031897	Soil	KTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0318520_104875552	3300031897	Soil	VDDNKTLLKVVNEIVHVHETREQIELNDQTPLLEINPSKNGGNTH
Ga0318520_107896681	3300031897	Soil	HHSEVDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0306923_102627783	3300031910	Soil	MHHSEVDDNKTLLKVVNEIVHVHETREQIEFKDQTPLLEINPSKNGGNTH
Ga0306921_100888671	3300031912	Soil	EMHRSEVDDNKQLLKVVNEIVHVHETREQIEFKDQTPLLEINPSKTGGNTH
Ga0306921_104773473	3300031912	Soil	HSEVDDNRTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0306921_105070023	3300031912	Soil	KVVNEIVHVYETREQIEFKDQTPLLEINPSKNGDNTH
Ga0306921_105926581	3300031912	Soil	EVDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKKGGNTH
Ga0306921_107011002	3300031912	Soil	EDNKPLLKVVNEIVHVYETLEEIEFRDQTPLLEINPSKNGGNTH
Ga0306921_111132551	3300031912	Soil	DDNKTLLKVVNEIVHVHETREQIEFNDQTPLLEINPSKNGGNTH
Ga0310912_100922281	3300031941	Soil	CWCESADNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKKGGNTH
Ga0310912_114121081	3300031941	Soil	SEVDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKKGGKTH
Ga0310916_105469781	3300031942	Soil	LLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGDNTH
Ga0310913_103983991	3300031945	Soil	VVNEIVHVYETREQIEFNDQTPLLEINPSKKGGKTH
Ga0310910_100930421	3300031946	Soil	CESADNKTLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKKGGNTH
Ga0310909_104920353	3300031947	Soil	EVDGNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0310909_110039551	3300031947	Soil	LKVVNEIVHVYETREQIEFNDQTPLLAINPSKNGGNTH
Ga0306926_105902893	3300031954	Soil	VDVNDGGTLLKVVNEIVHVHETREQIEFKDQTPLLEINPSKNGGNTH
Ga0306926_118607213	3300031954	Soil	KTLLKVVNEIVHVHETREQIELNDQTPLLEINPRKNGGNTH
Ga0306926_122619962	3300031954	Soil	EMHHSEVDENKPLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKKGGDTH
Ga0318530_103773383	3300031959	Soil	VVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0318531_101608442	3300031981	Soil	TLLKVVNEIVHVYKTREQIEFNDQTPLLEINPSKNGGNTH
Ga0318531_103101431	3300031981	Soil	HHSEVDDNKTLLKVVNEIVHVHETREQIEFNDQTPLLEINPSKNGGNTH
Ga0306922_104976911	3300032001	Soil	TLLKVVNEIVHVHETREQIEFKDQTPLLEINPSKNGGNTH
Ga0318507_104639832	3300032025	Soil	DDNKTLLKVVNEIVHVYETREQIEFKDQTPLLEIDPSKNGGNTH
Ga0310911_101780693	3300032035	Soil	KTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0318559_102524142	3300032039	Soil	NKTPLKVVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNTH
Ga0318559_104354221	3300032039	Soil	GNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTY
Ga0318549_101159872	3300032041	Soil	VNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0318532_100711562	3300032051	Soil	VNEIVRVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0318506_105109891	3300032052	Soil	LEHSGPDGEPIIKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTY
Ga0318570_103374091	3300032054	Soil	EPITKVVNEIVHVYETREQIKFNDQTPLLEINPSKNGGNTH
Ga0318570_104517121	3300032054	Soil	NKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0318575_101304503	3300032055	Soil	SEVDDNKTPLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0318533_113185171	3300032059	Soil	EMHHSEVDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNDGNTH
Ga0318505_101360731	3300032060	Soil	DNKPLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKKGGNTH
Ga0318513_100414821	3300032065	Soil	VNEIVHVYETREQIEFKDQTPLLEINPSKKGGNTH
Ga0318513_102748742	3300032065	Soil	NKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNNH
Ga0318513_104115202	3300032065	Soil	SEVDDNKTLLKVVNEIVHVYETREQIEFNDQIPLLEINPSKNGGNTQ
Ga0318553_106639031	3300032068	Soil	TKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0306924_101301646	3300032076	Soil	VDDNKTLLKVVNEIVHVHETREQIEFNDQTPLLESNPSKNGGNTH
Ga0306924_106587052	3300032076	Soil	LLKVVNEIVHVHETREQIEFKDQTPLLEINPSKNGGNTH
Ga0306924_115439612	3300032076	Soil	VVNEFVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0306924_117994472	3300032076	Soil	VVNEIVHVHETREQIELNDQTPLLEINPSKNGGNTH
Ga0318540_105964551	3300032094	Soil	DDNKPLLKVVNEIVHVYETREQIEFRDQTPLLEINPSKNGGNTH
Ga0306920_1002971841	3300032261	Soil	VDDNKTLLKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTH
Ga0306920_1017360141	3300032261	Soil	DDNKPLLKVVNEIVHVHETREEIEFNDQTPLLEINPSKNGGNTH
Ga0310914_107390203	3300033289	Soil	EMHHSEVDDNKPLLKVVNEIVHVYETREQIEFKDQTPLLEINPSKNGGNTH
Ga0310914_110093922	3300033289	Soil	KVVNEIVHVHETREQIEFKDQTPLLEINPSKNGGNTH
Ga0310914_111068632	3300033289	Soil	KVVNEIVHVYETREEIEFKDQTPLLEINPSKNGGNTH
Ga0310914_116715941	3300033289	Soil	DSEPITKVVNEIVHVYETREQIEFNDQTPLLEINPSKNGGNTY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050941

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences