Metagenome / Metatranscriptome Family F050704

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050704
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	87 residues
Representative Sequence	LLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWMALVIGGVLFTALLMRG
Number of Associated Samples	102
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.42 %
% of genes near scaffold ends (potentially truncated)	90.34 %
% of genes from short scaffolds (< 2000 bps)	96.55 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.793 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.586 % of family members)
Environment Ontology (ENVO)	Unclassified (31.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.931 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.07% β-sheet: 0.00% Coil/Unstructured: 47.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF07690	MFS_1	11.03
PF03006	HlyIII	4.14
PF06202	GDE_C	2.07
PF00166	Cpn10	1.38
PF00296	Bac_luciferase	0.69
PF03928	HbpS-like	0.69
PF01527	HTH_Tnp_1	0.69
PF03681	Obsolete Pfam Family	0.69
PF12833	HTH_18	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	4.14
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	2.07
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	1.38
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.79 %
Unclassified	root	N/A	46.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.79 %
Unclassified	root	N/A	46.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.79 %
Unclassified	root	N/A	46.21 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.41 %
Unclassified	root	N/A	46.21 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.34 %
Unclassified	root	N/A	46.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.21 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	44.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.21 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.14 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.69 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.21 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.14 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.21 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.14 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.69 %
Magnetospirillum marisnigri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101434414	Not Available	616	Open in IMG/M
3300001867\|JGI12627J18819_10062037	Not Available	1556	Open in IMG/M
3300001867\|JGI12627J18819_10237254	Not Available	734	Open in IMG/M
3300002245\|JGIcombinedJ26739_101569644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300002675\|Ga0005473J37261_107301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300002675\|Ga0005473J37261_107795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300002675\|Ga0005473J37261_110517	Not Available	520	Open in IMG/M
3300002675\|Ga0005473J37261_111103	Not Available	574	Open in IMG/M
3300002681\|Ga0005471J37259_105317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300002681\|Ga0005471J37259_105449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300004080\|Ga0062385_10345738	Not Available	870	Open in IMG/M
3300004081\|Ga0063454_101383769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300004091\|Ga0062387_100562045	Not Available	810	Open in IMG/M
3300004100\|Ga0058904_1003060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300004103\|Ga0058903_1455110	Not Available	517	Open in IMG/M
3300004152\|Ga0062386_100807137	Not Available	773	Open in IMG/M
3300004631\|Ga0058899_10140836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300005163\|Ga0066823_10122168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300005179\|Ga0066684_11084703	Not Available	513	Open in IMG/M
3300005187\|Ga0066675_10291759	Not Available	1178	Open in IMG/M
3300005434\|Ga0070709_10156448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1580	Open in IMG/M
3300005434\|Ga0070709_11246692	Not Available	599	Open in IMG/M
3300005435\|Ga0070714_100869547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300005435\|Ga0070714_101878189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300005436\|Ga0070713_100629632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021	Open in IMG/M
3300005437\|Ga0070710_11043884	Not Available	597	Open in IMG/M
3300005439\|Ga0070711_100125506	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300005439\|Ga0070711_100220875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1473	Open in IMG/M
3300005439\|Ga0070711_100785655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	806	Open in IMG/M
3300005439\|Ga0070711_101545572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300005561\|Ga0066699_10083866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2062	Open in IMG/M
3300006046\|Ga0066652_101173785	Not Available	727	Open in IMG/M
3300006163\|Ga0070715_10671092	Not Available	616	Open in IMG/M
3300006173\|Ga0070716_101246001	Not Available	599	Open in IMG/M
3300006175\|Ga0070712_100740580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	840	Open in IMG/M
3300006175\|Ga0070712_100978180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300006800\|Ga0066660_10475385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1048	Open in IMG/M
3300006806\|Ga0079220_10472390	Not Available	847	Open in IMG/M
3300006914\|Ga0075436_100500951	Not Available	888	Open in IMG/M
3300009137\|Ga0066709_103129716	Not Available	604	Open in IMG/M
3300009143\|Ga0099792_10048086	All Organisms → cellular organisms → Bacteria → Proteobacteria	2067	Open in IMG/M
3300009143\|Ga0099792_11040583	Not Available	549	Open in IMG/M
3300009148\|Ga0105243_12028934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300011120\|Ga0150983_12223476	Not Available	649	Open in IMG/M
3300011120\|Ga0150983_12345921	All Organisms → cellular organisms → Bacteria → Proteobacteria	1077	Open in IMG/M
3300011120\|Ga0150983_12892914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300011120\|Ga0150983_12894182	Not Available	682	Open in IMG/M
3300011120\|Ga0150983_14401099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300011120\|Ga0150983_16238614	Not Available	656	Open in IMG/M
3300011271\|Ga0137393_10686490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	877	Open in IMG/M
3300012096\|Ga0137389_10486052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1058	Open in IMG/M
3300012202\|Ga0137363_11380167	Not Available	594	Open in IMG/M
3300012203\|Ga0137399_11319047	Not Available	606	Open in IMG/M
3300012469\|Ga0150984_117422377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1510	Open in IMG/M
3300012683\|Ga0137398_10598267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300012683\|Ga0137398_10668977	Not Available	720	Open in IMG/M
3300012923\|Ga0137359_10310994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300012924\|Ga0137413_10228898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1265	Open in IMG/M
3300012944\|Ga0137410_10502243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	991	Open in IMG/M
3300012944\|Ga0137410_11871217	Not Available	531	Open in IMG/M
3300020579\|Ga0210407_10814472	Not Available	719	Open in IMG/M
3300020579\|Ga0210407_11117838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300020579\|Ga0210407_11425191	Not Available	513	Open in IMG/M
3300020580\|Ga0210403_10770567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766	Open in IMG/M
3300020580\|Ga0210403_11467406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300020581\|Ga0210399_10820482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300020581\|Ga0210399_11345381	Not Available	560	Open in IMG/M
3300020581\|Ga0210399_11546756	Not Available	513	Open in IMG/M
3300020583\|Ga0210401_10435884	Not Available	1173	Open in IMG/M
3300020583\|Ga0210401_10607283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	956	Open in IMG/M
3300021088\|Ga0210404_10294459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300021170\|Ga0210400_10282783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1360	Open in IMG/M
3300021171\|Ga0210405_10585647	Not Available	869	Open in IMG/M
3300021171\|Ga0210405_10975918	Not Available	640	Open in IMG/M
3300021178\|Ga0210408_10187117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1645	Open in IMG/M
3300021178\|Ga0210408_11349311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300021180\|Ga0210396_11075102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300021180\|Ga0210396_11408006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300021180\|Ga0210396_11638992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300021181\|Ga0210388_11622727	Not Available	537	Open in IMG/M
3300021401\|Ga0210393_11134950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300021406\|Ga0210386_10516004	Not Available	1033	Open in IMG/M
3300021432\|Ga0210384_11780343	Not Available	521	Open in IMG/M
3300021478\|Ga0210402_10998816	Not Available	764	Open in IMG/M
3300021478\|Ga0210402_11930900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300021559\|Ga0210409_11639776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300022508\|Ga0222728_1112529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300022531\|Ga0242660_1228528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300022533\|Ga0242662_10181732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300022708\|Ga0242670_1067276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300022726\|Ga0242654_10222312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300025898\|Ga0207692_10432318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300025906\|Ga0207699_10279038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1160	Open in IMG/M
3300025906\|Ga0207699_10553577	Not Available	834	Open in IMG/M
3300025915\|Ga0207693_10378268	Not Available	1107	Open in IMG/M
3300025915\|Ga0207693_11150857	Not Available	587	Open in IMG/M
3300025916\|Ga0207663_11279236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300025922\|Ga0207646_11420831	Not Available	603	Open in IMG/M
3300025928\|Ga0207700_10723379	Not Available	889	Open in IMG/M
3300025928\|Ga0207700_11079680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	718	Open in IMG/M
3300025929\|Ga0207664_10618332	Not Available	973	Open in IMG/M
3300025939\|Ga0207665_10577564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	876	Open in IMG/M
3300026308\|Ga0209265_1156951	Not Available	588	Open in IMG/M
3300026317\|Ga0209154_1284092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300026322\|Ga0209687_1264945	Not Available	536	Open in IMG/M
3300026324\|Ga0209470_1357733	Not Available	523	Open in IMG/M
3300026361\|Ga0257176_1067955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300026490\|Ga0257153_1046749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300026496\|Ga0257157_1095064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300026507\|Ga0257165_1102247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300026530\|Ga0209807_1051704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1894	Open in IMG/M
3300026555\|Ga0179593_1028144	All Organisms → cellular organisms → Bacteria	2965	Open in IMG/M
3300026557\|Ga0179587_10383113	Not Available	915	Open in IMG/M
3300027061\|Ga0209729_1001891	All Organisms → cellular organisms → Bacteria → Proteobacteria	1871	Open in IMG/M
3300027583\|Ga0209527_1001037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5817	Open in IMG/M
3300027674\|Ga0209118_1151562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300027765\|Ga0209073_10286112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300027884\|Ga0209275_10552501	Not Available	659	Open in IMG/M
3300027903\|Ga0209488_10628654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	776	Open in IMG/M
3300027908\|Ga0209006_11308346	Not Available	560	Open in IMG/M
3300028047\|Ga0209526_10846921	Not Available	561	Open in IMG/M
3300029636\|Ga0222749_10233414	Not Available	931	Open in IMG/M
3300029636\|Ga0222749_10416428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300029636\|Ga0222749_10528095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300029636\|Ga0222749_10562629	Not Available	621	Open in IMG/M
3300029636\|Ga0222749_10808746	Not Available	513	Open in IMG/M
3300031057\|Ga0170834_113648515	Not Available	628	Open in IMG/M
3300031231\|Ga0170824_102707854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300031474\|Ga0170818_109561801	Not Available	860	Open in IMG/M
3300031474\|Ga0170818_112895345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1595	Open in IMG/M
3300031753\|Ga0307477_10537267	Not Available	792	Open in IMG/M
3300031754\|Ga0307475_10803059	Not Available	747	Open in IMG/M
3300031754\|Ga0307475_11372389	Not Available	545	Open in IMG/M
3300031820\|Ga0307473_10659965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300031823\|Ga0307478_10730836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300031823\|Ga0307478_11229500	Not Available	624	Open in IMG/M
3300031962\|Ga0307479_10710318	Not Available	984	Open in IMG/M
3300031962\|Ga0307479_11408447	Not Available	656	Open in IMG/M
3300032174\|Ga0307470_10923340	Not Available	688	Open in IMG/M
3300032180\|Ga0307471_101011767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300032180\|Ga0307471_101761430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300032205\|Ga0307472_101486242	Not Available	661	Open in IMG/M
3300034680\|Ga0370541_063484	Not Available	503	Open in IMG/M
3300034680\|Ga0370541_064070	Not Available	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.93%
Host-Associated	Host-Associated	2.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.86%
Aquatic	Environmental → Aquatic	2.07%
Plants	Host-Associated → Plants	2.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.86%
Freshwater	Environmental → Aquatic → Freshwater	2.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.07%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.38%
Loam	Environmental → Terrestrial → Soil → Loam	34.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.28%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002675	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF122 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002681	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1014344142	3300000364	Soil	YRRISTLIRLSARTTGTVLTQIVETNPLELAGALARDAQPDETMPQPAHSEAVVPRKRVDGRMGSIREGWQLWVALNANNLIWTALVIGGVIFTSCLMRG*
JGI12627J18819_100620371	3300001867	Forest Soil	PAYRRIATLLRLERTAGTVLTRIVETNPVELAGALARDARLNETAPQEAYSKAVVSRKRARGGMGSFREGWKHWVTLNATDLTWTALVIGGVLFTSCLMRGW*
JGI12627J18819_102372541	3300001867	Forest Soil	IVETNPVELAAALARDAQLDETAAQRALSKVVVSRARGRMESFHQGWNHWVTLNTTDLIWTVLVIGGVLFTSCLMRSW*
JGIcombinedJ26739_1015696442	3300002245	Forest Soil	IVETNPVELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWIALVIGGVLFTTLLMRG*
Ga0005473J37261_1073011	3300002675	Forest Soil	QIVETNPAELAAALARDAQPVEALLPQRTHNAAVVSRKRAGGRMDSFREGWRDWVSLNATDLTWMALVIGGVLFTTLLMRG*
Ga0005473J37261_1077951	3300002675	Forest Soil	LTQIVERTRGGPSARRAARRNGAAQAYSKAVVSRKRARGRIECFREGWKHWVTLNATDLIWAALVIGGVLFTSCLMRGW*
Ga0005473J37261_1105172	3300002675	Forest Soil	VELAGALARDAQLDETVPQPAHSEGVVPWRRDGGRILSFREGWKHWASLNATDLIWTALVIGGVLFTSCLMRG*
Ga0005473J37261_1111031	3300002675	Forest Soil	TGTVQTQIVETNPVELAGALARDAQPDETALQPAHSEGVVSRKRAGGRVVSFREGWKHWVRLNATDLIWTALVIGGVLFTDCLMRG*
Ga0005471J37259_1053171	3300002681	Forest Soil	VETNPVELAGALARDAQPDETVPQRAHSKAVVSRKRARGRTDSFREGWKDWVTLNATDLTWMALVIGGVLFTTLLMRG*
Ga0005471J37259_1054491	3300002681	Forest Soil	ELAAALARDAQPVEALLPQRTHNAAVVSRKRAGGRMDSFREGWRDWVTLNATDLTWMALVIGGVLFTTLLMRG*
Ga0062385_103457381	3300004080	Bog Forest Soil	MGTVLTQIVETNPVELAAALARDAQPDETAPQRAHSEAVVSRKKARGRMDSFREGWKEWVTLNATDLTWMALVIGGVLFTTLL
Ga0063454_1013837691	3300004081	Soil	LARDARPDETVPQRAHSEAVVSRKRARGRMDSFREGSKDWVTFNATDLTRIALVIGGVLFTTLLMEGEPMSDDRRFQ*
Ga0062387_1005620451	3300004091	Bog Forest Soil	MGTVLTQIVETNPVELAAALARDAQPDETAPQRAHSEAVVSRKKARGRMDSFREGWKEWVTLNATDLTWMALVIGGVLFTTLLMRG*
Ga0058904_10030602	3300004100	Forest Soil	TQIVETNPVELAGALARDAQPDETLLPRRAHSAAVVSRKRARGRTDSFREGWKDWVTLNATDLTWMALVIGGVLFTTLLMRG*
Ga0058903_14551102	3300004103	Forest Soil	LGGALARDAQLDETVPQPAHSEGVVPRRRGGGRILSFREGWRHWVSLNATDLIWTALVIGGVLFTSCLMRG*
Ga0062386_1008071371	3300004152	Bog Forest Soil	GFGHRLPAYRRIATLMRLARTTGTVLTQIVETNPVELAGAPARDAQLDETVPPAHSEDVVPRRRGGGRILSFREGWKHWVSLNATDLIWTALVIGGVLFTSCLMRG*
Ga0058899_101408361	3300004631	Forest Soil	VETNPAELAAALARDAQPDETVPQRAHSEPVVSRKRARGRMDAFREGWKDWITFNATDLTWMALVIGGVLFTTLLMRG*
Ga0066823_101221681	3300005163	Soil	ASSIPAYRRIATLLRLERTTGTVLTQIVETNPVELAGALARDAQPGETAPQQAYSKAVVSRKRARGRIECFREGWKHWVTLNATDLIWTALVIGGVLFTSCLMRGW*
Ga0066672_109496721	3300005167	Soil	TVPARAHSDGIVPRKRAGGRMDSFRVGWRDWMALNATDLTWMALIIGGVLFTSLLMRG*
Ga0066684_110847031	3300005179	Soil	PVELAGALARDAQLDETVPQPAHSEGVVPRKKGGGRMLSFREGWKHWVSLNATDLIWTALVIGGVLFTSCLMRG*
Ga0066675_102917593	3300005187	Soil	LMRLARTTGTVLTQIVEINPVELAGALARDAQLDETVPQPAHSEGVVPRRRGGGRMLSFREGWKRWVSLNATDLIWTALVIGGVLFTSCLMRG*
Ga0070709_101564482	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PSSLPAYRRIATLLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWVALVIGGVLFTALLMRG*
Ga0070709_112466921	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ATLLRLERTTGTVQTQIVETNPVELAGALARDAQPDETAAQPAHSEGVVSRKRTRGRMESFREGWKDWVRLNATDLIWTALVIGGVLFTSYLMRG*
Ga0070714_1008695472	3300005435	Agricultural Soil	LAGALARDAQPAETAPQRACSKAVVSPKGARGRMEFFRQGWKHWVTLNATDLTWTALVIGGVLFTSCLMRGW*
Ga0070714_1018781891	3300005435	Agricultural Soil	LRLERNTGTVLTQIVETDPVELAGALARDAQPDETLLPQRAHSAAVVSRERAGSRTDSFREGWKDWVTRNATDLTWMALVIGGVLFTTLLMRG*
Ga0070713_1006296321	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNLTDLTWMALVIGGVLFTTLLMRG*
Ga0070710_110438841	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWMALVIGGVLFTALLMRG*
Ga0070711_1001255061	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ELAGALARDAQLDETVPQPAHSEGVVPQRRGGGRILSFREGWEHWVSLNATDLIWTGLVIGGVLFTSCLMRV*
Ga0070711_1002208751	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTGATGTVRTQIVETNPVELAGALARDAQPAETAPQRACSKAVVSPKGARGRMEFFRQGWKHWVTLNATDLTWTALVIGGVLFTSCLMRGW*
Ga0070711_1007856551	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLEASSLPAYRRIATLLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWMALVIGGVLFTALLMRG*
Ga0070711_1015455721	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QIVETNPVELAGALARDAQPDETVPQRAHSKAVVSRKRARGRTDSFREGWKDWVTLNATDLTWMALVIGGVVFTTLLMRA*
Ga0066699_100838661	3300005561	Soil	MRLPARSIGTMLTQIVETDPVELARALARDAQMNETMPQPAHSEPVVPRKRAGGLMGSFREGWKHWIALNATDLVWTALVIGGVIFTSCLMRG*
Ga0066652_1011737851	3300006046	Soil	NPVELAGALARDAKLDETVPQPAHSEGVVPRRRGGGRTLSFREGWKRWVSLNATDLIWTALVIGGVLFTSCLMRG*
Ga0070715_106710922	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ARDAQPDETMPQPAHSEPVAPRKRAGGRMGSFREGWKHWVALNATDLIWTALVIGAVLFTSCLMGG*
Ga0070716_1012460011	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TGTVLTQIVETNPVELAGALARDAQPDETVPQQVHGEGVGSRKRARGRMESFREGWKHWVSLNATDLIWTALVIGGVLFTSLLMRG*
Ga0070712_1007405801	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NTGTVLTQIVETDPVELAGALARDAQPDQTVPQRAHSKAVVSRKRARGRTDSFREGWKDWVTLNATDLTWMALVIGGVVFTTLLMRA*
Ga0070712_1009781802	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SLPAYRRIATLLRLERTTGTVRTQIVETNPVELAGALARDAQPAETAPQRACSKAVVSPKGARGRMEFFRQGWKHWVTLNATDLTWTALVIGGVLFTSCLMRGW*
Ga0066660_104753852	3300006800	Soil	MRLARTTGTVLTQIVETNPVELAGALARDAKLDETVPQPAHSEGVVPRRRGGGRMLSFREGWKRWVSLNATDLIWTALVIDGVLFTSCLMRG*
Ga0079220_104723901	3300006806	Agricultural Soil	RLERTTGAVLTQIVETNPVELAAALARDAQPDETMPQRAYRKSVVPRKREGGRKGSFREGWKHWVTLNATDLTWTALVIGGVLLTSCLMRGW*
Ga0075436_1005009511	3300006914	Populus Rhizosphere	LLRLERTAGTVLTRIVETNPVELAGALARDARLDETAPQEAYSKAVVSRKRARGGMGSFREGWKHWVTLNATDLTWTALVIGGILFTSCLMRGW*
Ga0066709_1031297161	3300009137	Grasslands Soil	PAYRRIATLMRLARTTGTVLTQIVEINPVELAGALARDAELDETVPQPAHSEGVVPRRRGGGRTLSFREGWKRWVSLNATDLIWTALVIGGVLFTSCLMRG*
Ga0099792_100480861	3300009143	Vadose Zone Soil	TLLRLERNTGAVLTQIVETNPAELAGALARDAQPDETLLPQRAHNAAVVSRKRAGGRMDSFREGWRDWVTLNATDLTWMALVIGGVLFTTLLMRG*
Ga0099792_110405832	3300009143	Vadose Zone Soil	LTQIVETNPVELAGALARDAQLDGTVPQWAHSEGVVPRRRGGGRMLSFHEGWKRWVSLNATDLIWTALVIGGVLFTSCLMRG*
Ga0105243_120289341	3300009148	Miscanthus Rhizosphere	TGTVLTQIVETNPAELAGALARDAQPDETAPQQAYSKAVVSRKRARGRIESFREGWKHWVTLNATDLIWTALVIGGVLFTSCLMRGW*
Ga0150983_122234761	3300011120	Forest Soil	LAGALAPPDETAPQRAYSKAIVSRNSAGGRMHWVTLNATDLIWTALVIGGVLFTSCLMRGW*
Ga0150983_123459211	3300011120	Forest Soil	LRLERTTGTVQTQIVETNPVELAGALARDAQPDETALQPAHSEGVVSRKRAGGRVVSFREGWKHWVRLNATDLIWTALVIGGVLFTDCLMRG*
Ga0150983_128929143	3300011120	Forest Soil	YRRIATLLRLERTKGMVLTQIVETTPMELAGALARDAQPGESAPQPAYSKAVVSRKRARSRIESFRQGWKDWVTLNATDLTWTALVIGGVLFTSCLMRGW*
Ga0150983_128941822	3300011120	Forest Soil	YRRIATLLRLERTKGMVLTQIVETTPMELAGALARDAQPGETAPQPAYSKAVVSRKRARGRIESFRQGWKDWVTLNATDLTWTALVIGGVLFTSCLMRGW*
Ga0150983_144010991	3300011120	Forest Soil	TLLRLERNTGAVLTQIVETNPAELAAALARDAQPDETVPQRAHSEPVVSRKRARGRMDAFREGWKDWITFNATDLTWMALVIGGVLFTTLLMRG*
Ga0150983_162386141	3300011120	Forest Soil	ERTTGTVQTEIVETNPVELAGALARDAQPDETAAQPAHSEGVVSRKRTRGRMESFGEGWKDWVRLNATDLIWTALVIGGVLFTSYLMRG*
Ga0137393_106864901	3300011271	Vadose Zone Soil	RDAQPDETVLQPGHSEGVVSRKRARGRMESFREGWKHWVTFNATDLIWTTLVIGGVVFTNCLMRG*
Ga0137389_104860522	3300012096	Vadose Zone Soil	QASSILAYRRIATLLRLERTMGTVQTLIVETNPVELAVALARDAQPDETVLQPGPSEGVVSRKRARGRMESFREGWKDWVRLNATDLIWTALVIGGVLFTSYLMRG*
Ga0137363_113801672	3300012202	Vadose Zone Soil	RIATLIRLARTTGTVQTQIVQTNPVELAGALARDARPDQTVPQRAHNERVVFQKRAGGSMESFSEGWKHWVTLNATDLIWTALVIGGVLFTTLLMKG*
Ga0137399_113190472	3300012203	Vadose Zone Soil	LARDAQLDETMPQPAHSEAIMPRKRAGGRMGSFRAGWKHWVTLNANDLVWTALVIGGVLFTSLLMRR*
Ga0150984_1174223771	3300012469	Avena Fatua Rhizosphere	ELLQPSSLPAYRRIATLLRLERNTGTVLTQIVETNPVELAGALAGDAQPGETVPQRARSEAFVSRKRARGRINSFSEGWKYWVTLNATDLTWTALVIGGVLCTTLLMRG*
Ga0137398_105982672	3300012683	Vadose Zone Soil	TQIVETNPAELAGALARDAQPAETVAQRAHSEAVVSPKRARGRMDSFREGWKDWVTLNATDLTWMALVIGGVLFTTLLMRG*
Ga0137398_106689771	3300012683	Vadose Zone Soil	RIATLLRLERTTGTVQTQIVETNPVELAGALARDAQPDETVLQPAHSEGVVSRKRAGGRVVSFREGWKHWVRLNATDLIWTALVIGGVLFTDCLMRG*
Ga0137359_103109941	3300012923	Vadose Zone Soil	VELAGALARDAQPDETVLQPGHSEGDVSRKRAPGRMESFREGWKHWVTFNATDLIWTTLVIGGVVFTNCLMRG*
Ga0137413_102288983	3300012924	Vadose Zone Soil	AGALARDAQPDETVLQPGHSEGVVSRKRARGRMESFREGWKHWVTFNATDLIWTTLVIGGVVFTNCLMRG*
Ga0137410_105022431	3300012944	Vadose Zone Soil	VQTQIVETNPVELAGALARDAQPDETALQPAHSAGVVSRKRAGGRVVSFREGWKHWVRLNATDLIWTALVIGGVLFTVCLMRW*
Ga0137410_118712172	3300012944	Vadose Zone Soil	MRLPVRSMGTVLTQIVETNPVELTRALARDAQLDETMPQPAHSEAIMPRKRAGGRMGSFRAGWKHWVTLNANDLVWTALVIGGVLFTSLLMRR*
Ga0210407_108144722	3300020579	Soil	TGTVLLTQIVETNPVELAGALARDAQLDETVPQPAHSEGVVPRRRGGGRILSFREGWKHWVSLNATDLIWTGLVIGGVLFTSCLMRV
Ga0210407_111178381	3300020579	Soil	PSSLPAYRRIATLLRLERNTGAVLTQIVETNPAELAGALARDAQPVETVAQRAHSEAVVSPKRARGRMKSFSEGWKDWVTFNATDLTWIALVIGGVLFTTLLMRG
Ga0210407_114251911	3300020579	Soil	RSMGTVLTQIVETNPVELARALARDAQLDETIPQPAHSEAIMPRKRAGGRMRSFREGWKHWVTLNANDLVWTALVIGGVLFTSLLMRR
Ga0210403_107705672	3300020580	Soil	LLRLERNTGAVLTQIVETNPVELAAALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTFNATDLTWIALVIGGVLFTTLLMRG
Ga0210403_114674061	3300020580	Soil	TTGTVLTQIVETNPVELAGALARDAQPDETAPQQAYSKAVVTRKRERGRIESFREGWKHWVTLNATDLIWTALVIGGVLFTSCLMRGW
Ga0210399_108204823	3300020581	Soil	ESSIPAYRRIATLLRLERTTGTVLTQIVETNPVELAGALARDAQPGETAPQQAYSKAVVSRKRARGRIECFREGWKHWVTLNATDLIWAALVIGGVLFTSCLMRGW
Ga0210399_113453811	3300020581	Soil	RLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRARSEAVVSRKRTRGRMKSFSEDWKYWVTLNATDLTWTALVIGGVLFTTLLMRG
Ga0210399_115467561	3300020581	Soil	ELLQGLSIPAYKRIATLLRLERTTGSIPTQIVETNPLELAGALAKDAQPTETMPQPAHSEGVVSRKRARGRMESFREGWRHWVCLNATDLTWIALVIGGVLFTTLLMRG
Ga0210401_104358841	3300020583	Soil	RDAQPDETMPQRAYRKAVVRRKWAGSRIGSFREGWKCWVALNATDLIWTTVVIGGVLFTSCLMSG
Ga0210401_106072833	3300020583	Soil	QESSIPAYRRIATLLRRERTTGTVLTQIVETNPVELAGALARDAQPGETAPQQAYSKAVVSRKRARGRIECFREGWKHWVTLNATDLIWAALVIGGVLFTSCLMRGW
Ga0210404_102944591	3300021088	Soil	LLRLERNTGAVLTQIVETNPAELAAALARDAQPVEALLPQRTHNAAVVSRKRAGGRMDSFREGWRDWVSLNATDLTWMALVIGGVLFTTLLMRG
Ga0210400_102827834	3300021170	Soil	ETNPVELAGALARDAQPGETAPQQAYSKAVVSRKRARGRIECFREGWKHWVTLNATDLIWAALVIGGVLFTSCLMRGW
Ga0210405_105856471	3300021171	Soil	GTVLLTQIVETNPVELAGALARDAQLDETVPQPAHSEGVVPWRRDGGRILSFREGWKHWASLNATDLIWTALVIGGVLFTSCLMRG
Ga0210405_109759181	3300021171	Soil	VELAAALARDAQPDETVPQRAPSEAVVSRKKARGRMDSFREGWKEWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0210408_101871171	3300021178	Soil	RIATLLRLEQTTGTVRTQIVETNPVELAGALARDAQPAETAPQRACSKAVVSPKGARGRMEFFRQGWKHWVTLNATDLTWTALVIGGVLFTSCLMRGW
Ga0210408_113493111	3300021178	Soil	QIVETNPVELAAALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTFNATDLTWIALVIGGVLFTTLLMRG
Ga0210396_110751021	3300021180	Soil	LERNTGTVLTQIVETNPAELAGALARDAQPVETVAQRAHSEAVVSPKRARGRMKSFSEGWKDWVTFNATDLTWIALVIGGVLFTTLLMRG
Ga0210396_114080062	3300021180	Soil	EELLQPSSLPAYRRIATLLRLERNTGAVLTQIVETNPAELAGALARDAQPDETVPQRAHSKAVVSRKRARGRIDSFREGWKDWVTFNATDLTWIALVIGGVLFTTLLMRG
Ga0210396_116389921	3300021180	Soil	YRRIATLLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVLQRADSEAVVSRKRAGGRMGSFREGWKDWVTFNAIDLTWIALVIGGVLFTTLLMRG
Ga0210388_116227272	3300021181	Soil	IATLLRLERTTGTVRTQIVETNPVELAGALARDAQPAETAPQRACSKAVVSPKGARGRMEFFRQGWKHWVTLNATDLTWTALVIGGVLFTSCLMRGW
Ga0210393_111349501	3300021401	Soil	LERNAGAVLTQIVETNPAELAAALARDAQPVEALLPQRTHNAAVVSRKRAGGRMDSFREGWRDWVSLNATDLTWMALVIGGVLFTTLLMRG
Ga0210386_105160042	3300021406	Soil	MGTVLTQIVETNPVELAAALARDAQPAETLLPQRAHSEAVVSRKKARGRMDSFREGWKEWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0210384_117803431	3300021432	Soil	LLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRARSEAVVSRKRTRGRMKSFSEDWKYWVTLNATDLTWTALVIGGVLFTTLLMRG
Ga0210402_109988161	3300021478	Soil	LAAVLARDSQPEETMLQPAHSEPVVHRKRAGGRMGSFREGWKHWVTLNANDLVWTALVIGGVLFTTLLMRG
Ga0210402_119309001	3300021478	Soil	TLLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRAHSKAVVSRKRARGRTDSFREGWKDWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0210409_116397762	3300021559	Soil	NTGTVLTQIVETNPVELAGALARDAQPDETLLPQRAHSAAVVSRKRAGGRMDSFREGWRDWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0222728_11125292	3300022508	Soil	ERTTGTVLTQIVETNPVELAGALARDAQPGETAPQQAYSKAVVSRKRARGRIECFREGWKHWVTLNATDLIWAALVIGGVLFTSCLMRGW
Ga0242660_12285282	3300022531	Soil	GARGGSSERRTADETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWMALVIGGVLFTALLMRG
Ga0242662_101817321	3300022533	Soil	LAAALARDAQPVEALLPQRTHNAAVVSRKRAGGRMDSFREGWRDWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0242670_10672762	3300022708	Soil	LTQIVETNPVELAGALARDAQPDETVPQRAHSKAVVSRKRARGRTDSFREGWKDWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0242654_102223122	3300022726	Soil	ELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWVALVIGGVLFTALLMRG
Ga0207692_104323182	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWVALVIGGVLFTALLMRG
Ga0207699_102790381	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	SSLQAVATLLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWVALVIGGVLFTALLMRG
Ga0207699_105535771	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	QPSSLPAYRRIATLLRLERTTGTVLTQIVETNPVELAAALARDAQPDETVPARAHSDGVVPRKRAGGRTDSFREGWKDWVTLNATDLTWMALVIGCVLFITLLMRG
Ga0207693_103782681	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SIPAYRRIATLLRLERTTGTVLTQIVETNPVELAGALARDAQPDETVPQQVHSEGVGSRKRARGRMESFREGWKHWVSLNATDLIWTALVIGGVLFTSLLMRG
Ga0207693_111508572	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	APRRGRPVAEERRLRSLPAYRRIATLLRLERNTGTVLTQIVETDPVELAGALARDAQPDETLLPQRAHSAAVVSRERAGSRTDSFREGWKDWVTRNATDLTWMALVIGGVLFTTLLMRG
Ga0207663_112792362	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QIVETNPVELAGALARDAQPDETVPQRAHSKAVVSRKRARGRTDSFREGWKDWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0207646_114208311	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TLLRLERTKGMVLTQIVETTPMELAGALARDAQPGETAPQPAYSKAVVSRKRARGRIESFRQGWKDWVTLNATDLTWTALVIGGVLFTSCLMRGW
Ga0207700_107233791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ERTTGRVLTQIVETNPVELAAALARDAQPDETVPARAHSDGVVPRKRAGGRTDSFREGWKDWVTLNATDLTWMALVIGCVLFISLLMRG
Ga0207700_110796801	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRAHSKAVVSRKRARGLTDSFREGWKDWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0207664_106183321	3300025929	Agricultural Soil	TNPVELAGILARDAQPDETMPQPAHSEPVAPRKRAGGRMGSFREGWKHWVALNATDLIWTALVIGGVLFTSCLMGGVTNVGR
Ga0207665_105775642	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LAGALARDAQPDETVPQQVHSEGVGSRKRARGRMESFREGWKHWVSLNATDLIWTALVIGGVLFTSLLMRG
Ga0209265_11569512	3300026308	Soil	QIVEINPVELAGALARDAQLDETVPQPAHSEGVVPRRRGGGRMLSFREGWKRWVSLNATDLIWTALVIGGVLFTSCLMRG
Ga0209154_12840921	3300026317	Soil	QPNETVPARAHSDGIVPRKRAGGRMDSFRVGWRDWMALNATDLTWMALIIGGVLFTSLLMRG
Ga0209687_12649451	3300026322	Soil	ETNPVELAAALARDAQPDETVPAWAHNDDIVPRKRAGGRMDSFRVGWRDWMALNATDLTWMALIIGGVLFTSLLMRG
Ga0209470_13577331	3300026324	Soil	RISTLIRLPARSIGTMLTQIVETNPVELARALARDAQPEQAVPQPAHSEAIMPRKRADRRMGSFREGWKHWVALNANDLVWTALVIGGVLFTSWLMRG
Ga0257176_10679552	3300026361	Soil	AQPDETVPQRAHSAAVVSRKRAGGRMDSVREGWRDWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0257153_10467492	3300026490	Soil	VELAGALARDAQPDETVLQPGHSEGVVSRKRARGRMESFREGWKHWVTFNATDLIWTTLVIGGVVFTNCLMRG
Ga0257157_10950642	3300026496	Soil	MGTVQTQIVETNPVELAGALARDAQPDETVLQPGHSEGVVSRKRARGRMESFREGWKHWVTFNTTDLIWTTLVIGGVVFTNCLMRG
Ga0257165_11022471	3300026507	Soil	AYRRIATLLRLERTMGTVQTQIVETNPVELAGALARDAQPDETVLQPGHSEGVVSRKRARGRMESFREGWKHWVTFNATDLIWTTLVIGGVVFTNCLMRG
Ga0209807_10517041	3300026530	Soil	IATLLRLERTTGRLMTQIVETNPVELAAALARDAQPDETVPAWAHNDGIVPRKRAGGRMDSFRVGWRDWMALNATDLTWMALIIGGVLFTSLLMRG
Ga0179593_10281443	3300026555	Vadose Zone Soil	LLRLERTTGTVQTEIVETNPVELAGALARDAQPDETAAQPAHSEGVVSRKRTRGRMESFGEGWKDWVRLNATDLIWTALVIGGVLFTSYLMRG
Ga0179587_103831131	3300026557	Vadose Zone Soil	QTSSFRAYRRISTLMRLPARSIGTMLTQIVETNPVELARALARDAQLNETMPQPAHSEPVVPRKRAGGRMGSFREGWKHWIALNATDLVWTALVIGGVIFTSCLMRG
Ga0209729_10018913	3300027061	Forest Soil	AIDAQLDETVPQRAHSEPVVSRKRARGRMDSFREGWKDWVTFNATDLTWMALVIGGVLFTTLLMRG
Ga0209527_10010377	3300027583	Forest Soil	MTGATGTVRTQIVETNPVELAGALARDAQPAETAPQRACSKAVVSPKGARGRMEFFRQGWKHWVTLNATDLTWTALVIGGVLFTSCL
Ga0209118_11515621	3300027674	Forest Soil	RDAQPDETVLQPGHSEGVVSRKRARGRMESFREGWKHWVTFNATDLIWTALVIGGVVFTNCLMRG
Ga0209073_102861122	3300027765	Agricultural Soil	NPVELAAALAIDAQPDETVPQRAHSEPVVSRKRARGRMDSFLEGWKDWVTFNATDLTWIALVIGGVLFTTLLMRG
Ga0209275_105525011	3300027884	Soil	IATLMRLARTTGTVLTQIVETNPVELAGALARDAQLDETVPQPAHSEGVVPRRRGGGRILSFREGWKHWVSLNATDLIWTGLVIGGVLFTSCLMRV
Ga0209488_106286541	3300027903	Vadose Zone Soil	LRLERTTGTAQTQIVETNPVELAGALARDAQPDETVLQPAHSEGVVSRKRAGGRVVSFREGWKHWVRLNATDLIWTALVIGGVLFTDCLMRG
Ga0209006_113083462	3300027908	Forest Soil	AGALARDAQPDETVPQRARSEAVVSRKRARGRMKSFSEGWKYWVTLNATDLIWTALVIGGVLFTSCLMRG
Ga0209526_108469211	3300028047	Forest Soil	LDPSSLPAYRRIATLLRLERTTGTVRTQIVETNPVELAGALARDAQPAETAPQRACSKAVVSPKGARGRMEFFRQGWKHWVTLNATDLTWTALVIGGVLFTSCLMRGW
Ga0222749_102334142	3300029636	Soil	MGTVLTQIVETNPVELAAALARDAQPDETLLPQRAHSEAVVSRKKARGRMDSFREGWKEWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0222749_104164281	3300029636	Soil	RRIATLLRLERTTGTVQTEIVETNPVELAGALARDAQPDETAAQPAHSEGVVSRKRTRGRVESFREGWKDWVRLNATDLILTALVIGGVLFTSYLMRG
Ga0222749_105280951	3300029636	Soil	IATLLRLERNTGTVLTQIVETNPVELAGALARDAQPDETLLPRRAHSAAVVSRKRARGRTDSFREGWKDWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0222749_105626292	3300029636	Soil	NTGTVLTQIVETNPVELAGALARDAQPDETVLPQRAHRAAVVSRKRAGGRMDSFREGWRDWVTLNATDLTWMALVIGGVLFTTLLMRG
Ga0222749_108087461	3300029636	Soil	EVNPVELAAVLARDSQPEETMLQPAHSEPVVHRKRAGGRMGSFREGWKHWVTLNANDLVWTALVIGGVLFTSLLMRG
Ga0170834_1136485151	3300031057	Forest Soil	GTVLTQIVETNPVELAGALARDGHPDETAPQQAYGKAVVSRTRARGRIESFREGWKHWVTLNTTYLIWTALVIGGVLFTSCLMRGW
Ga0170824_1027078541	3300031231	Forest Soil	QASSIPAYGRIATLLRLERTTGTVPTQIVETNPLELAGALARDAQPDETAPQQAYSKAVVSRKRARGRIESFREGWKHWVTLNANDLAWTALVIGGVLFTTWLMRG
Ga0170818_1095618011	3300031474	Forest Soil	RIATLLRLERTTGTAQTQILETNPVELAGALARDVQPDETVLQPAHSEGVVPRRRGGGRILSFREGWKHWVSLNATDLIWTALVIGGVLFTSCLMRG
Ga0170818_1128953453	3300031474	Forest Soil	PAYRRIATLLRVERTTGTVLTQIVETNPLELAGALARDAQPDETAPQQAYSKAVVSRKRARGRIESFREGWKHWVTLNANDLAWTALVIGGVLFTTWLMRG
Ga0307477_105372671	3300031753	Hardwood Forest Soil	TGAVLTQIVETNPVELASALARDAQPDETMPQRAYRKAVVRQKWAGSRIGSFREGWKCWVALNGTDLIWTTLVIGGVLFTSCLMSG
Ga0307475_108030591	3300031754	Hardwood Forest Soil	NPVELAGALARDAQLDETVPQPAHSEGVVPRRRGGGRILSFREGWKHWVSLNATDLIWTALVIGGVLFTSCLMRG
Ga0307475_113723891	3300031754	Hardwood Forest Soil	IPAYRRIATLLRLERTTGAVLTQIVETNPVELAGALARDAQPDETAPQQAYGKAVVSRKGARGQIESFREGWKHWVTLNATDLTWTALVIGGVLLTSCLMRGW
Ga0307473_106599651	3300031820	Hardwood Forest Soil	LPAYRRIATLLRLERNTGTVLTQIVETNPVELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWVALVIGGVLFTALLMRG
Ga0307478_107308362	3300031823	Hardwood Forest Soil	LRLERNTGAVLTQIVETNPAELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTFNATDLTWMALVIGGVLFTTLLMRG
Ga0307478_112295002	3300031823	Hardwood Forest Soil	LAGALARDAQPDETAPQQAYGKAVVARKGARGRIESFREGWKHWVTLNATDLTWTALVIGGVLLTSCLMRGW
Ga0307479_107103182	3300031962	Hardwood Forest Soil	LARDAQPDETAPQQAYGKAVVSRKGARGQIESFREGWKHWVTLNATDLTWTALVIGGVLLTSCLMRGW
Ga0307479_114084471	3300031962	Hardwood Forest Soil	NKSGGALARAVARDALPDETMPEPARSESVVPRKRAGARMGSFREGWKYWVALNATDLIWTALVIGGVLFTSCLMRGW
Ga0307470_109233402	3300032174	Hardwood Forest Soil	GTMLTQIVETNPVELARALARDAQPEQAVPQPAHSEAIMPRKRADGRMGSFREGWKHWVALNANDLVWTALVIGGVLFTTLLMRG
Ga0307471_1010117672	3300032180	Hardwood Forest Soil	TLLRLERNTGAVLTQIVETNPAELAAALARDAQPVEALLPQRTHNAAVVSRKRAGGRMDSFREGWRDWVSLNATDLTWMALVIGGVLFTTLLMRG
Ga0307471_1017614301	3300032180	Hardwood Forest Soil	NPVELAGALARDAQPDETVPQRAHSEAVVSRKRARGRMDSFREGWKDWVTLNATDLTWVALVIGGVLFTALLMRG
Ga0307472_1014862421	3300032205	Hardwood Forest Soil	LAQIVETNPVELAGALARDAQPDETAPQKAYSKAVVTRKRERGRIESFREGWKHWVTLNATDLTWTALVIGGVLLTSCLTRGW
Ga0370541_063484_3_248	3300034680	Soil	QIVETNPVELARALARDAQPDDTMPQPARSEPVAPRKRARGRMGSFREGWKHWVTLNATDLTWTALVIGGVLFTSCLMRGW
Ga0370541_064070_214_501	3300034680	Soil	ATFIRLERTAGTVLAQIVETNPVELAGALAKDAQPGETVPQPAYSKAVVSRTRARDRMASFRQGWKYWVSLNANNLAWTALVIGGVLFTSLLMRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050704

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences