Metagenome / Metatranscriptome Family F050589

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050589
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	92 residues
Representative Sequence	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL
Number of Associated Samples	111
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.10 %
% of genes near scaffold ends (potentially truncated)	37.24 %
% of genes from short scaffolds (< 2000 bps)	86.90 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.069 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (20.690 % of family members)
Environment Ontology (ENVO)	Unclassified (33.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.793 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 60.64% Coil/Unstructured: 39.36%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00933	Glyco_hydro_3	33.10
PF12697	Abhydrolase_6	14.48
PF00069	Pkinase	2.07
PF13280	WYL	1.38
PF04672	Methyltransf_19	0.69
PF00378	ECH_1	0.69
PF05598	DUF772	0.69
PF04542	Sigma70_r2	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	33.10
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	8.28
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.69
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.69
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.69
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.07 %
Unclassified	root	N/A	17.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.07 %
Unclassified	root	N/A	17.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.07 %
Unclassified	root	N/A	17.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.48 %
Unclassified	root	N/A	17.93 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.38 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.48 %
Unclassified	root	N/A	17.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.72 %
Unclassified	root	N/A	17.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.45 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.45 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.07 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.07 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.93 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.45 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.07 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.07 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.93 %
Planotetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora	3.45 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	2.76 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	2.07 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.07 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.93 %
Planotetraspora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	3.45 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	2.07 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.07 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Amycolatopsis alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis alba	0.69 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.93 %
Planotetraspora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	3.45 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	2.07 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.07 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Kribbella sp. VKM Ac-2527	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2527	0.69 %
Amycolatopsis alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis alba	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig10218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1004	Open in IMG/M
3300004479\|Ga0062595_101359883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
3300004633\|Ga0066395_10844749	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005093\|Ga0062594_100393989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1114	Open in IMG/M
3300005162\|Ga0066814_10006200	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300005169\|Ga0066810_10094141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300005330\|Ga0070690_101483251	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005332\|Ga0066388_100302947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2243	Open in IMG/M
3300005332\|Ga0066388_100995441	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300005332\|Ga0066388_103759718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300005332\|Ga0066388_107095990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300005337\|Ga0070682_100277757	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300005436\|Ga0070713_101819695	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005436\|Ga0070713_102457503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300005545\|Ga0070695_100190375	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300005549\|Ga0070704_100982772	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005563\|Ga0068855_101671309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300005568\|Ga0066703_10292510	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300005614\|Ga0068856_100027134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5587	Open in IMG/M
3300005615\|Ga0070702_101311519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300005713\|Ga0066905_101779496	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005764\|Ga0066903_101332311	Not Available	1343	Open in IMG/M
3300005764\|Ga0066903_103547292	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005764\|Ga0066903_103774055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	814	Open in IMG/M
3300005764\|Ga0066903_105670208	Not Available	657	Open in IMG/M
3300005764\|Ga0066903_107118647	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300006028\|Ga0070717_11869598	Not Available	542	Open in IMG/M
3300006046\|Ga0066652_101442916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300006047\|Ga0075024_100716410	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300006057\|Ga0075026_100734277	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006059\|Ga0075017_100056310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2655	Open in IMG/M
3300006162\|Ga0075030_100122995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2108	Open in IMG/M
3300006162\|Ga0075030_101408743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis alba	546	Open in IMG/M
3300006173\|Ga0070716_101421751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300006354\|Ga0075021_10134460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1487	Open in IMG/M
3300006581\|Ga0074048_12662670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300006605\|Ga0074057_11955629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300006797\|Ga0066659_11385157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300006852\|Ga0075433_10124457	All Organisms → cellular organisms → Bacteria	2290	Open in IMG/M
3300009093\|Ga0105240_11742926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	650	Open in IMG/M
3300009101\|Ga0105247_10124874	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300009174\|Ga0105241_10369407	Not Available	1250	Open in IMG/M
3300009792\|Ga0126374_10136222	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300009792\|Ga0126374_10237357	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300010043\|Ga0126380_10725166	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300010046\|Ga0126384_10087907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2258	Open in IMG/M
3300010047\|Ga0126382_11153273	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300010047\|Ga0126382_12337652	Not Available	517	Open in IMG/M
3300010048\|Ga0126373_10658343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	1103	Open in IMG/M
3300010048\|Ga0126373_11132775	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300010154\|Ga0127503_10133486	Not Available	517	Open in IMG/M
3300010154\|Ga0127503_10210563	Not Available	1588	Open in IMG/M
3300010358\|Ga0126370_10507168	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300010358\|Ga0126370_11241094	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300010358\|Ga0126370_11846648	Not Available	586	Open in IMG/M
3300010359\|Ga0126376_12486558	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010360\|Ga0126372_10498612	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300010361\|Ga0126378_10272039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	1792	Open in IMG/M
3300010361\|Ga0126378_12052310	Not Available	652	Open in IMG/M
3300010362\|Ga0126377_11354266	Not Available	784	Open in IMG/M
3300010362\|Ga0126377_12416777	Not Available	601	Open in IMG/M
3300010362\|Ga0126377_12732944	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010366\|Ga0126379_10520767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	1264	Open in IMG/M
3300010366\|Ga0126379_13001257	Not Available	565	Open in IMG/M
3300010376\|Ga0126381_100170012	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300010376\|Ga0126381_101289212	Not Available	1056	Open in IMG/M
3300010398\|Ga0126383_10484226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1293	Open in IMG/M
3300010398\|Ga0126383_11294963	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300010398\|Ga0126383_12759904	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012198\|Ga0137364_10194021	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300012199\|Ga0137383_10179630	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300012200\|Ga0137382_10598599	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300012201\|Ga0137365_10005460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10195	Open in IMG/M
3300012206\|Ga0137380_11532861	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300012207\|Ga0137381_10409676	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300012208\|Ga0137376_10878623	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300012356\|Ga0137371_10426926	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300012356\|Ga0137371_10747913	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300012361\|Ga0137360_10674277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2527	887	Open in IMG/M
3300012683\|Ga0137398_10883333	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300012948\|Ga0126375_11762115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300012951\|Ga0164300_11029493	Not Available	532	Open in IMG/M
3300012960\|Ga0164301_10286183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1102	Open in IMG/M
3300012960\|Ga0164301_11226093	Not Available	604	Open in IMG/M
3300012971\|Ga0126369_10173199	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300012971\|Ga0126369_10432646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	1361	Open in IMG/M
3300012984\|Ga0164309_10165597	Not Available	1487	Open in IMG/M
3300012985\|Ga0164308_10225310	Not Available	1446	Open in IMG/M
3300012986\|Ga0164304_10321073	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300015241\|Ga0137418_10621639	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300016270\|Ga0182036_10986680	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300017939\|Ga0187775_10024827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1675	Open in IMG/M
3300017947\|Ga0187785_10075537	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300017959\|Ga0187779_10270601	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300017966\|Ga0187776_10143505	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300017966\|Ga0187776_10737194	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300018058\|Ga0187766_10195373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1276	Open in IMG/M
3300018060\|Ga0187765_10017952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3318	Open in IMG/M
3300018060\|Ga0187765_10996484	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300018089\|Ga0187774_10707569	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300019890\|Ga0193728_1314846	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300020581\|Ga0210399_11481988	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300021420\|Ga0210394_10215868	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300021559\|Ga0210409_10972899	Not Available	723	Open in IMG/M
3300021560\|Ga0126371_10133099	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300021560\|Ga0126371_11157770	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300022533\|Ga0242662_10257957	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300024283\|Ga0247670_1111419	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	508	Open in IMG/M
3300025905\|Ga0207685_10305559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300025906\|Ga0207699_11318363	Not Available	534	Open in IMG/M
3300026494\|Ga0257159_1078365	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300026498\|Ga0257156_1020017	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300027874\|Ga0209465_10047359	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300027911\|Ga0209698_10154664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1879	Open in IMG/M
3300031170\|Ga0307498_10006422	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300031231\|Ga0170824_123849776	Not Available	918	Open in IMG/M
3300031446\|Ga0170820_12586285	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300031469\|Ga0170819_14415886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300031474\|Ga0170818_113281100	Not Available	576	Open in IMG/M
3300031543\|Ga0318516_10154073	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300031543\|Ga0318516_10364245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300031572\|Ga0318515_10010133	All Organisms → cellular organisms → Bacteria	4179	Open in IMG/M
3300031720\|Ga0307469_10055284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2525	Open in IMG/M
3300031771\|Ga0318546_10654540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300031782\|Ga0318552_10739510	Not Available	502	Open in IMG/M
3300031793\|Ga0318548_10587977	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300031893\|Ga0318536_10209110	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300031897\|Ga0318520_10494983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300031941\|Ga0310912_10402351	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300031947\|Ga0310909_10943549	Not Available	707	Open in IMG/M
3300031954\|Ga0306926_10318555	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300032009\|Ga0318563_10326921	Not Available	830	Open in IMG/M
3300032009\|Ga0318563_10373344	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300032035\|Ga0310911_10783671	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	551	Open in IMG/M
3300032055\|Ga0318575_10473130	Not Available	636	Open in IMG/M
3300032770\|Ga0335085_10140441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3047	Open in IMG/M
3300032770\|Ga0335085_10192739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2504	Open in IMG/M
3300032783\|Ga0335079_10220348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	2098	Open in IMG/M
3300032783\|Ga0335079_10618685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1140	Open in IMG/M
3300032805\|Ga0335078_10270781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2303	Open in IMG/M
3300032805\|Ga0335078_10467400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1632	Open in IMG/M
3300032828\|Ga0335080_10590665	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300032828\|Ga0335080_12296733	Not Available	516	Open in IMG/M
3300032892\|Ga0335081_11162475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300033806\|Ga0314865_041307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1179	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.86%
Host-Associated	Host-Associated	4.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.66%
Aquatic	Environmental → Aquatic	6.21%
Plants	Host-Associated → Plants	4.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.66%
Sediment	Environmental → Aquatic → Sediment	4.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.76%
Freshwater	Environmental → Aquatic → Freshwater	1.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.69%
Loam	Environmental → Terrestrial → Soil → Loam	15.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.76%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.38%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.28%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.21%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.07%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.38%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00342910	2166559006	Grass Soil	VTDVPAEQITLTNFEITVGSRGRYKIYGEAVNNGATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0062595_1013598832	3300004479	Soil	VTDSPAEQITLTNFEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGEVIGRASGSVSRLVTSQAKPFWLRASNDVSDHASMRVQVDCIF*
Ga0066395_108447491	3300004633	Tropical Forest Soil	VTDLPAEQITLTNFEVTAGSRGRCKIYGEAVNNCATELSAILGVTFYDINGEVIGKASGSVNRLQASQPKPFWLRASNDVSDHATMR
Ga0062594_1003939892	3300005093	Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0066814_100062002	3300005162	Soil	VTDFPAEQITLTNFEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGEVIGRASGSVSRLVTSQAKPFWLRASNDVSDHASMRVQVDCIF*
Ga0066810_100941411	3300005169	Soil	VPDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGEVIGRASGSVSRLVTSQAKPFWLRASNDVSDHASMRVQVDCIF*
Ga0070690_1014832512	3300005330	Switchgrass Rhizosphere	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLATSRATPFWLRASN
Ga0066388_1003029475	3300005332	Tropical Forest Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNGATELSAILGVTFYDVDGAVIGQASGSVNRLPASRPKPFWLRASNDVSDHATMR
Ga0066388_1009954413	3300005332	Tropical Forest Soil	VADLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEIIGQASGSVNRLSTSQPKPFWLRVSNDVSDHATMRVQVDCIL*
Ga0066388_1037597182	3300005332	Tropical Forest Soil	VSDSPAEQITLTNLEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGGVIGRASGSVNRLVTSQAKPFWLRASSDVSDHASMRVQVDCIC*
Ga0066388_1070959902	3300005332	Tropical Forest Soil	VSDLPAEQITLANVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIL*
Ga0070682_1002777571	3300005337	Corn Rhizosphere	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCASELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0070713_1018196951	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTDLPAEQITLTNFEVTVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVNRLVTSRATPFWLRASNDVSDHASM
Ga0070713_1024575031	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PAEQITLTNVEVTAGSRGRYKIYGEAVNNCASELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0070695_1001903752	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VTDFPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0070704_1009827722	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VTDFPAEQITLTNVEVTAGSRGRYKIYGEAVNNCASELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0068855_1016713091	3300005563	Corn Rhizosphere	EVTAGSRGRYKIYGEAVNNCASELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0066703_102925102	3300005568	Soil	VTDLPAEQITLTNCEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSAHASMRVQVDCIL*
Ga0068856_1000271346	3300005614	Corn Rhizosphere	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCETELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0070702_1013115191	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0066905_1017794961	3300005713	Tropical Forest Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNGATELSAILGVTFYDIDGEVIGRASGSVNRLPASQPKPFWLRA
Ga0066903_1013323112	3300005764	Tropical Forest Soil	MTGRQGAHVNDRPAEQITLSNVTVKEGSRGRYHIYGEAVNNCDTELSAILGVTFYNADGTVIGRASGSVNGVSTSQTKAFWMRVSNNVAGYASIKVKVDCIL*
Ga0066903_1035472922	3300005764	Tropical Forest Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNGATELSAILGVTFYDVDGAVIGQASGSVNRLPASRPKPFWLRASNDVSDHATMSVQVDCIL*
Ga0066903_1037740551	3300005764	Tropical Forest Soil	VTDLPAEQITLTNFEVTAGSRGRCKIYGEAVNNCATELSAILGVTFYDVDGEVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIL*
Ga0066903_1056702081	3300005764	Tropical Forest Soil	GLIDSQGASVSDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNGATELSAILGVTFYDIDGEVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMSVQADCIL*
Ga0066903_1071186472	3300005764	Tropical Forest Soil	VPDLPAEHITLTNVEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGGVIGRASGSVSRLAKSQAKPFWLRASNDVSNHASMRVQVDCIL*
Ga0070717_118695982	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTDLPAEQITLTNFEVTAGSRGRCKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVNRLVTARATPFWLRASNDVSDHASMRVQVDCIL*
Ga0066652_1014429161	3300006046	Soil	SRGRYKIYGEAVNNGATELSAILGVTFYDIDGEVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIL*
Ga0075024_1007164101	3300006047	Watersheds	VTDIPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIV*
Ga0075026_1007342772	3300006057	Watersheds	VPDLPAEQITLTNIEVTVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIV*
Ga0075017_1000563103	3300006059	Watersheds	VTDLPAEQIILTNVTVKEGSRGRYQIYGEAVNSCDTELSAILGVTFYGSDGTVIGQASGSVNKLAAFQTKEFWLRVSRDVSGYAAVKVAVDCIL*
Ga0075030_1001229952	3300006162	Watersheds	VTDLPAEQIILTNVTLKEGSRGRYQIYGEAVNSCDTELSAILGVTFYGSDGTVIGQASGSVNKLAAFQTKEFWLRVSRDVSGYAAVKVAVDCIL*
Ga0075030_1014087431	3300006162	Watersheds	VTDPSAEQITLTNFTVKEGSRGRYEIYGEAINNCLTELSAILSVTFFDADGTVMGRASNSVNRLAACQTKAFMLRASNDVSGYASMKIQVDCIV*
Ga0070716_1014217512	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTDVPAEQITVTNVEVMAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0075021_101344602	3300006354	Watersheds	VPDLPAEQITLTNLEVTVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIV*
Ga0074048_126626702	3300006581	Soil	EVTVGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGEVIGKASGSVNRLVTSRATPFWLRASNDVSGHASMRVQVDCIF*
Ga0074057_119556292	3300006605	Soil	TVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMKVQVDCIF*
Ga0066659_113851571	3300006797	Soil	VTDIPAEQITLTNFEITAGSRGRYKIYGEAVNNCAAELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL*
Ga0075433_101244572	3300006852	Populus Rhizosphere	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0105240_117429262	3300009093	Corn Rhizosphere	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSAHASMRVQVDCIL*
Ga0105247_101248742	3300009101	Switchgrass Rhizosphere	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGEVIVRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0105241_103694071	3300009174	Corn Rhizosphere	ITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0126374_101362222	3300009792	Tropical Forest Soil	VTDSPAEQITLTNLEVTAGSRGRYKIYGEAVNNSPTELSAILGVTFYDIDGGVIGRASGSVNRLVTSQAKPFWLRASSDVSDHASMRVQVDCIC*
Ga0126374_102373572	3300009792	Tropical Forest Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNGGTELSAILGVTFYDIDGEVIGQASGSVNRLIASQPKPFWLRASNDVSDHATMSVQVDCIL*
Ga0126380_107251662	3300010043	Tropical Forest Soil	VADLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEIIGQASGSVNRLSTSQPKPFWLRVSNDVSNHATMRVQVDCIL*
Ga0126384_100879072	3300010046	Tropical Forest Soil	VTDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDVDGEIIGRASGSVNRLPTSQPKPFWLRASNDVSDHATMRVQVDCIL*
Ga0126382_111532732	3300010047	Tropical Forest Soil	VTDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVNRLPTSQPKPFWLRASNDVSDHATMRVQVNCIL*
Ga0126382_123376521	3300010047	Tropical Forest Soil	IDGQGASVTDLPAEQITLTNVEITAGSRGRYKIYGEAVNNCATELSAILGVTFYGIDGEVVGRASGSVNRLVTSQATPFWLRASNDVSDHATMRVKVDCIL*
Ga0126373_106583432	3300010048	Tropical Forest Soil	VSDLPAEQITLTNVEATAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIL*
Ga0126373_111327752	3300010048	Tropical Forest Soil	VPDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGGVIGRASGSVSRLATSQAKPFWLRASNDVSNHASMRVQVDCIL*
Ga0127503_101334862	3300010154	Soil	GAGLIDSQGASVTDVPAEQITLTNFEITAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRIQVDCIL*
Ga0127503_102105632	3300010154	Soil	MACRRPARWHRVDGAGFIDGQGASVTDLPAEQISLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLVTSRATPFWLRASNDVSGHASMRVQVDCIL*
Ga0126370_105071681	3300010358	Tropical Forest Soil	LIVLGLIDSQGASVSDLPAEQITLANVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIL*
Ga0126370_112410942	3300010358	Tropical Forest Soil	VADLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEIIGQASGSVNRLSASQPKPFWLRVSNDVSDHATMRVQVDCIL*
Ga0126370_118466482	3300010358	Tropical Forest Soil	VSDSPAEKITLTNLEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGGVIGRASGSVNRLVTSQAKPFWLRASSDVSDHASMRVQVDCIC*
Ga0126376_124865582	3300010359	Tropical Forest Soil	VTDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEIIGQASGSVNRLSASQPKPFWLRVSNDVSDHATMRVQVDCIL*
Ga0126372_104986122	3300010360	Tropical Forest Soil	VSDSPAEQITLTNLEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGGVIGRASGSVSRLVTSQAKPFWLRASSDVSDHASMRVQVDCIF*
Ga0126378_102720393	3300010361	Tropical Forest Soil	VSDLPAEQITLANVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGDVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIV*
Ga0126378_120523101	3300010361	Tropical Forest Soil	RPGGKWHRVDCAGLIDSQGAFVPDLPAEQITLTNVEAIAGSRGRYKIYGEAVNNCAAEVSAILGVTFYDIDGGVIGRASGSVSRLATSQAKPFWLRASNDVSNHASMRVQVDCIL*
Ga0126377_113542661	3300010362	Tropical Forest Soil	VTDLPAEQITLTNVEITAGSRGRYKIYGEAVNNCATELSAILGVTFYGIDGEVVGRASGSVNRLVTSQATPFWLRASNDVSDHATMRVQVDCIV*
Ga0126377_124167771	3300010362	Tropical Forest Soil	PAEQITLTNVEVTAGSRGRYKIYGEAVNNGGTELSAILGVTFYDIDGEVIGQASGSVNRLIASQPKPFWLRASNDVSDHATMSVQVDCIL*
Ga0126377_127329442	3300010362	Tropical Forest Soil	VADLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEIIGQASGSVNRLSTSQPKPFWLRVSNDVSDH
Ga0126379_105207672	3300010366	Tropical Forest Soil	VTDLPAEQITLTNFEVTAGSRGRCKIYGEAVNNCATELSAILGVTFYDVDGEVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIV*
Ga0126379_130012571	3300010366	Tropical Forest Soil	ANVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIARASGSVNRLPASQPKPFWLRASNDVSDHASMRVQVDCIF*
Ga0126381_1001700122	3300010376	Tropical Forest Soil	VPDLPAEHITLTNFEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGGVIGRASGSVSRLATSQAKPFWLRASNDVSNHASMRVQVDCIL*
Ga0126381_1012892122	3300010376	Tropical Forest Soil	SDLPAEQITLANVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLSTSQAKPFWLRASNDVSDHATMRVQVDCIL*
Ga0126383_104842262	3300010398	Tropical Forest Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGDVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIL*
Ga0126383_112949631	3300010398	Tropical Forest Soil	LIVLGLIDSQGASVSDLPAEQITLANVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLLASQPRPFWLRASNDVSDHATMRVQVDCIL*
Ga0126383_127599042	3300010398	Tropical Forest Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNGGTELSAILGVTFYDIDGEVIGQASGSVNRLPASQPKPFWLRASNDVSAHATMRVRVDCILSR*
Ga0137364_101940212	3300012198	Vadose Zone Soil	VADLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLVASQVKPFWLRASNDVSDHASMRVQVDCIL*
Ga0137383_101796301	3300012199	Vadose Zone Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL*
Ga0137382_105985992	3300012200	Vadose Zone Soil	VTDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSAHASMRVQVDCIL*
Ga0137365_1000546011	3300012201	Vadose Zone Soil	VTDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVVGRASGSVSRLVASQAKPFWLRASNDVSDHASMRVQVDCIV*
Ga0137380_115328611	3300012206	Vadose Zone Soil	TLTNFEVTAGSRGRYKIYGEAVNNCAAELSAILGVTFYDIDGEVIGRASGSVSRLVTSEAKPFWLRASNDVSDHASMRVQVDCIV*
Ga0137381_104096762	3300012207	Vadose Zone Soil	VTDIPAEQITLTNVEITAGSRGRYKIYGEAVNNCAAELSAILGVTFYDIDGEVMGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIV*
Ga0137376_108786232	3300012208	Vadose Zone Soil	VADLPAEQITLTNFEVTAGSRGRYKLYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLVASQVKPFWLRASNDVSDHASMRVQVDCIL*
Ga0137371_104269262	3300012356	Vadose Zone Soil	VTDLPAEQITLTNFEVTVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVVGRASGSVSRLVASQAKPFWLRASNDVSDHASMRVQVDCIV*
Ga0137371_107479132	3300012356	Vadose Zone Soil	VADPPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLVASQVKPFWLRASNDVSDHASMRVQVDCIL*
Ga0137360_106742771	3300012361	Vadose Zone Soil	NVEITAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLVTSEAKPFWLRASNDVSDHASMRVQVDCIL*
Ga0137398_108833332	3300012683	Vadose Zone Soil	VTDVPAEQITLTNVEITAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL*
Ga0126375_117621152	3300012948	Tropical Forest Soil	VTDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEIIGQASGSVNRLSTSQPKPFWLRVSNDVSDHATM
Ga0164300_110294931	3300012951	Soil	MVPGLSTAKGASVTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLVTSRATPFWLRASNDVSGHASMRVQVDCIV*
Ga0164301_102861831	3300012960	Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEIIGKASGSVNRLVTSRATPFWLRASNDVSGHASMRVQVDCIL*
Ga0164301_112260931	3300012960	Soil	GSRGRYKIYGEAVNNCTTELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL*
Ga0126369_101731994	3300012971	Tropical Forest Soil	VPDLPAEHITLTNVEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGGVIGRASGSVSRLAKSQAKPFWLRA
Ga0126369_104326462	3300012971	Tropical Forest Soil	VTDLPAEQITLTNFEVTAGSRGRCKIYGEAVNNCATELSAILGVTFYDISGEVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIL*
Ga0164309_101655972	3300012984	Soil	DLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYGIDGEVIGRASGSVNRLPTSQPKPFWLRASNDVSGHATMRIKVDCIL*
Ga0164308_102253102	3300012985	Soil	GSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLVTSRATPFWLRASNDVSGHASMRVQVDCIL*
Ga0164304_103210732	3300012986	Soil	DGAGLIDSQGASVPDLPAEQITLTNLEVTVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIV*
Ga0137418_106216393	3300015241	Vadose Zone Soil	VTDVPAEQITLTNVEITAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVS
Ga0182036_109866802	3300016270	Soil	VPDLPAEQIALTNLEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGQVIGQASGSVSRLAASQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0187775_100248272	3300017939	Tropical Peatland	VTDSPAEQITLTNFEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGEVIGRASGSVSRLVTSQAKPFWLRASSDVSDHASMRVQVDCIC
Ga0187785_100755371	3300017947	Tropical Peatland	VTDSPAEQITLTNFEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGEVVGRASGSVSRLVTSQAKPFWLRASNDVSDHASMRVQVDCIF
Ga0187779_102706012	3300017959	Tropical Peatland	VTGLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCANELSAILGVTFYDIDGEVIGTASGSVSRLTTSQAKPFWLRASNDVSDHASMRVQVDCIF
Ga0187776_101435052	3300017966	Tropical Peatland	VTGLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCANELSAILGVTFYDIDGEVIGTASGSVNRLTTSQAKPFWLRASNDVSDHASMRVQVDCIF
Ga0187776_107371942	3300017966	Tropical Peatland	VPDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCSTELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0187766_101953731	3300018058	Tropical Peatland	AGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLSESQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0187765_100179525	3300018060	Tropical Peatland	VPDPPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLSQSQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0187765_109964842	3300018060	Tropical Peatland	VPDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLSESQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0187774_107075691	3300018089	Tropical Peatland	TAGSRGRYKIYGEAVNNCSTELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIF
Ga0193728_13148462	3300019890	Soil	VTDVPAEQITLTNVEITAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRIQVDCIL
Ga0210399_114819881	3300020581	Soil	AEQITLTNLEVTVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIV
Ga0210394_102158681	3300021420	Soil	VPDLPAEQITLTNLEVTVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIV
Ga0210409_109728991	3300021559	Soil	GSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0126371_101330993	3300021560	Tropical Forest Soil	VSDLPAEQITLANVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLPASQPKPFWLRASNDVSDHATMRVQVDCIL
Ga0126371_111577702	3300021560	Tropical Forest Soil	VPDLPAEQIILTNVEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGEVIGRASGSVSRLSTSQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0242662_102579571	3300022533	Soil	IDSQGASVPDLPAEQITLTNLEVTVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0247670_11114191	3300024283	Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCASELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMR
Ga0207685_103055592	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASND
Ga0207699_113183631	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	CRRLARWHRVDGVGLIDGQGASVTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL
Ga0257159_10783652	3300026494	Soil	VTDLPAEQITLTNFEITAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0257156_10200172	3300026498	Soil	VTDVPAEQITLTNVEITAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0209465_100473592	3300027874	Tropical Forest Soil	VTDLPAEQITLTNFEVTAGSRGRCKIYGEAVNNCATELSAILGVTFYDIDGEVIGQASGSVNRLPASQPKPFWLRASNDVSNHATMRVRVDCIL
Ga0209698_101546642	3300027911	Watersheds	VTDLPAEQIILTNVTVKEGSRGRYQIYGEAVNSCDTELSAILGVTFYGSDGTVIGQASGSVNKLAAFQTKEFWLRVSRDVSGYAAVKVAVDCIL
Ga0307498_100064222	3300031170	Soil	VPDLPAEQITLTNLEVTVGSRGRYKIYGEAVNNGATELSAILGVTFYDIDGEVIGRASGSVSRLAASQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0170824_1238497761	3300031231	Forest Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGKASGSVNRLVTSRATPFWLRASNDVSGHASMRVQVDCIL
Ga0170820_125862851	3300031446	Forest Soil	VTDVPAEQITLTNVEITAGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLAASQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0170819_144158861	3300031469	Forest Soil	VTDVPAEQIALTNFEITAGSRGRYKIYGEAVNNGATELSAILGVTFYDIDGEVIGRASGSVSRLAASQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0170818_1132811001	3300031474	Forest Soil	VPDLPAEQITLTNIEVTVGSRGRYKIYGEAVNNCATELSAILGVTFYDIDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIV
Ga0318516_101540732	3300031543	Soil	VPDLPAEQIALTNLEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGEVLGRASGSVSRLARSQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0318516_103642452	3300031543	Soil	VTDLPAERITLTNVEVTAGSRGRYKIYGEAVNNCGTELSAILGVTFYDIDGEVIGKASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCVL
Ga0318515_100101332	3300031572	Soil	VPDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDVDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0307469_100552845	3300031720	Hardwood Forest Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCASELSAILGVTFYDIHGEVIGRASGSVNRLATSRATPFWLRASNDVSDHASMRVQV
Ga0318546_106545402	3300031771	Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCGTELSAILGVTFYDIDGEVIGKASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCVL
Ga0318552_107395102	3300031782	Soil	TDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCGTELSAILGVTFYDIDGEVIGKASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCVL
Ga0318548_105879771	3300031793	Soil	VPDLPAEQIALTNLEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDVDGEVIGRASGSVSRLATSQAKPFWLRASNDVSDHASMRVQVDCIL
Ga0318536_102091102	3300031893	Soil	VPDLPAEQIALTNLEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGQVIGQASGSVSRLAASQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0318520_104949831	3300031897	Soil	VTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCGTELSAILGVTFYDIDGEVIGRASGSVNRLTTSRPKPFWLRASNDV
Ga0310912_104023511	3300031941	Soil	VPDLPAEQIALTNLEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGQVIGQASGSVSRLAASQAKPFWLRASNDVSGHASMRVQVD
Ga0310909_109435492	3300031947	Soil	DLPAEQIALTNLEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGQVIGQASGSVSRLAASQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0306926_103185552	3300031954	Soil	SVTDLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCGTELSAILGVTFYDIDGEVIGKASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCVL
Ga0318563_103269211	3300032009	Soil	TNVEVTAGSRGRYKIYGEAVNNCGTELSAILGVTFYDIDGEVIGKASGSVNRLATSRATPFWLRASNDVSDHASMRVQVDCIL
Ga0318563_103733441	3300032009	Soil	VPDLPAEQITLTNFEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGEVLGRASGSVSRLARSQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0310911_107836711	3300032035	Soil	VPDLPAEQIALTNLEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGEVLGRASGSVSRLARSQAKPFWLRASNDVSGHASMRVQVDCI
Ga0318575_104731301	3300032055	Soil	HRVDAAGLLDSQGASVPDLPAEQIALTNLEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGEVLGRASGSVSRLARSQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0335085_101404412	3300032770	Soil	VTGLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCTNELSAILGVTFYDIDGEVIGTASGSVSRLTASQAKPFWLRASNDVSDHASMRVQVDCIY
Ga0335085_101927394	3300032770	Soil	VTGLPAEQITLTNVEVTAGSRGRYKIYGEAVNNCANELSAILGVTFYDIDGEVIGTASGSVNRLITSQAKPFWLRASNDVSDHASMRVQVDCIF
Ga0335079_102203483	3300032783	Soil	VPDPPAEQITLTNVEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGEVIGRASGSVSRLSESQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0335079_106186852	3300032783	Soil	VTDSPAEQITLTNVEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGEVIGRASGSVNRLVTSQAKPFWLRASNDVSDHASMRVQVDCVF
Ga0335078_102707814	3300032805	Soil	VTDLPAEQITLTNLEVTAGSRGRYKIYGEAVNNGVTELSAILGVTFYDIDGGVVGRASGSVNRLVTSKAKPFWLRASNDVSDHASMSVQVDCIL
Ga0335078_104674001	3300032805	Soil	LTNVEVTAGSRGRYKIYGEAVNNCATEVSAILGVTFYDIDGEVIGRASGSVSRLSESQAKPFWLRASNDVSGHASMRVQVDCIL
Ga0335080_105906651	3300032828	Soil	VEVTAGSRGRYKIYGEAVNNSATELSAILGVTFYDIDGEVIGRASGSVNRLVTSQAKPFWLRASNDVSDHASMRVQVDCVF
Ga0335080_122967331	3300032828	Soil	VEVTAGSRGRYKIYGEAVNNCTNELSAILGVTFYDIDGEVIGTASGSVSRLTASQAKPFWLRASNDVSDHASMRVQVDCIY
Ga0335081_111624751	3300032892	Soil	VTDLPAEQITLTNLEVTAGSRGRYKIYGEAVNNGVTELSAILGVTFYDIDGGVVGRASGSVNRLVTSKAKPFWLRASNDVS
Ga0314865_041307_918_1178	3300033806	Peatland	ITLTNVEVTAGSRGRYKIYGEAVNNCANELSAILGVTFYDIDGEVIGTASGSVSRLTTSQAKPFWLRASNDVSDHASMRVQVDCIF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050589

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences