Metagenome / Metatranscriptome Family F050640

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050640
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	55 residues
Representative Sequence	DEHTNNLFLQTRGLPTPATGEQAHYILERLAGLSRPFGTTVEVKGDTAEIKLKGGN
Number of Associated Samples	129
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.69 %
% of genes near scaffold ends (potentially truncated)	99.31 %
% of genes from short scaffolds (< 2000 bps)	91.72 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.103 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.172 % of family members)
Environment Ontology (ENVO)	Unclassified (24.828 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.19% β-sheet: 11.90% Coil/Unstructured: 61.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF13360	PQQ_2	2.76
PF00072	Response_reg	2.07
PF00903	Glyoxalase	2.07
PF13620	CarboxypepD_reg	2.07
PF04072	LCM	2.07
PF07883	Cupin_2	1.38
PF13442	Cytochrome_CBB3	1.38
PF07478	Dala_Dala_lig_C	1.38
PF01161	PBP	1.38
PF04389	Peptidase_M28	1.38
PF06537	DHOR	1.38
PF01740	STAS	0.69
PF08282	Hydrolase_3	0.69
PF13581	HATPase_c_2	0.69
PF03069	FmdA_AmdA	0.69
PF07969	Amidohydro_3	0.69
PF13715	CarbopepD_reg_2	0.69
PF14534	DUF4440	0.69
PF03972	MmgE_PrpD	0.69
PF08241	Methyltransf_11	0.69
PF13531	SBP_bac_11	0.69
PF07690	MFS_1	0.69
PF00132	Hexapep	0.69
PF09587	PGA_cap	0.69
PF12698	ABC2_membrane_3	0.69
PF07394	DUF1501	0.69
PF14103	DUF4276	0.69
PF00271	Helicase_C	0.69
PF00392	GntR	0.69
PF07238	PilZ	0.69
PF03572	Peptidase_S41	0.69
PF08003	Methyltransf_9	0.69
PF01741	MscL	0.69
PF00732	GMC_oxred_N	0.69
PF00107	ADH_zinc_N	0.69
PF01523	PmbA_TldD	0.69
PF02538	Hydantoinase_B	0.69
PF13376	OmdA	0.69
PF01979	Amidohydro_1	0.69
PF01436	NHL	0.69
PF04199	Cyclase	0.69
PF00756	Esterase	0.69
PF01925	TauE	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.07
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.38
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	1.38
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.38
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.69
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.69
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.69
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.69
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.69
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.69
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.69
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.69
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.69
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.69
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.69
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.79 %
Unclassified	root	N/A	6.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.79 %
Unclassified	root	N/A	6.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.10 %
Unclassified	root	N/A	6.21 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.86 %
Unclassified	root	N/A	6.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.03 %
Unclassified	root	N/A	6.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.69 %
Candidatus Diapherotrites	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Diapherotrites	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.34 %
Unclassified	root	N/A	6.21 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.76 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.69 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.69 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.69 %
unclassified Diapherotrites	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Diapherotrites → unclassified Diapherotrites	0.69 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.69 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.34 %
Unclassified	root	N/A	6.21 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.38 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.69 %
Candidatus Diapherotrites archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Diapherotrites → unclassified Diapherotrites → Candidatus Diapherotrites archaeon	0.69 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.69 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.69 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.69 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.34 %
Unclassified	root	N/A	6.21 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.38 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.69 %
Candidatus Diapherotrites archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Diapherotrites → unclassified Diapherotrites → Candidatus Diapherotrites archaeon	0.69 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.69 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.34 %
Unclassified	root	N/A	6.21 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.38 %
Parcubacteria group bacterium GW2011_GWA2_40_23	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_40_23	0.69 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.69 %
Candidatus Diapherotrites archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Diapherotrites → unclassified Diapherotrites → Candidatus Diapherotrites archaeon	0.69 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.69 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.34 %
Unclassified	root	N/A	6.21 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.38 %
Mesorhizobium sp. WSM2561	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. WSM2561	0.69 %
Parcubacteria group bacterium GW2011_GWA2_40_23	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_40_23	0.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.69 %
Candidatus Diapherotrites archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Diapherotrites → unclassified Diapherotrites → Candidatus Diapherotrites archaeon	0.69 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.69 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402FO91L	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300004092\|Ga0062389_102674327	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300004152\|Ga0062386_101094757	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005163\|Ga0066823_10102984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. WSM2561	588	Open in IMG/M
3300005434\|Ga0070709_11195419	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300005447\|Ga0066689_10187225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1250	Open in IMG/M
3300005451\|Ga0066681_10412691	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005458\|Ga0070681_10430370	All Organisms → cellular organisms → Bacteria → Proteobacteria	1232	Open in IMG/M
3300005535\|Ga0070684_100223338	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300005543\|Ga0070672_100293747	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300005617\|Ga0068859_100146386	All Organisms → cellular organisms → Bacteria → Acidobacteria	2437	Open in IMG/M
3300005764\|Ga0066903_106676475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	600	Open in IMG/M
3300005842\|Ga0068858_100829488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300005921\|Ga0070766_11164005	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300006050\|Ga0075028_100936945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300006172\|Ga0075018_10181626	Not Available	988	Open in IMG/M
3300006174\|Ga0075014_100817357	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300006354\|Ga0075021_10035791	All Organisms → cellular organisms → Bacteria	2838	Open in IMG/M
3300006797\|Ga0066659_11694613	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300006852\|Ga0075433_11714198	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300006881\|Ga0068865_102187224	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006954\|Ga0079219_11102245	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300007232\|Ga0075183_10922128	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300007253\|Ga0075182_11164887	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300007255\|Ga0099791_10020524	All Organisms → cellular organisms → Bacteria → Acidobacteria	2837	Open in IMG/M
3300009038\|Ga0099829_10106433	All Organisms → cellular organisms → Bacteria → Acidobacteria	2189	Open in IMG/M
3300009089\|Ga0099828_10112336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	2371	Open in IMG/M
3300009156\|Ga0111538_10383232	All Organisms → cellular organisms → Bacteria → Acidobacteria	1780	Open in IMG/M
3300009616\|Ga0116111_1058334	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300010048\|Ga0126373_11883503	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300010333\|Ga0134080_10599317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300010358\|Ga0126370_11854196	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300010359\|Ga0126376_12507056	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300010379\|Ga0136449_100865911	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300011120\|Ga0150983_11085950	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300011120\|Ga0150983_11336121	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300011120\|Ga0150983_11464905	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300011120\|Ga0150983_14701957	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300011269\|Ga0137392_10875580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300012189\|Ga0137388_11052633	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300012189\|Ga0137388_11411524	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012202\|Ga0137363_11736944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300012205\|Ga0137362_11504988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012206\|Ga0137380_11493874	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300012207\|Ga0137381_11385500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012211\|Ga0137377_10542432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300012212\|Ga0150985_121132191	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300012357\|Ga0137384_10039353	All Organisms → cellular organisms → Bacteria	3899	Open in IMG/M
3300012685\|Ga0137397_10453640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	955	Open in IMG/M
3300012918\|Ga0137396_10485336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300012923\|Ga0137359_10854761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300012925\|Ga0137419_11106120	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300012925\|Ga0137419_11506673	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012925\|Ga0137419_11967181	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300012930\|Ga0137407_12367803	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012975\|Ga0134110_10415487	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012987\|Ga0164307_10698820	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300014168\|Ga0181534_10743756	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300014169\|Ga0181531_10767765	Not Available	601	Open in IMG/M
3300014501\|Ga0182024_10470647	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300014968\|Ga0157379_10479392	All Organisms → cellular organisms → Bacteria → Acidobacteria	1151	Open in IMG/M
3300015372\|Ga0132256_100478606	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300016294\|Ga0182041_10098828	All Organisms → cellular organisms → Bacteria → Acidobacteria	2138	Open in IMG/M
3300016341\|Ga0182035_11394938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300016404\|Ga0182037_12005281	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300017928\|Ga0187806_1206964	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300017930\|Ga0187825_10079771	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300017930\|Ga0187825_10257432	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300017939\|Ga0187775_10300744	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300017948\|Ga0187847_10675519	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300017955\|Ga0187817_10080229	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300017973\|Ga0187780_10925641	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300017994\|Ga0187822_10246889	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300017996\|Ga0187891_1205598	Not Available	670	Open in IMG/M
3300018012\|Ga0187810_10368063	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300018025\|Ga0187885_10253017	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300018026\|Ga0187857_10322481	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300018040\|Ga0187862_10883464	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300019786\|Ga0182025_1117469	Not Available	1085	Open in IMG/M
3300020579\|Ga0210407_10608711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	851	Open in IMG/M
3300020583\|Ga0210401_10815207	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300021168\|Ga0210406_10425880	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300021171\|Ga0210405_10784970	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300021181\|Ga0210388_10380851	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300021181\|Ga0210388_10993110	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300021401\|Ga0210393_10509547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	983	Open in IMG/M
3300021406\|Ga0210386_10160743	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300021406\|Ga0210386_11550014	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300021432\|Ga0210384_10298582	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300021433\|Ga0210391_11527749	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300021476\|Ga0187846_10056908	All Organisms → cellular organisms → Bacteria → Acidobacteria	1720	Open in IMG/M
3300021559\|Ga0210409_10483729	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300022531\|Ga0242660_1028791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300022533\|Ga0242662_10269418	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300022722\|Ga0242657_1034645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1038	Open in IMG/M
3300025453\|Ga0208455_1102524	Not Available	542	Open in IMG/M
3300025912\|Ga0207707_10205382	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300025924\|Ga0207694_10363762	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300025939\|Ga0207665_10723372	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300025945\|Ga0207679_11697836	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300026331\|Ga0209267_1147607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300026343\|Ga0209159_1059809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1813	Open in IMG/M
3300026482\|Ga0257172_1061326	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300026532\|Ga0209160_1205407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300027643\|Ga0209076_1038411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1345	Open in IMG/M
3300027867\|Ga0209167_10162433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300027889\|Ga0209380_10117732	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300027903\|Ga0209488_10501343	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300027905\|Ga0209415_10162958	All Organisms → cellular organisms → Bacteria → Acidobacteria	2205	Open in IMG/M
3300027908\|Ga0209006_11319947	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300027986\|Ga0209168_10220423	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Diapherotrites → unclassified Diapherotrites → Candidatus Diapherotrites archaeon	945	Open in IMG/M
3300028536\|Ga0137415_10395110	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300028906\|Ga0308309_10344180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1270	Open in IMG/M
3300029636\|Ga0222749_10520968	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300030054\|Ga0302182_10243111	Not Available	764	Open in IMG/M
3300030659\|Ga0316363_10184769	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031199\|Ga0307495_10140648	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300031231\|Ga0170824_110416955	All Organisms → cellular organisms → Bacteria → Acidobacteria	1116	Open in IMG/M
3300031231\|Ga0170824_110571463	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031231\|Ga0170824_120233842	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300031236\|Ga0302324_100814991	All Organisms → cellular organisms → Bacteria → Acidobacteria	1297	Open in IMG/M
3300031524\|Ga0302320_12131944	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300031708\|Ga0310686_109418772	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300031712\|Ga0265342_10471209	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300031715\|Ga0307476_10279422	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223	Open in IMG/M
3300031720\|Ga0307469_11002325	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300031720\|Ga0307469_11021937	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	773	Open in IMG/M
3300031753\|Ga0307477_10696005	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300031819\|Ga0318568_10701850	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300031823\|Ga0307478_10016476	All Organisms → cellular organisms → Bacteria → Acidobacteria	5156	Open in IMG/M
3300031823\|Ga0307478_11751229	Not Available	511	Open in IMG/M
3300031954\|Ga0306926_10991570	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300032091\|Ga0318577_10610131	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300032160\|Ga0311301_10400135	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300032174\|Ga0307470_11853677	Not Available	512	Open in IMG/M
3300032180\|Ga0307471_103547375	Not Available	552	Open in IMG/M
3300032205\|Ga0307472_101050378	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300032205\|Ga0307472_101431064	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300032783\|Ga0335079_11139044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_40_23	788	Open in IMG/M
3300032805\|Ga0335078_10303416	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300032892\|Ga0335081_10846397	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300032893\|Ga0335069_10680153	All Organisms → cellular organisms → Bacteria → Acidobacteria	1172	Open in IMG/M
3300032893\|Ga0335069_12115410	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300032954\|Ga0335083_10215616	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300032954\|Ga0335083_11156460	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.34%
Host-Associated	Host-Associated	8.28%
Engineered	Engineered	1.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.86%
Aquatic	Environmental → Aquatic	14.48%
Plants	Host-Associated → Plants	8.28%
Wastewater	Engineered → Wastewater	1.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.10%
Freshwater	Environmental → Aquatic → Freshwater	11.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.52%
Sediment	Environmental → Aquatic → Sediment	2.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.76%
Peat	Environmental → Terrestrial → Peat	2.07%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	1.38%
Cave	Environmental → Terrestrial → Cave	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.72%
Loam	Environmental → Terrestrial → Soil → Loam	9.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.07%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	1.38%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.38%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.14%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.07%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.07%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.38%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.69%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007232	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 A2 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007253	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 A1 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08862540	2189573004	Grass Soil	LFLQTRGLPKPVMGPQSYYILQRLADLSRPFGTNIEVTGDSAEINLKTGSKPAQ
Ga0062389_1026743271	3300004092	Bog Forest Soil	QGQPDVHDEQTNNLFLQTRGLPKPATGEQAHYIFARLADLSRPFGTTIEVNGDTAEIKLKAGN*
Ga0062386_1010947572	3300004152	Bog Forest Soil	NNLFLQTRGLPMPATGEQASYILQRLADASRPLGTMVVLKADTAEITLNHRN*
Ga0066823_101029841	3300005163	Soil	LQTRGLPKPATGNQARYILERLATASRPFGTTIAITGETATIRLR*
Ga0070709_111954191	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	IGEGEPDAHDGHTNNLFLDTRGLPKPATGDQARYILERLADSSRPFGTIVEVKGDTAMIKLKGRN*
Ga0066689_101872251	3300005447	Soil	TNNLFLQTRGLPKLATGDQAGYILQRLADSSRPFGTKVVVKGDMAEIDLKNGN*
Ga0066681_104126911	3300005451	Soil	GQGEPDLHDEHTNNLFLQSRGLPKPATGDQAGYILQRLADSSRPFGTKVVVKGDVAEIDLKNGN*
Ga0070681_104303701	3300005458	Corn Rhizosphere	ADFFDEHTNNEFLQTRGLPKPAAGDQARYILERLADLCKPFGTNVAITGDTAEIKLTASK
Ga0070684_1002233382	3300005535	Corn Rhizosphere	QPDVHDEHTDNLFRQTRGLPRLATGEQAHYILERLADLSRPFGTAVVVNGDMAEIKLNPGK*
Ga0070672_1002937471	3300005543	Miscanthus Rhizosphere	TINLFLQTRGLPHPATGTQARYILERLANQSRPFGTATEIAGDTAAITLTGGR*
Ga0068859_1001463862	3300005617	Switchgrass Rhizosphere	DAHDPSTINLFLQTRGLPRPATGMQAHYILERLANLSRPFGTAIESTGETAAIRLAR*
Ga0066903_1066764752	3300005764	Tropical Forest Soil	NLFLQTRGLPKPATGDQAGYILQRLADSSRPFGTKMVVKADVAEIDLKNGN*
Ga0068858_1008294882	3300005842	Switchgrass Rhizosphere	DAHDPSTINLFLQTRGLPRPATGMQARYILERLANLSRPFGTAVEITGDTAAIRLAK*
Ga0070766_111640051	3300005921	Soil	GKGEADVHNGHTNNQFLDTRGLPKPATGERARIILDRLADSSRPFGTTVEVKGETAEIHLKGGK*
Ga0075028_1009369451	3300006050	Watersheds	GQGDADVHNGHTNNQFLDTRGLPKPATGERARYILERLADSSRPFGTRVEVKGDTAEVHPKGGN*
Ga0075018_101816262	3300006172	Watersheds	LPESPRPFLATRGLPKPVTGEQAIYILGRLTELSRPFGTTVVVKGDTAAIHLNSGK*
Ga0075014_1008173571	3300006174	Watersheds	GEGQPDVHEEHTDNLFLETRGLPKPATGEQAHYILKRLADLSRPFGTTVVVNGDMAEIKLKSGK*
Ga0075021_100357914	3300006354	Watersheds	PDFQNERTNNLFLQTRGLPTPATGEQAHYILERLANLSRPFGTTIVAKGDTAEIKFSGKN
Ga0066659_116946132	3300006797	Soil	NLFLDTRGLPKPATGDQARYILERLADSSRPFGTTVEVKGETAEINLKGGN*
Ga0075433_117141982	3300006852	Populus Rhizosphere	QGQPDLQDEHTNNLFLQTRGLPRPATGDQAGYILQRLADSSRPFGTKVVVKGDTAEINLKEGN*
Ga0068865_1021872242	3300006881	Miscanthus Rhizosphere	FLQTRGLPKPATGEQAHYILERLADLSRPFGTTMVVNGDTAEIKLNSGK*
Ga0079219_111022452	3300006954	Agricultural Soil	GEGQPDAHDPSTINLFLQTRGLPRPATGAQAYYILQRLANLSRPFGTSIEITDETASIRLPR*
Ga0075183_109221281	3300007232	Wastewater Effluent	EFNPNLFLRTRGLPKAVDGEQAHYILQRLVELSRPFGTAIDVNGSTATVRLTEGK*
Ga0075182_111648871	3300007253	Wastewater Effluent	GNPDIQNEFNPNLFLRTRGLPKAVDGEQAHYILQRLVELSRPFGTAIDVNGSTATVRLTEGK*
Ga0099791_100205241	3300007255	Vadose Zone Soil	LQTRGLPKLATGDQARYILQRLADSSGPFGTTVEVKGDTAEIKLKAGN*
Ga0099829_101064331	3300009038	Vadose Zone Soil	NNLFLQTRGLPKLATGDQARYILQRLADTSRPFGTIVAVKGDTAEIELKRGN*
Ga0099828_101123361	3300009089	Vadose Zone Soil	QGQPDTQDEHTNNLFLQTRGLPKLATGEQALYILQRLADASRPFGTTVAVKGETAEIQLKRGN*
Ga0111538_103832321	3300009156	Populus Rhizosphere	PDAHDPSTINLFLQTRGLPRPATGTQARYILERLASLSRPFGTAIEIAGDTAAITLTGGR
Ga0116111_10583341	3300009616	Peatland	TRGLPAPAEGEQATYILKRVAELSEPFGTTVAVKGDTAEIVLKGGK*
Ga0126373_118835031	3300010048	Tropical Forest Soil	NNLFLQTRGLPTPATGEQAHYILERLAHLSRPFGTRVEVTGETAEIKLKGGN*
Ga0134080_105993171	3300010333	Grasslands Soil	RGLPKPATGDQAGYILQRLADSSRPFGTRGVVRGDVAEIDLKNGN*
Ga0126370_118541961	3300010358	Tropical Forest Soil	QTRGLPKPATGDQAGDILQRLADSSRPFGTKVELKGETAEINLKDGN*
Ga0126376_125070561	3300010359	Tropical Forest Soil	DEHTNNEFLQTRGLPKPATGDQARYILERLTNLSRPFGTKVVTHGDTAEIDLRPN*
Ga0136449_1008659111	3300010379	Peatlands Soil	TQDEHTNNLFLQTRGLPKPATGDQARYILERLADVSRPFGTTVAIKGDTAEINLKHGN*
Ga0150983_110859502	3300011120	Forest Soil	DNQNPYTNNLFLQTRGLPKLATGDQARYILERLADASRPFGTTVEVKGDTAEIKVKDGN*
Ga0150983_113361211	3300011120	Forest Soil	HTNNQFLDTRGLPKPATGERARIILDRLADSSRPFGTTVEVKGETAEIHLKGGN*
Ga0150983_114649052	3300011120	Forest Soil	QADTHDRHTNNLFLDTRGLPKFATGDQARYILERLADSSRPFGTKLVVKGDTATINLKGGN*
Ga0150983_147019572	3300011120	Forest Soil	PDLHDEHTNNLFLQTRGLPKLATGDQARYILQRLADASRPFGTKVLVKGDTAEINLKSGS
Ga0137392_108755801	3300011269	Vadose Zone Soil	TQDEHTNNLFLQTRGLPKLATGDQARYILQRLADSSRPFGTTVEVKADTAEIKLKGGN*
Ga0137388_110526331	3300012189	Vadose Zone Soil	GQPDTQDEHTNNLFLQTRGLPKLATGEQALYILQRLADASRPFGTTVAVKGDTAEIQLKRGN*
Ga0137388_114115241	3300012189	Vadose Zone Soil	IATRGLPKPAMGEQATYILKRLAELSRPFGTTVVVKGDTAEIDLKRGK*
Ga0137363_117369442	3300012202	Vadose Zone Soil	DEHTNNLFLQTRGLPSLATREQAHYILEKLAELSRPFRTTIVVKDDTAEIQLKSGN*
Ga0137362_115049881	3300012205	Vadose Zone Soil	TNNLFLDTRGLPKPATGNQARYILERLAYSSRPFGTTVEVKGDLAEISLKGRN*
Ga0137380_114938742	3300012206	Vadose Zone Soil	QTRGLPKLATGDQARYILQRLADSSRPFGTTVEVKGDTAEINLKGRS*
Ga0137381_113855002	3300012207	Vadose Zone Soil	PDLQDEHTNNLFLRTRGLPKPATGDQAGYILQRLADSSRPFGTRVEVKGDTAEINLKDGN
Ga0137377_105424322	3300012211	Vadose Zone Soil	DEHTNNLYLQTRGLPKLATGDQARYILQRLADSSGPFGTLVEVKGDTAEIKLKAGN*
Ga0150985_1211321913	3300012212	Avena Fatua Rhizosphere	HNGHTNNLFLGTRGLPTPATGERARYILERLADSSRPFGTTIDVKGDTAELRLRGQQ*
Ga0137384_100393531	3300012357	Vadose Zone Soil	DEHTNNLFLQTRGLPKLATGDQARYILQRLADSSRPFGTKVEVKGDTAEINLKGGN*
Ga0137397_104536401	3300012685	Vadose Zone Soil	QDEHTNNLYLQTRGLPKLATGDQARYILQRLADSSGPFGTIVEVKGDTAEIKLKAGN*
Ga0137396_104853361	3300012918	Vadose Zone Soil	FLQTRGLPKPATGDQAGYILQRLADSSRAFGTTVVVKGDTAEIDLKNGN*
Ga0137359_108547612	3300012923	Vadose Zone Soil	LFLQTRGLPKPATGDQAGYILQRLADSSRPFGTKVAVKGDTAEINLKEGN*
Ga0137419_111061201	3300012925	Vadose Zone Soil	EHTNNLYLQTRGLPKLATGDQARYILQRLADSSGPFGTTVEVKDDTAEIKLKAGN*
Ga0137419_115066732	3300012925	Vadose Zone Soil	DTQDEHTNNLYLQTRGLPKLATGDQARYILQRLADSSGPFGTTVEVKGDTAEIKLKAGN*
Ga0137419_119671812	3300012925	Vadose Zone Soil	EHTNNLYLQTRGLPKLATGDQARYILQRLADSSGPFGTTVEVKGDTAEIKLKAGN*
Ga0137407_123678031	3300012930	Vadose Zone Soil	QDEHTNNLYLQTRGLPKLATGDQAGYILQRLADSSRPFGTRVEVKGYTAEINLKDGN*
Ga0134110_104154871	3300012975	Grasslands Soil	NLFLQTRGLPRPATGDQAGYILQRLADSSRPFGTKVVVKGDTAEINLKEGN*
Ga0164307_106988202	3300012987	Soil	YANNLFLQTRGLPKLATGEQAHYILERLANLSKPFGTTMVVTGETAQIRLTNRN*
Ga0181534_107437562	3300014168	Bog	QDEHTNNLYLQTRGLPAPATGDQAHYILERLAELSRPCGTVVEVKGETAEIKLKGEN*
Ga0181531_107677651	3300014169	Bog	NLFLQTRGLPAPATGEQAHYILERLAALSRPFGTTVEVKADTAEIKLNGNKLHRPAQ*
Ga0182024_104706473	3300014501	Permafrost	DEHTNNLFLQTRGLPTPATGEQAHYILERLAGLSRPFGTTVEVKGDTAEIKLKGGN*
Ga0157379_104793922	3300014968	Switchgrass Rhizosphere	QDEFVNNLYLQTRGLPKPATGDQAHYILERLADLSRPFGTIVEAKGDTAAIKLEGLN*
Ga0132256_1004786063	3300015372	Arabidopsis Rhizosphere	LPTPATGERARYILERLAESSRPFGTTIEVKGDTAELRLGGRK*
Ga0182041_100988281	3300016294	Soil	TNNLFLQTRGLPTTATGEQARYILERLADLSRPFGTRVEVKGETAEIKLKGGN
Ga0182035_113949381	3300016341	Soil	PDVHDEHTNNLYLQTRGLPTPAAGDQAHYILERLADLSRPFGTNIEAIGDSAEIKLKVGN
Ga0182037_120052811	3300016404	Soil	LDNKIGQGQADTRGLPRPATGDQAHYILERLADLSRPFGTNIEAIGDSAEIKLKAGN
Ga0187806_12069642	3300017928	Freshwater Sediment	FLQTRGLPKPAEGEKGRYILERLADASKPFGTNMVVKGETAEIMLKGGN
Ga0187825_100797711	3300017930	Freshwater Sediment	NNLFLQTRGLPRAAEGEKARYILERLADASKPFGTNMVVKGETAEILLKSGN
Ga0187825_102574322	3300017930	Freshwater Sediment	QPDVHEEHTDNLLHQTRGLPKPATGDQGHYILERLADLSRPFGTAVVVDGDMAEIKLKSG
Ga0187775_103007441	3300017939	Tropical Peatland	IHTNNLFLQTRGWPAPAKGEQARYILERLTDLSRPFGTTIVVKGDTAEIQLEGGR
Ga0187847_106755192	3300017948	Peatland	FLQTRGLPTPATGEQARYILERLANLSRPFGTTVEVKGDTAEIKLKGGS
Ga0187817_100802294	3300017955	Freshwater Sediment	HDEHTNNLFLQTRGLPTPATGDQARYILERLADLSRPFGTTLVVNGDSAEVKLKGGS
Ga0187780_109256412	3300017973	Tropical Peatland	PAEVHDGHVNNLFLDTRGLPKAAKGDQARYILERFADSCRPFGTTLNIKGETAELVLSGK
Ga0187822_102468892	3300017994	Freshwater Sediment	LQTRGLPKPATGENARYILERLADDSKPFGTTIELKGDTARIALASGN
Ga0187891_12055981	3300017996	Peatland	TRGLPAPAEGEQATYILKRVAELSEPFGTKVAVKGDTAEIVLKGGK
Ga0187810_103680631	3300018012	Freshwater Sediment	TPDTQDEHTNNLFLETRGLPTLATGEKAGYILGRLADSSRPFGTRVEVKGDTAEVKLKGG
Ga0187885_102530172	3300018025	Peatland	VHEEHTDNLFLQTRGLPKPATGEQAHYILERLADLSRPFGTTVVVNGDMAEIKLKPAK
Ga0187857_103224811	3300018026	Peatland	NQFLNTRGLPAPAEGEQATYILKRVAELSESFGTTVDVKGDAAEIVLKGGK
Ga0187862_108834641	3300018040	Peatland	FIDTRGLPAPAEGEQATYILKRVAELSEPFGTTVDVKGDTAEIVLKGGK
Ga0182025_11174692	3300019786	Permafrost	PDTQDEHTNNLFLQTRGLPKPATGDQALYILQRLADASRPFGTTVAVKGDTAEIKLKRGN
Ga0210407_106087111	3300020579	Soil	TRGLPKLATGDQARYILERLADASRPFGTTVEVKGDTAEIKVKDGN
Ga0210401_108152071	3300020583	Soil	EPDLHDEHTNNLFLQTRGLPKLATGDQARYILQRLADASRPFGTKVLVKGDTAEINLKSG
Ga0210406_104258801	3300021168	Soil	QPDTQDAHANNLFLQTRGLPVPVKGEQARLILERLADLSRPFGTTVVVKDDTAEIKLKGR
Ga0210405_107849701	3300021171	Soil	GLPAPAKGEQATYILQRVAEYSRPFGTTVEVKGDTAEINVKDGN
Ga0210388_103808513	3300021181	Soil	LQTRGLPTPSTGDQARYILERLRDLSRPFGTTVEVKGDTAAIKLKSGN
Ga0210388_109931101	3300021181	Soil	VHEEHTDNLFLQTRGLPKPASGEQAHYILERLADLSRPFGTTVVVNGDMAEIKLKSGK
Ga0210393_105095471	3300021401	Soil	QGEPDVHDEHTNNLFLQTRGLPAPVAGEQARYILERLADLCRPFGTTLVIKGDGAEVKLKGGS
Ga0210386_101607433	3300021406	Soil	DTQNPYANNLYLQTRGLPKPATGEQARYILERLADASRPFGTTVEIKGEMAEIKLKK
Ga0210386_115500142	3300021406	Soil	PDVHEEHTDNLFLQTRGLPKLATGEQAHYILERLAELSRPFGTTVVVNGDMAEIKLKSGK
Ga0210384_102985823	3300021432	Soil	TRGLPTPAKGEQARYILERLANLSRPFGTTVVVKDDTAEIKLKAGN
Ga0210391_115277491	3300021433	Soil	QGQSDTQNPYANNLYLQTRGLPKPATGEQARYILERLADASRPFGTNVEIKGETAEIKLKSGN
Ga0187846_100569081	3300021476	Biofilm	LFLDTRGLPKPATGDQARYILERLADLSRPFGTTVAVKGDTAEIKLKVGN
Ga0210409_104837291	3300021559	Soil	NNLFLQTRGLPKLATGDQARYILQRLADASRPFGTKVLVKGDTAEINLKSGS
Ga0242660_10287911	3300022531	Soil	RGLPTPATGEQARYILERLADLSRPFGTTIVVKNDTAEIKLKGGK
Ga0242662_102694182	3300022533	Soil	DEHTNNLFLQTRGLPKLATGDQARYILQRLADASRPFGTKVSVKGDTAEINLKSGS
Ga0242657_10346451	3300022722	Soil	RGLPKPATGEQARYILERLAESSRPFGTLVEVKGETAEINLKTEK
Ga0208455_11025241	3300025453	Peatland	LNTRGLPAPAEGEQATYILKRVAELSEPFGTTVAVKEDTAEIVLKGGK
Ga0207707_102053823	3300025912	Corn Rhizosphere	RGLPKPAAGDQARYILERLADLCKPFGTNVAITGDTAEIKLTASK
Ga0207694_103637621	3300025924	Corn Rhizosphere	KIGDGQPDVHDEHTDNLFRQTRGLPRLATGEQAHYILERLADLSRPFGTAVVVNGDMAEIKLNPGK
Ga0207665_107233721	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LQTRGLPTPATDEQAHYILERLADASRPFGTTVVVKGDTAEIKLKGGS
Ga0207679_116978361	3300025945	Corn Rhizosphere	HDEHTDNLFRQTRGLPRLATGEQAHYILERLADLSRPFGTAVVVNGDMAEIKLNPGK
Ga0209267_11476072	3300026331	Soil	LQTRGLPKPATGDQARYILERLADASRPFGTKLEVKGDTAEINLRGRS
Ga0209159_10598091	3300026343	Soil	LFLQTRGLPKPATGDQAGYILQRLADSSRPFGTNVVVKADVAEIDLKNGN
Ga0257172_10613261	3300026482	Soil	TNNLYLQTRGLPKLATGDQARYILQRLADSSGPFGTLVEVKGDTAEIKLKAGN
Ga0209160_12054071	3300026532	Soil	EPDLHDEHTNNLFLQTRGLPKLATGDQARYILQRLADSSRPFGTTVEVKADTAEIKLKGG
Ga0209076_10384112	3300027643	Vadose Zone Soil	GQPDTQDEHTNNLYLQTRGLPKLATGDQARYILQRLADSSGPFGTLVEVKGDTAQIKLKAGN
Ga0209167_101624331	3300027867	Surface Soil	GQSDTHDPYANNLFLQTRGLPKPATGDQAHYILERLADSSRPFGTSVEIKGETAEIKLKSGN
Ga0209380_101177323	3300027889	Soil	EHTNNLFLQTRGLPKLATGDQARYILQRLADASRPFGTKVLVKGDTAEINLKSGS
Ga0209488_105013431	3300027903	Vadose Zone Soil	FLQTRGLPKPATGEQAHYILERLANLSRPFGTTIVAKGDTAEIKFTSGN
Ga0209415_101629581	3300027905	Peatlands Soil	EHTDNLFLQTRGLPKPATGEQAHFILERLADLSRPFGTTVVVNGDMAEIKLKSGK
Ga0209006_113199471	3300027908	Forest Soil	PDVRDEHTNNLFLQTRGLPALATGDQARFILERLADLSRPFGTTVVVKGEAAEIRLKGGN
Ga0209168_102204231	3300027986	Surface Soil	LQTRGLPKPATGDQARYILERLADVSRPFGTTVAIKGDTAEIQLKHGN
Ga0137415_103951101	3300028536	Vadose Zone Soil	YLQTRGLPKLATGDQARYILERLADSSRPFGTIVEVNGDTAEIVLKGGK
Ga0308309_103441802	3300028906	Soil	GQPDVHEEHTDNLFLQTRGLPKPATGEQAHYILERLADLSRPFGTTVVVNGDMAEIKLKPGR
Ga0222749_105209681	3300029636	Soil	DASTNNLFLQTRGLPKPATGNQARYILERLATASRPFGTTIAITGETATIRLR
Ga0302182_102431111	3300030054	Palsa	QTRGLPTPATGEQAHYILERLANLSRPFGTTVEVKGDTAEIQLKGGN
Ga0316363_101847691	3300030659	Peatlands Soil	DEHTNNLFLQTRGLPTPATGDQAHYILERLADLSRPFGTTVVVKGDTAEIKLRGGK
Ga0307495_101406482	3300031199	Soil	DPYANNLFLQTRGLPKLATGEQAHYILERLANASKPFGTTIVVTGETAQIRLTNR
Ga0170824_1104169552	3300031231	Forest Soil	HEEHTDNLFLQTRGLPKPATGEQAHYILERLADLSRPFGTTVVVNGDMAEIKLKSGQ
Ga0170824_1105714631	3300031231	Forest Soil	DNLFLQTRGLPKLATGEQAHYILERLADLSRPFGTTIVVNGDMAEIKLKSGK
Ga0170824_1202338423	3300031231	Forest Soil	QTRGIPTPATGEKARYILERLADLSRPFGTAMEIKGDRAEIRLNASN
Ga0302324_1008149911	3300031236	Palsa	QDEHDNNLFLQTRGLPKPATGDQARYILQRLSDSSKPFGTTVEVEGATAKIKLQGGG
Ga0302320_121319441	3300031524	Bog	TEDEHTNNLFLQTRGLPTPATGEQAHYILERLASLSRPFGTTVVLKGDTAAIELKARN
Ga0310686_1094187721	3300031708	Soil	NNQFLATRGLPTPATGEKARYILDRLANSCRPFGTAIQVKGDVAEIRLN
Ga0265342_104712091	3300031712	Rhizosphere	DEHTDNLFLQTRGLPKPATGEQAHYILDRLAELSRPFGTTIVVKGDTAEIKLKPGK
Ga0307476_102794222	3300031715	Hardwood Forest Soil	HEEHTDNLFLQTRGLPKPATGEQAHYILERLAELSRPFGTTVVVNGDMAEIKLKSGK
Ga0307469_110023251	3300031720	Hardwood Forest Soil	ANNLFLQTRGLPNLATGEQAHYILERLTNLSKPFGTTIVVTGETAQIQLTQR
Ga0307469_110219372	3300031720	Hardwood Forest Soil	DLHDEHTNNLFLQTRGLPKPVTGDQAGYILQRLADASRPFKTTVVVRGDMAEINLKAGN
Ga0307477_106960051	3300031753	Hardwood Forest Soil	FLQTRGLPKVATGDQARYILQRLADSSRPFGTTVEIKGDMAEIKLKGAS
Ga0318568_107018502	3300031819	Soil	GKPDTHDEHTNNLFLQTRGLPTPATGEQAHYILERLADLSRPFGTRVEVKGETAEIKLKGGH
Ga0307478_1001647610	3300031823	Hardwood Forest Soil	GEPDLHDEHTNNLFLQTRGLPKLATGDKARYILQRLADASRPFGTKVLVKGDTAEINLKSGS
Ga0307478_117512291	3300031823	Hardwood Forest Soil	PDLHDEHTNNLFLQTRGLPKLATGDQARYILQRLADASRPFGTKVLVKGETAEINLKSGS
Ga0306926_109915701	3300031954	Soil	NNLFLQTRGLPTPATGEQAHYILERLADLSRPFGTRVEVKGETAEIKLKGGN
Ga0318577_106101311	3300032091	Soil	HANNLFLQTRGLPAPATGEQAQYILERLADLSRPFGTTVEVSGETAEIKLKSGT
Ga0311301_104001353	3300032160	Peatlands Soil	GQGEPDTQDEHTNNLFLQTRGLPKPATGDQARYILERLADVSRPFGTTVAIKGDTAEINLKHGN
Ga0307470_118536771	3300032174	Hardwood Forest Soil	IGQGQPDLHDEHTNNLFLQTRGLPTPATGDKAGYILQRLADFSRPFGTTVVVKGDTAEISLKAAN
Ga0307471_1035473751	3300032180	Hardwood Forest Soil	IGQGEPDTQDEHTNNLFLQTRGLPKPVTGDQAGYILQRLEDASRPFGTKVEVKGDMAEINLKGKT
Ga0307472_1010503782	3300032205	Hardwood Forest Soil	LQTRGLPTPATGEQARYILERLADLSRPFGTTVEVKGDTAEIKLKGGY
Ga0307472_1014310641	3300032205	Hardwood Forest Soil	GQGQPDTQDEHTNNLFLQTRGLPKLATGEQALYILQRLADVSRPFGTTVAVKGETAEIKLKSGN
Ga0335079_111390442	3300032783	Soil	THDEHTNNLFLQTRGLPKPATGDQARYILERLANVSRPFGTTVAIKGETAEINLKHEN
Ga0335078_103034161	3300032805	Soil	DNNLFMKTRGLPAPATGEQAHYILERLADLSRPFGTTLVINGDSAEIKLKAGK
Ga0335081_108463973	3300032892	Soil	KIGQGDPDVHDEHTNNLFLQTRGLPAPATGEQAHYILERLADLSRPFGTAVVVKGDSAEIKLKSGS
Ga0335069_106801531	3300032893	Soil	TNNLFLQTRGLPRPAAGNQARYILERLANLSRPFGTTVAISGDAATLQLKQGSTDTL
Ga0335069_121154102	3300032893	Soil	VHEEHTDNLFLETRGLPKPVTGEQAHYILSRLADLSRPFGTNVAINGDMAEIKLGK
Ga0335083_102156161	3300032954	Soil	LQTRGLPKPATGDQARYILERLADVSRPFGTTVAIKGDTAEINLRHGN
Ga0335083_111564601	3300032954	Soil	GLPKPARGKQARYILERLADTSRPFGTTVRVKGETAYIDLKAGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050640

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences