NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F050705

Metagenome Family F050705

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F050705
Family Type Metagenome
Number of Sequences 145
Average Sequence Length 47 residues
Representative Sequence MISKTFRIARMIVLASFALSPAAWAATCSNASLSGTYGFLHDGTD
Number of Associated Samples 118
Number of Associated Scaffolds 145

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.53 %
% of genes near scaffold ends (potentially truncated) 91.03 %
% of genes from short scaffolds (< 2000 bps) 84.83 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (56.552 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland
(10.345 % of family members)
Environment Ontology (ENVO) Unclassified
(35.172 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.862 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 32.88%    β-sheet: 0.00%    Coil/Unstructured: 67.12%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 145 Family Scaffolds
PF10282Lactonase 19.31
PF00486Trans_reg_C 5.52
PF13418Kelch_4 2.76
PF07638Sigma70_ECF 2.76
PF01569PAP2 2.07
PF04226Transgly_assoc 1.38
PF07883Cupin_2 1.38
PF00515TPR_1 0.69
PF13419HAD_2 0.69
PF13964Kelch_6 0.69
PF13683rve_3 0.69
PF14534DUF4440 0.69
PF13229Beta_helix 0.69
PF02776TPP_enzyme_N 0.69
PF00589Phage_integrase 0.69
PF13415Kelch_3 0.69
PF03176MMPL 0.69
PF14559TPR_19 0.69
PF13536EmrE 0.69
PF03544TonB_C 0.69
PF00027cNMP_binding 0.69
PF04055Radical_SAM 0.69
PF13432TPR_16 0.69
PF09685DUF4870 0.69
PF02585PIG-L 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 145 Family Scaffolds
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 2.76
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 1.38
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.69
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.69
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 0.69
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.69


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms56.55 %
UnclassifiedrootN/A43.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10010231All Organisms → cellular organisms → Bacteria7929Open in IMG/M
3300002245|JGIcombinedJ26739_100711420All Organisms → cellular organisms → Bacteria → Acidobacteria883Open in IMG/M
3300003505|JGIcombinedJ51221_10395250Not Available561Open in IMG/M
3300004080|Ga0062385_10216997Not Available1044Open in IMG/M
3300004080|Ga0062385_11117502All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300004082|Ga0062384_100055830Not Available1936Open in IMG/M
3300004082|Ga0062384_100448219All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium843Open in IMG/M
3300004092|Ga0062389_100088373All Organisms → cellular organisms → Bacteria2687Open in IMG/M
3300004633|Ga0066395_10075152All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300004635|Ga0062388_100578090Not Available1024Open in IMG/M
3300004635|Ga0062388_102218495Not Available572Open in IMG/M
3300005435|Ga0070714_102407873All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300005458|Ga0070681_11140170Not Available701Open in IMG/M
3300005534|Ga0070735_10551031Not Available685Open in IMG/M
3300005610|Ga0070763_10536577Not Available673Open in IMG/M
3300005921|Ga0070766_10051151All Organisms → cellular organisms → Bacteria2323Open in IMG/M
3300005921|Ga0070766_10488565Not Available817Open in IMG/M
3300005993|Ga0080027_10263678Not Available681Open in IMG/M
3300006052|Ga0075029_100744316Not Available664Open in IMG/M
3300006163|Ga0070715_10667676Not Available617Open in IMG/M
3300006173|Ga0070716_100553935All Organisms → cellular organisms → Bacteria → Acidobacteria858Open in IMG/M
3300009519|Ga0116108_1022706All Organisms → cellular organisms → Bacteria2131Open in IMG/M
3300009523|Ga0116221_1191232Not Available888Open in IMG/M
3300009624|Ga0116105_1022758All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1326Open in IMG/M
3300009635|Ga0116117_1003250All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4352Open in IMG/M
3300009635|Ga0116117_1220307Not Available506Open in IMG/M
3300009644|Ga0116121_1013662All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2635Open in IMG/M
3300009645|Ga0116106_1258176Not Available554Open in IMG/M
3300010343|Ga0074044_10189777All Organisms → cellular organisms → Bacteria1367Open in IMG/M
3300010376|Ga0126381_100040620All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5639Open in IMG/M
3300010376|Ga0126381_101807439Not Available882Open in IMG/M
3300010398|Ga0126383_10030138All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4296Open in IMG/M
3300012205|Ga0137362_10022815All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4853Open in IMG/M
3300012206|Ga0137380_11541334Not Available549Open in IMG/M
3300012362|Ga0137361_10266173All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1564Open in IMG/M
3300014156|Ga0181518_10218453Not Available982Open in IMG/M
3300014160|Ga0181517_10352554All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300014164|Ga0181532_10113275All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae1672Open in IMG/M
3300014169|Ga0181531_10820210Not Available581Open in IMG/M
3300014200|Ga0181526_10855130Not Available572Open in IMG/M
3300014200|Ga0181526_10932601Not Available546Open in IMG/M
3300014489|Ga0182018_10048103All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2620Open in IMG/M
3300014501|Ga0182024_10997723All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium999Open in IMG/M
3300014655|Ga0181516_10510863Not Available617Open in IMG/M
3300015372|Ga0132256_102493087Not Available619Open in IMG/M
3300016319|Ga0182033_10578582Not Available973Open in IMG/M
3300017822|Ga0187802_10088607All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300017822|Ga0187802_10445603Not Available514Open in IMG/M
3300017932|Ga0187814_10293201Not Available622Open in IMG/M
3300017940|Ga0187853_10073999All Organisms → cellular organisms → Bacteria1706Open in IMG/M
3300017940|Ga0187853_10525838All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300017948|Ga0187847_10489400All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300017955|Ga0187817_10208485All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1246Open in IMG/M
3300017959|Ga0187779_11357568All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300017970|Ga0187783_10596973All Organisms → cellular organisms → Bacteria → Nitrospirae799Open in IMG/M
3300017970|Ga0187783_10632971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-13773Open in IMG/M
3300017970|Ga0187783_10723940Not Available718Open in IMG/M
3300017970|Ga0187783_10983373All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300017970|Ga0187783_11367104Not Available510Open in IMG/M
3300017972|Ga0187781_10717260All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300017972|Ga0187781_10946287Not Available628Open in IMG/M
3300017973|Ga0187780_10140211All Organisms → cellular organisms → Bacteria → Acidobacteria1674Open in IMG/M
3300017975|Ga0187782_11209308Not Available591Open in IMG/M
3300017975|Ga0187782_11400332Not Available550Open in IMG/M
3300017995|Ga0187816_10316880Not Available686Open in IMG/M
3300017999|Ga0187767_10058430All Organisms → cellular organisms → Bacteria → Acidobacteria977Open in IMG/M
3300018008|Ga0187888_1176749Not Available859Open in IMG/M
3300018009|Ga0187884_10003534All Organisms → cellular organisms → Bacteria12089Open in IMG/M
3300018013|Ga0187873_1077695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1353Open in IMG/M
3300018013|Ga0187873_1209788All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300018023|Ga0187889_10447180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300018030|Ga0187869_10089562All Organisms → cellular organisms → Bacteria → Acidobacteria1565Open in IMG/M
3300018033|Ga0187867_10492153Not Available675Open in IMG/M
3300018038|Ga0187855_10298217All Organisms → cellular organisms → Bacteria → Acidobacteria943Open in IMG/M
3300018042|Ga0187871_10406030Not Available753Open in IMG/M
3300018047|Ga0187859_10208716Not Available1043Open in IMG/M
3300018047|Ga0187859_10323075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium838Open in IMG/M
3300018062|Ga0187784_10187864All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1687Open in IMG/M
3300018062|Ga0187784_10308040All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group → Xanthomonas citri → Xanthomonas citri pv. aurantifolii → Xanthomonas citri pv. aurantifolii str. ICPB 105351286Open in IMG/M
3300018062|Ga0187784_10940693All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300020580|Ga0210403_10534548Not Available951Open in IMG/M
3300021170|Ga0210400_10559372All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300021170|Ga0210400_10760733Not Available795Open in IMG/M
3300021401|Ga0210393_10353414All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1196Open in IMG/M
3300021402|Ga0210385_10063214Not Available2504Open in IMG/M
3300021406|Ga0210386_10659756All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300021407|Ga0210383_10593171Not Available955Open in IMG/M
3300021420|Ga0210394_11750662All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300021477|Ga0210398_10038460All Organisms → cellular organisms → Bacteria3974Open in IMG/M
3300021560|Ga0126371_13098970All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46562Open in IMG/M
3300021560|Ga0126371_13738188Not Available513Open in IMG/M
3300022521|Ga0224541_1024858All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300022731|Ga0224563_1005057All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola956Open in IMG/M
3300024227|Ga0228598_1016786All Organisms → cellular organisms → Bacteria → Acidobacteria1445Open in IMG/M
3300024227|Ga0228598_1108620Not Available561Open in IMG/M
3300025404|Ga0208936_1000824All Organisms → cellular organisms → Bacteria4066Open in IMG/M
3300025432|Ga0208821_1018776Not Available1539Open in IMG/M
3300025507|Ga0208188_1122544All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300025509|Ga0208848_1116734All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum528Open in IMG/M
3300025905|Ga0207685_10608915Not Available587Open in IMG/M
3300025929|Ga0207664_11044671Not Available731Open in IMG/M
3300027516|Ga0207761_1027682All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin3451123Open in IMG/M
3300027567|Ga0209115_1053688Not Available918Open in IMG/M
3300027609|Ga0209221_1076461Not Available874Open in IMG/M
3300027625|Ga0208044_1210269Not Available517Open in IMG/M
3300027676|Ga0209333_1006314All Organisms → cellular organisms → Bacteria → Acidobacteria3928Open in IMG/M
3300027729|Ga0209248_10239689Not Available530Open in IMG/M
3300027737|Ga0209038_10127186Not Available771Open in IMG/M
3300027768|Ga0209772_10129854Not Available785Open in IMG/M
3300027768|Ga0209772_10298175Not Available511Open in IMG/M
3300027783|Ga0209448_10115421Not Available899Open in IMG/M
3300027824|Ga0209040_10367818All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300027853|Ga0209274_10139329All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1217Open in IMG/M
3300027855|Ga0209693_10482803Not Available594Open in IMG/M
3300027874|Ga0209465_10085961All Organisms → cellular organisms → Bacteria → Acidobacteria1535Open in IMG/M
3300027884|Ga0209275_10381341All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300027986|Ga0209168_10112116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1402Open in IMG/M
3300028747|Ga0302219_10010151All Organisms → cellular organisms → Bacteria → Acidobacteria3530Open in IMG/M
3300028747|Ga0302219_10155089All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300028776|Ga0302303_10070332All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1323Open in IMG/M
3300028776|Ga0302303_10263441Not Available586Open in IMG/M
3300028866|Ga0302278_10142355All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1262Open in IMG/M
3300029919|Ga0302141_1229724All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300029944|Ga0311352_10045677All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4030Open in IMG/M
3300030007|Ga0311338_10966955Not Available830Open in IMG/M
3300030054|Ga0302182_10021768All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2947Open in IMG/M
3300030057|Ga0302176_10117518All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-131045Open in IMG/M
3300030057|Ga0302176_10366127Not Available581Open in IMG/M
3300030058|Ga0302179_10028946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2596Open in IMG/M
3300030399|Ga0311353_10184625Not Available1970Open in IMG/M
3300030509|Ga0302183_10113184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1068Open in IMG/M
3300030687|Ga0302309_10191024All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-131055Open in IMG/M
3300031057|Ga0170834_109935554All Organisms → cellular organisms → Bacteria → Nitrospirae830Open in IMG/M
3300031231|Ga0170824_103293588All Organisms → cellular organisms → Bacteria → Proteobacteria775Open in IMG/M
3300031231|Ga0170824_106777779All Organisms → cellular organisms → Bacteria → Nitrospirae803Open in IMG/M
3300031234|Ga0302325_12089556All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium694Open in IMG/M
3300031524|Ga0302320_10757636All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1086Open in IMG/M
3300031715|Ga0307476_10007436All Organisms → cellular organisms → Bacteria6691Open in IMG/M
3300031910|Ga0306923_11864887Not Available615Open in IMG/M
3300031912|Ga0306921_11079139Not Available901Open in IMG/M
3300032892|Ga0335081_10173695All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3034Open in IMG/M
3300033158|Ga0335077_11949465Not Available547Open in IMG/M
3300033402|Ga0326728_10474897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1028Open in IMG/M
3300034163|Ga0370515_0086327Not Available1359Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland10.34%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland9.66%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.66%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil8.97%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland6.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.21%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.83%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.14%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.14%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.45%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.07%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.07%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.07%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.07%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.07%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.38%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.38%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.38%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.38%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.38%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.38%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.69%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.69%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.69%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.69%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.69%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.69%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.69%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.69%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.69%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.69%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009635Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10EnvironmentalOpen in IMG/M
3300009644Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022521Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24EnvironmentalOpen in IMG/M
3300022731Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4EnvironmentalOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300025404Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025432Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025507Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025509Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027516Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027768Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028747Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028776Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028866Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2EnvironmentalOpen in IMG/M
3300029919Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2EnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030054Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1EnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030509Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2EnvironmentalOpen in IMG/M
3300030687Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1001023153300001593Forest SoilMISKTLRIALTMVLASFALSSAAWAATCSNASLSGTYGFLHGGTDSLGTCQRVEPGHV*
JGIcombinedJ26739_10071142013300002245Forest SoilMTYKMFRIALAIVLASFVLSSAAWAAAKCSNASLSGTYGFLHDGTDGNGTPA
JGIcombinedJ51221_1039525013300003505Forest SoilMISKTLRIARVIILASFALSSAAWAATCSNDSLSGTYGFLHAGVDSHGAPAAAVTQ
Ga0062385_1021699753300004080Bog Forest SoilMISKTFRIARMIALATFAFSSAAWAATCSNASVNGTYGFLHDGTDSNGAPTSAAVT
Ga0062385_1111750213300004080Bog Forest SoilMNFKTLRIARMIVLATFAFSSAAWAATCSNASLSGTYGFL
Ga0062384_10005583013300004082Bog Forest SoilMISKLFCIAGMIVLASFAVRPAAGATCSNASLSGTYGFLHDS
Ga0062384_10044821923300004082Bog Forest SoilMISKTLRIARMIVLATFALSSAAGAATCSNASLSGTYGFLHDGTD
Ga0062389_10008837313300004092Bog Forest SoilMISKVFCAASVIVLASFALSSAAWAAPCSNASLSGTYGWLHGGTAS
Ga0066395_1007515233300004633Tropical Forest SoilLISKTFRIAQMIVVVSFALSPAAWAATCSNASLSGTYGFLHDGTDSNGTPL
Ga0062388_10057809013300004635Bog Forest SoilMISKTFRIARMIALATFAFSSAAWAATCSNASVNGTYGFLHDGTDSNGAP
Ga0062388_10221849513300004635Bog Forest SoilMISKTFRIARIIVLASFALSSAAWAATCSNASLSGTYGFLHDETDSNGAPFTA
Ga0070714_10240787313300005435Agricultural SoilMVSKTFRIARMIVLASFALSSGAWAATCSNASLSGTYGFLHDGTDSNGTPLT
Ga0070681_1114017013300005458Corn RhizosphereMTSKTFRIARMIVLASFALSSAAGTTCSNASLSGTYGFLHDGTDSNGT
Ga0070735_1055103123300005534Surface SoilMNEEKAMISKTFRIARVIVLASFGLSSTAWGATCSSASLSGTYGFQHDGTD
Ga0070763_1053657713300005610SoilMISKVFCAASVIVLASFALSSAAGAATCSNASLSGTYGFLHD
Ga0070766_1005115133300005921SoilMISATPRVALTIVLASFALSSAAWAATCSNASLSGTYGFLHDGTDSKGPLPPPP*
Ga0070766_1048856513300005921SoilVISQTFRIARMIVLASFALSSTAWGATCSNASLSGTYGFLHDGTDSNGAPATAAVS
Ga0080027_1026367813300005993Prmafrost SoilMTYKMFRIALAIFLASVGLDSAAWAAKCSNASLSGTYGFLHDGTDS
Ga0075029_10074431613300006052WatershedsMISKTFRIAQMIVLASFALSSAARATDWAACSNASLSGTYGFLHSGIGPSG
Ga0070715_1066767613300006163Corn, Switchgrass And Miscanthus RhizosphereMSSKTFRIARMIVLASFALSSAAGATCSNASLSGTYGFLHD
Ga0070716_10055393523300006173Corn, Switchgrass And Miscanthus RhizosphereMVSKTFRIARMIVLASFALSSGAWAATCSNASLSGTYGFLH
Ga0116108_102270643300009519PeatlandMISKTFRIARMIVLASFALSSAAWAATCSNTSLSDMSA*
Ga0116221_119123223300009523Peatlands SoilMTHKMFRTALTTVLVSFALSSAAGAATCSDASLSGTYGFLHGG
Ga0116105_102275833300009624PeatlandMISKTIRIARMIVLTSAALSSAAWAAGSTATCSDASLSGTYGFLHSGVTRRGA
Ga0116117_100325013300009635PeatlandMISKTLRIGRMFVLASVSLSSAAWAATCSNASLSGTYGS
Ga0116117_122030713300009635PeatlandMISKMFRMTLTNAVASFALISAAWAATCSNASLNGTYGFLHDTT
Ga0116121_101366213300009644PeatlandMISKTIRIARMIVLTSVALSSAAWAAGSTATCSDASLSGTYGFLHAGVTRRGAPAVAVTQLT
Ga0116106_125817623300009645PeatlandMEESIMISKMFGIAPMIVLAGLALSSAAWATCSNASLSGT
Ga0074044_1018977713300010343Bog Forest SoilMISKTFRIARMIVLASFALSSAAGAATCSNASLSGTYG*
Ga0126381_10004062073300010376Tropical Forest SoilLISKTFRIAQVIVLVSFALSPAARAATCSNASLSGTYGFLHDGTDSNGTPSSAAVSQI
Ga0126381_10180743923300010376Tropical Forest SoilMISKMFRITLGIAIASLALSSAAWAATCSNASLSG
Ga0126383_1003013813300010398Tropical Forest SoilMIVVVSFALSPAAWAATCSNASLSGTYGFLHDGTDSNGTPSSAAVSQ
Ga0137362_1002281563300012205Vadose Zone SoilMISKTFRIARMIVLASFALSSAVWAATCSNASLSGTYGFLHDGTDSNGTPSSA
Ga0137380_1154133413300012206Vadose Zone SoilMISKTFRIARMIVLASFALSPAAWAATCSNASLSGTYGFLHDGTD
Ga0137361_1026617323300012362Vadose Zone SoilMISKTFRIARMIVLASFALSSAVWAATCSNASLSGTYGFLHDGTDSNGTPVTA
Ga0181518_1021845313300014156BogMISKTSCIARMIVLASFALSSAAWAATCSNASLSGTY
Ga0181517_1035255413300014160BogMISKTLRIARMIVLASFALNSAAWAAGSNAPCSNASLSGTYGSLGEGTNPEGQP
Ga0181532_1011327513300014164BogMISKMFRIALTIVLASFALGSAAWATCSNASLNGTYGFLHGGTDSGIPVIGLSQATW*
Ga0181531_1082021013300014169BogMNIHERSGNANGRRATMISKVFCTASAIVLASFVLSSAAWAATCSNASLSGTYGFLHLGTDGSGTP
Ga0181526_1085513013300014200BogMVSKMCRIARMIVLATFAFSSAAWAATCSNESLSGTYGF
Ga0181526_1093260113300014200BogMISKTFRIARMIVLATFALSSAAWAATCSNASLSGTYGFL
Ga0182018_1004810343300014489PalsaMISKTFRIASMIVLASFALSSAAWAATCSNASLSGTYGSLGEGTN
Ga0182015_1003069033300014495PalsaMISKTFRIARMIVLASFALSSAASATATWTPCSNASLSGAYGFCTTATTTAPRSLA*
Ga0182024_1099772323300014501PermafrostMISKTFRIARMIVLASFALSSAAWAATCSNASLSGTYGSLGEGTN
Ga0181516_1051086323300014655BogMISKTFCIARMIVLASFAVSSAAWAATCSNASLSGTYGFLHGG
Ga0132256_10249308713300015372Arabidopsis RhizosphereMTSKTFRIARMIVLASCALSSAAGATCSNASLSGTYGFLHDGTD
Ga0182033_1057858223300016319SoilMISKTFRIARMIVLASFALSSAAWATCSNASLSGTY
Ga0187802_1008860723300017822Freshwater SedimentMISKTLRIARMIVLASLALSSAAWAAAAWTPCSNASLSGTYGFLH
Ga0187802_1044560313300017822Freshwater SedimentMISRMFRIARMIVLASFALSSAAWAATCSNASLSGTYGF
Ga0187814_1029320113300017932Freshwater SedimentMISKTLRIAPMIVLASFALSSAAWATCSNASVSGTYGFLGGGTDTSGNPTTY
Ga0187853_1007399933300017940PeatlandMISKTFRIARMIVLASFALSSAAWAATCSNTSLSDMSA
Ga0187853_1052583813300017940PeatlandMISKPLRIARMIVLASLALSSAAWAATCSNASLSGTYG
Ga0187847_1048940023300017948PeatlandMISKTSRVAQMIFLASFALSSAAWGTDTATDWATCSNASLSGTYGFLHDGTDSNG
Ga0187817_1020848533300017955Freshwater SedimentMISKTLRIALTIVLASFALSSAAWAATCSNASLSGTYGFLHDGTDSNGTS
Ga0187779_1135756813300017959Tropical PeatlandMISTTFRIARMIALASFAVSSAAWAAPCSNASLSGTYGFLHDGTDSN
Ga0187783_1059697313300017970Tropical PeatlandMILNTFRIASLIVLAAFAFSSASKATTCSNASLNGTYGFLHDGTDSTG
Ga0187783_1063297113300017970Tropical PeatlandMILKTFRIARMIVLASFALSSAAWAATCSNASLSGTYGLLHGGTAVTGLPTRSM
Ga0187783_1072394013300017970Tropical PeatlandMISKTFRIARMIVFTSFALSSAAWAATCSNASLSGTYGFLHGGTDSHGAPLRPP
Ga0187783_1098337313300017970Tropical PeatlandMISKTSCIARMIVLASFALSSAAWAAGSNAPCSNASLSGTYGFLHGGRDSHGAPAVAVTQ
Ga0187783_1136710413300017970Tropical PeatlandMIFKTFRIAQMIVLAIFALSSTAWGATCSNASLNGTYGFLHDGTD
Ga0187781_1071726023300017972Tropical PeatlandMISKTFRIARMIVLASFALSSAAWAATCSNASRSGAYGFLGE
Ga0187781_1094628713300017972Tropical PeatlandMIRNTFRIASLIILAAFAYCSAARATCSNASLSGTYGFLHDATDTT
Ga0187780_1014021123300017973Tropical PeatlandMISKTFRIARMIVLASFALSSAAWAATCSNASLSGTYGFLHDGTASNGAPATAAV
Ga0187782_1120930823300017975Tropical PeatlandMIPKTFRIASLIILAAFALGARARATCSNASLNGTYGFLH
Ga0187782_1140033223300017975Tropical PeatlandMNTGQNEESTMISKMFRIALTIILASFALSSAFGAATCSNASLSGTYGFLHDGTDS
Ga0187816_1031688023300017995Freshwater SedimentMISKTLCIAGTIVLASFALSSAVGATTCSNASLSGTYGFLHDGTDS
Ga0187767_1005843013300017999Tropical PeatlandMISKTFRIARMIVLASFALSSAAWAATCSNASLSGTYGFLHDGTASNGAP
Ga0187888_117674913300018008PeatlandMVSKMCRIASMIVLATFAFSSAAWAATCSNASLSGTYG
Ga0187884_10003534113300018009PeatlandMISKTSCIARMIVLASFALSSAAWAATCSNASLSGTYGFLHDGTDSNGA
Ga0187873_107769513300018013PeatlandMISKTFRIALTIVLASFALSSAAWAATCSNASLSGTYGFLHDGTDSNGAP
Ga0187873_120978823300018013PeatlandMISKTLRIARMIVLASFALNSAAWAAGSNAPCSNASLSGTYGSLGEGTN
Ga0187889_1044718013300018023PeatlandMISKPLRIARMIVLASLALSSAAWAATCSNASLSGTYGFLHSG
Ga0187869_1008956233300018030PeatlandMVSKMCRIASMIVLATFAFSSAAWAATCSNASLSGTYGLLKGGTDGARQPTTGVSQ
Ga0187867_1049215323300018033PeatlandMISKMFGIAPMIVLAGLALSSAAWATCSNASLSGT
Ga0187855_1029821723300018038PeatlandMISKTFRIARMIVLASFSLSSAAWAATCSDASLSGTYGFLHAGVDRRGAPAVAVTQLTFD
Ga0187871_1040603023300018042PeatlandMISKTFCIARMIVLASFAVSSAAWAATCSNASLSGTYGFLHGGVDSHGAP
Ga0187859_1020871613300018047PeatlandMISKMFRIALTIVLASFALSSAAWAATCSNASLSGTYGFLHDGTD
Ga0187859_1032307523300018047PeatlandMISKTFRIALTIVLAGFVLSSAAWAATCSNASLSGTYGFLHDSTDSNGAPATAA
Ga0187784_1018786413300018062Tropical PeatlandMISKTFRIARTIVLASFALSSAAWAATCSNASLSGTYGFLHD
Ga0187784_1030804023300018062Tropical PeatlandMISKAFRIARMIVLASFALSSAAGATCSNTSLSGTYGFLHDGTASNGAPA
Ga0187784_1094069323300018062Tropical PeatlandMVSKMFRITLTIVVASFALSSAAWAACSNSSLTGAYDFVGGGTDSDGTPNALL
Ga0210403_1053454813300020580SoilMISKTFRIARMIVLATFALSSAAWAATCSNASLSGTYGFLHDGTDST
Ga0210400_1055937213300021170SoilMISKTFRIARMIVLASFALSSAAWAATCSNASLSGTYGFLHDSTDSNGTPSGA
Ga0210400_1076073313300021170SoilMISKTIRIAVVLVLAAFALSTAARAANCSNASLSGTYGFLHDSTDSTGASDA
Ga0210393_1035341413300021401SoilMISKTMTSKTLRIARMIVLAAFALSSAAWAATCSN
Ga0210385_1006321423300021402SoilMISKTLRVALTIVLASFALSSAAWAATCSNASLSGTYGFLHDGTDSKGPLPPPP
Ga0210386_1065975623300021406SoilMISKTFRIARMIVLASFALSSAAWAATCSNASLSGTYGFLHAGIDSHGAPAAAVT
Ga0210383_1059317113300021407SoilMISKTLRIARMIVLATFALSSAAWAATCSNASLSG
Ga0210394_1175066213300021420SoilMISKTFRIASMIVLASFAFSSAAWAATCSNASLSGAYGFLH
Ga0210398_1003846013300021477SoilMISKMFRVALTIVLASFALSCAAWAATCSNASVSGIYGS
Ga0126371_1309897023300021560Tropical Forest SoilLISKTFRIAQMIVVVSFALSPAAWAATCSNASLSGTYGFLHDGTDSN
Ga0126371_1373818813300021560Tropical Forest SoilISEMLRIARMIVLAGLALISAAGATCSNASLSGTHGFQHDGTDFEARTSF
Ga0224541_102485823300022521SoilMISKMFRIALTILLATLAFSSAAGAATCSNASLSG
Ga0224563_100505713300022731SoilMISKTLRIARMFVLASFALSSAAWAATCSNASLSGTYGSLGEGTNPEG
Ga0228598_101678613300024227RhizosphereMISKTLRIARMFVLASFALSSAAWAATCSNASLSGTYGSLG
Ga0228598_110862013300024227RhizosphereMISKTLRIALTIVLASFAASSAAWAATCSNASLSGTSGFCT
Ga0208936_100082413300025404PeatlandMISKTLRIARMFVLASVSLSSAAWAATCSNASLSGTYGSLGEGTNQEGQP
Ga0208821_101877623300025432PeatlandMISKTFRIALTIVLASFALSSAAWAATCSNASLSGTYGFRHR
Ga0208188_112254413300025507PeatlandMISKTLRIALTIVLASFALSSAAWAATCSNASLSGTYGFL
Ga0208848_111673413300025509Arctic Peat SoilMTSRTFRIARLIVLASFALSSVAWAAPCSIASLSGTYGFLHDGTDSNGA
Ga0207685_1060891513300025905Corn, Switchgrass And Miscanthus RhizosphereMSSKTFRIARMIVLASFALSSAAGATCSNASLSGTYGFLHDGTDSNGTPSSAAV
Ga0207664_1104467123300025929Agricultural SoilMVSKTFRIARMMVLASFALSSAAWAATCSNASLSGT
Ga0207761_102768213300027516Tropical Forest SoilMISQTFRIARMIVLASFALSSAAWAATCSKASLSGTYGLLHGGTDAAGQPTIGVSQL
Ga0209115_105368813300027567Forest SoilMISKRFRIARMIILASFVVSSAAWAAPCSRASLSGPYGFLHDGTDSNGA
Ga0209221_107646113300027609Forest SoilMISKIFGIAGMIFLASFAVRSAAGATCSNASLSGTYGFVHGTTDNNGSPNSAA
Ga0208044_121026923300027625Peatlands SoilMISKTLRIALTIVLASFALSSAAWAATCSNASLSGT
Ga0209333_100631443300027676Forest SoilMISKTLRIALTMVLASFALSSAAWAATCSNASLSGTYGFLHGGTDSLGTCQRVEPGHV
Ga0209248_1023968923300027729Bog Forest SoilMISKTFRIAQTIVLASFAFSSAAWAATCSNASLSGAYGFLHDETDSNGAPF
Ga0209038_1012718613300027737Bog Forest SoilMISKVFCAASVIVLASFALSSAAWAAPCSNASLSGTYGWLHGG
Ga0209772_1012985413300027768Bog Forest SoilMISKVFCAASVIVLASFALSSAAWAAPCSNASLSGTYG
Ga0209772_1029817513300027768Bog Forest SoilMKSTMISKTFRIAGMIVLGSFVLSSGAGATCSNASLSGTYGFLHSGTAGDGTPTTTGCLF
Ga0209448_1011542123300027783Bog Forest SoilMISKMSRIALTIVLASFALSSAARATCSNASLSGTYGFL
Ga0209040_1036781813300027824Bog Forest SoilMISKTFRIARMIVLASFAVSSAAGATCSNASLSGTYGFLHDGTDSNGTPFN
Ga0209274_1013932923300027853SoilMISKTLRIARMIVLATFALSSAAWAATCSNASLSGTYGFLHDGADSTGAPASAAVTQLC
Ga0209693_1048280323300027855SoilMISKIFGIAGMIFLASFAVRSAAGTTCSNASLSGTYGFVHGTTDNNGSPNSA
Ga0209465_1008596133300027874Tropical Forest SoilLISKTFRIAQMIVVVSFALSPAAWAATCSNASLSGTYGF
Ga0209275_1038134123300027884SoilMISKTLRIARMIVLATFALSSAAWAATCSNASLSGTYG
Ga0209168_1011211623300027986Surface SoilMISKMFRIASLIFLATIVLASFALSSAAWADTCSNASLRGAYGF
Ga0302219_1001015113300028747PalsaMSSKIFRIAAVIVLAGSALSSAAGAATCSNASLSGTYGFLHGTTDSN
Ga0302219_1015508923300028747PalsaMISKTFRIAQMIVLASFALSSAAWATDSATDGATCSNASLSGTYGFLHDGTDSNGTPTS
Ga0302303_1007033233300028776PalsaMISKMFRIALTILLATLAFSSAAGAATCSNASLSGTYGWLHGGTASDGTPVI
Ga0302303_1026344113300028776PalsaMISKVLRIALTIGLASFALSSAAWAATCSNASLSGTYGF
Ga0302278_1014235533300028866BogMISKTFRIARMIVLASFALSSAAWAATCSNASLSGTYGSLGEGTNPEGQP
Ga0302141_122972423300029919BogMVSKMCRIASMIVLATFVFSSAAWAATCSNASLNG
Ga0311352_1004567753300029944PalsaMVSKMCRIASVIVLASFALSSAAWAATCSNASLSGTYGFLHD
Ga0311338_1096695523300030007PalsaMISKTFRIARMIVLASFALSSAAWAATCSNASLSGTYGSLGEGTNPE
Ga0302182_1002176813300030054PalsaMISKTFRIALTIVLASFALCSAAWAATCSNASLSGTYGFLHDGTDSNGAP
Ga0302176_1011751813300030057PalsaMISKTFRIAQMIVLASFALSSAAWATDSATDSATDWATDWATDWATCSNASLSGTYGFLH
Ga0302176_1036612713300030057PalsaMISKTFRIARMIVLVTFALGSTAWAATCSNASLSGTYGFLHLGTD
Ga0302179_1002894613300030058PalsaMISKTFRIALTIVLASFALSSAAWAATCSNASLSGTYGFLHD
Ga0311353_1018462513300030399PalsaMISKTFRIARMIVLVTFALGSTAWAATCSNASLSGTYGFLHLGTDSNGTPATAAVTQ
Ga0302183_1011318413300030509PalsaMISKMFRIALTILLATLAFSSAAGAATCSNASLSGTYGWLHGGTASDGTPVIGV
Ga0302309_1019102423300030687PalsaMISKTFRIAQMIVLASFALSSAAWATDTATDSAIDWADCSNASLSGTYGFLHDGTDSNGT
Ga0170834_10993555423300031057Forest SoilMIFKTLRIARMIVLASFTLSSAAWAATCSNASLSGTYGFLHSGTDSNGT
Ga0170824_10329358813300031231Forest SoilMTSKTFRIVGMIILASVALNSAARATCSDASLSGTYGFLHDGTDSNGAP
Ga0170824_10677777913300031231Forest SoilMIFKTLRIARMIVLASFTLSSAAWAATCSNASLSGTYG
Ga0302325_1208955613300031234PalsaMISKTFRIARMIVLASFALNSAAWAATCSNASLSGTYGFLHGG
Ga0302320_1075763623300031524BogMIFKTLRIARMIVLASVALSSAAWAATCSDASLSGTYGFLHSGIDSHGAPAVAVTQ
Ga0307476_1000743663300031715Hardwood Forest SoilMISKTLRIARMIVLATLALSSAAWAATCSNASLSGTYGFLHDGTDSTG
Ga0306923_1186488713300031910SoilMISKTFRIARMIVLASFALSSAAWATCSNASLSGT
Ga0306921_1107913913300031912SoilMISKTFRIARMIVLASFALSSAAWATCSNASLSGTYGFLHDGTDSNGTPAT
Ga0335081_1017369533300032892SoilMISKTLRIARMIVLASFALSSAAWAAAAWTPCSNASLSGTY
Ga0335077_1194946513300033158SoilMISRTFRAALTIVLASFAVSSAAGATFCSNTSLSGN
Ga0326728_1047489713300033402Peat SoilMISKTLRIARMFVLASFALSSAAWAATCSNASLSGT
Ga0370515_0086327_3_1223300034163Untreated Peat SoilMISKVFCTASVIVLASLALSSAAWAAPCSNASLNGTYGFL


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