Metagenome / Metatranscriptome Family F050697

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050697
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	73 residues
Representative Sequence	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPTNNPAVDTYVSQHGYSSSLVGPTNAEADEGD
Number of Associated Samples	112
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.24 %
% of genes near scaffold ends (potentially truncated)	31.72 %
% of genes from short scaffolds (< 2000 bps)	90.34 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.621 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (41.379 % of family members)
Environment Ontology (ENVO)	Unclassified (53.103 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.517 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.58% β-sheet: 0.00% Coil/Unstructured: 58.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF03631	Virul_fac_BrkB	42.07
PF01451	LMWPc	5.52
PF11752	DUF3309	5.52
PF01068	DNA_ligase_A_M	4.83
PF02518	HATPase_c	1.38
PF00781	DAGK_cat	0.69
PF07730	HisKA_3	0.69
PF00857	Isochorismatase	0.69
PF01028	Topoisom_I	0.69
PF04679	DNA_ligase_A_C	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	42.07
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	5.52
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	4.83
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.38
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.69
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG3569	DNA topoisomerase IB	Replication, recombination and repair [L]	0.69
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.69
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.69
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.69
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.62 %
Unclassified	root	N/A	21.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.62 %
Unclassified	root	N/A	21.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.62 %
Unclassified	root	N/A	21.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.38 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	17.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.38 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	11.72 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.07 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.38 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	11.72 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.07 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.38 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	11.72 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2.07 %
unclassified Oxalobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.38 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	11.72 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.07 %
Oxalobacteraceae bacterium AB_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium AB_14	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.38 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	11.72 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2.07 %
Oxalobacteraceae bacterium AB_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium AB_14	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101201040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1610	Open in IMG/M
3300004479\|Ga0062595_100331357	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005167\|Ga0066672_10071358	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300005167\|Ga0066672_10078318	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300005172\|Ga0066683_10236311	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300005172\|Ga0066683_10446345	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005174\|Ga0066680_10845300	Not Available	547	Open in IMG/M
3300005175\|Ga0066673_10630383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300005179\|Ga0066684_11058143	Not Available	521	Open in IMG/M
3300005180\|Ga0066685_10240755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1247	Open in IMG/M
3300005181\|Ga0066678_10468398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300005186\|Ga0066676_10453929	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005186\|Ga0066676_10512001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	815	Open in IMG/M
3300005186\|Ga0066676_10849413	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005450\|Ga0066682_10399472	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005451\|Ga0066681_10254255	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300005451\|Ga0066681_10377085	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300005468\|Ga0070707_100579132	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300005540\|Ga0066697_10317552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	912	Open in IMG/M
3300005552\|Ga0066701_10452584	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005553\|Ga0066695_10797742	Not Available	545	Open in IMG/M
3300005556\|Ga0066707_10894223	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005557\|Ga0066704_10246399	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300005558\|Ga0066698_10605441	Not Available	738	Open in IMG/M
3300005764\|Ga0066903_102276250	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300005764\|Ga0066903_102621393	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300006031\|Ga0066651_10213085	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300006163\|Ga0070715_10796563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300006791\|Ga0066653_10706863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium AB_14	521	Open in IMG/M
3300006904\|Ga0075424_100863787	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300007255\|Ga0099791_10154929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1071	Open in IMG/M
3300007788\|Ga0099795_10030029	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300009012\|Ga0066710_100718970	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300009012\|Ga0066710_102031213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300009090\|Ga0099827_11048514	Not Available	708	Open in IMG/M
3300009137\|Ga0066709_100982461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1235	Open in IMG/M
3300009137\|Ga0066709_101531946	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300009137\|Ga0066709_101728201	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300009143\|Ga0099792_10054866	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300009143\|Ga0099792_10743331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300010159\|Ga0099796_10162304	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300010159\|Ga0099796_10328344	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300010301\|Ga0134070_10108206	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300010301\|Ga0134070_10387341	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300010361\|Ga0126378_11517403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	760	Open in IMG/M
3300012189\|Ga0137388_11012491	Not Available	766	Open in IMG/M
3300012198\|Ga0137364_10647714	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300012199\|Ga0137383_10449147	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300012199\|Ga0137383_10795966	Not Available	690	Open in IMG/M
3300012200\|Ga0137382_10172509	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300012200\|Ga0137382_10323742	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300012200\|Ga0137382_10460542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300012200\|Ga0137382_10544129	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012201\|Ga0137365_10112381	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300012201\|Ga0137365_10830047	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012201\|Ga0137365_11081766	Not Available	578	Open in IMG/M
3300012202\|Ga0137363_10620701	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300012202\|Ga0137363_10746436	Not Available	829	Open in IMG/M
3300012203\|Ga0137399_10229093	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300012207\|Ga0137381_10342503	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300012207\|Ga0137381_10422050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1164	Open in IMG/M
3300012208\|Ga0137376_10324106	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300012208\|Ga0137376_11466003	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012209\|Ga0137379_10568430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1041	Open in IMG/M
3300012209\|Ga0137379_11130697	Not Available	689	Open in IMG/M
3300012210\|Ga0137378_10610265	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300012210\|Ga0137378_11487726	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012211\|Ga0137377_10629473	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300012285\|Ga0137370_10285042	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012285\|Ga0137370_10603960	Not Available	678	Open in IMG/M
3300012349\|Ga0137387_10094473	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300012350\|Ga0137372_10096558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2486	Open in IMG/M
3300012350\|Ga0137372_10458839	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300012354\|Ga0137366_10126986	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300012355\|Ga0137369_10982227	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300012356\|Ga0137371_10664477	Not Available	798	Open in IMG/M
3300012362\|Ga0137361_10227132	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300012582\|Ga0137358_10656901	Not Available	702	Open in IMG/M
3300012685\|Ga0137397_10945102	Not Available	637	Open in IMG/M
3300012917\|Ga0137395_10067596	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300012922\|Ga0137394_10789114	Not Available	796	Open in IMG/M
3300012923\|Ga0137359_10830748	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300012923\|Ga0137359_11319341	Not Available	610	Open in IMG/M
3300012923\|Ga0137359_11548536	Not Available	551	Open in IMG/M
3300012924\|Ga0137413_10973096	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012929\|Ga0137404_10580340	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300012929\|Ga0137404_12035645	Not Available	536	Open in IMG/M
3300012930\|Ga0137407_10719234	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300012930\|Ga0137407_10897551	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300012930\|Ga0137407_11798849	Not Available	584	Open in IMG/M
3300012944\|Ga0137410_10052855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2899	Open in IMG/M
3300012955\|Ga0164298_10127481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1393	Open in IMG/M
3300012975\|Ga0134110_10126693	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300012976\|Ga0134076_10610069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300014157\|Ga0134078_10681687	Not Available	502	Open in IMG/M
3300015242\|Ga0137412_10004610	All Organisms → cellular organisms → Bacteria	10996	Open in IMG/M
3300015371\|Ga0132258_10687582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2575	Open in IMG/M
3300015374\|Ga0132255_100482044	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300017654\|Ga0134069_1240410	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300018431\|Ga0066655_10917868	Not Available	600	Open in IMG/M
3300018433\|Ga0066667_10070081	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M
3300019789\|Ga0137408_1058066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2302	Open in IMG/M
3300019867\|Ga0193704_1020308	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300019872\|Ga0193754_1011430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	928	Open in IMG/M
3300019876\|Ga0193703_1032676	Not Available	808	Open in IMG/M
3300019877\|Ga0193722_1072454	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300019881\|Ga0193707_1131905	Not Available	717	Open in IMG/M
3300019882\|Ga0193713_1055243	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300019883\|Ga0193725_1004829	All Organisms → cellular organisms → Bacteria	3901	Open in IMG/M
3300019886\|Ga0193727_1047607	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300019887\|Ga0193729_1086605	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300019996\|Ga0193693_1058474	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300019997\|Ga0193711_1019097	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300020004\|Ga0193755_1121115	Not Available	815	Open in IMG/M
3300020004\|Ga0193755_1160662	Not Available	674	Open in IMG/M
3300020006\|Ga0193735_1001112	All Organisms → cellular organisms → Bacteria	8600	Open in IMG/M
3300020010\|Ga0193749_1019606	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300020062\|Ga0193724_1086719	Not Available	646	Open in IMG/M
3300020170\|Ga0179594_10088022	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300021078\|Ga0210381_10238598	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300021080\|Ga0210382_10079528	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300021344\|Ga0193719_10458037	Not Available	518	Open in IMG/M
3300021411\|Ga0193709_1026526	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300021418\|Ga0193695_1092100	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300022756\|Ga0222622_10009004	All Organisms → cellular organisms → Bacteria → Proteobacteria	4655	Open in IMG/M
3300022756\|Ga0222622_11197902	Not Available	559	Open in IMG/M
3300024288\|Ga0179589_10036146	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300025922\|Ga0207646_11061373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300026324\|Ga0209470_1071032	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300026324\|Ga0209470_1186701	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300026326\|Ga0209801_1140748	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300026331\|Ga0209267_1268252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300026332\|Ga0209803_1104863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1151	Open in IMG/M
3300026538\|Ga0209056_10420205	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300026540\|Ga0209376_1101887	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300026557\|Ga0179587_10800335	Not Available	622	Open in IMG/M
3300027512\|Ga0209179_1062687	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300027903\|Ga0209488_10013932	All Organisms → cellular organisms → Bacteria	5867	Open in IMG/M
3300028884\|Ga0307308_10527809	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031091\|Ga0308201_10298470	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031092\|Ga0308204_10301611	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031231\|Ga0170824_115381784	Not Available	732	Open in IMG/M
3300031469\|Ga0170819_10665047	Not Available	616	Open in IMG/M
3300033412\|Ga0310810_10400039	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300033475\|Ga0310811_10912974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	790	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.93%
Host-Associated	Host-Associated	2.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.17%
Aquatic	Environmental → Aquatic	2.76%
Plants	Host-Associated → Plants	2.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.17%
Freshwater	Environmental → Aquatic → Freshwater	1.38%
Sediment	Environmental → Aquatic → Sediment	1.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.03%
Loam	Environmental → Terrestrial → Soil → Loam	4.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	63.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	41.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.07%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1012010403	3300000955	Soil	MKLSIEANVAAAVGVTFVALTVGVIAQENSTDQTGGLNGYGPTNNPAVNTYLSQPGYNSSLIGRTNAEEETKVFW*
Ga0062595_1003313572	3300004479	Soil	MKLSIEAKVAVAVATAFVALTVGAIGQEHRTRQTGGQNGYGPTNNPAVNTYLSEHGYSSSFVGPTKAEPGEGD*
Ga0066672_100713583	3300005167	Soil	MKLSIEAKVAAAVATAFVALTVGVIAQGNSGDQTDGLSGYGPTNNPAVSTHMSQQGYNSSLIGRTNAETDEGN*
Ga0066672_100783182	3300005167	Soil	MKLSIEARVAAAVATAFVALTVGAIGQDHSGGQTGGLNGYGPTNNPAVNTYLSPQGYNSSLISHTNAEADEGN*
Ga0066683_102363112	3300005172	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTTNNPAVNTYLSQRGYSSSLVGNTNAEADKGD*
Ga0066683_104463451	3300005172	Soil	MKLSIEARVAAAVATAFVALTVGAIGQEHSGGQAGGLNEYGPTNNPAVNTYLSPQGYNSSLIAHTNAEADAPFSACASRTF*
Ga0066680_108453001	3300005174	Soil	MKSSIEAKVAAAVATAFVALTVGAIGQEHSRFQTDGQNGYAPTNNPAVNTYLSQRGYSSSLVGNTNAEA
Ga0066673_106303831	3300005175	Soil	MKLSIEARVAAAVATAFVALTVGVIAQTNSASQTGGPNGYGPTSNPGANTHMSQQGYNSSLSGRVNAQENRQK
Ga0066684_110581431	3300005179	Soil	MKLSIEARVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPTNNPAVDTYVSQHGYSGSLVGPTNAEADEGK*
Ga0066685_102407552	3300005180	Soil	MKLSIEARVAAAVATAFVALIVGVIAQEQSGGQIGGPNGYGATNNAGVNSYMSQQGYTNSLIPHTNAEADEGN*
Ga0066678_104683982	3300005181	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNGYGPRNNPAVNTYLSQRGYSSSLVGNTNAEADKGD*
Ga0066676_104539292	3300005186	Soil	MKLSIEAKVAAAVATAFVLLTIGAIGQEHSTFRTGGQNGYGPTNNPAVDTFVSQHGYSSSLVGNTNAEADEGD*
Ga0066676_105120012	3300005186	Soil	MKLSIEAKVAAAVATAFVALIVGAIGQEHSTRQTGGQNGYGPTNNPAVNTYLSPQGYNSSLIAHTNAEADEGK*
Ga0066676_108494131	3300005186	Soil	MKLSIEAKVAAAVATVFVLLTIGAIGQEHSTFRTGGQNGYGPTNHPAVNTYLSQRGYSSSLVGNTNAQADEGD*
Ga0066682_103994722	3300005450	Soil	MKLSIEAKVAAAVATAFVLLTIGAIGQEHSTFRTGGQNGHGPTNHPAVNTYLSQRGYSSSLVGNTNAQADEGD*
Ga0066681_102542552	3300005451	Soil	MKLSIEARVAAAVATAFVALIVGAIAQEQSGGQIGGPNGYGATNNAGVNSYMSQQGYTNSLIPHTNAEADEGN*
Ga0066681_103770851	3300005451	Soil	AMKLSIEARVAAAVATAFVLLTLGAIEQEHSTLRTGGQNGYGPTNNPAVDTYVSQHGYSSSLVGHTNAEADEGD*
Ga0070707_1005791322	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKLSIEAKVAAAVATAFVALTVGVIAQGNSGDQTGGLNGYRPTNNPAVNTHLSQQECNSSLIGRTNAETDEGN*
Ga0066697_103175523	3300005540	Soil	MKLSIEARVAAAVATAFVALIVGVIAQEQSGGQIGGPNGYGATNNAGVNSYMSQQGYTNS
Ga0066701_104525841	3300005552	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNGYGPTNNPAVNTYLSQRGYSSSLVGNTNAEADKGD*
Ga0066695_107977421	3300005553	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNGYGPTNNPAVNTYLSQRGYSSSLVGNTNAEAGKGD*
Ga0066707_108942231	3300005556	Soil	ALIVGAIAQEQSGGQIGGPNGYGATNNAGVNSYLSQQGYTNSLIPHTNAEADEGN*
Ga0066704_102463992	3300005557	Soil	MKLSIEAKVAAAVATAFVALTVGVSAQGNSGDQTDGLSGYGPTNNPAVSTHMSQQGYNSSLIGRTNAETDEGN*
Ga0066698_106054412	3300005558	Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPTNNPAVNTYLSQRGYSSSLVGNTNVEADKGD*
Ga0066903_1022762502	3300005764	Tropical Forest Soil	MKLSIEAKVAASVATAFVALTVGVIAQENSRGQTGRANGPGPTNNPAIETYLTQQAYNRSLAATNAEADEGN*
Ga0066903_1026213932	3300005764	Tropical Forest Soil	MKLSVEAKVAAAVAAGFVTLTVGAIGQEQSRNQAVGLTVYGTRNNSSVNTNLSQQEYNTSLIAHTDEANQASFTTTLR*
Ga0066651_102130852	3300006031	Soil	KAMKLSIEARVAAAVATAFVALIVGAIAQEQSGGQIGGPNGYGATNNAGVNSYMSQQGYTNSLIPHTNAEADEGN*
Ga0070715_107965632	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKLSIEAKVAAAVATAFVALTVGAIGQEHSEGQTGGLNGYGLTNNPAVNMYLSEQGSNSSLIGRTNAE
Ga0066653_107068631	3300006791	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSTFQTGGQNGYGPRNNPAVNTYLSQRGYSSSLVGPTNAGADKGE*
Ga0075424_1008637872	3300006904	Populus Rhizosphere	MKLSIEAKVAAAVATAFVALTLGVIAQENNRGQTGGLNGYGPTNNPDFNTYLSQQAYNRSLAATNAE
Ga0099791_101549291	3300007255	Vadose Zone Soil	REKAMKLSIEARVAAAVATAFVALTVGAIGQKHNTRQTGGQNGYGRTNNPAVNTYLSQHGYSSSLVGPTNAGADEGN*
Ga0099795_100300291	3300007788	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPTNNLAVDTYVSQHGYSSSLVGPTNAEANEGD*
Ga0066710_1007189701	3300009012	Grasslands Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNGYGPTNNPAVNTYLSQRGYSSSLVGNTNAEADKGD
Ga0066710_1020312133	3300009012	Grasslands Soil	MKLSIEARVAAAVATAFVALTVGAIGQDHSGGQTGGLNGYGPTNNPAVNTYLSPQGYNSSLISHT
Ga0099827_110485141	3300009090	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNGYGATNNPAVNTYLSQRGYSSSLVGNTNAEADKGD*
Ga0066709_1009824611	3300009137	Grasslands Soil	MMKLSVEAKVAASVAAGFVALTIGAIGQEQSRNQTGGLNGYGPTNNPTVKTNLSQQEYNGPLIAHSNTDADEGN*
Ga0066709_1015319462	3300009137	Grasslands Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNAYGPTNNPAVNTYLSQRGYSSSLVGNTNAEADKGD*
Ga0066709_1017282012	3300009137	Grasslands Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRGQTGRLNGYAPTNNPAVNTYLNQPGYNSSSIEPH*
Ga0099792_100548662	3300009143	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPPNNLAVDTYVSQHEYSRSLVGPTNAEANEGD*
Ga0099792_107433311	3300009143	Vadose Zone Soil	MKLSIEARVAAAVATAFVALTVGAIGQERSGGQIGKLNGYGPTNNPTVNTYVNQHGYSSS
Ga0099796_101623042	3300010159	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNRYGAPNNLAVDTYVSQHEYSRSLVGPTNAEANEGD*
Ga0099796_103283442	3300010159	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRNGGQNRYGPTNNRAIDTYVSQYGYSSSLVGNTNAESDEGN*
Ga0134070_101082061	3300010301	Grasslands Soil	AMKLSIEARVAAAVATAFVALIVGAIAQEQSGGQIGGPNGYGATNNAGVNSYLSQQGYTNSLIPHTNAEADEGD*
Ga0134070_103873411	3300010301	Grasslands Soil	MKLSIEARVAAAVATAFVALTVGAIGQEQSGGQAGGLNEYGPANNPAVNTYLSPQGYNSSLIAHTNAKADEGN*
Ga0126378_115174032	3300010361	Tropical Forest Soil	MKLSIEAKVAGAVATASVALTLGVIAQENSRGQTGGPNGYGPTKNAGVNTYMSQQRYDSSPVGRTDAEENGHRTQ*
Ga0137388_110124911	3300012189	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNGYGATNNPAVNTYVSQHGDSSSLVGPTNAEADEGD*
Ga0137364_106477141	3300012198	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTIGAIGQEHSTFRTGGQNGYGPTNNLAVDTYVSQHGYGSSLVGPTNAEADEGD*
Ga0137383_104491471	3300012199	Vadose Zone Soil	ARVAAAVATAFVALTVGAIGQERSGGQPGRLNGYGSTNNSAVDTYVSQHGYSSSLVEPTNAEADEGD*
Ga0137383_107959662	3300012199	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNWYGPTNNPAVNTYVSQHGYSSSLVEPINAEADEGD*
Ga0137382_101725093	3300012200	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTIGAIGQEHSTFRTGGQNGYGPTNHPAVNTYLSQRGYSSSLVGNTNAQADEGD*
Ga0137382_103237421	3300012200	Vadose Zone Soil	ARVAAAVGTAFVALIVGAIGQERSGGQTGRLNGYGSTNKPAVDTYVSQHGYSSSLVGPTSAEADQGD*
Ga0137382_104605422	3300012200	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPTNNPAVDTYVSQHGYSSSLVGPTNAEADEGD*
Ga0137382_105441291	3300012200	Vadose Zone Soil	MKLSIEARVAAAVATAFVALTVGAIEQERSGGQIGRLNGYGSTNNPAVDTYVSQHGYSSSLVGHTNAEADEGV*
Ga0137365_101123813	3300012201	Vadose Zone Soil	MKLSIEAKVAAALATAFVLLTIGAIGQEHSTFRTGGQNGYGPTNNPAVDTYVSQHGYSSSLVGPTNAEPDEGD*
Ga0137365_108300472	3300012201	Vadose Zone Soil	MKLSIEARVAAAVATAFVALIVGAIAQEQSGGQIGGPNGYGATNNAGVNSYLSQQGYTNSLIPHTNAEADEGN*
Ga0137365_110817661	3300012201	Vadose Zone Soil	MKLSIEARVAAAVGTAFVALTVGAIGQEHSGSQTGGLNGYGPTNNPAVNTYLSQHRYSSSLVGPTNAEADEGD*
Ga0137363_106207012	3300012202	Vadose Zone Soil	KVAAAVATAFVALTVGAIGQEHSTRQTGGQNGYRPTNNPAINTYLSQHGYSTSLVGPTNAGADEGD*
Ga0137363_107464361	3300012202	Vadose Zone Soil	MKLSIEARVAAAVATAFVALTVGAIGQERSGGQIGKLNGYDPTNNPAVNTYVNQHGYSSSLV
Ga0137399_102290931	3300012203	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGLTNYPAVDTYLSQHGYSSSLVGNTNAEADEGD*
Ga0137381_103425031	3300012207	Vadose Zone Soil	ATAFVALTVGAIGQERSGGQPGRLNGYGSTNNSAVDTYVSQHGYSSSLVEPTNAEADEGD
Ga0137381_104220501	3300012207	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSTRQTGGQNGYGPTNNPAVNTYLSQHGYSSLLIGPTNAGADEGD*
Ga0137376_103241062	3300012208	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPTNNLAVDTYVSQHGYGSSLVGPTNAEADEGD*
Ga0137376_114660031	3300012208	Vadose Zone Soil	QDRKAMKLSIEARVAAAVATAFVLLTLGAIEQEHSTLRTGGQNGYGPTNNPAVDTYVSQHGYSSSLVGHTNAEADEGD*
Ga0137379_105684301	3300012209	Vadose Zone Soil	MKLSIEARVAAAVATAFVALTVGAIGQERSGGQTGRLNGYGSANNPAVDTYVSQHGYSSSLVGNTNA
Ga0137379_111306971	3300012209	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNWYGPTNNPAVNTYVSQHGYSSSLVGPTNAEPDEGD*
Ga0137378_106102651	3300012210	Vadose Zone Soil	SGEGKIEHQDRKAMKLSIEARVAAAVATAFVALTVGAIGQEHSRFQTGGQNGYGPTNNPAVNTYLSQRGYSSSLVGNTNAEADKGD*
Ga0137378_114877262	3300012210	Vadose Zone Soil	HQNRKAMKLSIEARVAAAVATAFVALTVGAIGQERSGGQIDKLNGYGPTNNPAVNTYVNQHGYSSSLVEPINAEADEGD*
Ga0137377_106294731	3300012211	Vadose Zone Soil	MKLSIEARVAAAVATAFVALIVGVIAQEQSGGQIGGPNGYGATNNAGVNSYMSQQGYTNSLIPHTTAEADEGN*
Ga0137370_102850421	3300012285	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNWYGPTNNPAVNTYLSQRGYSSSLVGNTNAEADEGD*
Ga0137370_106039602	3300012285	Vadose Zone Soil	MKLSIEARVAAAVATAFVALTVGAIGQERSGGQIGKLNGYDPTNNPAVNTYVNQHGYSSSLVGPTNAEADEGD*
Ga0137387_100944732	3300012349	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERSRFQTGGQNGYGAANNPAVNTYLSQHGYSSLLIGPTNAGADEGD*
Ga0137372_100965581	3300012350	Vadose Zone Soil	MKLSIEARVAAAVATAFVALTVGAIGQERSGGQPGRLNGYGSTNNSAVDTYVSQHGYSSSLVEPTNAEADEGD*
Ga0137372_104588392	3300012350	Vadose Zone Soil	MKLSIEAKVAAALATAFVLLTIGAIGQEHSTFRTGGQNGYGPTNNPAVDTYVSQHGYSSSLVGPTNAEADEGD*
Ga0137366_101269864	3300012354	Vadose Zone Soil	MKLSIEAKVAAALATAFVLLTIGAIGQEHSTFRTGGQNGYGPTNNPAVDTYVSQHGYSSSSVGNTNAQADEGD*
Ga0137369_109822272	3300012355	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSTFRTGGQNGYGPTNHPAVNTYLSQRGYSSSLVEPTNAEADEGD*
Ga0137371_106644771	3300012356	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTIGAIGQEHSRFQTGGQNGYGPTNNPAVNTYLSQRGYSSSLVGNTNAEADKGD*
Ga0137361_102271322	3300012362	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNGYGTTNNPAVNTYLSQRGYSSSLVGNTNAEADKGD*
Ga0137358_106569011	3300012582	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTIGAIGQEHSTFRTGGQNGYGPTNHPAVNTYLSQHGYSSSLVGNTNAEANEGD*
Ga0137397_109451021	3300012685	Vadose Zone Soil	MKLSIEAKVAAAVATAFAALTVGAIEQEHSTFQTGGQNGYGPTNKPAVNTYLSQRGYSSSLVGPTNAETDERD*
Ga0137395_100675964	3300012917	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHNTFRTGGQNGYGPRNNPAVDTYVSQHGYSSSLVGPTNAEANEGD*
Ga0137394_107891141	3300012922	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGREHSTFRTGGQNGYGLTNYPAVDTYLSQHGYSSSLVGNTNAEADEGD*
Ga0137359_108307482	3300012923	Vadose Zone Soil	RKVSREGKIEHQDRKAMKLSIEARVAAAVATAFVALTVGAIGQERSGGQIGKLNGYDPTNNPAVNTYVNQHGYSSSLVGPTNAEADEGD*
Ga0137359_113193411	3300012923	Vadose Zone Soil	MKLSIEARVAAAVGTAFVALTVGAIGQERSGSQTGRLNGYGSTNNPAVDTYVSQHGYSSSLVGNTNAEADKGD*
Ga0137359_115485361	3300012923	Vadose Zone Soil	MKLSIEARVAAAVGTAFVALTVGAIGQERSGGQISKLNRYGPTNNPAVNTYVNQHGYSS
Ga0137413_109730961	3300012924	Vadose Zone Soil	KKAMKLSIEAKVAATVATAFVLLTLGAIGQEHNTFRTGGQNGRGPTNNLAVDTYVSQHGYNSSMVGPTNAEADEGD*
Ga0137404_105803402	3300012929	Vadose Zone Soil	MKLSIEARVAAAVATAFVALIVGAIGQERSGSQIGRLNGYGSTNNPAVDTYVNQHGYSSSLVEPTNTEADEGD*
Ga0137404_120356451	3300012929	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSTFRTGGQNGYGPTNNLAVDTYVSQHGYSSSLVGPTN
Ga0137407_107192341	3300012930	Vadose Zone Soil	VSGEDKIEHQDRKAMKLSIEARVAAAVATAFVALIVGAIGQERSGSQIGRLNGYGSTNNPAVDTYVNQHGYSSSLVEPTNTEADEGD*
Ga0137407_108975511	3300012930	Vadose Zone Soil	KVSGEDKIEHQDRKAMKLSIEARVAAAVATAFVLLTLGAIEQEHSTLRTGGQNGYGPTNNPAVDTYVSQHGYSSSLVGHTNAEADEGD*
Ga0137407_117988491	3300012930	Vadose Zone Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHNTFRTGGQNGYGPTNNPAVDTYVSQHGYSSSLVGPTNAEADKGD*
Ga0137410_100528555	3300012944	Vadose Zone Soil	MKLSIEARVAAAVGTAFVALTVGAIGQERGGSQTGRVNGYGSTNNPAVDTYVSQHGYSSSLVGNTNAEADEGD*
Ga0164298_101274811	3300012955	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSEGQTGGLNGYGLTNNPAVNMYLSEQGSNSSLIGRTNAEVGEGN*
Ga0134110_101266931	3300012975	Grasslands Soil	KAKGEVCNRSARVKSTSRGKAMKLSIEARVAAAVATAFVALIVGAIAQEQSGGQIGGPNGYGATNNAGVNSYMSQQGYTNSLIPHTNAEADEGN*
Ga0134076_106100691	3300012976	Grasslands Soil	KGERRSLQSIGEGEIDIKRKAMKLSIEARVAAAVATAFVALTVGAIGQDHSGGQTGGLNGYGPTNNPAVNTYLSPQGYNSSLISHTNAEADEGN*
Ga0134078_106816871	3300014157	Grasslands Soil	KAMKLSIEAKVAAAVATAFVALTVGAIGQEHSRFQTGGQNGYGPTNNPAVNTYLSQRGYSSSLVRPTNAEADEGD*
Ga0137412_100046102	3300015242	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRNGGQNRYGPTNNRAIDTYVSQYGYSSSLVGPTSAETDEGD*
Ga0132258_106875826	3300015371	Arabidopsis Rhizosphere	MKLSVEAKVAAAVATAFVTLTVGAIGQDHSTRETGGQNGYGPTNDPAVNTYLSQHGYSSSFVGTTKFESDDGD*
Ga0132255_1004820444	3300015374	Arabidopsis Rhizosphere	MKLSVEAKVAAAVATAFVTLTVGAIGEDHSTRETGGQNGYGPTNDPAVNTYLSQHGYSSSFVGTTKFESDDGD*
Ga0134069_12404101	3300017654	Grasslands Soil	RGKAMKLSIEARVAAAVATAFVALTVGAIGQEQSGGQAGGLNEYGPTNNPAVNTYLSPQGYNSSLIAHTNAEADEGN
Ga0066655_109178682	3300018431	Grasslands Soil	MKLSIEARVAAAVATAFVALIVGAIAQEQSGGQIGGPNGYGATNNAGVNSYMSQQGYTNSLIPHTNAEADAGN
Ga0066667_100700813	3300018433	Grasslands Soil	MKLSIEARVAAAVATAFVALIVGAIAQEQSRGQIGGPNGYGATNNAGVNSYMSQQGYTNSLIPHTNAEADEGN
Ga0137408_10580662	3300019789	Vadose Zone Soil	MKLSIEARVAAAVGTAFVALIVGAIGQERSGGQTGRLNEYGSTNKPAVDTYVSQHGYSSSLVGPTSAEADQGD
Ga0193704_10203084	3300019867	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERSEGQTGRLTGYGPTNNPPVDTYVSQHRYSSSLVAPT
Ga0193754_10114301	3300019872	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERSEGPTGRLTGYGPMNNPAVDTYVSQHGYSSSLVGPTNAETDEGD
Ga0193703_10326761	3300019876	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERNEDQTGRLTGYGPTNNPPVDTYVSQHRYSSSLVAPTNAETDEGD
Ga0193722_10724542	3300019877	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERSEGQTGRLTGYGPTNNPAVDTYVSQHEYSSSLVGPTNAETDEGD
Ga0193707_11319051	3300019881	Soil	MKLSIEAKVAVAVATAFVALTVGAIGQERSEGPTGRLTGYGPMNNPAVDTYVSQHGYSSSLVGPTNAETDEG
Ga0193713_10552432	3300019882	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERSEGQTGRLTGYGPTNNPPVDTYVSQHRYSSSLVAPTNAETDEGD
Ga0193725_10048295	3300019883	Soil	MKLSIEARVAAAVATAFVALTVGAIGQERSGGQPGRLNGYGSTNKPAVDTYVSQHGYSSSLVGPTDAEADEGD
Ga0193727_10476072	3300019886	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQEHSTRQSGGENGYGPTNNPAVNGYPSQHGYSSSLFGPTKAKPDEGG
Ga0193729_10866051	3300019887	Soil	MKLSIEAKVAVAVATAFVALTVGAIEQERSEGQTGRLTRYGPTNNPAVDTYVSQHEYSSSLV
Ga0193693_10584741	3300019996	Soil	AVAVATAFVALSVGAIGQERSEGPTGRLTGYGPTNNPAVDTYVSQHEYSSSLVGPTNAETDEGD
Ga0193711_10190972	3300019997	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERREGQTGRLTGYGPTNNSAVNTYLSQHRYSGSLVGPTNAEADERD
Ga0193755_11211151	3300020004	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERSEGQTGKLTGYGPTNNPPVDTYVSQHGYSSSLVGPTNAETDEGD
Ga0193755_11606621	3300020004	Soil	MKLSIEAKVAVAVATAFVALSVGAIGQERSEGPTGRLTGYGPTNNPAVDTYVSQHEYSSSLVGPTNAETDEGD
Ga0193735_10011125	3300020006	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERSGGQTGRLNGNGSTNNPAVDTYVSQHGYSSSLVGPTNAEPDEGN
Ga0193749_10196062	3300020010	Soil	MKLSIEAKVAVAVATAFVALTVGAIGQERSEGPTGRLTGYGPMNNPAVDTYVSQHGYSSSLVGPTNAETDEGD
Ga0193724_10867192	3300020062	Soil	MKLSIEAKVAAAVATAFVALTVGAIGQERSEGPTGRLTGYGPMNNPAVDTYVSQHGYSSSLVGPTDAEADEGD
Ga0179594_100880223	3300020170	Vadose Zone Soil	MKLSIEARVAAAVGTAFVALIVGAIGQERSGGQTGRLNGYGSTNKPAVDTYVSQHGYSSSLVGPTSAEADEGD
Ga0210381_102385981	3300021078	Groundwater Sediment	VEFEKSGEGKIELQDRKAMKLSIEAKVAAAVATAFVALTVGAIGQERSEGQTGRLTGYGPTNNPPVDTYVSQHRYSSSLVAPTDAETDEGD
Ga0210382_100795282	3300021080	Groundwater Sediment	KLSIEAKVSAAVATAFVALTVGAIGQERSEGQTGRLTGYGPTNSPPVDTYVSQHRYSSSLVGATNAETDEGD
Ga0193719_104580371	3300021344	Soil	MKLSIEARVAAAVATAFVALTVGAIGQEYSGSQTGRLNGYGPTNNPAVNTYRSQHRYSSSLVGPTNAEADEGD
Ga0193709_10265262	3300021411	Soil	MKLSIEAKVAVAVATAFVALTVGAIGQERSEGPTGRLTGYGPTNNPAVDTYVSQHEYSSSLVGPTNAETDEGD
Ga0193695_10921002	3300021418	Soil	MKLSIEARVAAAVATAFVALTVGAIGQEHSGSQTGRLNGYGPTNNPAVNTYLSQHQYSSSLVGPTNAEADEGD
Ga0222622_100090044	3300022756	Groundwater Sediment	MKLSIEAKVAAAVATAFVALTVGAIGQERNEDQTGRLTGYGPTNNPPVDTYVSQHRYSSSLVAPTDAETDEGD
Ga0222622_111979021	3300022756	Groundwater Sediment	MKLSIEAKVAVAVATAFVALTVGAIGQERSEGPTGRLTGYGPTNNPAVDTYVSQHGYSSSLVGPTNAETDEGD
Ga0179589_100361462	3300024288	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRNGGQNRYGPTNNRAIDTYVSQYGYSSSLVGNTNAESDEGN
Ga0207646_110613731	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKLSIEAKVAAAVATAFVALTVGVIAQGNSGDQTGGLNGYRPTNNPAVNTHLSQQECNSSLIGRTNAETDEGN
Ga0209470_10710323	3300026324	Soil	MKLSIEAKVAAAVATAFVLLTIGAIGQEHSTFRTGGQNGYGPTNNPAVDTFVSQHGYSSSLVGNTNAEADEGD
Ga0209470_11867011	3300026324	Soil	MKLSIEAKVAAAVATAFVLLTIGAIGQEHSTFRTGGQNGYGPTNHPAVNTYLSQRGYSSSLVGNTNAQADEGD
Ga0209801_11407481	3300026326	Soil	ARVAAAVATAFVALTVGAIGQDHSGGQTGGLNGYGPTNNPAVNTYLSPQGYNSSLISHTNAEADEGN
Ga0209267_12682522	3300026331	Soil	MKLSIEARVAAAVATAFVALTVGAIGQDHSGGQTGGLNGYGPTNNPAVNTYLSPQGYNS
Ga0209803_11048631	3300026332	Soil	MKLSIEARVAAAVATAFVALTVGAIGQDHSGGQTGGLNGYGPTNNPAVNTYLSPQGYNSSLISHTNAEADEGN
Ga0209056_104202052	3300026538	Soil	SIEARVAAAVATAFVALIVGAIAQEQSRGQIGGPNGYGATNNAGVNSYMSQQGYTNSLIPHTNAEADEGN
Ga0209376_11018871	3300026540	Soil	MKLSIEARVAAAVATAFVALIVGVIAQEQSGGQIGGPNGYGATNNAGVNSYMSQQGYTNSLIPHTNAEADEGN
Ga0179587_108003351	3300026557	Vadose Zone Soil	MKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPPNNLAVDTYVSQHEYSRSLVGPTNAEANEGD
Ga0209179_10626872	3300027512	Vadose Zone Soil	GKAMKLSIEAKVAAAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPTNNLAVDTYVSQHGYSRSLVGPTNAEANEGD
Ga0209488_100139321	3300027903	Vadose Zone Soil	MKLSIEAKVATAVATAFVLLTVGAIGQEHSTFRTGGQNGYGPPNNLAVDTYVSQHEYSRSLVGPTNAEANEGD
Ga0307308_105278091	3300028884	Soil	GKIEHQDRKAMKLSIEAKVAAAVATAFVALTVGAIGQERSGGQTGRLNGNGSTNNPAVDTYVSQHGYSSSLVGPTNAEPDEGN
Ga0308201_102984701	3300031091	Soil	KIELQDRKAMKLSIEAKVAAAVATAFVALTVGAIGQERNEDQTGRLTGYGPTNNPPVDTYVSQHRYSSSLVAPTDAETDEGD
Ga0308204_103016111	3300031092	Soil	IEHQDRKAMKLSIEAKVAVAVATAFVALTVGAIGQERSEGQTGRLTGYGPTNNPAVDTYVSQHGYSSSLVGPTNAETDEED
Ga0170824_1153817841	3300031231	Forest Soil	MKLSIEAKVAATVATAFVALTVGAIGQEHSEGQTGGLNGYGLTNNPAVNMYLSEQGSNSSLIGRTNAEAGEGN
Ga0170819_106650472	3300031469	Forest Soil	MKLSIEAKVAATVATAFVALTVGAIGQEHSEGQTGGLNGYGLTNNPAVNMYLSEQGSNSSLIGRTNAEAAEGN
Ga0310810_104000392	3300033412	Soil	MKLSIEARVAAAVATAFVALTVGVIAQENSRGQTGEANGPGPTTNSAVETYLSQHGYDSSVAGRTNAEADEEN
Ga0310811_109129741	3300033475	Soil	MKLSIEARVAAAVATAFVALTVGVIAQENSRGQTGEANGPGPTTNSAVETYLSQHGYDSSVAGRTNAEADEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050697

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences