Metagenome / Metatranscriptome Family F050702

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050702
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	62 residues
Representative Sequence	VDIELHQAFVSHFQQEGLASFLIHDIGAFHDLVDFERLLAERAQDIFSIIQHD
Number of Associated Samples	122
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.32 %
% of genes near scaffold ends (potentially truncated)	48.97 %
% of genes from short scaffolds (< 2000 bps)	93.79 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.172 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.276 % of family members)
Environment Ontology (ENVO)	Unclassified (31.034 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.379 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.09% β-sheet: 0.00% Coil/Unstructured: 46.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF01165	Ribosomal_S21	1.38
PF00005	ABC_tran	0.69
PF00561	Abhydrolase_1	0.69
PF07310	PAS_5	0.69
PF12697	Abhydrolase_6	0.69
PF08240	ADH_N	0.69
PF13417	GST_N_3	0.69
PF00753	Lactamase_B	0.69
PF11604	CusF_Ec	0.69
PF09361	Phasin_2	0.69
PF00355	Rieske	0.69
PF00378	ECH_1	0.69
PF02826	2-Hacid_dh_C	0.69
PF06912	DUF1275	0.69
PF00665	rve	0.69
PF06707	DUF1194	0.69
PF01734	Patatin	0.69
PF07369	DUF1488	0.69
PF04392	ABC_sub_bind	0.69
PF13191	AAA_16	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	1.38
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.69
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.69
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.69
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.69
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.69
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.69
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.69
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.69
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.69
COG5388	Uncharacterized conserved protein	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.86 %
Unclassified	root	N/A	4.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.86 %
Unclassified	root	N/A	4.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.17 %
Unclassified	root	N/A	4.14 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	58.62 %
Unclassified	root	N/A	4.14 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.93 %
Unclassified	root	N/A	4.14 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.69 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.69 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	52.41 %
Unclassified	root	N/A	4.14 %
Fimbriimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia	0.69 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	51.03 %
Unclassified	root	N/A	4.14 %
Fimbriimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales	0.69 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	48.28 %
Unclassified	root	N/A	4.14 %
Fimbriimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae	0.69 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium cenepequi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	4.14 %
Unclassified	root	N/A	4.14 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.76 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.76 %
Fimbriimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	0.69 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.69 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium cenepequi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	4.14 %
Unclassified	root	N/A	4.14 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.76 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.38 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	1.38 %
Fimbriimonas ginsengisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli	0.69 %
Symbiodinium pilosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	0.69 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium cenepequi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	4.14 %
Unclassified	root	N/A	4.14 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.76 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.38 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	1.38 %
Fimbriimonas ginsengisoli Gsoil 348	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli → Fimbriimonas ginsengisoli Gsoil 348	0.69 %
Symbiodinium pilosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	0.69 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17347386	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
2140918007\|ConsensusfromContig166504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1236	Open in IMG/M
3300001545\|JGI12630J15595_10054081	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300001867\|JGI12627J18819_10246391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	719	Open in IMG/M
3300002245\|JGIcombinedJ26739_100857738	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300004479\|Ga0062595_101464039	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005764\|Ga0066903_101892173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1142	Open in IMG/M
3300005764\|Ga0066903_102191867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1065	Open in IMG/M
3300006163\|Ga0070715_10679450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300007255\|Ga0099791_10187332	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300007258\|Ga0099793_10248299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300009088\|Ga0099830_10934058	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300009090\|Ga0099827_10553141	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300009551\|Ga0105238_12809759	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300009792\|Ga0126374_10179545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1317	Open in IMG/M
3300009792\|Ga0126374_11477288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	557	Open in IMG/M
3300010043\|Ga0126380_11030221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	696	Open in IMG/M
3300010047\|Ga0126382_10516693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	964	Open in IMG/M
3300010048\|Ga0126373_12383987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	589	Open in IMG/M
3300010048\|Ga0126373_12548926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	570	Open in IMG/M
3300010159\|Ga0099796_10165623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	879	Open in IMG/M
3300010358\|Ga0126370_11215954	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300010361\|Ga0126378_10194900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2099	Open in IMG/M
3300010361\|Ga0126378_10679908	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300010366\|Ga0126379_10572522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1211	Open in IMG/M
3300010376\|Ga0126381_103135240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	655	Open in IMG/M
3300010396\|Ga0134126_12432293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	570	Open in IMG/M
3300010396\|Ga0134126_12774778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	531	Open in IMG/M
3300010854\|Ga0126360_1095124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300010861\|Ga0126349_1000597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1601	Open in IMG/M
3300010862\|Ga0126348_1291440	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010937\|Ga0137776_1159767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	963	Open in IMG/M
3300011269\|Ga0137392_10368809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1190	Open in IMG/M
3300011271\|Ga0137393_10460208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1091	Open in IMG/M
3300011271\|Ga0137393_10716326	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300011271\|Ga0137393_10855270	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300011438\|Ga0137451_1277442	Not Available	527	Open in IMG/M
3300012096\|Ga0137389_11423595	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012096\|Ga0137389_11478786	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300012198\|Ga0137364_10001953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10154	Open in IMG/M
3300012198\|Ga0137364_10274155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1249	Open in IMG/M
3300012199\|Ga0137383_11120091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300012200\|Ga0137382_10366762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1011	Open in IMG/M
3300012200\|Ga0137382_10560414	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300012201\|Ga0137365_10453826	Not Available	943	Open in IMG/M
3300012202\|Ga0137363_10040428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3284	Open in IMG/M
3300012203\|Ga0137399_10182395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1695	Open in IMG/M
3300012203\|Ga0137399_11566704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	546	Open in IMG/M
3300012205\|Ga0137362_10810459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	802	Open in IMG/M
3300012206\|Ga0137380_11047233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	696	Open in IMG/M
3300012207\|Ga0137381_11115071	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300012210\|Ga0137378_10248535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1655	Open in IMG/M
3300012210\|Ga0137378_10330905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1416	Open in IMG/M
3300012210\|Ga0137378_10957277	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300012210\|Ga0137378_11111622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	705	Open in IMG/M
3300012211\|Ga0137377_10238835	All Organisms → cellular organisms → Bacteria → Proteobacteria	1745	Open in IMG/M
3300012211\|Ga0137377_11354511	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012361\|Ga0137360_10337111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1260	Open in IMG/M
3300012400\|Ga0134048_1185114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	572	Open in IMG/M
3300012683\|Ga0137398_11269653	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012918\|Ga0137396_11089414	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012922\|Ga0137394_10837488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	770	Open in IMG/M
3300012923\|Ga0137359_11158965	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012925\|Ga0137419_10339699	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300012927\|Ga0137416_11247136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	670	Open in IMG/M
3300012929\|Ga0137404_10807136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	852	Open in IMG/M
3300012948\|Ga0126375_11830598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	531	Open in IMG/M
3300012971\|Ga0126369_11732669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	714	Open in IMG/M
3300013306\|Ga0163162_10918407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300013308\|Ga0157375_10967100	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300015264\|Ga0137403_10855285	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300015357\|Ga0134072_10294685	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300016294\|Ga0182041_11351266	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300016357\|Ga0182032_11694284	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300016422\|Ga0182039_10984311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	756	Open in IMG/M
3300016445\|Ga0182038_11529322	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300017961\|Ga0187778_10310496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1021	Open in IMG/M
3300017975\|Ga0187782_10333590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1147	Open in IMG/M
3300018031\|Ga0184634_10146424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1058	Open in IMG/M
3300019888\|Ga0193751_1000684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	24831	Open in IMG/M
3300020002\|Ga0193730_1158057	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300020170\|Ga0179594_10288375	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300020199\|Ga0179592_10256088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	785	Open in IMG/M
3300020579\|Ga0210407_10561317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	891	Open in IMG/M
3300021170\|Ga0210400_10850184	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300021180\|Ga0210396_10300877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1420	Open in IMG/M
3300021432\|Ga0210384_11123726	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300022722\|Ga0242657_1045132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	948	Open in IMG/M
3300022724\|Ga0242665_10206163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	650	Open in IMG/M
3300025852\|Ga0209124_10129453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1031	Open in IMG/M
3300026345\|Ga0257148_1025069	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300026548\|Ga0209161_10411878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	594	Open in IMG/M
3300026881\|Ga0207739_1032481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	527	Open in IMG/M
3300026908\|Ga0207787_1026488	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300026945\|Ga0207743_1005984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1398	Open in IMG/M
3300026959\|Ga0207852_1028247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	575	Open in IMG/M
3300027024\|Ga0207819_1031464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	666	Open in IMG/M
3300027326\|Ga0209731_1017622	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300027371\|Ga0209418_1082965	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300027545\|Ga0209008_1032136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1218	Open in IMG/M
3300027587\|Ga0209220_1125557	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300027703\|Ga0207862_1107949	Not Available	837	Open in IMG/M
3300027738\|Ga0208989_10268802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	552	Open in IMG/M
3300027853\|Ga0209274_10367152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli → Fimbriimonas ginsengisoli Gsoil 348	742	Open in IMG/M
3300027882\|Ga0209590_10819650	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031231\|Ga0170824_107361835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1136	Open in IMG/M
3300031544\|Ga0318534_10540840	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031545\|Ga0318541_10336624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	842	Open in IMG/M
3300031561\|Ga0318528_10764236	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031573\|Ga0310915_10726807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	700	Open in IMG/M
3300031668\|Ga0318542_10204594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	996	Open in IMG/M
3300031679\|Ga0318561_10198606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1087	Open in IMG/M
3300031681\|Ga0318572_10800819	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031682\|Ga0318560_10526623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	640	Open in IMG/M
3300031708\|Ga0310686_118016945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	841	Open in IMG/M
3300031718\|Ga0307474_10964370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	675	Open in IMG/M
3300031736\|Ga0318501_10795166	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031753\|Ga0307477_10147868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1639	Open in IMG/M
3300031753\|Ga0307477_10232710	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	1278	Open in IMG/M
3300031780\|Ga0318508_1176214	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031805\|Ga0318497_10565997	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300031833\|Ga0310917_10101587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1852	Open in IMG/M
3300031846\|Ga0318512_10526186	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031890\|Ga0306925_11346360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	707	Open in IMG/M
3300031912\|Ga0306921_10821603	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031941\|Ga0310912_10081252	All Organisms → cellular organisms → Bacteria	2354	Open in IMG/M
3300031941\|Ga0310912_10661824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	811	Open in IMG/M
3300031942\|Ga0310916_10609499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	927	Open in IMG/M
3300031946\|Ga0310910_10978234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	662	Open in IMG/M
3300031946\|Ga0310910_10991442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	657	Open in IMG/M
3300031946\|Ga0310910_11572689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	503	Open in IMG/M
3300031954\|Ga0306926_10194387	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300031981\|Ga0318531_10234560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	828	Open in IMG/M
3300031981\|Ga0318531_10406181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	616	Open in IMG/M
3300032009\|Ga0318563_10480041	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300032025\|Ga0318507_10264215	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300032035\|Ga0310911_10395723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	799	Open in IMG/M
3300032039\|Ga0318559_10293508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	754	Open in IMG/M
3300032059\|Ga0318533_10737159	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300033289\|Ga0310914_10335502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1366	Open in IMG/M
3300033289\|Ga0310914_11876146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	504	Open in IMG/M
3300033433\|Ga0326726_10532133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1126	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.93%
Host-Associated	Host-Associated	2.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.86%
Aquatic	Environmental → Aquatic	2.07%
Plants	Host-Associated → Plants	2.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.17%
Sediment	Environmental → Aquatic → Sediment	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.38%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.69%
Peat	Environmental → Terrestrial → Peat	0.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.38%
Loam	Environmental → Terrestrial → Soil → Loam	12.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.38%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.38%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.38%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.07%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.07%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.38%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010854	Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300026345	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026881	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 15 (SPAdes)	Environmental	Open in IMG/M
3300026908	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 77 (SPAdes)	Environmental	Open in IMG/M
3300026945	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03951680	2088090014	Soil	VDIEFHQTFVSHFQQEGLASFFIHDMGAFHDLAHFERFLAERTQDFFSIIQHD
A_all_C_01600420	2140918007	Soil	SPLVNIEFDQAFVSHFQQERLAGFLIRDIGALHDLVDFERLLAERAQDIFSIIQHGYLL
JGI12630J15595_100540813	3300001545	Forest Soil	LLVGRSPQFRESSDEPLPFVDIELHQAFVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQQD*
JGI12627J18819_102463912	3300001867	Forest Soil	MDIELDQTFVAHFQKEGLASFLIHDIGAFHDFEDFERLLAERLQYIFSIIQHDSTPTITSALNH*
JGIcombinedJ26739_1008577381	3300002245	Forest Soil	RSPQFRESSDEPLPFVDIELHQAFVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQQD*
Ga0062595_1014640391	3300004479	Soil	GRLKHGTLPIYESRDDPSPFVDIELHQAFLSHFQQEGLASFLIHDIGALHDLVDFQRLLAERAQDIFSIIQHDHTP*
Ga0066903_1018921733	3300005764	Tropical Forest Soil	HESSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLAHFERLLAERTQYIFSIIQHD*
Ga0066903_1021918672	3300005764	Tropical Forest Soil	MDIELDQTFVAHLQKEGLASFRIRDIGAPHDLVDCERLLAESAQDIFSIIQHERRAPNH*
Ga0070715_106794502	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VNIEFHQAFVSHFQEEGLASLLIYDIGAFHNFVDFERLLAQRGQDLVTVIQHDYSLPSASGRF*
Ga0099791_101873322	3300007255	Vadose Zone Soil	DEPSPFVDIELNQALVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHDQTPTVT*
Ga0099793_102482992	3300007258	Vadose Zone Soil	VNIEFHQTFAAHFQKEGLADFLIRDIGAFHDLVDFEWLLAEHIQDILPIIQHDYSLKTKP
Ga0099830_109340581	3300009088	Vadose Zone Soil	MTRRSSPQFRESSNEPSPLVDIELHQAFVSHFQQEGLASLLIYDIGSLHNLIHLERLLAERIQDILSI
Ga0099827_105531412	3300009090	Vadose Zone Soil	AAISESSDEPSPFVDIELHEAFVSHFQQQRLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD*
Ga0105238_128097592	3300009551	Corn Rhizosphere	VDVELHQTLVSHLHQEGLAGFLVRDVGAFHDFVNLERLLAERGQDLFSIFQNWLNS*
Ga0126374_101795452	3300009792	Tropical Forest Soil	VDIELHQAFVSHFQQEGLASFFIHDIGALHDLAHFERLLAERTQDIFSIIQHG*
Ga0126374_114772882	3300009792	Tropical Forest Soil	VDIELHQAFLSHFQQKGLASFFIHDIGAFHDLVHFERLLSERLKDIFSIIQHD*
Ga0126380_110302212	3300010043	Tropical Forest Soil	SSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGTFHDLVHFERLLAERVQNIFSIIQHD*
Ga0126382_105166931	3300010047	Tropical Forest Soil	VDIEFHQAFASHFQQEGLASFFIHDMGAFHDLAHFERLLAERTRDMFSIIQRH*
Ga0126373_123839871	3300010048	Tropical Forest Soil	VINAGRSPAIPESSDEPSPFVDIELHQAFVSHFQQEGLAVFFIHDTGSFHDLVQFERFLAERTQDIFSIIQHD*
Ga0126373_125489261	3300010048	Tropical Forest Soil	QRWTVAAISRMSSDEPSPFVDIELHQAFVSHFQQKGLASFFIHDIGAFHDLVHFERLLAERVKDIFSIIQHD*
Ga0099796_101656232	3300010159	Vadose Zone Soil	VNIEFHRSFVSHSQQEKLASFLVRDIGAFHDLVGFERLLMERTQDFVTVIQHEWVSQQPV
Ga0126370_112159542	3300010358	Tropical Forest Soil	DIELDQTFVAHLQKEGLASFRIRDIGAPHDLVDCERLLAESAQDIFSIIQHERRAPNH*
Ga0126378_101949003	3300010361	Tropical Forest Soil	VDIELHQAFVSHFQQEGLASLFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD*
Ga0126378_106799083	3300010361	Tropical Forest Soil	MDIELDQTFVAHFQKEGLASFRIRDIGAPHDLVDCERLLAESAQDIFSIIQHERRAPNH*
Ga0126379_105725223	3300010366	Tropical Forest Soil	MDIELDQTFVAHLQKEGLASFRIRDIGAPHDLVDCERLLAESAQDIFSIIQHERRAPNQ*
Ga0126381_1031352401	3300010376	Tropical Forest Soil	VPSPFVDIELHQAFVSHFQQEGLASFFIHDIRAFHDLVQFERLLAERSQDIFSII*
Ga0134126_124322931	3300010396	Terrestrial Soil	VDIELHQAFVSHFQQEGLTSFFIQDIGAFHDLAQFERLLAERTQDIFSIIQHY*
Ga0134126_127747781	3300010396	Terrestrial Soil	VDVEFHQAFVSHFQQQGLASFFIYDIRPFHNLVRFERLLAERPQDIFSIIQHE*
Ga0126360_10951243	3300010854	Boreal Forest Soil	VNIEFDQAFVSHFQQERLAGFLIQDIGAFHDLVDFERLLAERAQDIFSIIQHGYPL*
Ga0126349_10005973	3300010861	Boreal Forest Soil	MDIEFHRTFVAHLQQERLADFLVRDIGAPHDLAHIERLLAKRVQDVLSIIQHD*
Ga0126348_12914402	3300010862	Boreal Forest Soil	VNIEFHQAFVSHFQQQGLAGFLIHDIGAFHDLVDFERLLAERAQDIFSIIQHGYSSQQTKILTPE*
Ga0137776_11597673	3300010937	Sediment	AFVSHFQQEGLASFFIRDIGASHDLAHFERLLAERVQDILSIIQHDWTPTVT*
Ga0137392_103688094	3300011269	Vadose Zone Soil	LVNIEFHQAFVSHFQQEGLAGFLIHDIGPFHDLVDFERLLAERAQDIFSIIQHDYPL*
Ga0137393_104602081	3300011271	Vadose Zone Soil	SSDEPSPLVNIEFHQAFVSHFQQEGLAGFLIHDIGPFHDLVDFERLLAERAQDIFSIIQHDYSL*
Ga0137393_107163261	3300011271	Vadose Zone Soil	MTRRSSPQFRESSNEPSPLVDIELHQAFVSHFQQEGLASFLIHDIGAFHDFVDFERLLAERAQDIVSIIQHD*
Ga0137393_108552701	3300011271	Vadose Zone Soil	VTSTFLERVAPQFRVSSDEPSPFVDIELHQAFVSHFQQEGLANFLIHDIGAFHDFVDVERLLAERAQDIFSIIQHG*
Ga0137451_12774421	3300011438	Soil	VNIEFHQALVAHFQKERLAGFLIREICAFHDFVDLEWLLAKRIQDILAIFQHDYSPKPDP
Ga0137389_114235952	3300012096	Vadose Zone Soil	VNIEFHQAFVSHFQQEGLAGFLIHDIGPFHDLVDFERLLAERAQDIFSIIQHDCSLQTRK
Ga0137389_114787861	3300012096	Vadose Zone Soil	IELHQAFVSHFQQEGLASFLIHDIGAFHDFVNFERLLAERTQDIFSIIQHD*
Ga0137364_100019535	3300012198	Vadose Zone Soil	VDIELHQAFVSHFQQEGLASFLIHDIGAFHDLVDFERLLAERAQDIFSIIQHD*
Ga0137364_102741553	3300012198	Vadose Zone Soil	PQFPETSDEPSAFVDVELYQAFVSQFQQQGLASFLIHDIGAFHDLVDFERLLAERARDIFSIIQHN*
Ga0137383_111200912	3300012199	Vadose Zone Soil	VNIEFHQTFAAHFQKEGLADFLIRDIGAFHDLVDFEWLLAEHIQDILPIIQHDYSLQTKP
Ga0137382_103667621	3300012200	Vadose Zone Soil	ASHRRCWVRRAAIRKSSDEPSPFVDIELHQAFVSHLQQEGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD*
Ga0137382_105604142	3300012200	Vadose Zone Soil	FVDIELHQAFVSHFQQQGLVSFLIHNIGAFHDLVDFEGLLAERAQDIFSIIQHD*
Ga0137365_104538261	3300012201	Vadose Zone Soil	VDIELHQAFVSHFQQEGLASFLIHDIGAFHDLVDFEWLFAERAQDIFSIIQHD*
Ga0137363_100404282	3300012202	Vadose Zone Soil	VDIELHQAFVSHLQQEGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD*
Ga0137399_101823951	3300012203	Vadose Zone Soil	VDIELHQAFVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD*
Ga0137399_115667041	3300012203	Vadose Zone Soil	VNIELHQAFVSHFQQEGLASLLIYDIGSLHNLIHLERLLAERIQDILS
Ga0137362_108104591	3300012205	Vadose Zone Soil	VNIELHQAFVSHFQQEGLASFLIGDIRAFHNFIDFEWLLTERAQDIFSIIQHDYSLPLASATAQ*
Ga0137380_110472332	3300012206	Vadose Zone Soil	HFQQEGLAGFLVHDIGAFHDLIDFERLLAERFQDIFSIIQHDYSLQTKKP*
Ga0137381_111150711	3300012207	Vadose Zone Soil	DEPSPFVDIELHQAFVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERGQDIFSIIQHD*
Ga0137378_102485355	3300012210	Vadose Zone Soil	VISAGRLLQFRESSDEPSPFVDIELHQAFVSHFQQEGLASFLIHNIGAYHDLVDFEGLLAERAQDTFSIIQHH*
Ga0137378_103309053	3300012210	Vadose Zone Soil	VDIELHQAFVSHFQQKGLVSFLIHNIGAFHDLVDFEGLLAERAQDIFSIIQHD*
Ga0137378_109572771	3300012210	Vadose Zone Soil	QTFVSHFQQEGLARLLIHKIGAFHDLVQFERLLAERAQDIFSVVQHGYTPR*
Ga0137378_111116222	3300012210	Vadose Zone Soil	VHAKLISAGRSPQFRVSSDEPSPFVDIELHQAFVSHFQQEGLASFLIHDIGAFHDLVDFEWLFAERAQDIFSIIQHD*
Ga0137377_102388351	3300012211	Vadose Zone Soil	SDEPLPFVNIELHQTFVSHFQQEGLARLLIHKIGAFHDLVQFERLLAERAQDIFSVVQHGYTPR*
Ga0137377_113545112	3300012211	Vadose Zone Soil	VHAKLISAGRSPQFRVSSDEPSPFVDIELHQAFVSHFQQEGLASFLIYEIGAFHDLVDFEWLFAERVQDIFSIIQHD*
Ga0137360_103371112	3300012361	Vadose Zone Soil	VNIELHQAFVSHFQQEGLASFLIDDIRAFHNFIDFEWLLTERAQDIFSIIQHDYSLPLASATAQ*
Ga0134048_11851141	3300012400	Grasslands Soil	PSPFVDIELHQAFVSHFQQEGLASFLIHDIGAFHDLVDFEWLFAERAQDIFSIIQHGRTPAVTR*
Ga0137398_112696531	3300012683	Vadose Zone Soil	PQFRESSDEPSPFVDIELHQAFVSHFQQEGLASFLIHDIGAFHDFVNFERLLAERTQDIFSII*
Ga0137396_110894141	3300012918	Vadose Zone Soil	GRSPQFRVSFDEPSPFVDIELHQAFVSHLQQEGLAGFLIREIGAFHDFVDFERLLAERAQDIFSIIQHD*
Ga0137394_108374881	3300012922	Vadose Zone Soil	VNIELHQAFVSHFQQEGLASLLIYDIGSLHNLIHLERLLAERIQDILSIIQHDYAPTDTNNTVLAAS
Ga0137359_111589652	3300012923	Vadose Zone Soil	VDIELHQAFVSHFQLEGLASFLIHDIGAFHYLVDFERLFAERAQDIFSIIQHD*
Ga0137419_103396994	3300012925	Vadose Zone Soil	VNIELHQAFVSHFQQEGLASLLIYDIGSLHNLIHLERLLAERIQDILSIIQHDYAPLTPTTPS*
Ga0137416_112471362	3300012927	Vadose Zone Soil	MTRRSSPQFRESSDEPSPFVDIELHQAFVSHFQQEGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD*
Ga0137404_108071361	3300012929	Vadose Zone Soil	EPSPFVDIELHQAFVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD*
Ga0126375_118305981	3300012948	Tropical Forest Soil	QFHGSSDEPSPFVYIELHQAFVSHFQQKGLASFFIHNIGPFHDLVHFERLLAESVQDIFSIIQHD*
Ga0126369_117326692	3300012971	Tropical Forest Soil	VDIELHQAFVSHFQQEGLASFFIHDIGAFHGLVQFERLLAERAQDIFSII*
Ga0163162_109184072	3300013306	Switchgrass Rhizosphere	VNIEFHQALVAHFQKERLAGFLIREICAFHDFVDPEWLLAKRIQDILAIFQHDYSPKPDP
Ga0157375_109671002	3300013308	Miscanthus Rhizosphere	VNIELHQAFVSHFQQEGLTSFFIQDIGAFHDLAQFERLLAERTQDIFSIIQHY*
Ga0137403_108552851	3300015264	Vadose Zone Soil	SESSDEPSPFVDIELHQAFVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHDQTPTVT*
Ga0134072_102946852	3300015357	Grasslands Soil	MPDKHLVKISLWTGSPQYRGSTDKPSPVVDVELHQPFIAHFQQEGLASFLIHDVGAFHDFVDFERFLAESVQDIFSIIQHD*
Ga0182041_113512663	3300016294	Soil	HESSDVPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0182032_116942842	3300016357	Soil	AISRSTDEPSSRMDIEVDQTFVAHFQKEGLASFRIRDIGAPHDLVDCERLLAESAQDIFSIIQHERRAPNH
Ga0182037_112451062	3300016404	Soil	MDVELDQTFVAHFQKESLASFRIRDIGAPCDLVDFERLLAERPQDIVSIIQ
Ga0182039_109843111	3300016422	Soil	ESSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHHLVQFERLLAERAQDIFSII
Ga0182038_115293222	3300016445	Soil	DQRWTVAAIHESSDVPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0187778_103104963	3300017961	Tropical Peatland	VDIELHQAFVSHFQQEGLASFFIHDIGAFHHLVQFERLLAERAQDIFSII
Ga0187782_103335901	3300017975	Tropical Peatland	LALSLAVFCDQRWTVAAIHESSNVPSPFVDIELDQAFVSHFQQEGLASFFIHDIGAFHDLVHFERLLAERAQDIFSIVQHN
Ga0184634_101464243	3300018031	Groundwater Sediment	VNIEFHQALVAHFQKERLAGLLIREICAFHDFVDLEWLLAKRIQDILAIFQHDYSPKPDP
Ga0193751_100068422	3300019888	Soil	VNIEFHQTFFSHFQQQRLADFLIGEIGAFHYLVHFKRLLAERTQDIFSIIQQ
Ga0193730_11580572	3300020002	Soil	VDIELHQTFVSHFQQEGLASFLTRDIRAFYDFVDFERLLAERAQDIFSIIQHD
Ga0179594_102883752	3300020170	Vadose Zone Soil	RSPQFSESSDEPSPFVDIELHQAFVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD
Ga0179592_102560882	3300020199	Vadose Zone Soil	VNIELHQAFVSHFQQEGLASFLIDDIRAFHNFIDFEWLLTERAQDIFSIIQHDYSLPLASATAQ
Ga0210407_105613172	3300020579	Soil	VNIEFHQAFVSHFQEEGLASLLIYDIGAFHNFVDFERLLAQRDQDLVTVIQHDYSLPSASGRF
Ga0210400_108501842	3300021170	Soil	VDIELHQAFVSHFQQEGLASFLIHDIGAFHDLVDFERLLAERAQNIFSIIQQD
Ga0210396_103008771	3300021180	Soil	ESPVISAGRPPKFRESSDEPSPLVGIELHQAIVAHFQQEGLASFLIHGIGAFHDFVHFERLLAERAQNIFSIIQHG
Ga0210384_111237262	3300021432	Soil	RPPKFRESSDEPSPLVGIELHQAIVAHFQQEGLASFLIHGIGAFHDFVHFERLLAERAQNIFSIIQHG
Ga0242657_10451322	3300022722	Soil	VDIELHQAFVSHFQQEGLASFFIHDIGAFHDFVHFERLLAERAQNIFSIIQHG
Ga0242665_102061632	3300022724	Soil	MPSVISAGRPPKFRESSDEPSPFVDIELHQAIVAHFQQEGLASFLIHDIGAFHDFVHFERLLAERAQNIFSIIQHG
Ga0209124_101294532	3300025852	Arctic Peat Soil	VNTEFHQTFAAHFQKEGLADFLIYDIGAFHDLVDFKRLLAERIQDILSIIQHDHSLQTKKTLMLTLE
Ga0257148_10250692	3300026345	Soil	VVSAERSPQFSESSDEPSPFVDIELHQAFVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD
Ga0209161_104118782	3300026548	Soil	VDIELHQAFVSHFQQEGLASFLIHDIGAFHDLVDFEWLFAERAQDIFSIIQHD
Ga0207739_10324812	3300026881	Tropical Forest Soil	VDIELHQAFVSHFQQEGLASFFIYDIGAFHHLVQFERLLAERAQDIFSII
Ga0207787_10264883	3300026908	Tropical Forest Soil	KPRREVVRAIRESSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVHFERLLAERAQDIFSII
Ga0207743_10059843	3300026945	Tropical Forest Soil	VDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSII
Ga0207852_10282471	3300026959	Tropical Forest Soil	VDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0207819_10314642	3300027024	Tropical Forest Soil	VDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVHFERLLAERVQDIFSIIQHD
Ga0209731_10176222	3300027326	Forest Soil	MDIELDQTFVAHFQQEGLASFLIHDIGAFHDFEDFERLLAERLQYIFSIIQHDSTPTITSALNH
Ga0209418_10829652	3300027371	Forest Soil	MDIELDQTFVAHFQKEGLASFLIHDIGAFHDFEDFERLLAERLQYIFSIIQHDSTPTITSALNH
Ga0209008_10321361	3300027545	Forest Soil	MSFVNIELYQTIVSHFQQKGLARLLVRDIGAFHDFVDFEWLLAERAQYILSLIQHDQTPTAADE
Ga0209220_11255572	3300027587	Forest Soil	AGRSPQSSESSDEPSPFVDIELHQAFVSHFQQQGLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD
Ga0207862_11079491	3300027703	Tropical Forest Soil	LSRSGVRDAPSPFVDIELHQTFISHFQEEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0208989_102688021	3300027738	Forest Soil	SSDEPSPFVDIELHQAFVSHFQQEGLASLLVHDIGAFHNLVDFERFLAERAQDIFSIIQH
Ga0209274_103671521	3300027853	Soil	VNIELYQTIVSHFQQKGLARLLVRDIGAFHDFVDFEWLLAQRAQDIRQDHVAARRGR
Ga0209590_108196501	3300027882	Vadose Zone Soil	AAISESSDEPSPFVDIELHEAFVSHFQQQRLASFLIHDIGAFHDFVDFERLLAERAQDIFSIIQHD
Ga0170824_1073618351	3300031231	Forest Soil	MPQKGKFYLLRLSDKPSPAVNIELHQTFVSHFQQEGLASFLISDIGAFHDFVDFERLLAQ
Ga0318534_105408401	3300031544	Soil	VPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0318541_103366241	3300031545	Soil	TLTVAAIHESSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHHLVQFERLLAERAQDIFSII
Ga0318528_107642361	3300031561	Soil	PFVDVELHQASLSHFQQEGLASFLIHDIGALHDLVDFQRLLAKRAQDIFSIIQHNQTPISSTLDQ
Ga0310915_107268072	3300031573	Soil	NAEQSPQLHESSDEPSPFVDIELHQSFVSHFQQEGLASFFIHNIGAFHDLVHFERLLAERVQDIFSIIQHD
Ga0318542_102045943	3300031668	Soil	VAAVHESSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHHLVQFERLLAERAQDIFSII
Ga0318561_101986062	3300031679	Soil	LAVFCDQRWTVAAIHESSDVPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0318572_108008191	3300031681	Soil	IHESSNVPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0318560_105266232	3300031682	Soil	VDIELHQAFISHFQQEGLASFFIHDIGAFHNLVQFERLLAERAQDIFSIIQHD
Ga0310686_1180169452	3300031708	Soil	VNIELYQTFVSHFQEEDLAGLLIHDIGAFHDLIDFEWLLAECAQDILAVIQHD
Ga0307474_109643701	3300031718	Hardwood Forest Soil	MARSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAE
Ga0318501_107951662	3300031736	Soil	LALSLAVFCDQRWTVAAIHESSDVPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0307477_101478682	3300031753	Hardwood Forest Soil	VDIELHQAFVSHFQQEGLASFFIHDIGAFHDLAHFERLLAERAQDIFSIIQHERRAKSL
Ga0307477_102327101	3300031753	Hardwood Forest Soil	MDIELHQAFVPHFQQEGLASFFIRDIGAFHDLAHFERLLAERVQDIFSIIQHD
Ga0318508_11762141	3300031780	Soil	LLQVWRYCKKPLGNRLSRSGVRDAPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHHLVQFERLLAERAQDIFSII
Ga0318497_105659971	3300031805	Soil	IHESSDVPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0310917_101015873	3300031833	Soil	MSSDEPSPFVDIELHQAFVAHFQQEALASFFIHNIGAFHDFVHFERLLAERVQDIFSIIQHD
Ga0310917_107271741	3300031833	Soil	MDIELDQTLVAHFQKEGLASFRIRDIGALHDLVDFERLLAERPQDILSI
Ga0318512_105261862	3300031846	Soil	IHESSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHHLVQFERLLAERAQDIFSI
Ga0306925_113463602	3300031890	Soil	PLIDAEFLYRQPGPVQSSDEPSPFVDIELHQAFVAHFQQEALASFFIHNIGAFHDFVHFERLLAERVQDIFSIIQHD
Ga0306921_108216032	3300031912	Soil	MDIELDQTFVAHLQKEGLASFRIRDIGAPHDLVDCERLLAESAQDIFSIIQHERRAPNH
Ga0310912_100812521	3300031941	Soil	CDQRWTVAAISRMSSDEPSPFVDIELHQAFVAHFQQEALASFFIHNIGAFHDFVHFERLLAERVQDIFSIIQHD
Ga0310912_106618242	3300031941	Soil	VDIELHQAFVSHFQQEGLASFLIHDISAFHDFVDFERLLMERAQDIFSIIQHD
Ga0310912_112691942	3300031941	Soil	MDIELDQTFLAHFQKEGLASFRIRDIGAPCDLVHCERLLAESAQNIFSII
Ga0310916_106094991	3300031942	Soil	HESSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHHLVQFERLLAERAQDIFSII
Ga0310910_109782342	3300031946	Soil	SSLSVLPQFRESSDEPSPCVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLAHLERLLAERPQDIFSIIQHD
Ga0310910_109914421	3300031946	Soil	MDIELDQTFLAHFQKEGLASFRIRDIGAPCDLVHCERLLAESAQNIFSIIQHERRAK
Ga0310910_115726891	3300031946	Soil	VDIELHQAFVSHFQQEGLASFFIYDIGAFHDLVQFERLLAERVQDIFSIIQHD
Ga0306926_101943871	3300031954	Soil	VFCDQRWTVAAISRMSSDEPSPLVDIELHQAFVAHFQQEALASFFIHNIGAFHDFVHFERLLAERVQDIFSIIQHD
Ga0318531_102345601	3300031981	Soil	VDIELHQAFISHFQQEGLASFFIHDIGAFHDLAHFERLLAERPQ
Ga0318531_104061812	3300031981	Soil	RAIRESSDEPSPFVDIELHQAFVSHFQQEGLASFLIHDISAFHDFVDFERLLMERAQDIFSIIQHD
Ga0318563_104800411	3300032009	Soil	DQRWTVAAIHESSDVPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVHFEWLLAERAQDIFSIIQHD
Ga0318507_102642152	3300032025	Soil	AIHESSDVPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHHLVQFERLLAERAQDIFSII
Ga0310911_103957231	3300032035	Soil	HESSDEPSPFVDIELHQSFVSHFQQEGLASFFIHNIGAFHDLVHFERLLAERVQDIFSIIQHD
Ga0318559_102935081	3300032039	Soil	STLTVAAIHESSDEPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHHLVQFERLLAERAQDIFSII
Ga0318533_107371591	3300032059	Soil	MDIELDQTFVAHFQKEGLASFRIRDIGAPCDLVDCERLLAERPQDILSIIEHER
Ga0310914_103355024	3300033289	Soil	ALSLAVFCDQRWTVAAIHESSDVPSPFVDIELHQAFVSHFQQEGLASFFIHDIGAFHDLVQFERLLAERAQDIFSIIQHD
Ga0310914_118761461	3300033289	Soil	EPSPFVDIELHQAFVSHFQQEGLASLFIRDIGAFHDIMQFEQLLAESTQDIFSIVQHN
Ga0326726_105321332	3300033433	Peat Soil	MTFSPQLRGSSDKPSPAVNIELHQAFVSHLQQKGLAGLLIHDIGAFHDLVHFERLLAERTQDIISIIQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050702

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences