Metagenome / Metatranscriptome Family F050638

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050638
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	62 residues
Representative Sequence	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMVERAK
Number of Associated Samples	94
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	54.17 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	85.52 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.345 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.759 % of family members)
Environment Ontology (ENVO)	Unclassified (44.138 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.517 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 75.41% β-sheet: 0.00% Coil/Unstructured: 24.59%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF04392	ABC_sub_bind	8.97
PF01381	HTH_3	4.83
PF03401	TctC	2.07
PF00239	Resolvase	2.07
PF01425	Amidase	1.38
PF03480	DctP	0.69
PF01042	Ribonuc_L-PSP	0.69
PF07859	Abhydrolase_3	0.69
PF07040	DUF1326	0.69
PF01566	Nramp	0.69
PF05598	DUF772	0.69
PF14023	DUF4239	0.69
PF10282	Lactonase	0.69
PF13384	HTH_23	0.69
PF00496	SBP_bac_5	0.69
PF13676	TIR_2	0.69
PF01588	tRNA_bind	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	8.97
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.07
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.07
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.07
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.38
COG0073	tRNA-binding EMAP/Myf domain	Translation, ribosomal structure and biogenesis [J]	0.69
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.69
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.69
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.69
COG2517	Predicted RNA-binding protein, contains C-terminal EMAP domain	General function prediction only [R]	0.69
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
All Organisms	root	All Organisms	49.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
cellular organisms	root	All Organisms → cellular organisms	49.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.90 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.83 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.45 %
Sphingopyxis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.90 %
Sphingopyxis macrogoltabida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	1.38 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.90 %
Sphingopyxis macrogoltabida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	1.38 %
Bradyrhizobium sp. AT1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	0.69 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig511278	Not Available	1068	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1047430	Not Available	625	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10013627	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10041324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1219	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1018186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1333	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1039649	Not Available	663	Open in IMG/M
3300004633\|Ga0066395_10929910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300004633\|Ga0066395_10945369	Not Available	523	Open in IMG/M
3300005147\|Ga0066821_1012228	Not Available	640	Open in IMG/M
3300005165\|Ga0066869_10026800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300005332\|Ga0066388_100245992	All Organisms → cellular organisms → Bacteria	2426	Open in IMG/M
3300005332\|Ga0066388_100829361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1513	Open in IMG/M
3300005332\|Ga0066388_101820060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300005332\|Ga0066388_101971573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300005332\|Ga0066388_102678304	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005332\|Ga0066388_103076183	Not Available	852	Open in IMG/M
3300005332\|Ga0066388_103412598	Not Available	811	Open in IMG/M
3300005332\|Ga0066388_105471624	Not Available	643	Open in IMG/M
3300005332\|Ga0066388_106433187	Not Available	592	Open in IMG/M
3300005363\|Ga0008090_15839516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	887	Open in IMG/M
3300005435\|Ga0070714_101893490	Not Available	582	Open in IMG/M
3300005436\|Ga0070713_100847291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	878	Open in IMG/M
3300005437\|Ga0070710_10122002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1579	Open in IMG/M
3300005445\|Ga0070708_100061445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3356	Open in IMG/M
3300005471\|Ga0070698_100441018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300005713\|Ga0066905_100494650	Not Available	1015	Open in IMG/M
3300005713\|Ga0066905_100868040	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300005713\|Ga0066905_102264601	Not Available	507	Open in IMG/M
3300005764\|Ga0066903_100443054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2165	Open in IMG/M
3300005764\|Ga0066903_100811598	Not Available	1675	Open in IMG/M
3300005764\|Ga0066903_101021653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1514	Open in IMG/M
3300005764\|Ga0066903_101608829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1232	Open in IMG/M
3300005764\|Ga0066903_102140930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1077	Open in IMG/M
3300005764\|Ga0066903_103412249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	857	Open in IMG/M
3300006028\|Ga0070717_10217513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1678	Open in IMG/M
3300006058\|Ga0075432_10271399	Not Available	695	Open in IMG/M
3300006172\|Ga0075018_10212125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300006173\|Ga0070716_100908824	Not Available	690	Open in IMG/M
3300006755\|Ga0079222_11804364	Not Available	592	Open in IMG/M
3300006806\|Ga0079220_10934621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300006844\|Ga0075428_100336629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1621	Open in IMG/M
3300006854\|Ga0075425_101311609	Not Available	820	Open in IMG/M
3300006904\|Ga0075424_102519976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	538	Open in IMG/M
3300010043\|Ga0126380_10481738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	947	Open in IMG/M
3300010046\|Ga0126384_10160150	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300010046\|Ga0126384_12305495	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300010047\|Ga0126382_11203156	Not Available	679	Open in IMG/M
3300010048\|Ga0126373_11790547	Not Available	678	Open in IMG/M
3300010048\|Ga0126373_11823057	Not Available	672	Open in IMG/M
3300010358\|Ga0126370_10433029	Not Available	1091	Open in IMG/M
3300010359\|Ga0126376_10632258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1018	Open in IMG/M
3300010360\|Ga0126372_10154383	Not Available	1840	Open in IMG/M
3300010360\|Ga0126372_12699522	Not Available	548	Open in IMG/M
3300010360\|Ga0126372_12843020	Not Available	536	Open in IMG/M
3300010361\|Ga0126378_10690220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1133	Open in IMG/M
3300010361\|Ga0126378_11729820	Not Available	711	Open in IMG/M
3300010361\|Ga0126378_12700612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300010361\|Ga0126378_12924863	Not Available	545	Open in IMG/M
3300010362\|Ga0126377_11606162	Not Available	725	Open in IMG/M
3300010362\|Ga0126377_12680007	Not Available	573	Open in IMG/M
3300010366\|Ga0126379_11226865	Not Available	856	Open in IMG/M
3300010366\|Ga0126379_13387903	Not Available	534	Open in IMG/M
3300010376\|Ga0126381_100688761	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300010376\|Ga0126381_102754739	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300010396\|Ga0134126_12419985	Not Available	571	Open in IMG/M
3300010398\|Ga0126383_10588531	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300010398\|Ga0126383_10842883	Not Available	1001	Open in IMG/M
3300010398\|Ga0126383_11245818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300010398\|Ga0126383_12650593	Not Available	584	Open in IMG/M
3300010398\|Ga0126383_13094000	Not Available	543	Open in IMG/M
3300010863\|Ga0124850_1004117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4464	Open in IMG/M
3300012209\|Ga0137379_10064745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3518	Open in IMG/M
3300012210\|Ga0137378_10159081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2095	Open in IMG/M
3300012210\|Ga0137378_10662142	Not Available	955	Open in IMG/M
3300012210\|Ga0137378_11734060	Not Available	530	Open in IMG/M
3300012354\|Ga0137366_10266216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1268	Open in IMG/M
3300012359\|Ga0137385_10086604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2781	Open in IMG/M
3300012957\|Ga0164303_11370768	Not Available	527	Open in IMG/M
3300012957\|Ga0164303_11548922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300012958\|Ga0164299_10819521	Not Available	666	Open in IMG/M
3300012961\|Ga0164302_10557569	Not Available	822	Open in IMG/M
3300012961\|Ga0164302_11485807	Not Available	558	Open in IMG/M
3300012971\|Ga0126369_11692708	Not Available	722	Open in IMG/M
3300012971\|Ga0126369_12969235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300012971\|Ga0126369_13126732	Not Available	542	Open in IMG/M
3300012986\|Ga0164304_11886121	Not Available	500	Open in IMG/M
3300015372\|Ga0132256_101088697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300016319\|Ga0182033_10184835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1644	Open in IMG/M
3300016319\|Ga0182033_11560642	Not Available	597	Open in IMG/M
3300016341\|Ga0182035_10506403	Not Available	1032	Open in IMG/M
3300016357\|Ga0182032_10011375	All Organisms → cellular organisms → Bacteria	4827	Open in IMG/M
3300016357\|Ga0182032_11155091	Not Available	665	Open in IMG/M
3300016387\|Ga0182040_10744254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300016387\|Ga0182040_11580945	Not Available	558	Open in IMG/M
3300016422\|Ga0182039_11793230	Not Available	562	Open in IMG/M
3300020579\|Ga0210407_10675598	Not Available	802	Open in IMG/M
3300020581\|Ga0210399_10368510	Not Available	1199	Open in IMG/M
3300021170\|Ga0210400_10592092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M
3300021178\|Ga0210408_10151734	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300021178\|Ga0210408_10493693	Not Available	973	Open in IMG/M
3300021361\|Ga0213872_10054301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	1817	Open in IMG/M
3300021444\|Ga0213878_10125853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1053	Open in IMG/M
3300021478\|Ga0210402_11023692	Not Available	753	Open in IMG/M
3300021560\|Ga0126371_10155983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2349	Open in IMG/M
3300021560\|Ga0126371_11873885	Not Available	719	Open in IMG/M
3300021560\|Ga0126371_12802310	Not Available	591	Open in IMG/M
3300025885\|Ga0207653_10081441	Not Available	1121	Open in IMG/M
3300025910\|Ga0207684_10082737	All Organisms → cellular organisms → Bacteria	2734	Open in IMG/M
3300025929\|Ga0207664_11953828	Not Available	509	Open in IMG/M
3300027288\|Ga0208525_1016155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300027654\|Ga0209799_1012194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1853	Open in IMG/M
3300029636\|Ga0222749_10515909	Not Available	648	Open in IMG/M
3300031543\|Ga0318516_10051565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2240	Open in IMG/M
3300031544\|Ga0318534_10192753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1177	Open in IMG/M
3300031544\|Ga0318534_10513203	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300031545\|Ga0318541_10039479	All Organisms → cellular organisms → Bacteria	2383	Open in IMG/M
3300031545\|Ga0318541_10126260	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300031573\|Ga0310915_10378589	Not Available	1004	Open in IMG/M
3300031573\|Ga0310915_10674440	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031668\|Ga0318542_10288971	Not Available	838	Open in IMG/M
3300031719\|Ga0306917_10193128	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300031736\|Ga0318501_10032713	Not Available	2315	Open in IMG/M
3300031744\|Ga0306918_10101235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2051	Open in IMG/M
3300031765\|Ga0318554_10661412	Not Available	587	Open in IMG/M
3300031777\|Ga0318543_10006140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3964	Open in IMG/M
3300031777\|Ga0318543_10050264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1698	Open in IMG/M
3300031792\|Ga0318529_10145358	Not Available	1089	Open in IMG/M
3300031797\|Ga0318550_10306184	Not Available	771	Open in IMG/M
3300031831\|Ga0318564_10405012	Not Available	597	Open in IMG/M
3300031890\|Ga0306925_10486667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1315	Open in IMG/M
3300031910\|Ga0306923_10290590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1868	Open in IMG/M
3300031910\|Ga0306923_10432070	Not Available	1496	Open in IMG/M
3300031941\|Ga0310912_10074365	All Organisms → cellular organisms → Bacteria	2453	Open in IMG/M
3300032035\|Ga0310911_10297053	Not Available	929	Open in IMG/M
3300032054\|Ga0318570_10597745	Not Available	503	Open in IMG/M
3300032059\|Ga0318533_10192474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1458	Open in IMG/M
3300032066\|Ga0318514_10412824	Not Available	717	Open in IMG/M
3300032076\|Ga0306924_11162509	Not Available	837	Open in IMG/M
3300032090\|Ga0318518_10605218	Not Available	559	Open in IMG/M
3300032094\|Ga0318540_10001109	All Organisms → cellular organisms → Bacteria → Proteobacteria	8469	Open in IMG/M
3300033289\|Ga0310914_10144458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2093	Open in IMG/M
3300033289\|Ga0310914_10960889	Not Available	754	Open in IMG/M
3300033290\|Ga0318519_10035509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2393	Open in IMG/M
3300033290\|Ga0318519_10850761	Not Available	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.86%
Host-Associated	Host-Associated	4.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.17%
Plants	Host-Associated → Plants	4.14%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.14%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.10%
Loam	Environmental → Terrestrial → Soil → Loam	22.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.69%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_03138130	2124908045	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRR
AP72_2010_repI_A01DRAFT_10474302	3300000579	Forest Soil	VPISNTSGIAMHRAKKHPKLSADERAFLNQLDCLNEEETKQLTTREIFAYFKIIDKVESRADVRRMVERAK*
AF_2010_repII_A1DRAFT_100136273	3300000597	Forest Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIVDKVDSRADVRRMVERAR*
AF_2010_repII_A1DRAFT_100413244	3300000597	Forest Soil	MHRAKKHPKLSADERAFLNQLDCLNEEETKQLTTREIFAYFKIIDKVESRADLRRMVERAK*
AF_2010_repII_A100DRAFT_10181861	3300000655	Forest Soil	ISNTSRIAMHRAKKHPKLSADERAFLNQLDCLNEEETKQLTTREIFAYFKIIDKVESRADVRRMVERAK*
AP72_2010_repI_A100DRAFT_10396491	3300000837	Forest Soil	GIAMPRAKKHSKLSDGRAFHNRLDCLNEDEIKQLTTEIFAYFKIIDNVDSRADVRRMVERSE
Ga0066395_109299101	3300004633	Tropical Forest Soil	MFRIVMPRAKKHPKLSADERAFFNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWRNARSE*
Ga0066395_109453691	3300004633	Tropical Forest Soil	MPRAKKPPQLSAKERAFLNRLDRLSEEEIKRLTTREIFAYFKLIDRVDSRTDIRRMVERAKWRHK*
Ga0066821_10122282	3300005147	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSSADVRRMVERAK*
Ga0066869_100268002	3300005165	Soil	MPRPKKHPKLFADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMVERAR*
Ga0066388_1002459923	3300005332	Tropical Forest Soil	MPRAKKHPKLSVDERAFLNRLDCLNEEEIKQLTTREIFAYIKIIDKVDSRADVRRMVERAK*
Ga0066388_1008293611	3300005332	Tropical Forest Soil	MFRIAIPRAKKHPKLSPDERAFLNRLDHLNEEKIKQFTTREIFAYFKIIDKVDSRADIRQWWNAQSE*
Ga0066388_1018200602	3300005332	Tropical Forest Soil	MFRIAMPRAKKHPKLSPDERAFLNRLDRLNEEKIKQVTTREIFAYFKIIDKVDSRADVRQWWNAQSE*
Ga0066388_1019715732	3300005332	Tropical Forest Soil	MPRAKKPSQLSAKERALLNRLDRLSEEEIKRRLTTREIFAYFKLIDRVDSRTDIRRMVERAKLRHK*
Ga0066388_1026783042	3300005332	Tropical Forest Soil	VPRAKKHPKLSADERAFFNRLDCLNEEEIKQLTTREIFAYFKLIDKVDSSADVPRMVERAK*
Ga0066388_1030761831	3300005332	Tropical Forest Soil	MFRIAMPRAKKHPKLSSDERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE*
Ga0066388_1034125982	3300005332	Tropical Forest Soil	MFRIAMPHAKKHPKLSPDERAFVNRFDRLNEEKIKQFTTREIFAYFKIIDKVDSRANVRQWWNAQSE*
Ga0066388_1054716241	3300005332	Tropical Forest Soil	MPRAKKHPKLSADERAFLKRLDCLNEEEIKQLTTREIFAYFKLIDKADSSADVRR
Ga0066388_1064331872	3300005332	Tropical Forest Soil	MHRAKKHPKLSADERAFLNQLDCLNEEETKQLTTREIFAYFKIIDKVESRADVRRMVERAK*
Ga0008090_158395161	3300005363	Tropical Rainforest Soil	FAAGALSETSGIAMPRAKKHPKLSADERALLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRRMVERVI*
Ga0070714_1018934902	3300005435	Agricultural Soil	AMPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDNVDSSADVRRMVERAK*
Ga0070713_1008472912	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDKVDSSADVRRMVERAK*
Ga0070710_101220024	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPRANPKLSADEREFLNRLDCLNEEEIKQLTTRELFAYFKVIDKVDSRADARRIVQRAR*
Ga0070708_1000614453	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDNVDSSADVRRMVERAK*
Ga0070698_1004410182	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPRPKKHPKLFADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKADSRADVRRMVERAR*
Ga0066905_1004946502	3300005713	Tropical Forest Soil	MPRAKKPPQLSAKERALLNRLDRLSEEEIKRLTTREIFAYFKLIDRVDSRTDIRRMVERAKWRHK*
Ga0066905_1008680401	3300005713	Tropical Forest Soil	VGGDKALSETSGIAMPRAKKHPKLSADERAFLNRLDCLNGEEIKQLTTREIFAYFKIIDTVDSRADVRRMMERAK*
Ga0066905_1022646012	3300005713	Tropical Forest Soil	VATKHYPKQVEFAMPRARKHPKLSTDERAFLNRLDCLNEEEMEIFAYFKIIDQDHRKVDSRADLRRMMERTK*
Ga0066903_1004430545	3300005764	Tropical Forest Soil	MPRAQKHPKLSADERAFHNRLDCLNEEAIKQHTTREIFAYFKIIDKVDSRGDVRGMVERVF*
Ga0066903_1008115983	3300005764	Tropical Forest Soil	MLRAKKHPKLSADERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRRMVERAK*
Ga0066903_1010216534	3300005764	Tropical Forest Soil	MPRAKKHPKLSADEWAFFNRLDCLNEEEIKQLTTREIFAYFRVIDKVDSRADVRRMVQRAK*
Ga0066903_1016088293	3300005764	Tropical Forest Soil	MPRARKSPKLSTDERTFLHRLDCLNEEEIKQLTTREIFAYFKIIDQDHRNVDSRADLRRMMETHEVKVR*
Ga0066903_1021409302	3300005764	Tropical Forest Soil	MPRAKKHPKLSADEWAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSKADVRRIVERAK*
Ga0066903_1034122492	3300005764	Tropical Forest Soil	TSEIAMPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDKVDSSADVRRVVERAK*
Ga0070717_102175134	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPHAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDNVDSSADVRRMVERAK*
Ga0075432_102713992	3300006058	Populus Rhizosphere	MPRANPKLSADEREFLNRLDCLNEEEIKQLTTRELFAYFKVIDKVDSRADARRIVERAR*
Ga0075018_102121252	3300006172	Watersheds	MPRPKKHPKLFADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMVERARGE*
Ga0070716_1009088242	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSSTDVRRMVERA
Ga0079222_118043641	3300006755	Agricultural Soil	HGNPKPSADERTFLNRLDCLNEEEIKQLTTRELFAYFRVIDNVDSRTDARPMVERTRSPGA*
Ga0079220_109346212	3300006806	Agricultural Soil	MPRANQKLSADERAFLNRLDYLHEEEIKQLTTRELFAYFKVIDKVDSRADARRIVERAR*
Ga0075428_1003366291	3300006844	Populus Rhizosphere	MPRANPKLSADEREFLNRLDCLNEEEIKQLTTRELFAYFKVIDKVDSRADARRI
Ga0075425_1013116091	3300006854	Populus Rhizosphere	MPRANPKLPVDERAFLNRLDCLNEEEIKQLTTRELFAYFKVVDKVDYSPRARGGSD*
Ga0075424_1025199762	3300006904	Populus Rhizosphere	SADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMVERASR*
Ga0126380_104817382	3300010043	Tropical Forest Soil	MFRIAMPRAKKHPKLSSDERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWRNARSE*
Ga0126384_101601503	3300010046	Tropical Forest Soil	MPRAKKHPKLCVDERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRTDVPRMVEWEK*
Ga0126384_123054952	3300010046	Tropical Forest Soil	MPRAKKPSQLSAKERELLNRVDRLSEEEIKRRLTTREIFAYFKLIDRVDFRTDIRRMVERAKLRHK*
Ga0126382_112031561	3300010047	Tropical Forest Soil	MFRIAMPRAKKHPKLSSDERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQMVERAK*
Ga0126373_117905471	3300010048	Tropical Forest Soil	MPRAKKPPQLSAKERALLNRLDRLSEEEIKQLTTREIFAYFKLIDRVDSRTDIRRMVERAKWRHK*
Ga0126373_118230572	3300010048	Tropical Forest Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKVIDKVDSSADVRRTVERAK*
Ga0126370_104330292	3300010358	Tropical Forest Soil	MPRANKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDKVDSSADVRRTVERAK*
Ga0126376_106322583	3300010359	Tropical Forest Soil	GIAMPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTRAIFAYFKIIDKVDSRADVRRTVERVI*
Ga0126372_101543832	3300010360	Tropical Forest Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDKVDSSADVRRTVERAK*
Ga0126372_126995221	3300010360	Tropical Forest Soil	MFRIVMPRAKKHPKLSADERAFFNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRRMVERVI*
Ga0126372_128430201	3300010360	Tropical Forest Soil	MPRKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDKVDSSADVRR
Ga0126378_106902201	3300010361	Tropical Forest Soil	AHERAFLNQLDCLNEEETKQLTTREIFAYFKIIDKVESRADVRRMVERAK*
Ga0126378_117298202	3300010361	Tropical Forest Soil	ADFAAGALSETSGIAMPRAKRHPKLSADERAFFNRLDRLNDEKIKQFTTREIFAYFKIIDKVDSRADVRQWRNARSE*
Ga0126378_127006121	3300010361	Tropical Forest Soil	MPRAKRHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRM
Ga0126378_129248632	3300010361	Tropical Forest Soil	MFRIAMPRAKKHPKLSSDERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDTRADVR
Ga0126377_116061622	3300010362	Tropical Forest Soil	MHRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMMERAK*
Ga0126377_126800071	3300010362	Tropical Forest Soil	MFRIVMRRAKKHPKLSSDERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE*
Ga0126379_112268652	3300010366	Tropical Forest Soil	MFRIVMPRAKKHPKLSADERAFFNRLDRLNDEKIKQFTTREIFAYFKIIDKVDSRADVRQWRNARSE*
Ga0126379_133879032	3300010366	Tropical Forest Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFDYFKIIDKVDSRADVRRMVEREK*
Ga0126381_1006887611	3300010376	Tropical Forest Soil	KKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIVDKVDSRADVRRMVERAR*
Ga0126381_1027547392	3300010376	Tropical Forest Soil	MPRANKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRR
Ga0134126_124199852	3300010396	Terrestrial Soil	PRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFNLIDNVDSSADVRRMVERAK
Ga0126383_105885312	3300010398	Tropical Forest Soil	VPRAKKHPKLSADERAFFNRLDCLNEEEIKQLTTREIFAYFKLIDKVDSSADVRRTVERAK*
Ga0126383_108428832	3300010398	Tropical Forest Soil	MPRAKKPSQLSAKERALLNRLDRLSEEEIKRRLTTREIFAYFKLIDRVDFRTDIRRMVERAKLRHK*
Ga0126383_112458182	3300010398	Tropical Forest Soil	MPPAQKHPKLSANERAFLNRLDCLNEEEIKQHTTRKIFAYFKIIDKVDSRPDVRRMVERAK*
Ga0126383_126505932	3300010398	Tropical Forest Soil	MPRAKKHPKLSADERAFLNRLDSLNGEEIKQLTAREIFAYFKIFDKVDSR
Ga0126383_130940001	3300010398	Tropical Forest Soil	MFRIAMPRAKKHPKLSSDERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRAD
Ga0124850_10041175	3300010863	Tropical Forest Soil	MFRIAMPRAKKHPKLAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE*
Ga0137379_100647458	3300012209	Vadose Zone Soil	MPRAKKHPKLPADERAFLNRLDCLNEDEIKQLTTWEIFAYFKIIDKVDSRADVRRMVERAK*
Ga0137378_101590812	3300012210	Vadose Zone Soil	MHRAKKHPKLSADERAFLNQLDCLNEEEIKQLTTREIFAYFKIIDKVESRADVGG*
Ga0137378_106621422	3300012210	Vadose Zone Soil	ADFAAGALSKTSGIAMHRAKKHPKLSADERAFLNRLDCFNEEEIKQLTTREIFAYFKIIAKVESRADVRRMVERAK*
