Metagenome / Metatranscriptome Family F050739

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050739
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	88 residues
Representative Sequence	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLAPSATDRKAAAL
Number of Associated Samples	99
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.59 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	61.38 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.414 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.241 % of family members)
Environment Ontology (ENVO)	Unclassified (46.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.897 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.19% β-sheet: 17.80% Coil/Unstructured: 61.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00571	CBS	12.41
PF14534	DUF4440	6.21
PF01541	GIY-YIG	4.14
PF00582	Usp	4.14
PF03466	LysR_substrate	4.14
PF12836	HHH_3	0.69
PF07885	Ion_trans_2	0.69
PF13424	TPR_12	0.69
PF02012	BNR	0.69
PF10996	Beta-Casp	0.69
PF07244	POTRA	0.69
PF13442	Cytochrome_CBB3	0.69
PF01584	CheW	0.69
PF03773	ArsP_1	0.69
PF13205	Big_5	0.69
PF07366	SnoaL	0.69
PF03625	DUF302	0.69
PF16491	Peptidase_M48_N	0.69
PF10099	RskA	0.69
PF13650	Asp_protease_2	0.69
PF01833	TIG	0.69
PF09699	Paired_CXXCH_1	0.69
PF03884	YacG	0.69
PF01740	STAS	0.69
PF06071	YchF-GTPase_C	0.69
PF00118	Cpn60_TCP1	0.69
PF06983	3-dmu-9_3-mt	0.69
PF05598	DUF772	0.69
PF03795	YCII	0.69
PF08843	AbiEii	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.69
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	0.69
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.69
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.69
COG3024	Endogenous inhibitor of DNA gyrase, YacG/DUF329 family	Replication, recombination and repair [L]	0.69
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.69
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.41 %
Unclassified	root	N/A	47.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.41 %
Unclassified	root	N/A	47.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.41 %
Unclassified	root	N/A	47.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.10 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.59 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.38 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.38 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.69 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.45 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.69 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.45 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.69 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.45 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.69 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10000123	All Organisms → cellular organisms → Bacteria	57282	Open in IMG/M
3300002245\|JGIcombinedJ26739_100267191	All Organisms → cellular organisms → Bacteria → Acidobacteria	1597	Open in IMG/M
3300002886\|JGI25612J43240_1015965	Not Available	1111	Open in IMG/M
3300003219\|JGI26341J46601_10078944	Not Available	985	Open in IMG/M
3300004633\|Ga0066395_10287376	Not Available	895	Open in IMG/M
3300005332\|Ga0066388_102315243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300005332\|Ga0066388_102761773	Not Available	897	Open in IMG/M
3300005531\|Ga0070738_10000353	All Organisms → cellular organisms → Bacteria	138880	Open in IMG/M
3300005537\|Ga0070730_10180950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1414	Open in IMG/M
3300005537\|Ga0070730_10781807	Not Available	602	Open in IMG/M
3300005555\|Ga0066692_10065669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2064	Open in IMG/M
3300005602\|Ga0070762_10622171	Not Available	719	Open in IMG/M
3300006050\|Ga0075028_100843268	Not Available	561	Open in IMG/M
3300006052\|Ga0075029_100042710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2606	Open in IMG/M
3300006052\|Ga0075029_100059005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2235	Open in IMG/M
3300006102\|Ga0075015_100849897	Not Available	551	Open in IMG/M
3300006162\|Ga0075030_100546951	Not Available	920	Open in IMG/M
3300009792\|Ga0126374_10881422	Not Available	692	Open in IMG/M
3300010043\|Ga0126380_11856448	Not Available	547	Open in IMG/M
3300010048\|Ga0126373_10070670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	3153	Open in IMG/M
3300010048\|Ga0126373_10652977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300010359\|Ga0126376_10029000	All Organisms → cellular organisms → Bacteria	3716	Open in IMG/M
3300010360\|Ga0126372_12289163	Not Available	590	Open in IMG/M
3300010361\|Ga0126378_10023448	All Organisms → cellular organisms → Bacteria	5386	Open in IMG/M
3300010361\|Ga0126378_10883540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1001	Open in IMG/M
3300010366\|Ga0126379_13307050	Not Available	540	Open in IMG/M
3300010376\|Ga0126381_101918558	Not Available	854	Open in IMG/M
3300010398\|Ga0126383_13228811	Not Available	532	Open in IMG/M
3300011271\|Ga0137393_10831880	Not Available	789	Open in IMG/M
3300012202\|Ga0137363_10418343	Not Available	1118	Open in IMG/M
3300012202\|Ga0137363_10621825	Not Available	912	Open in IMG/M
3300012202\|Ga0137363_10678149	Not Available	872	Open in IMG/M
3300012359\|Ga0137385_10093985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2659	Open in IMG/M
3300012685\|Ga0137397_10284289	Not Available	1232	Open in IMG/M
3300012925\|Ga0137419_10140653	Not Available	1730	Open in IMG/M
3300015054\|Ga0137420_1006561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300015242\|Ga0137412_10281851	Not Available	1307	Open in IMG/M
3300016270\|Ga0182036_10221548	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300016270\|Ga0182036_10501701	Not Available	961	Open in IMG/M
3300017822\|Ga0187802_10221967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300017944\|Ga0187786_10113815	Not Available	930	Open in IMG/M
3300017961\|Ga0187778_10317762	Not Available	1010	Open in IMG/M
3300019278\|Ga0187800_1882865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2023	Open in IMG/M
3300020140\|Ga0179590_1174403	Not Available	589	Open in IMG/M
3300020199\|Ga0179592_10170120	Not Available	993	Open in IMG/M
3300020579\|Ga0210407_10000018	All Organisms → cellular organisms → Bacteria	254268	Open in IMG/M
3300020579\|Ga0210407_10000106	All Organisms → cellular organisms → Bacteria → Acidobacteria	106636	Open in IMG/M
3300020579\|Ga0210407_10048207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3177	Open in IMG/M
3300020579\|Ga0210407_10081762	All Organisms → cellular organisms → Bacteria → Acidobacteria	2435	Open in IMG/M
3300020579\|Ga0210407_10260238	Not Available	1352	Open in IMG/M
3300020579\|Ga0210407_11410646	Not Available	516	Open in IMG/M
3300020580\|Ga0210403_10010258	All Organisms → cellular organisms → Bacteria	7644	Open in IMG/M
3300020580\|Ga0210403_10010965	All Organisms → cellular organisms → Bacteria	7362	Open in IMG/M
3300020580\|Ga0210403_10029064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4414	Open in IMG/M
3300020580\|Ga0210403_10061492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3009	Open in IMG/M
3300020580\|Ga0210403_10099270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2359	Open in IMG/M
3300020580\|Ga0210403_10295696	Not Available	1327	Open in IMG/M
3300020580\|Ga0210403_10384895	Not Available	1146	Open in IMG/M
3300020580\|Ga0210403_11085394	Not Available	622	Open in IMG/M
3300020581\|Ga0210399_10004994	All Organisms → cellular organisms → Bacteria	10310	Open in IMG/M
3300020581\|Ga0210399_10005653	All Organisms → cellular organisms → Bacteria	9719	Open in IMG/M
3300020581\|Ga0210399_10021002	All Organisms → cellular organisms → Bacteria	5170	Open in IMG/M
3300020581\|Ga0210399_10076788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2709	Open in IMG/M
3300020582\|Ga0210395_10074758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2495	Open in IMG/M
3300020583\|Ga0210401_10020072	All Organisms → cellular organisms → Bacteria	6426	Open in IMG/M
3300020583\|Ga0210401_10171874	Not Available	2021	Open in IMG/M
3300021088\|Ga0210404_10272723	Not Available	925	Open in IMG/M
3300021088\|Ga0210404_10671296	Not Available	590	Open in IMG/M
3300021088\|Ga0210404_10797798	Not Available	539	Open in IMG/M
3300021168\|Ga0210406_10393184	Not Available	1112	Open in IMG/M
3300021170\|Ga0210400_10000051	All Organisms → cellular organisms → Bacteria → Acidobacteria	196370	Open in IMG/M
3300021170\|Ga0210400_10001457	All Organisms → cellular organisms → Bacteria	23531	Open in IMG/M
3300021170\|Ga0210400_10077588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2607	Open in IMG/M
3300021170\|Ga0210400_10148810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1885	Open in IMG/M
3300021171\|Ga0210405_10001001	All Organisms → cellular organisms → Bacteria	34338	Open in IMG/M
3300021178\|Ga0210408_10560940	Not Available	906	Open in IMG/M
3300021180\|Ga0210396_10044129	All Organisms → cellular organisms → Bacteria	4098	Open in IMG/M
3300021180\|Ga0210396_11111690	Not Available	665	Open in IMG/M
3300021181\|Ga0210388_10591064	Not Available	971	Open in IMG/M
3300021403\|Ga0210397_10817627	Not Available	720	Open in IMG/M
3300021405\|Ga0210387_10670961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300021406\|Ga0210386_10647384	Not Available	912	Open in IMG/M
3300021420\|Ga0210394_10000009	All Organisms → cellular organisms → Bacteria	492652	Open in IMG/M
3300021420\|Ga0210394_10000191	All Organisms → cellular organisms → Bacteria	147144	Open in IMG/M
3300021420\|Ga0210394_10270111	Not Available	1489	Open in IMG/M
3300021432\|Ga0210384_11694854	Not Available	537	Open in IMG/M
3300021477\|Ga0210398_10061728	All Organisms → cellular organisms → Bacteria → Acidobacteria	3062	Open in IMG/M
3300021477\|Ga0210398_10243360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1466	Open in IMG/M
3300021478\|Ga0210402_10053536	All Organisms → cellular organisms → Bacteria → Acidobacteria	3533	Open in IMG/M
3300021560\|Ga0126371_10020191	All Organisms → cellular organisms → Bacteria → Acidobacteria	6138	Open in IMG/M
3300021560\|Ga0126371_10049623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4012	Open in IMG/M
3300021560\|Ga0126371_11679021	Not Available	759	Open in IMG/M
3300024178\|Ga0247694_1023989	Not Available	685	Open in IMG/M
3300024181\|Ga0247693_1009653	Not Available	1207	Open in IMG/M
3300024182\|Ga0247669_1000007	All Organisms → cellular organisms → Bacteria	290801	Open in IMG/M
3300024186\|Ga0247688_1075515	Not Available	565	Open in IMG/M
3300024249\|Ga0247676_1031983	Not Available	844	Open in IMG/M
3300024288\|Ga0179589_10183121	Not Available	908	Open in IMG/M
3300024325\|Ga0247678_1047482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300024347\|Ga0179591_1118582	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300024347\|Ga0179591_1136573	All Organisms → cellular organisms → Bacteria → Acidobacteria	1956	Open in IMG/M
3300025906\|Ga0207699_10343484	Not Available	1052	Open in IMG/M
3300026490\|Ga0257153_1005509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2485	Open in IMG/M
3300026490\|Ga0257153_1007646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2133	Open in IMG/M
3300026514\|Ga0257168_1158815	Not Available	504	Open in IMG/M
3300026557\|Ga0179587_10375523	Not Available	924	Open in IMG/M
3300027376\|Ga0209004_1028862	All Organisms → cellular organisms → Bacteria → PVC group	903	Open in IMG/M
3300027562\|Ga0209735_1001209	All Organisms → cellular organisms → Bacteria	4444	Open in IMG/M
3300027565\|Ga0209219_1105946	Not Available	691	Open in IMG/M
3300027635\|Ga0209625_1076166	Not Available	751	Open in IMG/M
3300027660\|Ga0209736_1203107	Not Available	514	Open in IMG/M
3300027706\|Ga0209581_1000261	All Organisms → cellular organisms → Bacteria	150499	Open in IMG/M
3300027857\|Ga0209166_10040880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2760	Open in IMG/M
3300027867\|Ga0209167_10103878	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300027898\|Ga0209067_10109587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1442	Open in IMG/M
3300027911\|Ga0209698_10045534	All Organisms → cellular organisms → Bacteria	3884	Open in IMG/M
3300028047\|Ga0209526_10479226	Not Available	814	Open in IMG/M
3300029636\|Ga0222749_10100441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300031057\|Ga0170834_107557083	All Organisms → cellular organisms → Bacteria → Acidobacteria	2190	Open in IMG/M
3300031057\|Ga0170834_110919203	Not Available	682	Open in IMG/M
3300031057\|Ga0170834_112940767	Not Available	862	Open in IMG/M
3300031122\|Ga0170822_15009350	Not Available	586	Open in IMG/M
3300031128\|Ga0170823_12101868	Not Available	561	Open in IMG/M
3300031231\|Ga0170824_120412655	Not Available	585	Open in IMG/M
3300031474\|Ga0170818_107456000	Not Available	732	Open in IMG/M
3300031718\|Ga0307474_10446184	Not Available	1011	Open in IMG/M
3300031720\|Ga0307469_10570241	Not Available	1006	Open in IMG/M
3300031720\|Ga0307469_11228484	Not Available	709	Open in IMG/M
3300031740\|Ga0307468_100058401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2066	Open in IMG/M
3300031754\|Ga0307475_11030060	Not Available	646	Open in IMG/M
3300031912\|Ga0306921_10017181	All Organisms → cellular organisms → Bacteria	7876	Open in IMG/M
3300031954\|Ga0306926_11664284	Not Available	730	Open in IMG/M
3300032001\|Ga0306922_10496974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1300	Open in IMG/M
3300032174\|Ga0307470_10309988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300032180\|Ga0307471_100094888	All Organisms → cellular organisms → Bacteria → Acidobacteria	2684	Open in IMG/M
3300032180\|Ga0307471_100176133	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300032180\|Ga0307471_100196825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2011	Open in IMG/M
3300032180\|Ga0307471_103885920	Not Available	528	Open in IMG/M
3300032770\|Ga0335085_10008578	All Organisms → cellular organisms → Bacteria	15581	Open in IMG/M
3300032770\|Ga0335085_10098615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3783	Open in IMG/M
3300032770\|Ga0335085_10382102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1640	Open in IMG/M
3300032782\|Ga0335082_10942650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300032829\|Ga0335070_10000004	All Organisms → cellular organisms → Bacteria → Acidobacteria	548315	Open in IMG/M
3300032893\|Ga0335069_10021723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8856	Open in IMG/M
3300032893\|Ga0335069_10091892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3852	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.79%
Aquatic	Environmental → Aquatic	6.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.79%
Sediment	Environmental → Aquatic → Sediment	4.83%
Freshwater	Environmental → Aquatic → Freshwater	1.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.93%
Loam	Environmental → Terrestrial → Soil → Loam	8.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.38%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.07%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_1000012335	3300001593	Forest Soil	MASPAVSEKFRAVVCRHCSKPIRVPGLITRKEIEFRGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPFALAASATDRKAAAL*
JGIcombinedJ26739_1002671912	3300002245	Forest Soil	MASPVVSEKFRAVVCRHCSKPIRVPGLVTRKEIEFRGLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFARAASATDREAAAL*
JGI25612J43240_10159652	3300002886	Grasslands Soil	MASPAVASKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLASSATERKAAAF*
JGI26341J46601_100789442	3300003219	Bog Forest Soil	MSSSVVSEKFRAVVCRHCGKPIRVPALVMKRESDALSYSDSGDIHYQLVSRVFNVRCRSCERESVYSNNQIVDYPFPLAPSTSDRKAASL*
Ga0066395_102873762	3300004633	Tropical Forest Soil	MASPVVSERFRAVVCRHCGKPIRVPALVTRRESEFQGLPDSGSMQYQLISRVFNVRCRSCERESVYSINQIIDYAYSPAPSATDRKAAAL*
Ga0066388_1023152431	3300005332	Tropical Forest Soil	MTSPVVSESFRAVLCRHCGKPIRVPALVSRRESAFQISGNSNDIHYQLISRVFNVRCRSCERESVYSINQIIDHPHPLGPSATDRKAAAL*
Ga0066388_1027617731	3300005332	Tropical Forest Soil	MSSPVVSERFRAVLCRHCGKPIRVPALVSRRESEFQISADPNDVHYQLISRVFNVRCRTCERESVYSINQIVDHPFPLAPSATDRKAASL*
Ga0070738_100003533	3300005531	Surface Soil	MASSAVSQRFRAVVCRYCSKPIRVPASVTRRESEFQGITESTSTRHQLISRVFHVRCRCCERESVYSINQIVDFPHPVTCPESDHKAATL*
Ga0070730_101809502	3300005537	Surface Soil	MASPVVSEKFRAVVCRHCGKPIRVPGLITRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYAYPMAPSATDRKAAAL*
Ga0070730_107818072	3300005537	Surface Soil	MASPVVSEKFRAVVCRHCGKPIRVPGLITRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLPAADGRKSATI*
Ga0066692_100656693	3300005555	Soil	MASPAMSQKFRAVVCRHCGKPIRVPGLITRKEREFQGLTDSGDMHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLPSSATDPKAAAL*
Ga0070762_106221712	3300005602	Soil	MSSPVVSGKFRAVLCRHCAKPIRVPALVMKKESEFQSLTDASDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKSASA*
Ga0075028_1008432682	3300006050	Watersheds	MASSVVSEKFRAVVCRHCGKPIRVPGLITRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLAPSATDRKAASL*
Ga0075029_1000427105	3300006052	Watersheds	MSSPVVSERFRAVVCRHCGKPIRVPALVSRREIEFHSLTDSTSTQYQLISRVFNVRCRCCERESVYSINQIVDFPHPVTCPEQDRNPATL*
Ga0075029_1000590053	3300006052	Watersheds	MSSPAVSPKLRAVLCRHCGKPIRVPALVMKRESEALGLTDTGDIHYQLVSRVFNVRCRSCERESVYSINQIVDYPFPLGPSATDRKAASL*
Ga0075015_1008498971	3300006102	Watersheds	MASPAVSNKFRAVLCRHCAKPIRIPALVMKKESEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPALGDCKAASA*
Ga0075030_1005469512	3300006162	Watersheds	MASPAVSNKFRAVLCRHCAKPIRIPALVMKKESEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPALGGCKAASA*
Ga0126374_108814221	3300009792	Tropical Forest Soil	MSSPVVSERFRAVLCRHCGKPIRVPALVSRRESEFQISADPNDVHYQLISRVFNVRCRTCERESVYSINQIVDHPFPLGPSATDRKAASL
Ga0126380_118564481	3300010043	Tropical Forest Soil	MASPVVSERFRAVVCRHCGKPIRVPSLVTRRESEFQGLSDSGSVAYQLISRVFNVRCRSCQRESVYSISQIVDSVSPLAPSATDRKAAAL*
Ga0126373_100706701	3300010048	Tropical Forest Soil	MASPVVSESFRAVLCRHCGKPIRVPAVVTRRESEFQISGNSNDIHYQLISRVFNVRCRSCARESVYSINQIVDYTYPLGPSTTDRKTAAL*
Ga0126373_106529772	3300010048	Tropical Forest Soil	MASPVVSESFRAVLCRHCGKPIRVPALVSRRESEFQISGNSNDIHYQLISRVFNVRCRSCERESVYSINQIIDYPYPLGPSGADRKAASL*
Ga0126376_100290002	3300010359	Tropical Forest Soil	MASPVVSESFRAVLCRHCGKPIRVPALVTRRESEFQISGNSNDIHYQLVSRVFNVRCRCCERESVYSINQIVDQPYPLGPSVNDRNAATL*
Ga0126372_122891631	3300010360	Tropical Forest Soil	MASPVVSESFRAVLCRHCGKPIRVPAVVTRRESEFQISGNSNDIHYQLISRVFNVRCRSCARESVYSINQIVDYT
Ga0126378_100234488	3300010361	Tropical Forest Soil	LMTSPVVSESFRAVLCRHCGKPIRVPALVSRRESAFQISGNSNDIHYQLISRVFNVRCRSCERESVYSINQIIDHPHPLGPSATDRKAAAL*
Ga0126378_108835401	3300010361	Tropical Forest Soil	MSSPVVSERFRAVICRHCGKPIRVPALVSRRESEFQISADPNDVHYQLISRVFNVRCRTCERESVYSINQIVDHPFPLAPSATDRKAASL*
Ga0126379_133070501	3300010366	Tropical Forest Soil	MASPVVSERFRAVVCRHCGKPIRVPALVTRRESEFQGLSDSGSMQHQLISRVFNVRCRSCERESVYSINQIIDYAYSLAPSATDRKAAAL*
Ga0126381_1019185582	3300010376	Tropical Forest Soil	MSSPVVSERFRAVICRHCGKPIRVPALVSRRESEFQISTDPNDVHYQLISRVFNVRCRTCERESVYSINQIVDHPFPLAPSATDRKAASL*
Ga0126383_132288111	3300010398	Tropical Forest Soil	MASPVVSERFRAVVCRHCGKPIRVPALVTRRESEFQGLSDSGSMQYQLISRVFNVRCRSCERESVYSINQIIDYAYSLAPSATDRKAAAL*
Ga0137393_108318802	3300011271	Vadose Zone Soil	VLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLVSRVFNVRCRSCERESVYSINQIVDYPYPLPASADRNAAAI*
Ga0137363_104183432	3300012202	Vadose Zone Soil	MASPVVSEKFRAVVCRHCGKPIRVPGLVTRKELEFQGLTDSGDAHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLASSATDRKAAAV*
Ga0137363_106218251	3300012202	Vadose Zone Soil	AVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLASSATERKAAAF*
Ga0137363_106781492	3300012202	Vadose Zone Soil	MSSPAVSTKFRAVLCRHCAKPIRVPSLIMKKEVEFQTLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCNSASL*
Ga0137385_100939853	3300012359	Vadose Zone Soil	MASPAVSNKFRAVLCRHCAKPIRVPALIMKKETEFQSLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIIDYPYPLAPSATDREAARL*
Ga0137397_102842893	3300012685	Vadose Zone Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLPASAADRNAPAI*
Ga0137419_101406532	3300012925	Vadose Zone Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLVSRVFNVRCRSCERESVYSINQIVDYPYPLPASAADRNAPAI*
Ga0137420_10065613	3300015054	Vadose Zone Soil	RHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLASSATERKAAAF*
Ga0137412_102818513	3300015242	Vadose Zone Soil	MSSPAVSTKFRAVLCRHCAKPIRVPSLIMKKEVEFQTLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGGCNSASL*
Ga0182036_102215481	3300016270	Soil	MASPVVSERFRAVVCRHCGKPIRVPALVTRRESEFQGLSDSGSMQYQLISRVFNVRCRSCERESVYSINQIIDCAYSPAPSATDRKAAAL
Ga0182036_105017012	3300016270	Soil	MASPVVSESFRAVLCRHCGKAIRVPALVTRRESEFQISGNSNDIHYQLISRVFNVRCRSCERESVYSINQIIDHPHALGPSATDRKAAAL
Ga0187802_102219672	3300017822	Freshwater Sediment	MSSSVVSERFRAVLCRHCGKPIRVPALIVKRESEFLGPADPSDIHYHLVSRVFNVRCRSCERESVYSINQIVDYAYPLAPSATDRKAAAL
Ga0187786_101138153	3300017944	Tropical Peatland	MASPVVSERFRAVVCRHCGKPIRVPALITRRESEFQGLSDSGSVEYQLISRVFNVRCRSCERESVYSMHQIVDSASPLAPSATDRKAAAL
Ga0187778_103177622	3300017961	Tropical Peatland	MSSSVVSERYRAVVCRHCGKPIRVPALVTRRESEFQGLTDSTSLQYQLISRVFNVRCRCCERESVYSINQIVDFPHPVTCPEPDRDTATL
Ga0187800_18828651	3300019278	Peatland	MSSSVVSERYRAVVCRHCGKPIRVPALVSRRETEFQGLTDSTSMQYQLISRVFNVRCRCCERESVYSINQIVDFPHPVICPEPDRDIATL
Ga0179590_11744031	3300020140	Vadose Zone Soil	MASPAVASKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLASSATERKAAAF
Ga0179592_101701203	3300020199	Vadose Zone Soil	MASPAVSTKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLVSRVFNVRCRSCERESVYSINQIVDYPYPLPASAADRNASAI
Ga0210407_1000001814	3300020579	Soil	MASPVVSEKFRAVVCRHCSKPIRVPGLITRKEIEFQGLTDSGDIHHHLISRVFNVRCRSCERESVYSINQIVDYPFARAASATDREAAAL
Ga0210407_100001062	3300020579	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKETAFQSLTDSGDIHYHLISRVFNVRCRCCERESVYSINQIIDYPYAMAPAPGDCKSASL
Ga0210407_100482075	3300020579	Soil	MSSPVVSEKFRAVVCRHCSKPIRVPGLITRKEIEFRGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPFARAASATDRNAAAL
Ga0210407_100817624	3300020579	Soil	MSSPVVSGKFRAVLCRHCAKPIRVPALVMKKESEFQSLTDASDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKAASA
Ga0210407_102602382	3300020579	Soil	MASPAVSSKFRAVLCRHCAKPIRIPALIMKKESEFQLLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPSPADCKGASA
Ga0210407_114106461	3300020579	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKETEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMTPAPGDCKSASL
Ga0210403_100102587	3300020580	Soil	MASPAVSNNFRAVLCRHCAKPIRVPALIMKKEAEFQTLTDSGDIHYHLISRVFNVRCRCCQRESVYSINQIVDSPYPLAPCSPDRKAASL
Ga0210403_100109651	3300020580	Soil	MSSPAVSTKFRAVLCRHCAKPIRVPSLIMKKEVEFQTLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPTPGDCKSASL
Ga0210403_100290645	3300020580	Soil	MASSVVSEKFRAVVCRHCSKPIRVPGLISRKEIEFQGLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLAASATDPKAASL
Ga0210403_100614925	3300020580	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKETEFQSLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIIDYPYPLAPSATDRKAASL
Ga0210403_100992703	3300020580	Soil	MASPAISSKFRAVVCRHCGKPIRVPGLISRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLGPSPTDHKTAAL
Ga0210403_102956962	3300020580	Soil	MASPAVSTKFRAVVCRHCAKPIRIPALVMKKETEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAASSDCKSAAL
Ga0210403_103848952	3300020580	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESDFQSLTDSSDIHYHLVSRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKSASL
Ga0210403_110853942	3300020580	Soil	MASPAVSSKFRAVLCRHCAKPIRIPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQII
Ga0210399_100049949	3300020581	Soil	MASPAVSGKFRAVLCRHCAKPIRVPALIMKKETEFQSLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIIDYPYPLAPSATDRKAASL
Ga0210399_100056535	3300020581	Soil	MASPAVSSKFRAVLCRHCAKPIRIPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPSPADCKGASA
Ga0210399_100210024	3300020581	Soil	MSSPAVSTKFRAVLCRHCAKPIRVPSLIMKKEVEFQTLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAIALAPGDCKSASL
Ga0210399_100767884	3300020581	Soil	MASPAVSTKFRAVVCRHCAKPIRIPALVMKKETEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAAASDCKSAAL
Ga0210395_100747584	3300020582	Soil	FRAVVCRHCAKPIRIPALVMKKETEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAAASDCKSAAL
Ga0210401_100200723	3300020583	Soil	MASPAVSSKFRAVVCRHCAKPIRVPALVMKKETEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSISQIIDYPFAIAAASTDCKSAAF
Ga0210401_101718743	3300020583	Soil	MSSPVVSGKFRAVLCRHCAKPIRVPALVMKKESEFQSLTDASDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKSASA
Ga0210404_102727231	3300021088	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKETAFQSLTDSGDIHYHLISRVFNVRCRCCERESVYSINQIIDYPYAMAPAPSDCKSASL
Ga0210404_106712961	3300021088	Soil	MSSPVVSGKYRAVLCRHCAKPIRIPALVMKKESEFQTLTDSNDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKAASA
Ga0210404_107977981	3300021088	Soil	MSSPVVSGKFRAVLCRHCAKPIRIPALVMKKESEFQTLTDSNDIHYHLISRVFNVRCRCCERESVYSINQIVDYPFAMVSSAGC
Ga0210406_103931844	3300021168	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLGASSPDHKGASL
Ga0210400_10000051165	3300021170	Soil	MASPAVSSKFRAVVCRHCGKPIRVPGLITRKELEFQGLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIVDYPYSLAPSGTDRNSAAL
Ga0210400_100014577	3300021170	Soil	MASPAVSSKFRAVVCRHCAKPIRVPALIMKKETEFQALTDSNDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAIAAASTDCKSAAF
Ga0210400_100775883	3300021170	Soil	MASPVVSEKFRAVVCRHCGKPIRVPGLISRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSISQIVDYPYPLGPSATDRKAAGL
Ga0210400_101488103	3300021170	Soil	PLDPAQIQGVIPMASPAISSKFRAVVCRHCGKPIRVPGLISRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLGPSPTDHKTAAL
Ga0210405_1000100116	3300021171	Soil	MASPAVSNKFRAVLCRHCAKPIRVPALIMKKEAAFQTLADSGDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKAASA
Ga0210408_105609402	3300021178	Soil	MSSPVVSGKFRAVLCRHCAKPIRIPALVMKKESEFQTLTDSNDIHYHLISRVFNVRCRCCERESVYSINQIVDYPFAMVSSAGCKSASA
Ga0210396_100441294	3300021180	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKETEFQALTDSSDIHYHLISRVFNVRCRCCERESVYSLNQIIDYPFAMAASAGCKSAAL
Ga0210396_111116902	3300021180	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESDFQSLTDSSDIHYHLVSRVFNVRCRCCERESVYSINQIIDYPF
Ga0210388_105910641	3300021181	Soil	SSKFRAVLCRHCAKPIRVPALIMKKETAFQSLTDSGDIHYHLISRVFNVRCRCCERESVYSINQIIDYPYAMAPAPGDCKSASL
Ga0210397_108176272	3300021403	Soil	VVCRHCAKPIRIPALVMKKETEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAAASDCKSAAL
Ga0210387_106709611	3300021405	Soil	RHCAKPIRVPALIMKKETEFQSLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIIDYPYPLAPSATDRKAASL
Ga0210386_106473841	3300021406	Soil	MASPAVSSKFRAVVCRHCAKPIRVPALIMKKETEFQALTDSNDIHYHLISRVFNVRCRCCERESVYSINQIIDYP
Ga0210394_10000009397	3300021420	Soil	MASPVVSEKFRAVVCRHCSKPIRVPGLVSRKEIEFQGLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFALAASAADRKSAAL
Ga0210394_1000019164	3300021420	Soil	MASPAVSNKFRAVLCRHCAKPIRIPALVMKKESEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPALGDCKAASA
Ga0210394_102701112	3300021420	Soil	MSSPVVSGKFRAVLCRHCAKPIRVPALVMKKESEFQALTDSGDINYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKAASA
Ga0210384_116948541	3300021432	Soil	MSSPVVSEKFRAVVCRHCSKPIRVPGLITRKEIEFRGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPFARAASATDCNAAAL
Ga0210398_100617283	3300021477	Soil	MASPVVSEKFRAVVCRHCSKPIRVPGLVSRKEIEFQGLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFALAASATDRKSAAL
Ga0210398_102433602	3300021477	Soil	MASPAVSSKFRAVVCRHCAKPIRVPALIMKKETEFQALTDSNDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAAASTDCKSAAF
Ga0210402_100535366	3300021478	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKETDFQSLTDSSDIHYHLVSRVFNVRCRCCERESVYSINQIIDYPFALAPAPGDCKSASL
Ga0126371_100201912	3300021560	Tropical Forest Soil	MTSPVVSESFRAVLCRHCGKPIRVPALVSRRESAFQISGNSNDIHYQLISRVFNVRCRSCERESVYSINQIIDHPHPLGPSAADRKAAAL
Ga0126371_100496233	3300021560	Tropical Forest Soil	MASPVVSERFRAVVCRHCGKPIRVPALVTRRESEFQGLPDSGSMQYQLISRVFNVRCRSCERESVYSINQIIDYAYSPAPSATDRKAAAL
Ga0126371_116790212	3300021560	Tropical Forest Soil	MSSPVVSERFRAVICRHCGKPIRVPALVSRRESEFQISTDPNDVHYQLISRVFNVRCRSCERESVYSINQIVDHPFPLAPSATDRKAASL
Ga0247694_10239891	3300024178	Soil	MASPAMSEKFRAVVCRHCGKPIRVPGLITKKEREFQGLTDSGDMHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLPSSA
Ga0247693_10096531	3300024181	Soil	MASPVVSSKFRAVLCRHCAKPIRVPALIMKKETEFQSLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIIDYPYPLAPSATDREAARL
Ga0247669_10000074	3300024182	Soil	MASPAMSEKFRAVVCRHCGKPIRVPGLITKKEREFQGLTDSGDMHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLPSSATDPKAAAL
Ga0247688_10755151	3300024186	Soil	MASPVVSSKFRAVLCRHCAKPIRVPALIMKKETEFQSLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIIDYPYPLAPSAT
Ga0247676_10319832	3300024249	Soil	MASPAVSNKFRAVLCRHCAKPIRVPALIMKKETEFQSLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLAPSATDREAARL
Ga0179589_101831211	3300024288	Vadose Zone Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLVSRVFNVRCRSCERESVYSINQIVDYPYPLPASAADRNAPAI
Ga0247678_10474822	3300024325	Soil	MASPAVSNKFRAVLCRHCAKPIRVPALIMKKETEFQSLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIIDYPYPLAPSATDREAARL
Ga0179591_11185823	3300024347	Vadose Zone Soil	MASPAVASKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLASSAIQRKAAAF
Ga0179591_11365731	3300024347	Vadose Zone Soil	MSSPAVSTKFRAVLCRHCAKPIRVPSLIMKKEVEFQTLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCNSASL
Ga0207699_103434841	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSERFRAVVCRHCGKPIRVPGLISRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLPAADGREAAAI
Ga0257153_10055094	3300026490	Soil	MASPVVSEKFRAVVCRHCGKPIRVPGLVTRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLASSATDRKAAAV
Ga0257153_10076461	3300026490	Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLAPSATDRKAAAL
Ga0257168_11588152	3300026514	Soil	MSSPVVSEKFRAVVCRHCSKPIRVPGLITRKEIEFQGLTDSGDIHHHLISRVFNVRCRSCERESVYSINQIVDYPFARAASATDREAAAL
Ga0179587_103755231	3300026557	Vadose Zone Soil	MASPAVASKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFP
Ga0209004_10288623	3300027376	Forest Soil	MASPAVSSKFRAVVCRHCGKPIRVPGLITRKELEFQGLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIVDFPYSLAPSGTD
Ga0209735_10012094	3300027562	Forest Soil	MASPAVSEKFRAVVCRHCSKPIRVPGLITRKEIEFRGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPFALAASATDRKAAAL
Ga0209219_11059461	3300027565	Forest Soil	SEKFRAVVCRHCSKPIRVPGLITRKEIEFRGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPFALAASATDRKAAAL
Ga0209625_10761661	3300027635	Forest Soil	MASPVVSEKFRAVVCRHCSKPIRVPGLVTRKEIEFRGLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFARAASATDREAAAL
Ga0209736_12031071	3300027660	Forest Soil	ASPAVSEKFRAVVCRHCSKPIRVPGLITRKEIEFRGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPFALAASATDRKAAAL
Ga0209581_100026186	3300027706	Surface Soil	MASSAVSQRFRAVVCRYCSKPIRVPASVTRRESEFQGITESTSTRHQLISRVFHVRCRCCERESVYSINQIVDFPHPVTCPESDHKAATL
Ga0209166_100408803	3300027857	Surface Soil	MASPVVSEKFRAVVCRHCGKPIRVPGLITRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYAYPMAPSATDRKAAAL
Ga0209167_101038783	3300027867	Surface Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMRKETEFQSLTDSGDIHYHLISRVFNVRCRSCERESVYSIDQIVDYPFPLGPSATDRKAATL
Ga0209067_101095871	3300027898	Watersheds	MSSPAVSPKLRAVLCRHCGKPIRVPALVMKRESEALGLTDTGDIHYQLVSRVFNVRCRSCERESVYSINQIVDYPFPLGPSATDRKAASL
Ga0209698_100455345	3300027911	Watersheds	MSSPVVSERFRAVVCRHCGKPIRVPALVSRREIEFHSLTDSTSTQYQLISRVFNVRCRCCERESVYSINQIVDFPHPVTCPEQDRNPATL
Ga0209526_104792262	3300028047	Forest Soil	MASPVVSEKFRAVVCRHCSKPIRVPGLVTRKEIEFQGLTDSGDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFALAASATDRKSAAL
Ga0222749_101004411	3300029636	Soil	MASPAISSKFRAVVCRHCGKPIRVPGLISRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPHPLGPSPTDNKTAALESTSQATRYV
Ga0170834_1075570832	3300031057	Forest Soil	MASPAVSTKFRAVLCRHCAKPIRVPALIMKKETEFQTLTDSGDIHYHLISRVFNVRCRCCERESVYSINQIVDYPFAMVPAPGDCKSASL
Ga0170834_1109192032	3300031057	Forest Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKSASL
Ga0170834_1129407671	3300031057	Forest Soil	MSSPAVSTKFRAVLCRHCAKPIRVPSLIMKKEVEFQTLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPASGDCKSASL
Ga0170822_150093502	3300031122	Forest Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESDFQSLTDSSDIHYHLVSRVFNVRCRCCERESVYSINQIIDYP
Ga0170823_121018681	3300031128	Forest Soil	MASPAVSSKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPA
Ga0170824_1204126551	3300031231	Forest Soil	MASPVVSEKFRAVVGRHCGKPIRVPGLVTRKELEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDYPYPLASSATDRKAAAV
Ga0170818_1074560001	3300031474	Forest Soil	MSSPAVSTKFRAVLCRHCAKPIRVPSLIMKKEVEFQTLTDSSDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKSASL
Ga0307474_104461842	3300031718	Hardwood Forest Soil	MASPAVSGKFRAVLCRHCAKPIRVPSLVMKKETEFQTLTDSSDINYHLISRVFNVRCRCCERESVYSINQIIDYPFAMVPNSKDCKSASA
Ga0307469_105702411	3300031720	Hardwood Forest Soil	MASPAVASKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPFPLGAFSPDHKGASL
Ga0307469_112284841	3300031720	Hardwood Forest Soil	SPVVSEKFRAVVCRHCGKPIRVPGLISRKEIEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDCPFPLGSSATDRKAAAF
Ga0307468_1000584012	3300031740	Hardwood Forest Soil	MASPAVASKFRAVLCRHCAKPIRVPALIMKKESEFQSLTDSSDIHYHLISRVFNVRCRSCERESVYSINQIVDYPLPLGPAATNRKAAAF
Ga0307475_110300602	3300031754	Hardwood Forest Soil	KFRAVLCRHCAKPIRVPALIMKKEAAFQTLADSGDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAPAPGDCKAASA
Ga0306921_100171818	3300031912	Soil	MASPVVSERFRAVVCRHCGKPIRVPALVTRRESEFQGLSDSGSMQYQLISRVFNVRCRSCERESVYSINQIIDYAYSLAPSATDRKAAAL
Ga0306926_116642841	3300031954	Soil	MSSPVVSERFRAVLCRHCGKPIRVPALVSRRESEFQISGDPNDVHYQLISRVFNVRCRSCERESVYSINQIVDHP
Ga0306922_104969742	3300032001	Soil	MASPVVSERFRAVVCRHCGKPIRVPALVTRRESEFQGLSDSGSMQYQLISRVFNVRCRSCERESVYSINQIIDYAYSLAPSATDRKAATL
Ga0307470_103099882	3300032174	Hardwood Forest Soil	MASPAVSSKFRAVVCRHCAKPIRVPALVMKKETEFQALTDSNDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAIAAASTDCKSAAF
Ga0307471_1000948884	3300032180	Hardwood Forest Soil	MASPAVASKFRAVLCRHCAKPIRVPALIMKKEAEFQTLTDTGDIHYHLISRVFNVRCRCCERESVYSINQIVDSPYPLAPCSPDRKAASL
Ga0307471_1001761333	3300032180	Hardwood Forest Soil	MASPVVSEKFRAVVCRHCGKPIRVPGLISRKEIEFQGLTDSGDVHYHLISRVFNVRCRSCERESVYSINQIVDCPFPLGSSATDRKAAAF
Ga0307471_1001968253	3300032180	Hardwood Forest Soil	MASPAVSSKFRAVVCRHCAKPIRVPALVMKKETEFQALTDSNDIHYHLISRVFNVRCRCCERESVYSINQIIDYPFAMAAASTDCKSAAF
Ga0307471_1038859202	3300032180	Hardwood Forest Soil	VSGKFRAVLCRHCAKPIRVPSLVMKKETEFQTLTDSSDINYHLISRVFNVRCRCCERESVYSINQIIDYPFAMVPNSKDCKSASA
Ga0335085_100085782	3300032770	Soil	MSSPVVSERTRAVVCRYCGKGIRVPALVTRREAEVRGLSDSGNAEYQLISRVFNVRCRCCERESVYSVNQIVDHTFPLNCEEVAHKAASA
Ga0335085_100986154	3300032770	Soil	MSSSVVSERYRAVVCRHCGKPIRVPSLVTRRETESQGLTDSASLQYQLISRVFNVRCRCCERESVYSINQIVDFPHAITCPEPDHTATL
Ga0335085_103821022	3300032770	Soil	MSSSVVSERYRAVVCRHCGKPIRVPTLVSRRETEFQGLTDSTSLQYQLISRVFNVRCRCCERESVYSINQIVDFPHPVTCPEPDRDIATL
Ga0335082_109426502	3300032782	Soil	MASPVVSERFRAVVCRHCGKPIRVPSLVTRRESEFQGLSDSGSAQYQLISRVFNVRCRSCERESVYSINQIVDSAYPLAPSATDRKAAA
Ga0335070_10000004145	3300032829	Soil	MSSPVVSERFRAVVCRHCGKPIRVPALVTRRESQFQEISDSSSAQYQLISRVFNVRCRCCERESVYSINQIVEFSHPAACPESNRTAAAV
Ga0335069_100217234	3300032893	Soil	MASQVVSERFRAVVCRHCGKPIRVPALVTRRESEFQGLSDSGSVQYQLISRVFNVRCRSCERESVYTINQIIDYAYQLGPSG
Ga0335069_100918923	3300032893	Soil	MSSPVVSKRVRAVVCRHCGKPICVPALVTRRESQFRELSDSTSVQYQLISRVFNVRCRCCERESVYSINQIVDFPHPVACPEAESSAAIL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050739

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences