NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F050901

Metagenome / Metatranscriptome Family F050901

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F050901
Family Type Metagenome / Metatranscriptome
Number of Sequences 144
Average Sequence Length 45 residues
Representative Sequence GKRRLLRTYTFDYTSDGFERAQGFIVLAGQRLEAVGLAGTPS
Number of Associated Samples 116
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 2.08 %
% of genes from short scaffolds (< 2000 bps) 2.08 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (97.917 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(16.667 % of family members)
Environment Ontology (ENVO) Unclassified
(27.083 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 34.29%    Coil/Unstructured: 65.71%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF02811PHP 88.89
PF04325DUF465 4.17
PF00924MS_channel 2.08
PF01553Acyltransferase 1.39
PF11743DUF3301 1.39
PF00472RF-1 0.69
PF03449GreA_GreB_N 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 2.08
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 2.08
COG0216Protein chain release factor RF1Translation, ribosomal structure and biogenesis [J] 0.69
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 0.69
COG1186Protein chain release factor PrfBTranslation, ribosomal structure and biogenesis [J] 0.69


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.92 %
All OrganismsrootAll Organisms2.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300012944|Ga0137410_10190677All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1582Open in IMG/M
3300021406|Ga0210386_10206253All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1666Open in IMG/M
3300031231|Ga0170824_123872417All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1553Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil16.67%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog13.89%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa12.50%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.64%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.25%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated6.25%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog5.56%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.86%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland4.17%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.47%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.08%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.08%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.39%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.39%
Permafrost SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil0.69%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.69%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.69%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.69%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.69%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.69%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005947Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300007819Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009510Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009635Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10EnvironmentalOpen in IMG/M
3300009638Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10EnvironmentalOpen in IMG/M
3300009697Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021976Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1EnvironmentalOpen in IMG/M
3300023056Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2EnvironmentalOpen in IMG/M
3300024222Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32EnvironmentalOpen in IMG/M
3300025404Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025463Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027860Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028765Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2EnvironmentalOpen in IMG/M
3300028773Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2EnvironmentalOpen in IMG/M
3300028783Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3EnvironmentalOpen in IMG/M
3300028788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300028813Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3EnvironmentalOpen in IMG/M
3300028871Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1EnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029919Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029953II_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029992Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3EnvironmentalOpen in IMG/M
3300029993Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030020II_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300031027Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033822Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062385_1022515223300004080Bog Forest SoilRRLTLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGIPS*
Ga0062384_10035749613300004082Bog Forest SoilRLTLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGIPS*
Ga0062387_10100642513300004091Bog Forest SoilSRSANGKRRLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS*
Ga0062386_10051026013300004152Bog Forest SoilGTVAFAGFRVSRDAGGRRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSPS*
Ga0062388_10277843913300004635Bog Forest SoilDSGGKRRLLRTYTFDYTSDGFERAQGFIVLAGQQLQAVGLAGSPS*
Ga0070713_10184780313300005436Corn, Switchgrass And Miscanthus RhizosphereTRDGTGRRRLLRTYTFDYTHDGFKRSQGFIVLSGLRLEAVGLADSPS*
Ga0070762_1120919413300005602SoilFAGFRLSRDSRGKRRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGNPS*
Ga0070764_1009571943300005712SoilRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGSP*
Ga0066794_1024315013300005947SoilDSLGKRRLLRTYTFDYTNDGFERAQGFIVLAGHSVQTIGLAGSPS*
Ga0080027_1020014813300005993Prmafrost SoilLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGNPS*
Ga0075029_10109360013300006052WatershedsTYTFDYTRDGFERSQGFVVLAGRQLEAVGLADGAS*
Ga0075029_10134668813300006052WatershedsYTFDYTNDGFERAQGFIVLAGRQLEAVGLAGNPS*
Ga0097691_114748823300006055Arctic Peat SoilRTYTFDYTNDGFERAQGFIVLAGHQVQAVGLAGSPS*
Ga0104322_13361043300007819Permafrost SoilLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGSPL*
Ga0116229_1155207823300009500Host-AssociatedRTYTFDYTSDGFERAQGFIVLAGAELQSVGLAGHS*
Ga0116230_1046352123300009510Host-AssociatedLQRDARGRRRLLRTYTFDYTSDGFERAQGFVVLAGAELQSVGLAGNP*
Ga0116230_1093672613300009510Host-AssociatedVAFAGFRLRRDPEGRRQLLRTYTFDYTGDGVARAQGFIVLSRGRLEAVGLAGGAS*
Ga0116129_105123743300009633PeatlandLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGTPS*
Ga0116129_108461223300009633PeatlandYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGTPS*
Ga0116117_116207923300009635PeatlandGTVAFAGFRWARDGAGRRRLKRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGNP*
Ga0116113_113248223300009638PeatlandVAFAGFRMRRDSRGKRRLLRTYTFDYTRDGFERSQGFVVLAGHRIEAVGLADGAT*
Ga0116231_1052017723300009697Host-AssociatedAGFRLRRDAQGRRQLLRTYTFDYTGDGIARAQGFIVLSRGRLEAVGLAGGAS*
Ga0116227_1015636113300009709Host-AssociatedLRTYTFDYTNDGFARAQGFIVLEGRRPVTVGLAGAP*
Ga0116227_1072561613300009709Host-AssociatedFRVQRDANGKRRLLRTYTFDYTGDGFARAQGFVVLAAGRLEAVGLAGNAS*
Ga0116227_1109995913300009709Host-AssociatedTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGNSPP*
Ga0116226_1018173243300009787Host-AssociatedRTYTFDYTTDGFERAQGFIVLSGHQLEAVGLAAHSS*
Ga0136449_10158041023300010379Peatlands SoilRTYTFDYTSDGFERAQGFVVLAGRRLEAVGLAGSPS*
Ga0137392_1034218633300011269Vadose Zone SoilRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSPS*
Ga0137362_1134678623300012205Vadose Zone SoilVAFAGFRLTRDSRGKRQLLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGSPL*
Ga0137386_1109940013300012351Vadose Zone SoilSRGRRRFLRTYTFDYTNDGFERSQGFVILAGLRLEAVGLAGD*
Ga0137416_1083827923300012927Vadose Zone SoilLDGTVAFAGFRWSRGAQGGRRLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS*
Ga0137404_1059946223300012929Vadose Zone SoilYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSPS*
Ga0137407_1182058713300012930Vadose Zone SoilLTRDSRGRRRFLRTYTFDYTNDGFERSQGFVILAGLRLEAVGLAGE*
Ga0137407_1200385123300012930Vadose Zone SoilGRRLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS*
Ga0137410_1019067743300012944Vadose Zone SoilYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS*
Ga0181530_1001294993300014159BogFAGFRLRRDPGGKRRVLRTYTFDYTRDGFERSQGFVVLAGTRIEAVGLAGGTS*
Ga0181528_1005094113300014167BogRTYTFDYTNDGFERSQGFIVLSGRRLEAVGLAGSPS*
Ga0181528_1059936923300014167BogLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSSS*
Ga0181535_1071587123300014199BogRTYTFDYTSDGFERAQGFVVLAGRHLEAVGLAGSPS*
Ga0181537_1024771633300014201BogFTLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGTPS*
Ga0181537_1085293323300014201BogTLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGLPT*
Ga0181525_1083515923300014654BogTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS*
Ga0181516_1000998863300014655BogFAGFRLGREADRRLTLLRTYTFDYTSDGFERLQGFIVMAGPKLKSVGLAGARS*
Ga0137412_1044143323300015242Vadose Zone SoilRGKRQLLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGSPL*
Ga0137409_1021046913300015245Vadose Zone SoilRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS*
Ga0182033_1221955023300016319SoilSRGRRRLLRTYTFDYTNDGFVRAQGFIVLSGGELEAVGLAGNPS
Ga0193726_115217013300020021SoilVAFAGFRLTRDSRGKRRLLRTYTFDYTGDGFERAQGFIVLAGGRLEAVGLAGSPL
Ga0210399_1013224343300020581SoilAGFSLARDGRGKRRLLRTYTFDYTSDGFERAQGFIVLAGGQLQAVGLAGSA
Ga0210401_1100629323300020583SoilAFAGFRMARDVRGRRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSPS
Ga0210401_1137547323300020583SoilGKRRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGNPS
Ga0210406_1015347113300021168SoilRDSRGKRRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGNPS
Ga0210406_1037687313300021168SoilAFAGFRLTRDSRGKRRLLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGSPL
Ga0210400_1123624213300021170SoilLDGTVAFAGFRLARGPHGGRRLLRTYTFDYTSDGFERAQGFVVLSGRRLEAVGLAGSPS
Ga0210400_1132302713300021170SoilVRQPTGRRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSPS
Ga0210393_1074587613300021401SoilDIKGRRRLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGTPS
Ga0210389_1106025323300021404SoilARRLTLLRTYTFDYTSDGFERSQGFIVMAGPHLKAVGLAGTPS
Ga0210386_1020625313300021406SoilTRDIKGRRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSPS
Ga0210386_1052568513300021406SoilGRDVGRRLTLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGTPS
Ga0210383_1124332913300021407SoilLLRTYTFDYTSDGFERAQGFVVLAGRQLQAVGLAGSPS
Ga0210383_1165949913300021407SoilLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGTPS
Ga0210394_1028734643300021420SoilTYTFDYTSDGFERSQGFVVMSGRHVEAVGLAGAPS
Ga0210384_1188753523300021432SoilVFTGLRLARDARGKRRILRTYTFDYTRDGFERASGFIVLCGPRLEAVGLAEDLQ
Ga0210391_1061368223300021433SoilRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS
Ga0210390_1062994723300021474SoilRLTLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGTPS
Ga0210390_1082748023300021474SoilRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGTPS
Ga0210392_1001233613300021475SoilYPSGKRRLLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGSPL
Ga0210398_1084080813300021477SoilRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGSP
Ga0210410_1057631213300021479SoilRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGNPS
Ga0193742_119189523300021976SoilVAFAGFRLTRDSRGKRRLLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGNPL
Ga0233357_104712913300023056SoilGGRRLLRTYTFDYTSDGFERAQGFIVLAGLELKAVGLAGSPS
Ga0247691_101273513300024222SoilLTRDSRGKRRLLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGNPL
Ga0208936_104592023300025404PeatlandKRRLLRTYTFDYTRDGFERSQGFVVLAGHRIEAVGLADGAT
Ga0208193_104630913300025463PeatlandVAFAGFRLTRDINGRRRLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGTPS
Ga0209647_128335113300026319Grasslands SoilRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSPS
Ga0208983_109848513300027381Forest SoilRLTRDSRGKRRLLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGSPL
Ga0208993_107272013300027480Forest SoilRRPTGSRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSAS
Ga0209008_104649813300027545Forest SoilFRLDRDSRGKRRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGSP
Ga0209735_107179913300027562Forest SoilRDAAGRRRILRTYTFDYTSDGFARAQGFIVLAGLKLEAVGLAGSPS
Ga0209527_114239713300027583Forest SoilRFRLSRGAQGGRRLLRTYTFDYTSDGFERAQGFIVLAGLELEAVGLAGSPS
Ga0209626_111408613300027684Forest SoilRGTHGGRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSLS
Ga0209139_1009846813300027795Bog Forest SoilTKGPHGRRRLLRTYTFDYTSDGFERAQGFVVLAGLRLEAVGLAGNPS
Ga0209040_1043827913300027824Bog Forest SoilGFRLGKDSRGRRRLLRTYTFDYTNDGFERSQGFIVLAGGQVEAVGLAGSPT
Ga0209611_1070891213300027860Host-AssociatedFRLQRDARGRRRLLRTYTFDYTSDGFERAQGFVVLAGAELQSVGLAGNP
Ga0209275_1083619913300027884SoilVAFAGFRLSRDSRGKRRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGNPS
Ga0209006_1007453013300027908Forest SoilLTRDIKGRRRLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS
Ga0209006_1097839623300027908Forest SoilGTVAFAGFRLSRDSRGKRRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGNPS
Ga0209006_1103784223300027908Forest SoilNGKRRLLRTYTFDYTNDGVERAQGFIVLAGLRLEAVGLAGSS
Ga0137415_1142234613300028536Vadose Zone SoilMSRGTEGRRRLLRTYTFDYTSDGFERAQGFIVLAGLKVEAVGLAGSPS
Ga0302198_1019745523300028765BogETVAFAGFRLQRGADGRRRLLRTYTFDYTRDGFERAQGFVVLAGRHLEAVGLAGIAS
Ga0302234_1022742013300028773PalsaRVLRTYTFDYTSDGFERAQGFIVLAGQRLEAVGLAGSPS
Ga0302279_10004680183300028783BogLRTYTFDYTRDGFERRRGFIVLSGAAIEAVGLADDVH
Ga0302189_1025127113300028788BogFSGFRMGRDGQGRRKLLRTYTFDYTNDGFARQQGFVVLSSRGIEAVGLAGDLS
Ga0302228_1018664123300028808PalsaRARLRLLRTYTFDYTSDGFERSQGFVVLAGQRLEAVGLAGTPS
Ga0302157_1016404843300028813BogGFRWRRDAAGRRRLLRTYTFDYTRDGFERAQGFIVLAGAELQSVGLAGNS
Ga0302230_1045202613300028871PalsaDGTVAFAGFRLTRDIKGRRRLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS
Ga0311329_1049184113300029907BogFRLARNERGVRRLLRTYTFDYTRDGFERRRGFIVLSGAAIEAVGLADDVH
Ga0311329_1059029713300029907BogDVRGRRRLLRTYTFDYTNDGFDRQQGFIVLSGQRLEAVGLASNPT
Ga0311359_1102352123300029914BogRLLRTYTFDYTSDGFERSQGFVVLAGQRLEAVGLAGRPS
Ga0311358_1093918113300029915BogGKRRLLRTYTFDYTSDGFERAQGFIVLAGQRLEAVGLAGTPS
Ga0302141_114145913300029919BogGRRKLLRTYTFDYTNDGFARQQGFVVLSSRGIEAVGLAGDLS
Ga0311340_1017987713300029943PalsaTVAVTGFRLGRDAGGRITLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGTPS
Ga0311340_1078689923300029943PalsaLGRDAGARLTLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGTPS
Ga0311343_1022652943300029953BogFRLQRGADGRRRLLRTYTFDYTRDGFERAQGFVVLAGRHLEAVGLAGIAS
Ga0311331_1036846113300029954BogDDTVAFAGFRVQRDANGKRRLLRTYTFDYTGDGFARAQGFVVLAAGRLEAVGLAGNAS
Ga0311331_1055381833300029954BogLRTYTFDYTSDGFERSQGFVVLAGQRLEAVGLAGRPS
Ga0311331_1072000413300029954BogDSRGKRRLLRTYTFDYTSDGFARAQGFVVLAGRNLEAVGLAGSTS
Ga0311331_1107785613300029954BogTVAFAGFRLNRDSRARLRLLRTYTFDYTSDGFERSQGFVVLAGQRLEAVGLAGTPS
Ga0302276_1015758633300029992BogRLLRTYTFDYTSDGFERAQGFIVLAGQRLEAVGLAGTPS
Ga0302304_1029009323300029993PalsaAKRLTLLRTYTFDYTGDGVERSQGFIVMAGPNLKAVGLAGTPS
Ga0311339_1005341613300029999PalsaRTYTFDYTSDGFERAQGFIVLSGMQLQAVGLAGSPS
Ga0311338_1123979313300030007PalsaRLKRTYTFDYTNDGFERAQGFIVLAGGRLEAVGLAGNPS
Ga0311344_1081420513300030020BogGRRRLLRTYTFDYTSDGFERAQGFIVMSGARLEAVGLAGNSS
Ga0311344_1081853013300030020BogLGRDSRGKRRLLRTYTFDYTSDGFARAQGFVVLAGRNLEAVGLAGSTS
Ga0302181_1039566413300030056PalsaDARGRLTLLRTYTFDYTSDGFERSQGFIVMAGPNLKAVGLAGTPS
Ga0302181_1049154113300030056PalsaTRDIKGRRRLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGSPS
Ga0302179_1033534523300030058PalsaRLRLLRTYTFDYTSDGFERSQGFVVLAGQRLEAVGLAGTPS
Ga0311353_1024971213300030399PalsaVAFAGFRLGRDSAKRLTLLRTYTFDYTGDGVERSQGFIVMAGPNLKAVGLAGTPS
Ga0310037_1044998313300030494Peatlands SoilFRLSRDSRGRRRLLRTYTFDYTSDGFERAQGFVVLAGRRLEAVGLAGSPS
Ga0311354_1028159513300030618PalsaFAGFRLTRDSRARLRLLRTYTFDYTSDGFERSQGFVVLAGQRLEAVGLAGTPS
Ga0307482_110246823300030730Hardwood Forest SoilRDSLGKRRLLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGSPL
Ga0302310_1056402713300030737PalsaSRARLRLLRTYTFDYTSDGFERSQGFVVLAGQRLEAVGLAGTPS
Ga0302311_1044328723300030739PalsaTVAFAGFRLSRGADGRRRLLRTYTFDYTSDGFERAQGFIVLAGLRLQAVGLAGSPS
Ga0265461_1129878013300030743SoilFAGFRLARDSRARRRLLRVYTFDYTSDGFERAQGFIVLAGRQLEAVGLAGSPS
Ga0302308_1023654213300031027PalsaLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGSP
Ga0265760_1023004413300031090SoilRRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGSP
Ga0170824_12387241743300031231Forest SoilFRWVRQPTGRRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGNPS
Ga0302325_1257747923300031234PalsaGFRMARGAGGKRRLLRTYTFDYTSDGFERAQGFIVLAGLKVEAVGLAESPS
Ga0302324_10276734913300031236PalsaAFAGFRLTRDARGKRRLLRTYTFDYTSDGFERAQGFIVLAGGRLEAVGLAGSPL
Ga0302318_1015516423300031258BogGFRMGRDGQGRRKLLRTYTFDYTNDGFARQQGFVVLSSRGIEAVGLAGDLS
Ga0310686_10058819523300031708SoilAFAGFRLTRDSRRRRRLLRTYTFDYTHDGYERAQGFIVLSGQQLEAVGLAGSPS
Ga0310686_11419527913300031708SoilRDARGKRRLLRTYTFDYTSDGFERAQGFIVLAGQRLEAVGLAGNPS
Ga0310686_11442655413300031708SoilAFAGFRLARQANGKRRLLRTYTFDYTADGFERAQGFIVLAGQRLEAVGLAGNSS
Ga0310686_11963047723300031708SoilRSSDDGRRRLLRTYTFDYTSDGFERSQGFVLMSGRHVEAVGLAGTPS
Ga0307476_1091353823300031715Hardwood Forest SoilRTYTFDYTSDGFERAQGFIVLAGGRLETVGLAGLPAGNVS
Ga0307476_1142546623300031715Hardwood Forest SoilWRRDGGGRRRLLRTYTFDYTSDGFERAQGFIVLSGGRLQAVGLAGNPS
Ga0307474_1071040223300031718Hardwood Forest SoilAFAGFRWVRQPTGGRRLLRTYTFDYTSDGFERAQGFIVLAGLKLEAVGLAGSPS
Ga0302319_1108191613300031788BogVQRDANGKRRLLRTYTFDYTGDGFARAQGFVVLAAGRLEAVGLAGNAS
Ga0302319_1181125613300031788BogAGFRLGQDSRGRRRVLRTYTFDYTSDGFERAQGFIILAGLRLEAVGLARGRSLMRPTP
Ga0307479_1015859243300031962Hardwood Forest SoilAFAGFRLTLDSRGKRRLLRTYTFDYTSDGFERAQGFVVLAGDRLEAVGLAGSPL
Ga0311301_1221552623300032160Peatlands SoilLLRTYTFDYTNDGFERAQGFIVLAGHSVQAIGLAGSPS
Ga0335072_1171631913300032898SoilRRDGGGRRRLLRTYTFDYTSDGFERAQGFIVLSGHRLEAVGLAGTAP
Ga0335073_1177642313300033134SoilRRDGGGRRRLLRTYTFDYTSDAFERAQGFIVLSGHRLEAVGLAGTAP
Ga0334828_055485_3_1523300033822SoilRLARGADGRRRLLRTYTFDYTSDGFERAQGFIVLAGLRLEAVGLAGTSS
Ga0370483_0183755_2_1633300034124Untreated Peat SoilFAGFRLSRDSRGKRRLLRTYTFDYTNDGFERAQGFIVLAGNRLEAVGLAGSPS


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