Ga0137378_117340602	3300012210	Vadose Zone Soil	AGALSKTSGIAMHRAKKHPKLSADERALDCLNEEEIKQFTTREIFAYFKIIDKVVSRVDVRRQLRP*
Ga0137366_102662163	3300012354	Vadose Zone Soil	MHRAKKHPKLSADERAFLNQLDCLNEEEIKQLTTREIFAYFKIIDKVESRAD
Ga0137385_100866041	3300012359	Vadose Zone Soil	MHRAKKHPRLSADERAFLNQLDCLNEEEIKQLTTREIFAYFKIIDKADSRADVRRMVERAR*
Ga0164303_113707682	3300012957	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRTMVERAN*
Ga0164303_115489221	3300012957	Soil	MPRPKKHPKLFADERAFLNRLDCLNEEEIKQLTTRELFTYFKVIDKVDSRADAR
Ga0164299_108195212	3300012958	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLPTREIFAYFKLIDKVDSSADVRRMVERAK*
Ga0164302_105575692	3300012961	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDKVESSA
Ga0164302_114858071	3300012961	Soil	MPRATKHPKLSADERAFFNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSSTDVRRMVERASESTSRAAR*
Ga0126369_116927081	3300012971	Tropical Forest Soil	KHPKLSVDERAFLNRLDCLNEEEIKQLTTREIFAYIKIIDKVDSRADVRRMVERAK*
Ga0126369_121809032	3300012971	Tropical Forest Soil	LLADFAERALSETSGIAMPRAQKHPKLSADERAFHNRLDCLNEEAIKQHTTREIFAYFKIIDKVDSRGDVRGMVERVF*
Ga0126369_129692352	3300012971	Tropical Forest Soil	VSCAQKHPKPSADERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWRNARSE*
Ga0126369_131267321	3300012971	Tropical Forest Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDKVDSSADVRRV
Ga0164304_118861211	3300012986	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMVERAK*
Ga0132256_1010886972	3300015372	Arabidopsis Rhizosphere	MPRANPKLSADEWAFLNRLDCLNEEATQELFAYFKVIDKVDSRADARRIVERAR*
Ga0182033_101848353	3300016319	Soil	MPRAKKHPKLSEDERAFLNRLDCSNEEEIKQLTTREIFAYFKIIDQDHREVVSRADVRRMMERAK
Ga0182033_115606421	3300016319	Soil	MPRAKMHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMMERA
Ga0182035_105064032	3300016341	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLATREIFAYFKIIDKVDSRADVRRMVERV
Ga0182032_100113755	3300016357	Soil	MPRAKKHPKLSEDERAFLNRLDCLNAEEIKQLTTREIFAYFKIIDQDHREVVSRADVRRMMERAK
Ga0182032_111550911	3300016357	Soil	RAKKHPKLSADERAFLNRLDCLNEEEIKQLATREIFAYFKIIDKVDSRADVRRMVERVI
Ga0182040_107442543	3300016387	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEKIKQLTTREIFAYFNIIDKVDSRADVRRMVERV
Ga0182040_115809451	3300016387	Soil	MPRAKKPPQLSAKERALLNRLDRLSEEEIKRLTTREIFAYFKLIDREVDSRADIRR
Ga0182039_117932302	3300016422	Soil	RAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFNIIDKVDSRADVRRIVERVF
Ga0210407_106755981	3300020579	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSSTDVRRMVERASESTSRAAR
Ga0210399_103685102	3300020581	Soil	MPRAKKHPKLSADERAFLNRLCRLNEEEIKQLTTREIFAYFKIIDKVDTAQHSQNSDCVS
Ga0210400_105920922	3300021170	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRTMVERA
Ga0210408_101517341	3300021178	Soil	SADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSSTDVRRMVERASESTSRAAR
Ga0210408_104936931	3300021178	Soil	LSADERAFLNRLDCLNEEEIKQLTTREIFAYFRLIDKVDSSADVRRMVERAK
Ga0213872_100543012	3300021361	Rhizosphere	MPRAKKHPKLSADERAFLNRLDYLTEEEIKQLTTREIFAYFKIIDKVDSRADGR
Ga0213878_101258531	3300021444	Bulk Soil	MPRAKKSIQNCLRTSRAFLDRLDCLNEEEIKQLTTREIFAYFKIVDKVDSRTDV
Ga0210402_110236921	3300021478	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDTAQHSQNSDCVS
Ga0126371_101559834	3300021560	Tropical Forest Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIVDKVDSRADVRRVERAK
Ga0126371_118738851	3300021560	Tropical Forest Soil	MFRIAMPRAKKHPKLSSDERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0126371_128023101	3300021560	Tropical Forest Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMME
Ga0207653_100814411	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKLIDNVDSSADVRRMVERA
Ga0207684_100827373	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPRPKKHPKLFADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMVERA
Ga0207664_119538282	3300025929	Agricultural Soil	SETSRIAMPRAKKHPKLSADERAFHNRLDCLNEEEIKQLTTREIFAYFKLIDNVDSSADVRRMVERAK
Ga0208525_10161552	3300027288	Soil	MPRPKKHPKLFADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSSTDVRRMVERASESTSRAAR
Ga0209799_10121941	3300027654	Tropical Forest Soil	MFRIAMPPAKKHPKLSSDERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0222749_105159092	3300029636	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMVERASESTSRAAR
Ga0318516_100515653	3300031543	Soil	MFRIAMPRAKKHPKLSSDERAFLNRLARLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0318534_101927532	3300031544	Soil	RIAMPRAKKHPKLSSDERAFLNRLARLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0318534_105132032	3300031544	Soil	MPRAKKPPQLSAKERALLNRLDRLSEEEIKRLTTREIFAYFKLIDRVDSRTDIRRMVERAKWRHK
Ga0318541_100394791	3300031545	Soil	MFRIAMPRAKKHPKLSADERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0318541_101262603	3300031545	Soil	MPRAKKHPKLSEDERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDQDHRKVVSRADVRRMMERAK
Ga0310915_103785893	3300031573	Soil	MSRAKKHPKLSADERAFLNRLDCLNEEEIKQLATREIFAYFKIIDKVDSRADVRRMVERV
Ga0310915_106744402	3300031573	Soil	MPRAKKHPKLSEDERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRRWNARSESTSRAAAP
Ga0318542_102889713	3300031668	Soil	SETSGIAMPRAKKHPKLSADERAFLNRLDCLNEEEIKQLATREIFAYFKIIDKVDSRADVRRMVERVI
Ga0306917_101931281	3300031719	Soil	MPRAKKHPKLSEDERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMMERA
Ga0318501_100327133	3300031736	Soil	DECGTSAMFRIAMPRAKKHPKLSADERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0306918_101012356	3300031744	Soil	MPRAKKHPKLSEDERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDQDHRKVVSRAD
Ga0318554_106614122	3300031765	Soil	MSRAKKHPKLSADERAFLNRLDCLNEEEIKQLATREIFAYFKIIDKVDSRADVRRMV
Ga0318543_100061404	3300031777	Soil	MFRIAMPRAKKHPKLSADERAFLNRLDGLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0318543_100502641	3300031777	Soil	DECGTSAMFRIAMPRAKKHPKLSSDERAFLNRLARLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0318529_101453581	3300031792	Soil	SETSGIAMSRAKKHPKLSADERAFLNRLDCLNEEEIKQLATREIFAYFKIIDKVDSRADVRRMVERVI
Ga0318550_103061842	3300031797	Soil	MSRAKKHPKLSADERAFLNRLDCLNEEEIKQLATREIFAYFKIIDKVDSRADVRRMVE
Ga0318564_104050121	3300031831	Soil	SAMFRIAMPRAKKHPKLSADERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0306925_104866673	3300031890	Soil	AKKYPILSADERAFLNRLDYLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMVERVF
Ga0306923_102905903	3300031910	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFNIIDKVDSRADVRRIVERV
Ga0306923_104320702	3300031910	Soil	MNVERALCFAAGALSETSGIAMPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRRWNARSESTSRAAAP
Ga0310912_100743654	3300031941	Soil	KHPKLSEDERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDQDHRKVVSRADVRRMMERAK
Ga0310911_102970532	3300032035	Soil	MSRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFNIIDKVDSRADVRRIVERV
Ga0318570_105977453	3300032054	Soil	MFRIAMPRAKKHPKLSADERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSR
Ga0318533_101924742	3300032059	Soil	DQTSGIAMPRAKKHPKLSEDERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDQDHRKVVSRADVRRMMERAK
Ga0318514_104128241	3300032066	Soil	MPRAKKPPQLSAKERALLNRLDRLSEEEIKRLTTREIFAYFKLIDRVGSRADIRRMVERAKWKHK
Ga0306924_111625092	3300032076	Soil	MPRAKKPPQLSAKERALLNRLDRLSEEEIKRLTTREIFAYFKLIDREVDSRADIRRMVER
Ga0318518_106052181	3300032090	Soil	PRAKNHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRMMERAK
Ga0318540_1000110912	3300032094	Soil	HPKLSSDERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0310914_101444581	3300033289	Soil	AKERALLNRLDRLSEEEIKRLTTREIFAYFKLIDRVDSRTDIRRMVERAKWRHK
Ga0310914_109608891	3300033289	Soil	MPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFKIIDKVDSRADVRRRWNARSESTSRAAAP
Ga0318519_100355091	3300033290	Soil	MSRIAMPRAKKHPKLSADERAFLNRLDRLNEEKIKQFTTREIFAYFKIIDKVDSRADVRQWWNARSE
Ga0318519_108507612	3300033290	Soil	SETSGIAMPRAKKHPKLSADERAFLNRLDCLNEEEIKQLTTREIFAYFNIIDKVDSRADVRRIVERVF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050638

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences