Metagenome Family F050669

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F050669
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	48 residues
Representative Sequence	KPVYGLQEYKTPLTGSAKNLKLEISIESNGFDASLQDLTLLHKQGKIR
Number of Associated Samples	115
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.62 %
% of genes from short scaffolds (< 2000 bps)	95.86 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (41.379 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (51.724 % of family members)
Environment Ontology (ENVO)	Unclassified (87.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.586 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF03796	DnaB_C	0.69
PF05866	RusA	0.69
PF13884	Peptidase_S74	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.69
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.69
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.62 %
Unclassified	root	N/A	41.38 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	51.03 %
Unclassified	root	N/A	41.38 %
cellular organisms	root	All Organisms → cellular organisms	7.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	39.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.97 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.59 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	39.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.14 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.76 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	39.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.97 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.76 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	39.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.97 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	39.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.97 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.76 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	39.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.97 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	39.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.97 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	39.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.97 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	2.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.38 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	39.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.97 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10099428	Not Available	957	Open in IMG/M
3300000117\|DelMOWin2010_c10103151	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300001743\|JGI24515J20084_1018145	All Organisms → Viruses → environmental samples → uncultured marine virus	632	Open in IMG/M
3300003478\|JGI26238J51125_1107014	All Organisms → Viruses → environmental samples → uncultured marine virus	525	Open in IMG/M
3300005239\|Ga0073579_1579647	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	873	Open in IMG/M
3300005398\|Ga0066858_10105051	All Organisms → Viruses → environmental samples → uncultured marine virus	824	Open in IMG/M
3300005427\|Ga0066851_10241538	Not Available	563	Open in IMG/M
3300005508\|Ga0066868_10275671	All Organisms → Viruses → environmental samples → uncultured marine virus	510	Open in IMG/M
3300006091\|Ga0082018_1058250	All Organisms → Viruses → environmental samples → uncultured marine virus	696	Open in IMG/M
3300006093\|Ga0082019_1047785	All Organisms → Viruses → environmental samples → uncultured marine virus	770	Open in IMG/M
3300006164\|Ga0075441_10193514	Not Available	759	Open in IMG/M
3300006339\|Ga0068481_1466279	Not Available	756	Open in IMG/M
3300006352\|Ga0075448_10087718	All Organisms → Viruses → environmental samples → uncultured marine virus	980	Open in IMG/M
3300006414\|Ga0099957_1256772	Not Available	511	Open in IMG/M
3300006736\|Ga0098033_1106230	Not Available	797	Open in IMG/M
3300006738\|Ga0098035_1269241	All Organisms → Viruses → environmental samples → uncultured marine virus	559	Open in IMG/M
3300006738\|Ga0098035_1301748	Not Available	522	Open in IMG/M
3300006751\|Ga0098040_1060477	All Organisms → Viruses → environmental samples → uncultured marine virus	1168	Open in IMG/M
3300006751\|Ga0098040_1149196	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	692	Open in IMG/M
3300006752\|Ga0098048_1117559	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300006752\|Ga0098048_1140820	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300006753\|Ga0098039_1307166	Not Available	529	Open in IMG/M
3300006754\|Ga0098044_1376940	All Organisms → Viruses → environmental samples → uncultured marine virus	535	Open in IMG/M
3300006754\|Ga0098044_1414579	Not Available	505	Open in IMG/M
3300006789\|Ga0098054_1047481	All Organisms → Viruses → environmental samples → uncultured marine virus	1650	Open in IMG/M
3300006789\|Ga0098054_1329442	Not Available	544	Open in IMG/M
3300006789\|Ga0098054_1347334	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	527	Open in IMG/M
3300006793\|Ga0098055_1340367	Not Available	558	Open in IMG/M
3300006793\|Ga0098055_1380969	Not Available	523	Open in IMG/M
3300006793\|Ga0098055_1409362	Not Available	502	Open in IMG/M
3300006919\|Ga0070746_10002555	All Organisms → Viruses → environmental samples → uncultured marine virus	10813	Open in IMG/M
3300006921\|Ga0098060_1143624	All Organisms → Viruses → environmental samples → uncultured marine virus	664	Open in IMG/M
3300006923\|Ga0098053_1016376	All Organisms → Viruses → environmental samples → uncultured marine virus	1636	Open in IMG/M
3300006923\|Ga0098053_1107491	All Organisms → Viruses → environmental samples → uncultured marine virus	561	Open in IMG/M
3300006925\|Ga0098050_1036208	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300006925\|Ga0098050_1055531	All Organisms → Viruses → Predicted Viral	1038	Open in IMG/M
3300006927\|Ga0098034_1022067	All Organisms → Viruses → Predicted Viral	1952	Open in IMG/M
3300006928\|Ga0098041_1138636	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	784	Open in IMG/M
3300006929\|Ga0098036_1135747	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300006929\|Ga0098036_1169619	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300006929\|Ga0098036_1179041	All Organisms → Viruses → environmental samples → uncultured marine virus	646	Open in IMG/M
3300006947\|Ga0075444_10395865	All Organisms → Viruses → environmental samples → uncultured marine virus	520	Open in IMG/M
3300007231\|Ga0075469_10148279	All Organisms → Viruses → environmental samples → uncultured marine virus	640	Open in IMG/M
3300007647\|Ga0102855_1189409	Not Available	549	Open in IMG/M
3300007667\|Ga0102910_1178720	Not Available	503	Open in IMG/M
3300007963\|Ga0110931_1150683	All Organisms → Viruses → environmental samples → uncultured marine virus	698	Open in IMG/M
3300007963\|Ga0110931_1201569	All Organisms → Viruses → environmental samples → uncultured marine virus	594	Open in IMG/M
3300008050\|Ga0098052_1403431	Not Available	508	Open in IMG/M
3300009086\|Ga0102812_10759224	Not Available	536	Open in IMG/M
3300009132\|Ga0118730_1219012	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300009412\|Ga0114903_1075697	All Organisms → Viruses → environmental samples → uncultured marine virus	761	Open in IMG/M
3300009425\|Ga0114997_10512706	Not Available	638	Open in IMG/M
3300009428\|Ga0114915_1042347	All Organisms → Viruses → Predicted Viral	1503	Open in IMG/M
3300009428\|Ga0114915_1081919	Not Available	984	Open in IMG/M
3300009441\|Ga0115007_10720777	Not Available	670	Open in IMG/M
3300009512\|Ga0115003_10881019	All Organisms → Viruses → environmental samples → uncultured marine virus	520	Open in IMG/M
3300009605\|Ga0114906_1043119	All Organisms → Viruses → Predicted Viral	1748	Open in IMG/M
3300009620\|Ga0114912_1168548	All Organisms → Viruses → environmental samples → uncultured marine virus	508	Open in IMG/M
3300009705\|Ga0115000_10391383	Not Available	886	Open in IMG/M
3300009705\|Ga0115000_10698036	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	627	Open in IMG/M
3300010149\|Ga0098049_1254898	Not Available	533	Open in IMG/M
3300010153\|Ga0098059_1074885	All Organisms → Viruses → Predicted Viral	1352	Open in IMG/M
3300010153\|Ga0098059_1250144	All Organisms → Viruses → environmental samples → uncultured marine virus	683	Open in IMG/M
3300010883\|Ga0133547_10346915	Not Available	3057	Open in IMG/M
3300017703\|Ga0181367_1042517	All Organisms → Viruses → environmental samples → uncultured marine virus	807	Open in IMG/M
3300017704\|Ga0181371_1081804	Not Available	523	Open in IMG/M
3300017709\|Ga0181387_1139822	All Organisms → Viruses → environmental samples → uncultured marine virus	500	Open in IMG/M
3300017718\|Ga0181375_1063312	Not Available	609	Open in IMG/M
3300017731\|Ga0181416_1027804	All Organisms → Viruses → Predicted Viral	1327	Open in IMG/M
3300017744\|Ga0181397_1140046	All Organisms → Viruses → environmental samples → uncultured marine virus	622	Open in IMG/M
3300017749\|Ga0181392_1147337	All Organisms → Viruses → environmental samples → uncultured marine virus	690	Open in IMG/M
3300017760\|Ga0181408_1180843	Not Available	539	Open in IMG/M
3300017764\|Ga0181385_1185611	Not Available	628	Open in IMG/M
3300017770\|Ga0187217_1080963	Not Available	1114	Open in IMG/M
3300017770\|Ga0187217_1207327	All Organisms → Viruses → environmental samples → uncultured marine virus	647	Open in IMG/M
3300020347\|Ga0211504_1133238	Not Available	548	Open in IMG/M
3300021375\|Ga0213869_10070942	All Organisms → Viruses → Predicted Viral	1754	Open in IMG/M
3300021378\|Ga0213861_10236857	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	972	Open in IMG/M
3300021378\|Ga0213861_10510494	Not Available	568	Open in IMG/M
3300021443\|Ga0206681_10318230	Not Available	603	Open in IMG/M
3300022053\|Ga0212030_1038414	Not Available	673	Open in IMG/M
3300022164\|Ga0212022_1017100	Not Available	1067	Open in IMG/M
3300022227\|Ga0187827_10422815	Not Available	820	Open in IMG/M
3300024237\|Ga0228653_1096386	Not Available	635	Open in IMG/M
3300024348\|Ga0244776_10707484	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	621	Open in IMG/M
(restricted) 3300024517\|Ga0255049_10598309	Not Available	514	Open in IMG/M
(restricted) 3300024517\|Ga0255049_10605115	All Organisms → Viruses → environmental samples → uncultured marine virus	511	Open in IMG/M
(restricted) 3300024520\|Ga0255047_10527949	Not Available	593	Open in IMG/M
3300025038\|Ga0208670_114588	All Organisms → Viruses → environmental samples → uncultured marine virus	843	Open in IMG/M
3300025045\|Ga0207901_1028300	All Organisms → Viruses → environmental samples → uncultured marine virus	762	Open in IMG/M
3300025049\|Ga0207898_1010529	Not Available	1137	Open in IMG/M
3300025050\|Ga0207892_1014046	Not Available	862	Open in IMG/M
3300025050\|Ga0207892_1027241	All Organisms → Viruses → environmental samples → uncultured marine virus	651	Open in IMG/M
3300025052\|Ga0207906_1054619	Not Available	531	Open in IMG/M
3300025078\|Ga0208668_1022537	All Organisms → Viruses → Predicted Viral	1268	Open in IMG/M
3300025082\|Ga0208156_1009689	All Organisms → Viruses → Predicted Viral	2371	Open in IMG/M
3300025082\|Ga0208156_1102868	Not Available	510	Open in IMG/M
3300025084\|Ga0208298_1098355	All Organisms → Viruses → environmental samples → uncultured marine virus	532	Open in IMG/M
3300025085\|Ga0208792_1014921	All Organisms → Viruses → Predicted Viral	1690	Open in IMG/M
3300025097\|Ga0208010_1116883	All Organisms → Viruses → environmental samples → uncultured marine virus	538	Open in IMG/M
3300025099\|Ga0208669_1067924	Not Available	784	Open in IMG/M
3300025099\|Ga0208669_1078962	Not Available	709	Open in IMG/M
3300025099\|Ga0208669_1129961	All Organisms → Viruses → environmental samples → uncultured marine virus	505	Open in IMG/M
3300025108\|Ga0208793_1180983	Not Available	539	Open in IMG/M
3300025109\|Ga0208553_1145402	All Organisms → Viruses → environmental samples → uncultured marine virus	522	Open in IMG/M
3300025110\|Ga0208158_1127422	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	587	Open in IMG/M
3300025114\|Ga0208433_1065399	Not Available	942	Open in IMG/M
3300025128\|Ga0208919_1037201	Not Available	1728	Open in IMG/M
3300025131\|Ga0209128_1215332	All Organisms → Viruses → environmental samples → uncultured marine virus	532	Open in IMG/M
3300025131\|Ga0209128_1222431	Not Available	519	Open in IMG/M
3300025133\|Ga0208299_1077667	Not Available	1174	Open in IMG/M
3300025133\|Ga0208299_1188196	All Organisms → Viruses → environmental samples → uncultured marine virus	621	Open in IMG/M
3300025133\|Ga0208299_1218554	All Organisms → Viruses → environmental samples → uncultured marine virus	554	Open in IMG/M
3300025268\|Ga0207894_1028078	All Organisms → Viruses → Predicted Viral	1007	Open in IMG/M
3300025268\|Ga0207894_1088663	Not Available	523	Open in IMG/M
3300025577\|Ga0209304_1136574	All Organisms → Viruses → environmental samples → uncultured marine virus	519	Open in IMG/M
3300025645\|Ga0208643_1080033	All Organisms → Viruses → environmental samples → uncultured marine virus	933	Open in IMG/M
3300025676\|Ga0209657_1208760	All Organisms → Viruses → environmental samples → uncultured marine virus	514	Open in IMG/M
3300025840\|Ga0208917_1178999	All Organisms → Viruses → environmental samples → uncultured marine virus	719	Open in IMG/M
3300026205\|Ga0208406_1048039	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300026453\|Ga0228644_1036275	Not Available	967	Open in IMG/M
3300027668\|Ga0209482_1094417	Not Available	971	Open in IMG/M
3300027686\|Ga0209071_1045847	All Organisms → Viruses → environmental samples → uncultured marine virus	1338	Open in IMG/M
3300027704\|Ga0209816_1077375	All Organisms → Viruses → environmental samples → uncultured marine virus	1371	Open in IMG/M
3300027704\|Ga0209816_1235990	Not Available	584	Open in IMG/M
3300027801\|Ga0209091_10194648	Not Available	1016	Open in IMG/M
(restricted) 3300027865\|Ga0255052_10410505	Not Available	663	Open in IMG/M
3300028125\|Ga0256368_1039824	All Organisms → Viruses → environmental samples → uncultured marine virus	836	Open in IMG/M
3300028136\|Ga0228608_1091457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300028190\|Ga0257108_1198640	Not Available	570	Open in IMG/M
3300031143\|Ga0308025_1075899	All Organisms → Viruses → environmental samples → uncultured marine virus	1259	Open in IMG/M
3300031519\|Ga0307488_10486406	Not Available	741	Open in IMG/M
3300031569\|Ga0307489_10988744	All Organisms → Viruses → environmental samples → uncultured marine virus	601	Open in IMG/M
3300031602\|Ga0307993_1081887	All Organisms → Viruses → environmental samples → uncultured marine virus	814	Open in IMG/M
3300031658\|Ga0307984_1086917	All Organisms → Viruses → environmental samples → uncultured marine virus	923	Open in IMG/M
3300031659\|Ga0307986_10397466	All Organisms → Viruses → environmental samples → uncultured marine virus	551	Open in IMG/M
3300031688\|Ga0308011_10210168	Not Available	586	Open in IMG/M
3300031696\|Ga0307995_1003780	All Organisms → Viruses → environmental samples → uncultured marine virus	8335	Open in IMG/M
3300031696\|Ga0307995_1180089	All Organisms → Viruses → environmental samples → uncultured marine virus	763	Open in IMG/M
3300031706\|Ga0307997_10142754	All Organisms → Viruses → environmental samples → uncultured marine virus	922	Open in IMG/M
3300031886\|Ga0315318_10656831	All Organisms → Viruses → environmental samples → uncultured marine virus	591	Open in IMG/M
3300032277\|Ga0316202_10303875	Not Available	743	Open in IMG/M
3300032278\|Ga0310345_12357323	All Organisms → Viruses → environmental samples → uncultured marine virus	514	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	61.38%
Coastal	Environmental → Aquatic → Marine → Coastal	11.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.03%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.52%
Strait	Environmental → Aquatic → Marine → Strait	5.52%
Inlet	Environmental → Aquatic → Marine → Inlet	2.76%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.38%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	59.31%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.03%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.03%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.52%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.76%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.76%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.76%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.38%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.38%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.69%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.69%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	51.72%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.52%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.52%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.52%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	4.83%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.14%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	4.14%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.76%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.76%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.38%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.38%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.38%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.38%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.38%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.38%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.38%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.69%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.69%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.69%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.69%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001743	Marine viral communities from the Pacific Ocean - LP-38	Environmental	Open in IMG/M
3300003478	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300006091	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP125	Environmental	Open in IMG/M
3300006093	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007231	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009132	Combined Assembly of Gp0139359, Gp0139510	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300022053	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022164	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300024237	Seawater microbial communities from Monterey Bay, California, United States - 65D	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024517 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3	Environmental	Open in IMG/M
3300024520 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1	Environmental	Open in IMG/M
3300025038	Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl (SPAdes)	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025049	Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)	Environmental	Open in IMG/M
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental	Open in IMG/M
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300025577	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025676	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026205	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A (SPAdes)	Environmental	Open in IMG/M
3300026453	Seawater microbial communities from Monterey Bay, California, United States - 56D	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027686	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027865 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300028136	Seawater microbial communities from Monterey Bay, California, United States - 9D	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031602	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #260	Environmental	Open in IMG/M
3300031658	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031688	Marine microbial communities from water near the shore, Antarctic Ocean - #177	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031706	Marine microbial communities from David Island wharf, Antarctic Ocean - #36	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_100994283	3300000115	Marine	GVTYKPVYGLTEYRTPLTGSAKNIKISIDIQSNGYDASLQDLTLLHKQGKIR*
DelMOWin2010_101031511	3300000117	Marine	LTGSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR*
JGI24515J20084_10181452	3300001743	Marine	HPSNSLYSPIYGFKEYRTPLAGSAKHLKINMAIESNGYDASIQDLTLLHKEGKIR*
JGI26238J51125_11070142	3300003478	Marine	GLQEYRTPLTGSAKNLKLAISIESNGFDASLQSLTLLHKQGKIR*
Ga0073579_15796471	3300005239	Marine	YKPVYGLQEYRTSLTGSAKNLKIEIDITSNGFDASLQELTLLHKQGKIRVIIQFQ
Ga0066858_101050512	3300005398	Marine	AVHTKSATYRPIYGLKEYRMPLLGSAKHLKIAVDIQSNGFDLSIQALTLLHKQGKIR*
Ga0066851_102415382	3300005427	Marine	AVHPASSKYTPIFGLQEYKRPLTGSARYLKLNMAVESNGYDAMIQNLTLLHKEGKIR*
Ga0066868_102756711	3300005508	Marine	KFTPIYGLKEYKTPLTGSAKHLKLNLSIASNGYDASIQDLTLLHKEGKIR*
Ga0082018_10582502	3300006091	Marine	PVYGLKEYRTPLTGSAKNIKIGIDIESNGFDASLQTLTLLHKQGKIR*
Ga0082019_10477852	3300006093	Marine	YGLKEYRTPLTGSAKNIKIGIDIESNGKDASLQTLTLLHKQGKIR*
Ga0075441_101935143	3300006164	Marine	TYAPLYGPKEYRTALTGSAKNLKISISIESNGYDASLQNMTLLHKQGKIR*
Ga0068471_13271101	3300006310	Marine	AGGAHAGGGHVAATHPANSLYAPIYGLKEYKTPLIGTAKNLKLNMSIQSNGYDASIQDLTLLHKEGKIR*
Ga0068481_14662793	3300006339	Marine	GASKYSPIFGLKEYKTPLTGSAKRLKLNLSIESNGYDASIQDLTLLHKEGKIR*
Ga0075448_100877181	3300006352	Marine	HPSSSTYKPVYGLREYRTSLTGSAKNLKISISIQSNGYDASLQDLTLLHKQGKIR*
Ga0099957_12567721	3300006414	Marine	SNSTYAPVFGQREYRTPLTGSAKNIKLAVDIESNGFDASLQDLTLLHKQGKIR*
Ga0098033_11062301	3300006736	Marine	TPLTGSAKHIKINLAVASNGYDAMIQSLTLLHKEGKIQ*
Ga0098035_12692411	3300006738	Marine	PVYGLKEYRTPLTGSAKNIKIGIDIESNGKDASLQTLTLLHKQGKIR*
Ga0098035_13017482	3300006738	Marine	LYKPVYGLKEYRTPLTGSAKNIKIGIDIESNGFDTSLQTLTLLHKQGKIR*
Ga0098040_10604773	3300006751	Marine	LYSPIFGLQEYKTPLTGSAKHLKISLAIASNGYDASIQDLSLLHKEGKIR*
Ga0098040_11491962	3300006751	Marine	LTGSARYLKLNMAVESNGYDAMIQNLTLLHKEGKIR*
Ga0098048_11175591	3300006752	Marine	TYKPIYGLHEYKTPLTGSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR*
Ga0098048_11408201	3300006752	Marine	QEYRTPLTGSAKNLKISIDIQSNGYDASLQDLTLLHKQGKIR*
Ga0098039_13071661	3300006753	Marine	PASSLYKPVYGLKEYRTPLTGSAKNIKIGIDIESNGKDASLQTLTLLHKQGKIR*
Ga0098044_13769401	3300006754	Marine	ATHPSNSTYAPVFGLREYRTPLTGSAKNIKLALDIESNGFDASLQNLTILHKQGKIR*
Ga0098044_14145792	3300006754	Marine	AATHPASSLYKPVYGLKEYRTPLTGSAKNIKIGIDIESNGFDTSLQTLTLLHKQGKIR*
Ga0098054_10474811	3300006789	Marine	HPASSLYKPVYGLKEYRTPLTGSAKNIKIGIDIESNGKDASLQTLTLLHKQGKIR*
Ga0098054_13294421	3300006789	Marine	TYKPVYGLQEYRTPLTGSAKNLKISIGIQSNGYDASLQDLTLLHKQGKIR*
Ga0098054_13473342	3300006789	Marine	YKPIYGLHEYKTPLTGSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR*
Ga0098055_13403672	3300006793	Marine	ATLHSTASTYKPVYGLQEYRTPLTGSAKNLKISIGIQSNGYDASLQDLTLLHKQGKIR*
Ga0098055_13809692	3300006793	Marine	GAHAGGGHNATLHSTASTYKPVYGLQEYRTPLTGSAKNLKISIDIQSNGYDASLQDLTLLHKQGKIR*
Ga0098055_14093622	3300006793	Marine	SSLYKPVYGLKEYRTPLTGSAKNIKIGIDIESNGKDASLQTLTLLHKQGKIR*
Ga0070746_100025551	3300006919	Aqueous	YKTPLTGSAKNLKLEIDIELNVTYASLQDLTLLHKQGKIR*
Ga0098060_11436241	3300006921	Marine	EYKTSLTGSAKNLKLEISIESNGYDTSLQDLTLLHKQGKIR*
Ga0098053_10163761	3300006923	Marine	YGLQEYKTPLTGSAKNLKLEINITSNGFDASLQDLTLLHKQGKIR*
Ga0098053_11074911	3300006923	Marine	HDSAVHPNSSTYKPLYGLQEYKTPLTGSAKNLKLELSIESNGFDTSLQDLTLLHKQGKIR
Ga0098050_10362083	3300006925	Marine	HSTASTYKPVFGLQEYKTPLTGSAKNLKLEISIESNGFDASLQDLTLLHKQGKIR*
Ga0098050_10555311	3300006925	Marine	RTPLTGSAKHIKLSISVASNGYDASIQDLTLLTKEGKIR*
Ga0098034_10220674	3300006927	Marine	RTPLTGSAKNIKIGIDIESNGKDASLQTLTLLHKQGKIR*
Ga0098041_11386361	3300006928	Marine	YKPVYGLQEYRTPLTGSAKNLKIAISIESNGFDTSLQDLTLLHKQGKIR*
Ga0098036_11357473	3300006929	Marine	YKPVYGLQEYRTSLTGSAKNIKISIGVQSNGFDASLQDLTLLHKQGKIR*
Ga0098036_11696193	3300006929	Marine	YKPVFGLQEYKTPLTGSAKNLKLEISIESNGFDASLQDLTLLHKQGKIR*
Ga0098036_11790411	3300006929	Marine	TGSAKHLQLNIAIESNGYDTMIQNLTLLHKEGKIR*
Ga0075444_103958652	3300006947	Marine	VFGLHEYKTPLTGSAKNLKIEIDITSNGFDASLQDLTLLHKQGKIR*
Ga0075469_101482792	3300007231	Aqueous	YGKSGVTYKPVYGLHEYKTPLTGSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR*
Ga0102855_11894092	3300007647	Estuarine	YKPVFGLQEYRTPLTGSAKNLKIAISIESNGFDTSLQDLTLLHKQGKIR*
Ga0102910_11787202	3300007667	Estuarine	HPSNTTYKPVFGLQEYKTPLTGSAKNLKLEISIESNGFDASLQDLTLLHKQGKIR*
Ga0110931_11506832	3300007963	Marine	LYGKSGITYKPVFGLQEYKTPLTGSAKNLKLEISIESNGFDTSLQDLTLLHKQGKIR*
Ga0110931_12015691	3300007963	Marine	HTHDAAVHPSSSTYKPVYGLKEYRTSLTGSAKNLKLALDIQSNGYDASLQNLTLLHKQGKIR*
Ga0098052_14034311	3300008050	Marine	GLKEYKTPLTGSAKHLKLNLSLASNGYDASIQDLTLLHKEGKIR*
Ga0102812_107592241	3300009086	Estuarine	RTPLTGSAKNIKISIDIQSNGYDASLQDLTLLHKQGKIR*
Ga0118730_12190123	3300009132	Marine	GSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR*
Ga0114903_10756972	3300009412	Deep Ocean	GLQEYTTPLTGSAKHLKLNIAIESNGYDTMIQNLTLLHKEGKIR*
Ga0114997_105127061	3300009425	Marine	IAATHPSNSTYKPVYGLQEYRTNLTGSAKNIKLAFSIESNGFNASLQALTLLHKQGKIR*
Ga0114915_10423473	3300009428	Deep Ocean	PLIGSAKYLKISIAIISNGYSTSLQNMTLLHKQGKIR*
Ga0114915_10819193	3300009428	Deep Ocean	VAADHPSNSTYAPVFGLNEYKTPLTGSAKNLKLAISIESNGYDASLQDLILLHKQGKIR*
Ga0115007_107207771	3300009441	Marine	GHTHIAVAHPTASTYAPIYGLHEYRKSLTGSAKNLKISLRIQSNGYDASLQDLTILHKQGKIR*
Ga0115003_108810192	3300009512	Marine	HVAGTHPSSSTYKPVYGLREYRTSLTGSAKNLKISISIQSNGYDASLQDLTLLHKQGKIR
Ga0114906_10431193	3300009605	Deep Ocean	EYRTPLTGSAKNLKLAIDIESNGFDASLQDLTLLHKQGKIR*
Ga0114912_11685481	3300009620	Deep Ocean	TPLTGSAKNIKLALDIESNGFDASLQNLTILHKQGKIR*
Ga0115000_103913831	3300009705	Marine	TFKPVFGLHEYKTPLTGSAKNLKLEIDITSNGFDASLQDLTLLHKQGKIR*
Ga0115000_106980361	3300009705	Marine	THPSNSTYAPVFGLKEYRTSLTGSAKNLKISISIQSNGYDASLQDLTLLHKQGKIR*
Ga0098049_12548981	3300010149	Marine	STASTYKPVYGLQEYRTPLTGSAKNLKISIDIQSNGYDASLQDLTLLHKQGKIR*
Ga0098059_10748851	3300010153	Marine	LTGSAKHLKLALDIESNGFDASLQDLILLHKQGKIR*
Ga0098059_12501441	3300010153	Marine	PIYGLKEYRTSLTGSAKNIKIAIDIESNGYDASLQTLTLLHKQGKIR*
Ga0098059_14212551	3300010153	Marine	TGSAKHLKISMAIASNGYDASIQDLSLLHKEGKIR*
Ga0133547_103469155	3300010883	Marine	PLVGSAKYLKISIEIISNGYSTSLQNMTLLHKQGKIR*
Ga0181367_10425171	3300017703	Marine	SLYKPIYGLKEYRTPLTGSAKNIKIGIDIESNGFDASLQTLTLLHKQGKIR
Ga0181371_10818041	3300017704	Marine	GLREYRTPLTGSARHLKLNVAVESNGYDAMIQNLTLLHKEGKIR
Ga0181387_11398221	3300017709	Seawater	TVHPSSSTYKPVYGLQEYRTSLTGSAKNIKISIGVQSNGFDASLQDLTLLHKQGKIR
Ga0181375_10633121	3300017718	Marine	QEYKTPLTGSAKRLKLNLSIESNGYDASIQDLTLLHKEGKIR
Ga0181416_10278043	3300017731	Seawater	GLQEYRTPLTGSAKNLKIAISIESNGFDTSLQDLTLLHKQGKIR
Ga0181397_11400461	3300017744	Seawater	KPVFGLQEYRTPLTGSAKNLKIAISIESNGFDTSLQDLTLLHKQGKIR
Ga0181392_11473371	3300017749	Seawater	KPVYGLQEYKTPLTGSAKNLKLEISIESNGFDASLQDLTLLHKQGKIR
Ga0181408_11808431	3300017760	Seawater	HEYKTPLTGSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR
Ga0181385_11856111	3300017764	Seawater	EYRTPLTGSAKNLKISIDIQSNGYDASLQDLTLLHKQGKIR
Ga0187217_10809634	3300017770	Seawater	EYKTPLTGSAKNLKLEISIESNGFDASLQDLTLLHKQGKIR
Ga0187217_12073271	3300017770	Seawater	GKAGVTYKPVYGLQEYRTPLTGSAKNIKISIDIQSNGYDASLQDLTLLHKQGKIR
Ga0211504_11332382	3300020347	Marine	SLYGKSGVTYKPVYGLQEYKTPLTGSAKNLKLEISIESNGFDASLQDLTLLHKQGKIR
Ga0213869_100709424	3300021375	Seawater	TYKPVYGLQEYKTSLTGSAKNLKLEISIESNGYDTSLQDLTLLHKQGKIR
Ga0213861_102368573	3300021378	Seawater	TEYRTPLTGSAKNIKISIDIQSNGYDASLQDLTLLHKQGKIR
Ga0213861_105104941	3300021378	Seawater	RTSLTGSAKNLKISISIQSNGYDASLQDLTLLHKQGKIR
Ga0206681_103182301	3300021443	Seawater	NSTYAPVFGLKEYRTPLTGSAKNIKIAIDIESNGFDASLQTLTLLHKQGKIR
Ga0212030_10384143	3300022053	Aqueous	PVYGLTEYRTSLTGSAKNLKISISIQSNGYDASLQDLTLLHKQGKIR
Ga0212022_10171003	3300022164	Aqueous	GKSGVTYKPVYGLTEYRTPLTGSAKNIKISIDIQSNGYDASLQDLTLLHKQGKIR
Ga0187827_104228152	3300022227	Seawater	PIFGLQEYKRPLTGSARYLKLNMAVESNGYDAMIQNLTLLHKEGKIR
Ga0228653_10963863	3300024237	Seawater	TYKPVYGLQEYKTPLTGSAKNLKISISIQSNGYDASLQDLTLLHKQGKIR
Ga0244776_107074841	3300024348	Estuarine	YRTPLTGSAKNLKLAISIESNGFDASLQSLTLLHKQGKIR
(restricted) Ga0255049_105983091	3300024517	Seawater	HPSSSLYKPVFGLKEYRTPLTGSAKNIKIGIDIESNGFDASLQTLTLLHKQGKIR
(restricted) Ga0255049_106051151	3300024517	Seawater	ATHPSNSTYKPVYGLQEYRTPLTGSAKNLKLAISIESNGFDASLQSLTLLHKQGKIR
(restricted) Ga0255047_105279492	3300024520	Seawater	SLYKPVFGLKEYRTPLTGSAKNIKIGIDIESNGFDASLQTLTLLHKQGKIR
Ga0208670_1145881	3300025038	Marine	THDAAVHPANSTYAPVFGLREYRTPLTGSAKNLKIAMDIESTGYDASLQTLTLLHKQGKI
Ga0207901_10283001	3300025045	Marine	AGTHPASSLYAPVFGLKEYRTPLTGSAKNIKISMDIESNGFDASLQTLTLLHKQGKIR
Ga0207898_10105291	3300025049	Marine	TPLTGSAKHFKINLAIESNGFDASIQDLTLLHKEGKIR
Ga0207892_10140462	3300025050	Marine	HDATLHPSNSLYSPIYGLQEYRTPLTGSAKHLKISLAITSNGYDASIQDLTLLHKEGKIR
Ga0207892_10272412	3300025050	Marine	LTGSAKNLKLAVDIESNGFDASLQDLTLLHKQGKIR
Ga0207906_10546192	3300025052	Marine	RTPLTGSAKNIKIAIDIESNGFDASLQTLTLLHKQGKIR
Ga0208668_10225371	3300025078	Marine	GLREYRIPLTGSAKNIKIGIDIESNGFDASLQTLTLLHKQGKIR
Ga0208156_10096894	3300025082	Marine	SASSYYAPVYGLKEYRTPLTGSAKHIKINLAVASNGYDAMIQSLTLLHKEGKIQ
Ga0208156_11028682	3300025082	Marine	SASSYYAPVYGLKEYRTPLTGSAKHIKINLAVASNGYDAMIQNLTLLHKEGKIR
Ga0208298_10983551	3300025084	Marine	EYKTPLTGSAKNLKLELSIESNGFDTSLQDLTLLHKQGKIR
Ga0208792_10149211	3300025085	Marine	RTPLTGSAKHIKLSISVASNGYDASIQDLTLLTKEGKIR
Ga0208010_11168831	3300025097	Marine	RTPLTGSAKNIKIGIDIESNGKDASLQTLTLLHKQGKIR
Ga0208669_10679243	3300025099	Marine	TYKPIYGLHEYKTPLTGSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR
Ga0208669_10789623	3300025099	Marine	TSKFTPIYGLQEYRTPLTGSAKHIKLSISVASNGYDASIQDLTLLTKEGKIR
Ga0208669_11299612	3300025099	Marine	HPSNSTYAPIYGLKEYRTSLTGSAKNIKIAIDIESNGYDASLQTLTLLHKQGKIR
Ga0208793_11809831	3300025108	Marine	KTPLIGTAKNLKLNMSIQSNGYDASIQDLTLLHKEGKIR
Ga0208553_11454021	3300025109	Marine	LQEYRTPLTGSAKHLKISMAIASNGYDASIQDLSLLHKEGKIR
Ga0208158_11274221	3300025110	Marine	VYGLQEYRTSLTGSAKNLKLEISIESNGFDASLQDLTLLHKQGKIR
Ga0208433_10653992	3300025114	Marine	YGLTEYKTPLTGSAKHLKLNMTIQSKGFDTSLQDLTLLHKEGKIR
Ga0208919_10372011	3300025128	Marine	TGSAKNIKISIGVQSNGFDASLQDLTLLHKQGKIR
Ga0209128_12153322	3300025131	Marine	SATYRPIYGLKEYRMPLLGSAKHLKIAIDIQSNGFDLAIQALTLLHKQGKIR
Ga0209128_12224311	3300025131	Marine	HPASSKYTPIFGLQEYKRPLTGSARYLKLNMAVESNGYDAMIQNLTLLHKEGKIR
Ga0208299_10776671	3300025133	Marine	HDATVHPASSRYTPVFGLKEYNTSLTGSAKRLKLNLAIESNGYDASIQDLTLLHKEGKIR
Ga0208299_11881961	3300025133	Marine	TPIYGLKEYRTPLTGSAKHLKLNLSIQSNGYDVSIQDLTLLHKEGKIR
Ga0208299_12185541	3300025133	Marine	LTGSAKNLKLELSIESNGFDTSLQDLTLLHKQGKIR
Ga0207894_10280783	3300025268	Deep Ocean	ASHPASSLYAPIYGLKEYRTPLTGSAKNLKLNITIQSNGYDAPIQELTLLHKEGKIR
Ga0207894_10886632	3300025268	Deep Ocean	EYKTPLIGSAKNLKLNMSIQSNGYDASIQDLTLLHKEGKIR
Ga0209304_11365741	3300025577	Pelagic Marine	PVYGLQEYRTPLTGSAKNIKISIGVQSNGFDASLQDLTLLHKQGKIR
Ga0208643_10800331	3300025645	Aqueous	LTGSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR
Ga0209657_12087602	3300025676	Marine	PLTGSAKNLKLAISIESNGFDASLQSLTLLHKQGKIR
Ga0208917_11789991	3300025840	Aqueous	KTPLTGSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR
Ga0208406_10480393	3300026205	Marine	VYGLKEYRTPLTGSAKNIKIGIDIESNGFDASLQTLTLLHKQGKIR
Ga0228644_10362751	3300026453	Seawater	NNSTYKPIYGLHEYKTPLTGSAKNLKLEIDIESNGFDASLQDLTLLHKQGKIR
Ga0209482_10944173	3300027668	Marine	ATFAPVYGIKEYRTPLIGSAKFLKIQIDIISNGFSTSLQNLTLLHKQGKIR
Ga0209071_10458473	3300027686	Marine	AATHPSSSTFKPVFGLHEYKTPLTGSAKNLKIEIDITSNGFDASLQDLTLLHKQGKIR
Ga0209816_10773753	3300027704	Marine	LTGSAKNLKIEIDITSNGFDASLQDLTLLHKQGKIR
Ga0209816_12359903	3300027704	Marine	IGSAKFLKIQIDIISNGYSTSLQNLTLLHKQGKIR
Ga0209091_101946483	3300027801	Marine	TPLTGSAKNLKLEIDITSNGFDASLQDLTLLHKQGKIR
(restricted) Ga0255052_104105051	3300027865	Seawater	HVAATHPSNSTYTPVYGLEEYKTALTGSAKHLKINMAIVSNGYDASIQDLAILHKQGKIR
Ga0256368_10398242	3300028125	Sea-Ice Brine	HVHVAGTHPSNSTYAPLYGLQEYKTPLTGSAKNLKLAISIESNGYDASLQDLILLHKQGKIR
Ga0228608_10914571	3300028136	Seawater	PVYGLQEYKTPLTGSAKNLKISISIQSNGYDASLQDLTLLHKQGKIR
Ga0257108_11986401	3300028190	Marine	SLTGSAKRLKLNLSIESNGFDASIQDLTLLHKEGKIR
Ga0308025_10758993	3300031143	Marine	HVAGTHPSNSTYAPLYGLQEYKTPLTGSAKNLKLAISIESNGYDASLQDLILLHKQGKIR
Ga0307488_104864061	3300031519	Sackhole Brine	LVGSAKYLKISIEIISNGYSTSLQNMTLLHKQGKIR
Ga0307489_109887442	3300031569	Sackhole Brine	TPLTGSAKNLKIAISIESNGYDTSIQDLILLHKQGKIR
Ga0307993_10818871	3300031602	Marine	TSLTGSAKNLKLSINIQSNGYDASLQDLTLLHKQGKIR
Ga0307984_10869171	3300031658	Marine	FGLHEYKTPLTGSAKNLKLEIDITSNGFDASLQDLTLLHKQGKIR
Ga0307986_103974662	3300031659	Marine	NSLYTPIYGLREYRTSLTGSAKHLKLNLSIESNGFDASIQDLSLLTKEGKIR
Ga0308011_102101682	3300031688	Marine	VAADHPSNSTYAPVFGLNEYKTPLTGSAKNLKLAISIESNGYDASLQDLILLHKQGKIR
Ga0307995_100378011	3300031696	Marine	LTGSAKNLKLAISIESNGYDASLQDLILLHKQGKIR
Ga0307995_11800892	3300031696	Marine	ATHPSNSTYAPVFGLREYRTSLTGSAKNLKLSINIQSNGYDASLQDLTLLHKQGKIR
Ga0307997_101427543	3300031706	Marine	GLREYRTSLTGSAKNLKISISIQSNGYDASLQDLTLLHKQGKIR
Ga0315318_106568312	3300031886	Seawater	LTGSAKRLKLNLSIESNGYDASIQDLTLLHKEGKIR
Ga0316202_103038751	3300032277	Microbial Mat	TYKPVYGLQEYRTPLTGSAKNIKISIDIQSNGFDASLQDLTLLHKQGKIR
Ga0310345_123573231	3300032278	Seawater	EYRTSLTGSAKNIKIAIDIESNGYDASLQTLTLLHKQGKIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters