NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F050727

Metagenome / Metatranscriptome Family F050727

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F050727
Family Type Metagenome / Metatranscriptome
Number of Sequences 145
Average Sequence Length 50 residues
Representative Sequence MTGMAQPASPLSVGSLTQLTLSLIAIVALILAISWALKRLKLAGPRGS
Number of Associated Samples 114
Number of Associated Scaffolds 145

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.54 %
% of genes near scaffold ends (potentially truncated) 93.79 %
% of genes from short scaffolds (< 2000 bps) 87.59 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (63.448 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(24.828 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.414 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 44.74%    β-sheet: 0.00%    Coil/Unstructured: 55.26%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 145 Family Scaffolds
PF01052FliMN_C 79.31
PF02154FliM 12.41
PF03748FliL 5.52
PF02518HATPase_c 1.38
PF00486Trans_reg_C 0.69
PF04347FliO 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 145 Family Scaffolds
COG1868Flagellar motor switch protein FliMCell motility [N] 12.41
COG1580Flagellar basal body-associated protein FliLCell motility [N] 5.52
COG3190Flagellar biogenesis protein FliOCell motility [N] 0.69


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.45 %
UnclassifiedrootN/A36.55 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000546|LJNas_1028444All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae599Open in IMG/M
3300001403|JGI20205J14842_1029534All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria562Open in IMG/M
3300001593|JGI12635J15846_10812172Not Available536Open in IMG/M
3300002245|JGIcombinedJ26739_100334404All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1396Open in IMG/M
3300002245|JGIcombinedJ26739_100560731All Organisms → cellular organisms → Bacteria → Proteobacteria1019Open in IMG/M
3300002245|JGIcombinedJ26739_101294002All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria620Open in IMG/M
3300004091|Ga0062387_101099908All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria616Open in IMG/M
3300005538|Ga0070731_10439117All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria868Open in IMG/M
3300005538|Ga0070731_10555030All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria765Open in IMG/M
3300005541|Ga0070733_10834609All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria619Open in IMG/M
3300005610|Ga0070763_10785318All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria562Open in IMG/M
3300005921|Ga0070766_10106149All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1670Open in IMG/M
3300005921|Ga0070766_10754698All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria661Open in IMG/M
3300005994|Ga0066789_10112040All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1169Open in IMG/M
3300006163|Ga0070715_10119571All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales1254Open in IMG/M
3300007265|Ga0099794_10308460All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae820Open in IMG/M
3300009500|Ga0116229_10234395All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1567Open in IMG/M
3300009500|Ga0116229_11014697All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria667Open in IMG/M
3300009510|Ga0116230_10691851All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria765Open in IMG/M
3300009510|Ga0116230_11245025Not Available535Open in IMG/M
3300009635|Ga0116117_1226499Not Available500Open in IMG/M
3300009697|Ga0116231_10614945Not Available593Open in IMG/M
3300009701|Ga0116228_10447750All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria888Open in IMG/M
3300009701|Ga0116228_10495318All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae837Open in IMG/M
3300009709|Ga0116227_11308922Not Available544Open in IMG/M
3300009787|Ga0116226_10593697All Organisms → cellular organisms → Bacteria → Proteobacteria1109Open in IMG/M
3300010867|Ga0126347_1277029All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae1428Open in IMG/M
3300011269|Ga0137392_10316919All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1290Open in IMG/M
3300012203|Ga0137399_11360614All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria595Open in IMG/M
3300012359|Ga0137385_11071600All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria664Open in IMG/M
3300012924|Ga0137413_10506504All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae889Open in IMG/M
3300012924|Ga0137413_11033480Not Available646Open in IMG/M
3300012927|Ga0137416_10774250All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales847Open in IMG/M
3300012927|Ga0137416_11306701All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria655Open in IMG/M
3300013832|Ga0120132_1082010All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria660Open in IMG/M
3300014156|Ga0181518_10296001All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria807Open in IMG/M
3300014493|Ga0182016_10817081Not Available518Open in IMG/M
3300014501|Ga0182024_11329647All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales831Open in IMG/M
3300014501|Ga0182024_11529907All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria760Open in IMG/M
3300014638|Ga0181536_10003287All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria17673Open in IMG/M
3300014658|Ga0181519_10366289All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae892Open in IMG/M
3300015067|Ga0167640_126243Not Available513Open in IMG/M
3300015171|Ga0167648_1026474All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1401Open in IMG/M
3300015203|Ga0167650_1007565All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3180Open in IMG/M
3300015264|Ga0137403_10138330All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2411Open in IMG/M
3300019787|Ga0182031_1112414All Organisms → cellular organisms → Bacteria → Proteobacteria779Open in IMG/M
3300019787|Ga0182031_1559764All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1824Open in IMG/M
3300019890|Ga0193728_1144137All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1055Open in IMG/M
3300020001|Ga0193731_1153618Not Available563Open in IMG/M
3300020034|Ga0193753_10158408All Organisms → cellular organisms → Bacteria → Proteobacteria1072Open in IMG/M
3300020579|Ga0210407_10384511All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae1098Open in IMG/M
3300020579|Ga0210407_10859452All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria697Open in IMG/M
3300020579|Ga0210407_11069442All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae613Open in IMG/M
3300020580|Ga0210403_10603658All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales886Open in IMG/M
3300020580|Ga0210403_11067328All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria629Open in IMG/M
3300020581|Ga0210399_10447927All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1075Open in IMG/M
3300021086|Ga0179596_10588501Not Available564Open in IMG/M
3300021168|Ga0210406_10138512All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2047Open in IMG/M
3300021170|Ga0210400_11524061Not Available529Open in IMG/M
3300021170|Ga0210400_11611847Not Available512Open in IMG/M
3300021178|Ga0210408_10213495All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales1535Open in IMG/M
3300021181|Ga0210388_11559856Not Available550Open in IMG/M
3300021403|Ga0210397_10907238All Organisms → cellular organisms → Bacteria → Proteobacteria682Open in IMG/M
3300021404|Ga0210389_11180174Not Available590Open in IMG/M
3300021405|Ga0210387_10140547All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2058Open in IMG/M
3300021405|Ga0210387_11623348Not Available550Open in IMG/M
3300021406|Ga0210386_10682847All Organisms → cellular organisms → Bacteria → Proteobacteria885Open in IMG/M
3300021406|Ga0210386_10998583All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria714Open in IMG/M
3300021407|Ga0210383_10344969All Organisms → cellular organisms → Bacteria → Proteobacteria1283Open in IMG/M
3300021420|Ga0210394_10514036All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales1053Open in IMG/M
3300021474|Ga0210390_10421081All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1128Open in IMG/M
3300021474|Ga0210390_10437160All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales1105Open in IMG/M
3300021475|Ga0210392_10084056All Organisms → cellular organisms → Bacteria → Proteobacteria2056Open in IMG/M
3300021477|Ga0210398_10076090All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2727Open in IMG/M
3300021478|Ga0210402_11553602Not Available589Open in IMG/M
3300023101|Ga0224557_1083536All Organisms → cellular organisms → Bacteria → Proteobacteria1343Open in IMG/M
3300024182|Ga0247669_1043257Not Available751Open in IMG/M
3300024275|Ga0247674_1019209All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium788Open in IMG/M
3300025862|Ga0209483_1245968All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria692Open in IMG/M
3300026557|Ga0179587_10113983All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1651Open in IMG/M
3300027496|Ga0208987_1054616All Organisms → cellular organisms → Bacteria → Proteobacteria719Open in IMG/M
3300027583|Ga0209527_1053362All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium911Open in IMG/M
3300027807|Ga0209208_10043871All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4066Open in IMG/M
3300027807|Ga0209208_10217053All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1046Open in IMG/M
3300027853|Ga0209274_10556292Not Available594Open in IMG/M
3300027867|Ga0209167_10566958All Organisms → cellular organisms → Bacteria → Proteobacteria622Open in IMG/M
3300027889|Ga0209380_10183454All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1227Open in IMG/M
3300027889|Ga0209380_10410567All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium794Open in IMG/M
3300027895|Ga0209624_10121488All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales1716Open in IMG/M
3300027895|Ga0209624_10402574All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium912Open in IMG/M
3300027898|Ga0209067_10176864All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae1140Open in IMG/M
3300027903|Ga0209488_10142463All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1809Open in IMG/M
3300027908|Ga0209006_10061583All Organisms → cellular organisms → Bacteria → Proteobacteria3355Open in IMG/M
3300027908|Ga0209006_11504788Not Available509Open in IMG/M
3300028536|Ga0137415_11121056Not Available600Open in IMG/M
3300028536|Ga0137415_11165341Not Available585Open in IMG/M
3300028565|Ga0302145_10021245All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium2380Open in IMG/M
3300028747|Ga0302219_10275503All Organisms → cellular organisms → Bacteria → Proteobacteria653Open in IMG/M
3300028748|Ga0302156_10377090Not Available621Open in IMG/M
3300028813|Ga0302157_10637988Not Available546Open in IMG/M
3300028906|Ga0308309_10915043All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae761Open in IMG/M
3300029636|Ga0222749_10831676Not Available505Open in IMG/M
3300029883|Ga0311327_10511003All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae735Open in IMG/M
3300029920|Ga0302142_1224730Not Available569Open in IMG/M
3300029939|Ga0311328_10919635Not Available575Open in IMG/M
3300029945|Ga0311330_11107604Not Available578Open in IMG/M
3300029984|Ga0311332_11767313Not Available503Open in IMG/M
3300030020|Ga0311344_11450430Not Available500Open in IMG/M
3300030053|Ga0302177_10214469All Organisms → cellular organisms → Bacteria → Proteobacteria1055Open in IMG/M
3300030494|Ga0310037_10441705Not Available534Open in IMG/M
3300030618|Ga0311354_11080051All Organisms → cellular organisms → Bacteria → Proteobacteria734Open in IMG/M
3300030693|Ga0302313_10287677All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria656Open in IMG/M
3300030693|Ga0302313_10413244Not Available536Open in IMG/M
3300030737|Ga0302310_10190676All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales1204Open in IMG/M
3300030737|Ga0302310_10371779All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae788Open in IMG/M
3300030763|Ga0265763_1024779All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria652Open in IMG/M
3300030862|Ga0265753_1069671All Organisms → cellular organisms → Bacteria → Proteobacteria662Open in IMG/M
3300030872|Ga0265723_1030092Not Available520Open in IMG/M
3300030963|Ga0265768_118281Not Available502Open in IMG/M
3300031018|Ga0265773_1003409All Organisms → cellular organisms → Bacteria → Proteobacteria1040Open in IMG/M
3300031027|Ga0302308_10699954Not Available574Open in IMG/M
3300031231|Ga0170824_111387465Not Available594Open in IMG/M
3300031231|Ga0170824_113118520Not Available607Open in IMG/M
3300031258|Ga0302318_10364553All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria726Open in IMG/M
3300031446|Ga0170820_17718946Not Available614Open in IMG/M
3300031525|Ga0302326_12902286Not Available589Open in IMG/M
3300031525|Ga0302326_13723121Not Available502Open in IMG/M
3300031708|Ga0310686_100188345Not Available598Open in IMG/M
3300031726|Ga0302321_101682249All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae734Open in IMG/M
3300031753|Ga0307477_11074682Not Available526Open in IMG/M
3300031823|Ga0307478_10208665All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1574Open in IMG/M
3300031823|Ga0307478_10836708All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria770Open in IMG/M
3300032895|Ga0335074_11138791All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae667Open in IMG/M
3300032955|Ga0335076_11355121Not Available597Open in IMG/M
3300033755|Ga0371489_0328892Not Available726Open in IMG/M
3300033982|Ga0371487_0313081Not Available702Open in IMG/M
3300033983|Ga0371488_0510313Not Available542Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.66%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.59%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated7.59%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.90%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog6.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.21%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.83%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.76%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.76%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.07%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.07%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.07%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog2.07%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost2.07%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.07%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.38%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.38%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.38%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.38%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.69%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.69%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.69%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.69%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.69%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.69%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.69%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.69%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.69%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000546Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300001403Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009510Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009635Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10EnvironmentalOpen in IMG/M
3300009697Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009701Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300010867Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013832Permafrost microbial communities from Nunavut, Canada - A3_5cm_0MEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300014658Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaGEnvironmentalOpen in IMG/M
3300015067Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7A, Adjacent to main proglacial river, mid transect (Watson river))EnvironmentalOpen in IMG/M
3300015171Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300015203Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300023101Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14EnvironmentalOpen in IMG/M
3300024182Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10EnvironmentalOpen in IMG/M
3300024275Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15EnvironmentalOpen in IMG/M
3300025862Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027496Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027807Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028565Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3EnvironmentalOpen in IMG/M
3300028747Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028748Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2EnvironmentalOpen in IMG/M
3300028813Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029883I_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029920Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3EnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029984I_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030020II_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030693Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2EnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030763Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030872Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030963Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031018Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031027Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033755Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fractionEnvironmentalOpen in IMG/M
3300033982Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fractionEnvironmentalOpen in IMG/M
3300033983Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
LJNas_102844413300000546Quercus RhizosphereMTAMAQPVSPLSIGSLTQLTLSLIAIVALILAIGWVL
JGI20205J14842_102953413300001403Arctic Peat SoilMTGIAQPASPLSVGSLTQLTLSLLAIVGLILLISWALKRLKVAGPRGSGEIAVIDELS
JGI12635J15846_1081217213300001593Forest SoilMNAMAQPASPLSIGSLAQLTLSLIAIVALILAIGWVLKR
JGIcombinedJ26739_10033440433300002245Forest SoilMSAMAQPASPLSIGSLTQLTLSLIAIVALILAIGWVLKRFKL
JGIcombinedJ26739_10056073133300002245Forest SoilMTGLAQPASPLSAGSLTQLTLSLLAIVALILAISWALKRLKLAGPRGSG
JGIcombinedJ26739_10129400213300002245Forest SoilMTVMAPSASPLSVGSLTQLTLSLIAIVVLIFALGWVLKRFKLTTPR
Ga0062387_10109990823300004091Bog Forest SoilMTLAQPASPLSVGSLTQLTLSLIAIVALIFAISWALKRLKLAGPRGAGEIAVLDEVSVGPRER
Ga0070731_1043911733300005538Surface SoilMTGMAQPASPLSVSSLAQLTLSLLAIVVLIFAISWALKRLKMAGPRGAGDISVLDELSVGPRDRIV
Ga0070731_1055503013300005538Surface SoilMMQPASPLSAGSLAQLTLSLIAIVALILALSWALKRLKIGAPRSRGDMAVL
Ga0070733_1083460933300005541Surface SoilMTAMAQSASPLSIGSLAQLTFSLIAIVALIVAIGWV
Ga0070763_1078531813300005610SoilMTAMAQPASPLSIGSLAQLSLSLIAIVALILAIGWVLKRFKLSAPRGSVDSEVLDQLS
Ga0070766_1010614913300005921SoilMTGMVQPSPLSVGSMAQLTLSLIAIVALILAISWMMKRLKLAGPRGTGEIAVIDQVSV
Ga0070766_1075469833300005921SoilMTGMAQPASPLSVSSLAQLTLSLLAIVVLIFAISWALKRLRMAGPRGAGDIAVLDELSVG
Ga0066789_1011204013300005994SoilMMGLAQPASPLSVGSLTQLTLSLVAIVALILAISWALKRL
Ga0070715_1011957133300006163Corn, Switchgrass And Miscanthus RhizosphereMTGLAQPASPLSVGSVAQLTLSLIAIVALILAISWAL
Ga0099794_1030846013300007265Vadose Zone SoilMTGMAQPASPLSVGSLTQLTLSLIAIVALILVISWALKRLKLAGPRGSGEIAVID
Ga0116229_1023439513300009500Host-AssociatedVTGISPTASPLSIGSLAQLTLSLIAIVALIFAIGWVLKRFK
Ga0116229_1101469713300009500Host-AssociatedMTAMAQPASPLSVSSVAQLTLSLVAIVALIFALSWVLKRFKIAGPRGRGEISVIDELAVG
Ga0116230_1069185113300009510Host-AssociatedMGGTMSPASPLSTGSLAQLTLSLVAVVGLIFAISWLLKRFRI
Ga0116230_1124502523300009510Host-AssociatedVTAMSQSASPLSIGSLAQLTLILCAIVALILAISWLLKRFKVALPRGSGDMTVLDQVAIG
Ga0116117_122649913300009635PeatlandMTGMAQPASSLSVSSMAQLTLSLIAIVGLIFAIGWV
Ga0116231_1061494533300009697Host-AssociatedVNGGVAQSGMPASAGSLAQLTLSLLLILGLIFALSWALKRFK
Ga0116228_1044775013300009701Host-AssociatedMTGMVQPASPLSVSSLAQLTLSLVAVVALIFAISWALKRLKLAGPRGRGEIAVLDELAVGPRD
Ga0116228_1049531833300009701Host-AssociatedVTQSVSPLSAGSLAQLTLSRAAIVALIFAISWLLKRFKVTLPQGSGDMAVLDQ
Ga0116227_1130892213300009709Host-AssociatedMTGIAPPVSPLSVGSLTQLTLSLAAIVALILAISWALKRFKLAGPRG
Ga0116226_1059369713300009787Host-AssociatedMTAIAQPASPLSVSSVAQLSLSLVAIVALIFALSWALKRFK
Ga0126347_127702933300010867Boreal Forest SoilMTGMAQPASPLSVSSLSQLSLSVIAIVVLILAISWALKRLRMTGARGSGGMVVLDELSVGPR
Ga0137392_1031691913300011269Vadose Zone SoilVNGLSQSGSPLSVSSLAQLTLSLVALVGLIFAISWVLKRLKVSAPRGGRGQIAVLDELT
Ga0137399_1136061433300012203Vadose Zone SoilMTEMAQPASPLSVGSLTQLSLSLIAIVALILVISW
Ga0137385_1107160033300012359Vadose Zone SoilVNGLAQPASPLSVSSLAQLTLSLVAIVGLIFAISWVLKRLKVSAPRGGRGQI
Ga0137413_1050650413300012924Vadose Zone SoilMAQPASPLSVSSLAQLTLSLIAIVGLIFAISWALKRFKL
Ga0137413_1103348033300012924Vadose Zone SoilVTGLSQSASPLSVSSLAQLTLSLVAIVGLIFAISWVLRRLKVSAPRGGRGQIAVLDELTLGAR
Ga0137416_1077425013300012927Vadose Zone SoilMTGLPQAASPLSVSSLAQLTLSLVAIVALIFAISWV
Ga0137416_1130670113300012927Vadose Zone SoilMTGLSQPVSPLSVSSLAQLTLSLVAIVGLIFAISWVLKRLKV
Ga0120132_108201033300013832PermafrostMTGMAHPASPLSVGSLSQLTLSLIAIVVLILAISLALKRLKMTGP
Ga0181518_1029600133300014156BogVTGLAQSASPLSVGSLTQLTLSLLAIVALIIAISWALKRLKVAGPRGRGEIAVVD
Ga0181537_1042053233300014201BogVTGLGTPASPLSVGSVAQLALSLAAIIGLILAVSWVLKRMKLGTVRGRGEIAIIDQLALGPCE
Ga0182016_1081708113300014493BogMMQPASPLSVGSLAQLTLSLIAVVALIVGLSWALKRLRVGTPK
Ga0182024_1132964713300014501PermafrostMTGMAQPASPLSVSSLSQLTLSLIAIVVLILAISWALKR
Ga0182024_1152990713300014501PermafrostMTAMVQPASPLSVGSLTQLTLSLIAIVALIFAIGWVLKRFKLSAP
Ga0181536_1000328713300014638BogMTGIGQPASPLSVSSLAQLTLSLIAIVALILAVSWVLKRFKLAGPRGRGEITVL
Ga0181519_1036628913300014658BogMTGMAQPASPLSVGSLAQLTLSLIAIVALILAISWALKRLKMAGPRGAGDIAVLDELSI
Ga0167640_12624323300015067Glacier Forefield SoilVNGLSQSGSPLSVSSLAQLTLSLVAIVGLIFAISWVLRRLKVSAPRGGRGQIA
Ga0167648_102647413300015171Glacier Forefield SoilMTGLAQPASPVSVGSMAQITLSLVAIIALIFAISWVLKRARLGVAR
Ga0167650_100756573300015203Glacier Forefield SoilMTGLAQPASPVSVGSMAQITLSLVAIIALIFAISWVLKRARLGVARGRGQ
Ga0137403_1013833013300015264Vadose Zone SoilMTGLSQPGSPLSVSSLAQLTLSLVAIVGLIFAISWVLKRLKVSA
Ga0187855_1000176313300018038PeatlandVTTLAAPASPLSVGSVAQLTLSLAAIVALIFAVSWIVKRLKLGTLQSRGE
Ga0182025_125518123300019786PermafrostVTSLASPASPLSVGSVAQLTLSLAAIVALIFAVSWIVKRLKLGTLAAAATSP
Ga0182031_111241413300019787BogMTGMAQPASSLSVSSMAQLTLSLIAIVALIFAIGWVLKRFKLGNLRSRGAI
Ga0182031_155976413300019787BogMTGMAQPASPLSVGSLTQLSLSLIAIVGLILAISWALKRLKLTHPRGSGEIAVIDELGVGPRE
Ga0193728_114413713300019890SoilMTGMAQPASPLSAGSLTQLTLSLIAIVALILVISWALKRLKLAGPRGS
Ga0193731_115361823300020001SoilMTGLSQPASPLSVSSLAQLTLSLVAIVGLIFAISWVLRRLKVSAPRGGRGQIAVLDELTVGAR
Ga0193753_1015840813300020034SoilMTAMAQPASPLSVGSLTQLTLSLIAIVALIVAIGWVLKRFKLSAPRGSRDSEVLEQLNL
Ga0210407_1038451133300020579SoilMTGMAQPASPLSVGSLTQLTLSLIAIVALILVISWALKRLKMAGPRGSGN
Ga0210407_1085945233300020579SoilMTGMAQPASPLSVGSLTQLTLSLIAIVALILVISWALKRLKL
Ga0210407_1106944213300020579SoilMTGVAQSASPLSVGSMAQLTLSLIAIVALIFAISWVLKRLKLAGPR
Ga0210403_1060365813300020580SoilVTAMAQPGSPLSVGSLTQLTLSLVAIVALILAIGWVMKRFKLAAPRGSLDSSVLEEL
Ga0210403_1106732833300020580SoilMTGLSQPVSPLSVGSLTQLTLSLIAIVALILAISWALKRFKLAGPRSSGD
Ga0210399_1044792713300020581SoilVNGLSQQASPLSVSSLAQLTLSLVAIVGLIFAISWVLKRLKVSAPRGGR
Ga0179596_1058850123300021086Vadose Zone SoilVTSLAQPASPLSVSSLAQLTLSLLAIVGLIFAISWALKRFKLAGPRGRGRITVVD
Ga0210406_1013851213300021168SoilMTGLAQPASPLSVGSLTQLTLSLLAIVALILAISWALKRLKLAGPRG
Ga0210400_1152406113300021170SoilMTAMAQPASPLSIGSLTQLSLSLIAIVALILAIGWVLKRFKL
Ga0210400_1161184723300021170SoilMTGMAQPASPLSVGSLTQLTLSLIVIVALILVIGWALKRLKLA
Ga0210408_1021349543300021178SoilMTGMAQPASPLSVGSLTQLTLSLIAIVALILVISW
Ga0210396_1145942723300021180SoilVTSLAAPASPLSVGSVAQLTLSLAAIVALIFAVSWIVKRLKLGHPRSRG
Ga0210388_1155985613300021181SoilMTAMAQPVSPLSVGSLTQLTLSLVAIVALILAIGWVLKRF
Ga0210397_1090723833300021403SoilMTAMAQPASPLSIGSLTQLTLSLIAIVALILAIGWVLKRF
Ga0210389_1118017413300021404SoilMTGMVQPASPLSVGSMAQLTLSLIAIVVLIVVIGWALKRLKLAGP
Ga0210387_1014054743300021405SoilMTGLAQPASPLSAGSLTQLTLSLLAIVALILAISWALKRLKLAGPRGSGGIAVI
Ga0210387_1162334813300021405SoilMTGLSQPGSPLSVSSLAQLTLSLVVIVGLIFAISWVLKRLKV
Ga0210386_1068284713300021406SoilMTAMAQPASPLSIGSLTQLTLSLIAIVALIVAIGWVLKRFK
Ga0210386_1089827313300021406SoilVNGLVQPASPVSVGSVAQLALSLAAIIALILAVSWVLKRLKLGTVRGRGEI
Ga0210386_1099858333300021406SoilMTGMAQPASPLSVSSLAQLTLSLLAIVVLIFAISWALKRLRMAGP
Ga0210383_1034496913300021407SoilMTAMAQAASPLSIGSLAQLTLSLIAIVALILAIGWVLKRFKLN
Ga0210394_1051403613300021420SoilVTAMAQPVSPLSVGSLTQLTLSLVAIVALIFAIGWVMKRFKLAAPRGSLDSGV
Ga0210390_1042108113300021474SoilMTGMAQPASPLSVSSLAQLTLSLLAIVVLIFAISWALKRLR
Ga0210390_1043716033300021474SoilMTGMVQPSPLSVGSMAQLTLSLIAIVALILAISWMMKRLKL
Ga0210392_1008405643300021475SoilMTAMVQPASPLSVGSLTQLTLSLIAIVALIFAIGWVLKRFKLSAPRGSRDSEVLEQLNLGPRE
Ga0210398_1007609013300021477SoilMTGMAQPASPLSVGSLAQLTLSLLAIVVLIFAISWALKRLRMAGPRGAGDIAVLDEL
Ga0210402_1155360213300021478SoilMTGISQPVSPLSVGSLTQLTLSLVAIVALILAISWALKRFKLAGPRG
Ga0224557_108353613300023101SoilMTGMAQPASSLSVSSMAQLTLSLIAIVALIFAIGWVLKRFKLGNLRSRGAITVLDELAL
Ga0247669_104325713300024182SoilMTGLAQPASPLSVGSVAQLTLSLIAIVALILAISWALKKLKLAGPRSSGGIA
Ga0247674_101920913300024275SoilMTGLAQPASPLSVGSVAQLTLSLIAIVALILAISWALKKLKLAGPRSSG
Ga0209483_124596833300025862Arctic Peat SoilMTGTAQAASPLSVGSLTQLTLSLIAIVALIIAISWALKRLKLAGPRGSGEIAVIDELGLG
Ga0179587_1011398343300026557Vadose Zone SoilMTGMAQPASPLSVGSLWQLCFSLFAIVALILVISWALKRL
Ga0208987_105461633300027496Forest SoilMTAMAQPASPLSIGSLTQLTLSLIAIVALILAIGWVLKRFKLSTPRGSA
Ga0209527_105336213300027583Forest SoilMTGMAQPASPLSVGSLTQLTLSLIAIVGLILVISWALKRLKLAGPRGSGEIAVIDELSVGPR
Ga0209208_1004387153300027807Host-AssociatedMTGMAQPASPLSVSSVAQLTLSLVAIVALIFAISWLLKRFKLAGPRGHGDIMVLDELAVGPRE
Ga0209208_1021705313300027807Host-AssociatedVTGIPPTASPLSIGSLAQLSLSLIAIVALIFAIGWVLKRFKVAL
Ga0209773_1026852633300027829Bog Forest SoilVNGLVQPASPVSVASVAQLALSLAAIVALILAVSWVLKRLKLGTVRGRG
Ga0209274_1055629223300027853SoilVTGLAQSASPMSVGSLTQLTLSLIAIVGLILAISWALKRLKLASPRGSGAIAVVDELRLG
Ga0209167_1056695813300027867Surface SoilMTAMAQSASPLSIGSLAQLTFSLIAIVALIVAIGWVL
Ga0209380_1018345413300027889SoilMNAMAQPASPLSIGSLAQLTLSLIAIVALILAIGWVLKRFKLN
Ga0209380_1041056733300027889SoilVTGLAQSASPMSVGSLTQLTLSLIAIVGLILAISWALKRLKLASPRGSGAI
Ga0209624_1012148843300027895Forest SoilMMQPALPLSVGSLAQLTLSLIAVVVLILGLSWALKRLRVGAPKGRGAIAVLDELALGPR
Ga0209624_1040257413300027895Forest SoilMNAMASPASPLSIGSLAQLTLSLIAIVALILAIGWVLKRFKLNAPRGSVDSE
Ga0209067_1017686433300027898WatershedsMNPASAASPLSFGSLAQLTLSLLVIVGLILALSWLLKRFRIAVPRSTGSM
Ga0209488_1014246313300027903Vadose Zone SoilMTGLSQPGSPLSVSSLAQLTLSLVAIVGLIFAISWV
Ga0209006_1006158313300027908Forest SoilMTALAQPASPLSVSSLTQLTLSLIAIVALILAISWALKRLKLAGP
Ga0209006_1102807213300027908Forest SoilVTTLAAPASPLSVGSVAQLTLSLAAIVALIFVVSWIVKRLKLGTPRSRGEIAV
Ga0209006_1150478823300027908Forest SoilMTGMAQPASPLSVGSLTQLTLSLIAIVALILAISWALKRLKLAGPRGS
Ga0137415_1112105623300028536Vadose Zone SoilMTGLSQSASPLSVSSLAQLTLSLIAIVGLIFAISWVLKRLKVSAPRGGRGQIA
Ga0137415_1116534113300028536Vadose Zone SoilMTGIAQPASPLSVGSLTQLTLSLVAIVALILAISWVLKRLKLSNPRGS
Ga0302145_1002124553300028565BogMTGMAQPASSLSVSSMAQLTLSLIAIVALIFAIGWVLKRFKLGNLRSRGAITVLD
Ga0302219_1027550313300028747PalsaMTGMASPASPLSVGSLAQLGLSLIAIVALILAMGW
Ga0302156_1037709033300028748BogMTGMAQPASSLSVSSMAQLTLSLIAIVALIFAIGWVLKRFKLGNLRSRGAITVLDELA
Ga0302157_1063798813300028813BogMTVMAQPASPLSVGSLTQLTLSLLAIVALIIVISWALKRLRLTGPRGSGEIAVIDELH
Ga0308309_1091504313300028906SoilMTGMAQPASPLSVSSLAQLTLSLLAIVVLIFAISWALKRLRMAGPRGAGDIAVLDELSVGPRDR
Ga0222749_1083167613300029636SoilMTGLSQPVSPLSVGSLTQLTLSLIAIVALILAISWALK
Ga0311327_1051100313300029883BogMTVMAQPASPLSVGSLTQLTLSLLAIVALIIVISWALKRLRLTGPRGS
Ga0302142_122473013300029920BogMTVMAQPASPLSVGSLTQLTLSLLAIVDLIIVISWALKRLRLTGPRGSG
Ga0311328_1091963533300029939BogVTGLAATSSLAQPASPLSFGSVAQLGLSLAAIVALIFALSWAVKRLK
Ga0311330_1110760433300029945BogVTTLAAPASPLSVGSVAQLTLSLAAIVALIFAVSWIVKRLKLGTLQ
Ga0311332_1176731313300029984FenMIGLSQPASPLSVSSLAQLTLSLVAIVGLIFAISWVLKRLKV
Ga0311344_1131961013300030020BogVTTLAAPASPLSVGSVAQLTLSLAAIVALIFAVSWIVKRLKLGTLQSRGEIVVIDQLALG
Ga0311344_1145043013300030020BogMTVMAQPASPLSVGSLTQLTLSLLAIVALIIVISWA
Ga0302177_1021446913300030053PalsaMNAMAQPASPLSIGSLAQLTLSLIAIVALILAIGWVLKRFKLNAPRGSVDSEILDQL
Ga0310037_1044170513300030494Peatlands SoilMAQPASPLSVGSLTQLSLSLLAIVALIVAVSWALKRLKMAGPRG
Ga0311354_1108005113300030618PalsaMTGMASPASPLSVGSLAQLGLSLIAIVALILAMGWVLKRFKLAS
Ga0302313_1028767733300030693PalsaMTGMAQPASPLSVGSLTQLTLSLMAIVALILAISWVLKRLKLAGPRGSGEITVLEELSVG
Ga0302313_1041324413300030693PalsaMTAMAQPASPLSIGSLTQLTLSLIAIVALILAIGWVLKRFKLNA
Ga0302310_1019067633300030737PalsaVTGVAQSASPLSAGSVTQLCFSLLAIVALIIAVSWLLKRLKMAGPRGRGEI
Ga0302310_1037177913300030737PalsaMTGLAQPASPLSVGSLAQLTLSLIGIVVLILAISWALKRLKLAGPRGSGGMAVVDELSVG
Ga0265763_102477933300030763SoilMTGMAQPASPLTVGSMAQLTLSLIAIVALILAISWVLKRLKLAGPRGTGEIA
Ga0265753_106967133300030862SoilMTAMAQAASPLSIGSLAQLTLSLIAIVALIVAIGWVLKRFKLN
Ga0265723_103009223300030872SoilMTAMAQPASPLSVGSLTQLTLSLVAIVGLILLISWALKR
Ga0265768_11828113300030963SoilMTAMAQPASPLSIGSLAQLTLSLIAIVALILAIGWVLKRFKLNAPRGSVDSEILDQLSV
Ga0265773_100340933300031018SoilMTAMAQAASPLSIGSLAQLTLSLIAIVALIVAIGWVLKRFKLNAPRG
Ga0302308_1069995413300031027PalsaMTGMAQPASPLSVSSLTQLTLSLIAIVALILAISWLLKRLKLASPRGSGQIAVVDELSVGPRE
Ga0170824_11138746533300031231Forest SoilMTGLAQPASPLSVGSVAQLTLSLIAIVALILAISWALKKLKLAG
Ga0170824_11311852033300031231Forest SoilMTAMAQPASPLSIGSLTQLTLSLIAIVALILAIGWVLKRFKLNAPRGSVDSEILDQL
Ga0302318_1036455333300031258BogMNTVSAASPLSFGSMTQLTLSLVLIVGLILGLSWLLKR
Ga0170820_1771894613300031446Forest SoilMTGMPQPASPLSVGSMAQLTMSLIAIVALILVISWALKRLKLAGPRGSGEITVIDQLSVGPRERIV
Ga0302326_1290228623300031525PalsaMTGIAQPASPLSVGSLTQLTLSLIAIVALIFAISWALKRLKLAGPRGSGEIAVLDELSV
Ga0302326_1372312113300031525PalsaVTAPASPLSVGSLAQLTLSLIAIVALIFAISWVLKRFKVALPRGSADMARLDQVAIGP
Ga0310686_10018834523300031708SoilMIQPASPLTAASLAQLTLSLIAVVALIVGLSWALKRLRVGAPKGRGTIAVLDQLALGPR
Ga0302321_10168224933300031726FenMTGLPQPASPLSVGSLTQLTLSLVAIVALILAISWALKRLKLAGPRSSGEIAVIDELSVGPRDRI
Ga0307477_1107468223300031753Hardwood Forest SoilMTGLAQPGSPLSVSSLAQLTLSLVAIVGLIFAISWVLKRLKVS
Ga0307478_1020866543300031823Hardwood Forest SoilMTGLAQPGSPLSVSSLAQLTLSLVAIVGLIFAISWVLKRLKVSAPRGGRGQIAV
Ga0307478_1083670813300031823Hardwood Forest SoilMTGMAQPTSPLSVGSMAQLTLSLIAIVALILAISWMLKRLKLAGSRGSGEISVIDQVSV
Ga0335074_1113879133300032895SoilVTSLASPASPLSAGSLAQLTLSLGAIVALIFAVSWVIKRLKLGNPRSRGDIAVLDELVLG
Ga0335076_1135512113300032955SoilMSAIAQPASPLSIGSLAQLTLSLIAIVALIVAIGWVLKRFKLSTPHGSVDSEVLDQLSVGPR
Ga0371489_0328892_3_1913300033755Peat SoilMTGIGQPASPLSVSSLAQLTLSLIAIVALIFAVSWVLKRFKLAGPRGRGEITVLDELAVGPRE
Ga0371487_0313081_595_7023300033982Peat SoilMTGLAQPASPLSVGSLAQLTLSLIAIVALILALGWA
Ga0371488_0510313_3_1853300033983Peat SoilVTGLAAPASPLSVSSIAQLSLSLVAVVALILGLSWALKRLRVGGAKSRGEIAVIDQLALG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.