Metagenome Family F050583

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050583
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	46 residues
Representative Sequence	MLVLLMVFEISVALALGFVVGRIYQIRRYELERGFTLPPTARIPQP
Number of Associated Samples	95
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.69 %
% of genes near scaffold ends (potentially truncated)	39.31 %
% of genes from short scaffolds (< 2000 bps)	89.66 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.966 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.586 % of family members)
Environment Ontology (ENVO)	Unclassified (48.276 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.966 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.30% β-sheet: 0.00% Coil/Unstructured: 52.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF06577	EipA	11.03
PF01068	DNA_ligase_A_M	6.21
PF04226	Transgly_assoc	2.76
PF04519	Bactofilin	2.07
PF13545	HTH_Crp_2	1.38
PF00036	EF-hand_1	0.69
PF00311	PEPcase	0.69
PF13202	EF-hand_5	0.69
PF13499	EF-hand_7	0.69
PF02735	Ku	0.69
PF02321	OEP	0.69
PF05990	DUF900	0.69
PF00589	Phage_integrase	0.69
PF00113	Enolase_C	0.69
PF13701	DDE_Tnp_1_4	0.69
PF16822	ALGX	0.69
PF13432	TPR_16	0.69
PF04392	ABC_sub_bind	0.69
PF00196	GerE	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	6.21
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	6.21
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.76
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	2.07
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.38
COG0148	Enolase	Carbohydrate transport and metabolism [G]	0.69
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.69
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	0.69
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.69
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
All Organisms	root	All Organisms	31.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
cellular organisms	root	All Organisms → cellular organisms	31.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.62 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.03 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.14 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.14 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.07 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.38 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.69 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.14 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.69 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.69 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.69 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.14 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.69 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.69 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.69 %
Ramlibacter tataouinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.14 %
Bradyrhizobium sp. AUGA SZCCT0240	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0240	0.69 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.69 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.69 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.69 %
Ramlibacter tataouinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10014123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3032	Open in IMG/M
3300005168\|Ga0066809_10174612	Not Available	569	Open in IMG/M
3300005179\|Ga0066684_10289812	Not Available	1085	Open in IMG/M
3300005179\|Ga0066684_11108699	Not Available	506	Open in IMG/M
3300005184\|Ga0066671_10394225	Not Available	885	Open in IMG/M
3300005187\|Ga0066675_10433734	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300005332\|Ga0066388_106826022	Not Available	575	Open in IMG/M
3300005437\|Ga0070710_10166512	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300005437\|Ga0070710_10672756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300005451\|Ga0066681_10613895	Not Available	669	Open in IMG/M
3300005560\|Ga0066670_10363507	Not Available	883	Open in IMG/M
3300005569\|Ga0066705_10156586	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300005587\|Ga0066654_10243525	Not Available	946	Open in IMG/M
3300005764\|Ga0066903_100461472	Not Available	2129	Open in IMG/M
3300005764\|Ga0066903_101091192	Not Available	1470	Open in IMG/M
3300005764\|Ga0066903_101769419	All Organisms → cellular organisms → Bacteria → Proteobacteria	1179	Open in IMG/M
3300005764\|Ga0066903_105433139	Not Available	672	Open in IMG/M
3300005764\|Ga0066903_108692581	Not Available	516	Open in IMG/M
3300006028\|Ga0070717_11167871	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300006028\|Ga0070717_11674403	Not Available	576	Open in IMG/M
3300006052\|Ga0075029_100238752	Not Available	1145	Open in IMG/M
3300006052\|Ga0075029_100578051	Not Available	749	Open in IMG/M
3300006057\|Ga0075026_100562830	Not Available	665	Open in IMG/M
3300006057\|Ga0075026_100672435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	616	Open in IMG/M
3300006174\|Ga0075014_100064618	Not Available	1615	Open in IMG/M
3300006804\|Ga0079221_11661287	Not Available	519	Open in IMG/M
3300007076\|Ga0075435_100969808	Not Available	742	Open in IMG/M
3300010048\|Ga0126373_11379014	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300010048\|Ga0126373_11893989	Not Available	659	Open in IMG/M
3300010359\|Ga0126376_10107139	Not Available	2146	Open in IMG/M
3300010359\|Ga0126376_12428369	Not Available	571	Open in IMG/M
3300010361\|Ga0126378_10720216	Not Available	1109	Open in IMG/M
3300010361\|Ga0126378_11492195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	766	Open in IMG/M
3300010361\|Ga0126378_12300275	Not Available	615	Open in IMG/M
3300010366\|Ga0126379_11349827	Not Available	819	Open in IMG/M
3300010376\|Ga0126381_100381012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1959	Open in IMG/M
3300010376\|Ga0126381_102239901	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012206\|Ga0137380_10122819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2372	Open in IMG/M
3300012208\|Ga0137376_10843696	Not Available	788	Open in IMG/M
3300012211\|Ga0137377_10157044	Not Available	2180	Open in IMG/M
3300012211\|Ga0137377_11102661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300012948\|Ga0126375_11417358	Not Available	590	Open in IMG/M
3300014166\|Ga0134079_10447472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	612	Open in IMG/M
3300015357\|Ga0134072_10434657	Not Available	525	Open in IMG/M
3300016270\|Ga0182036_10145305	Not Available	1681	Open in IMG/M
3300016294\|Ga0182041_10287033	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300016294\|Ga0182041_10733323	Not Available	878	Open in IMG/M
3300016294\|Ga0182041_11354898	Not Available	652	Open in IMG/M
3300016294\|Ga0182041_11784277	Not Available	570	Open in IMG/M
3300016319\|Ga0182033_10491871	Not Available	1052	Open in IMG/M
3300016319\|Ga0182033_11568212	Not Available	595	Open in IMG/M
3300016357\|Ga0182032_10177386	Not Available	1602	Open in IMG/M
3300016357\|Ga0182032_10314002	Not Available	1242	Open in IMG/M
3300016357\|Ga0182032_11413984	Not Available	602	Open in IMG/M
3300016387\|Ga0182040_10041996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2781	Open in IMG/M
3300016404\|Ga0182037_10473739	Not Available	1045	Open in IMG/M
3300016404\|Ga0182037_11714551	Not Available	560	Open in IMG/M
3300016422\|Ga0182039_11339997	Not Available	649	Open in IMG/M
3300016445\|Ga0182038_10776936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	838	Open in IMG/M
3300017823\|Ga0187818_10024693	Not Available	2573	Open in IMG/M
3300017933\|Ga0187801_10158031	Not Available	885	Open in IMG/M
3300017955\|Ga0187817_10268959	Not Available	1086	Open in IMG/M
3300018433\|Ga0066667_10973825	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300018433\|Ga0066667_11479289	Not Available	599	Open in IMG/M
3300018482\|Ga0066669_10192671	Not Available	1551	Open in IMG/M
3300021168\|Ga0210406_11076838	Not Available	593	Open in IMG/M
3300021560\|Ga0126371_10376677	Not Available	1558	Open in IMG/M
3300021560\|Ga0126371_12865399	Not Available	585	Open in IMG/M
3300025898\|Ga0207692_10338395	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300025915\|Ga0207693_10871970	Not Available	691	Open in IMG/M
3300027090\|Ga0208604_1029083	Not Available	520	Open in IMG/M
3300027703\|Ga0207862_1039825	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300027874\|Ga0209465_10000244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25805	Open in IMG/M
3300027898\|Ga0209067_10327179	Not Available	847	Open in IMG/M
3300027915\|Ga0209069_10419744	Not Available	737	Open in IMG/M
3300031057\|Ga0170834_105589969	Not Available	1008	Open in IMG/M
3300031128\|Ga0170823_14863781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300031231\|Ga0170824_127212797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0240	854	Open in IMG/M
3300031231\|Ga0170824_128121221	Not Available	822	Open in IMG/M
3300031446\|Ga0170820_14871772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3552	Open in IMG/M
3300031446\|Ga0170820_15715993	Not Available	1589	Open in IMG/M
3300031474\|Ga0170818_106641707	Not Available	618	Open in IMG/M
3300031474\|Ga0170818_113415993	Not Available	532	Open in IMG/M
3300031545\|Ga0318541_10026891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2815	Open in IMG/M
3300031545\|Ga0318541_10098879	All Organisms → cellular organisms → Bacteria → Proteobacteria	1564	Open in IMG/M
3300031545\|Ga0318541_10146037	Not Available	1296	Open in IMG/M
3300031546\|Ga0318538_10091256	All Organisms → cellular organisms → Bacteria → Proteobacteria	1560	Open in IMG/M
3300031573\|Ga0310915_10222236	Not Available	1325	Open in IMG/M
3300031573\|Ga0310915_10583625	Not Available	792	Open in IMG/M
3300031573\|Ga0310915_10777024	Not Available	674	Open in IMG/M
3300031573\|Ga0310915_10781410	Not Available	672	Open in IMG/M
3300031573\|Ga0310915_11182630	Not Available	529	Open in IMG/M
3300031668\|Ga0318542_10469829	Not Available	653	Open in IMG/M
3300031708\|Ga0310686_103615634	Not Available	627	Open in IMG/M
3300031719\|Ga0306917_10377343	Not Available	1105	Open in IMG/M
3300031719\|Ga0306917_10768856	Not Available	756	Open in IMG/M
3300031719\|Ga0306917_11057646	Not Available	633	Open in IMG/M
3300031723\|Ga0318493_10771686	Not Available	541	Open in IMG/M
3300031724\|Ga0318500_10133591	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300031736\|Ga0318501_10660897	Not Available	575	Open in IMG/M
3300031744\|Ga0306918_11160438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300031747\|Ga0318502_10418524	Not Available	798	Open in IMG/M
3300031748\|Ga0318492_10258211	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300031753\|Ga0307477_10023293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4229	Open in IMG/M
3300031763\|Ga0318537_10193604	Not Available	757	Open in IMG/M
3300031768\|Ga0318509_10036084	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300031770\|Ga0318521_10534212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300031781\|Ga0318547_10866768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300031821\|Ga0318567_10474848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	710	Open in IMG/M
3300031823\|Ga0307478_10934768	Not Available	725	Open in IMG/M
3300031833\|Ga0310917_10261844	Not Available	1165	Open in IMG/M
3300031833\|Ga0310917_10466291	All Organisms → cellular organisms → Bacteria → Proteobacteria	859	Open in IMG/M
3300031833\|Ga0310917_10470179	Not Available	855	Open in IMG/M
3300031833\|Ga0310917_10669148	Not Available	704	Open in IMG/M
3300031833\|Ga0310917_10917135	Not Available	589	Open in IMG/M
3300031879\|Ga0306919_10534421	Not Available	904	Open in IMG/M
3300031879\|Ga0306919_10947106	Not Available	659	Open in IMG/M
3300031879\|Ga0306919_11197648	Not Available	577	Open in IMG/M
3300031880\|Ga0318544_10199709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300031890\|Ga0306925_10010020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9048	Open in IMG/M
3300031890\|Ga0306925_10434393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1404	Open in IMG/M
3300031890\|Ga0306925_10974711	Not Available	866	Open in IMG/M
3300031894\|Ga0318522_10136223	Not Available	922	Open in IMG/M
3300031910\|Ga0306923_10703346	Not Available	1125	Open in IMG/M
3300031942\|Ga0310916_10186638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1729	Open in IMG/M
3300031942\|Ga0310916_10817990	Not Available	784	Open in IMG/M
3300031942\|Ga0310916_11572493	Not Available	534	Open in IMG/M
3300031945\|Ga0310913_10348882	Not Available	1047	Open in IMG/M
3300031945\|Ga0310913_10978332	Not Available	594	Open in IMG/M
3300031947\|Ga0310909_11666403	Not Available	504	Open in IMG/M
3300031954\|Ga0306926_11857419	Not Available	682	Open in IMG/M
3300031954\|Ga0306926_12046467	Not Available	642	Open in IMG/M
3300031959\|Ga0318530_10489581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300032025\|Ga0318507_10397548	Not Available	600	Open in IMG/M
3300032043\|Ga0318556_10642982	Not Available	553	Open in IMG/M
3300032059\|Ga0318533_10612234	Not Available	799	Open in IMG/M
3300032076\|Ga0306924_10156696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	2608	Open in IMG/M
3300032076\|Ga0306924_11333274	Not Available	769	Open in IMG/M
3300032174\|Ga0307470_11326905	Not Available	590	Open in IMG/M
3300032180\|Ga0307471_100183447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2068	Open in IMG/M
3300032180\|Ga0307471_102463439	Not Available	658	Open in IMG/M
3300032205\|Ga0307472_100103207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1968	Open in IMG/M
3300032261\|Ga0306920_101298753	Not Available	1047	Open in IMG/M
3300033289\|Ga0310914_10191855	Not Available	1821	Open in IMG/M
3300033289\|Ga0310914_10842845	Not Available	815	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.31%
Host-Associated	Host-Associated	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.41%
Aquatic	Environmental → Aquatic	6.90%
Plants	Host-Associated → Plants	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.41%
Sediment	Environmental → Aquatic → Sediment	4.83%
Freshwater	Environmental → Aquatic → Freshwater	2.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.38%
Loam	Environmental → Terrestrial → Soil → Loam	11.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.14%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_100141231	3300004633	Tropical Forest Soil	MPMTLVLVMAFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQP*
Ga0066809_101746122	3300005168	Soil	VTLVLLMAFEISVALALGFVVGRIYQIRCDERVTLPPTARIPQP*
Ga0066684_102898123	3300005179	Soil	MILVLLMAFEISVALALGFVLGRIYQIRHDELERRDAFALPHTARIPQP*
Ga0066684_111086991	3300005179	Soil	MPMILVLLMAFEISVALALGFVLGRIYKIRSDELERGVTLAPTAHIPQP*
Ga0066671_103942253	3300005184	Soil	MPMILVLLMAFEISVALALGFVLGRIYQIRHDELQRGFTLPPAAHIPQP*
Ga0066675_104337341	3300005187	Soil	VFEIGIALALGFVVGRVYQIRRYELERGFTLPPTAHIPRP*
Ga0066388_1068260222	3300005332	Tropical Forest Soil	MPMTLILVMVFNILVAFALGFVLGRIYQIRRDELERRDSLALPPTA*
Ga0070710_101665121	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTLVLVMVFNILVALALGFLFGRIYQIRRDESERRDGFTLPPTARIPHP*
Ga0070710_106727561	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLVLMMVFEITVALALGFVVGRIYQIRRYELERGFTLPPTARIPQP*
Ga0066681_106138951	3300005451	Soil	MPIILMLLMAFEISVALALGFVLGRIYQIRHDELQRGFTLPPAAHIPQP*
Ga0066670_103635073	3300005560	Soil	MILVLLMAFEISVALALGFVLGRIYKIRSDELERGVTLAPTAHIPQP*
Ga0066705_101565862	3300005569	Soil	MILVLLMAFEISVALALGFVLGRIYQIRSDELARGFPLPPAAHIPQPC*
Ga0066654_102435253	3300005587	Soil	MPIILMLLMAFEISVALALGFVLGRIYQIRHDELQRGFRLPPAAHIPQP*
Ga0066903_1004614722	3300005764	Tropical Forest Soil	MTVQIVLMALEISVAFALGFVLGRIYQIRHDELEQRRHGFTLPPTARVPRP*
Ga0066903_1010911923	3300005764	Tropical Forest Soil	MTLVLVMIFNILVALALGFVLGRIYQIRRDELERRDGFTLPPTARIP*
Ga0066903_1017694191	3300005764	Tropical Forest Soil	MTLILLMVLEIGVALALGFVIGRIYQIRRYELERGFTLPPTAHIPRP*
Ga0066903_1054331391	3300005764	Tropical Forest Soil	QGPDAMLVLLMVSEISVALALGFVVGRIYQIRRYELERGFTLPPTARIPQP*
Ga0066903_1086925811	3300005764	Tropical Forest Soil	MTLVLMMAFNILVALGLGFLVGRIYQVRRDELERRDGFTLPSTARIPQP*
Ga0070717_111678712	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FNILVALALGFLFGRIYQIRRDESERRDGFTLPPTARIPHP*
Ga0070717_116744032	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTLVLVMAFNISVALGLGFVLGRIYQIRRYMLERSDGSALPPTGNAA*
Ga0075029_1002387522	3300006052	Watersheds	MLVLLMVFEISVALALGFVVGRIYQIRCDERVTLPPTARIPQP*
Ga0075029_1005780511	3300006052	Watersheds	MTLVLVMAFNISVTLALGFVLGRIYQIRRYMSERSDGSALPP
Ga0075026_1005628301	3300006057	Watersheds	MTLVLVMAFNISVALALGFVLGRIYQIRRYMLERSDGSALPPTASIPHP*
Ga0075026_1006724352	3300006057	Watersheds	MLVLLMVFEISVALALGFAVGRICQIRRSELERGFTLPPTARIPQP*
Ga0075014_1000646182	3300006174	Watersheds	MTLVLVMVFNILVAFVLGFVFGRIYQIRRAELERRDGFALPPTAHIPLP*
Ga0079221_116612872	3300006804	Agricultural Soil	FERKVPMTLVLVMIFNILVALALGFVFGRIYQIRRYELERRDGFPLPPTARIPQP*
Ga0075435_1009698083	3300007076	Populus Rhizosphere	MTLVPVMVFNILVALALGFLFGRIYQIRRDESERGDGFTLPPTARIPHP*
Ga0126373_113790142	3300010048	Tropical Forest Soil	MPMTLVLVMAFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPS
Ga0126373_118939891	3300010048	Tropical Forest Soil	MLVLLMVVEISVALALGFVVGRIYQIRSDELDRGFTLPPTARIPQP*
Ga0126376_101071393	3300010359	Tropical Forest Soil	MAFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQP*
Ga0126376_124283691	3300010359	Tropical Forest Soil	MLLPLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP*
Ga0126378_107202162	3300010361	Tropical Forest Soil	MLVLLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP*
Ga0126378_114921952	3300010361	Tropical Forest Soil	MPMTMVLVMAFNILVALGLGFLVGRIYQIRRDELERRDGFTLSSTARIPQS*
Ga0126378_123002751	3300010361	Tropical Forest Soil	TGIDSKRMMPMTLILVMVFNTLVALALGFLFGRIYQIRRDELERRDGFALPPTARIPQP*
Ga0126379_113498271	3300010366	Tropical Forest Soil	MLVLLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTARIPQP*
Ga0126381_1003810122	3300010376	Tropical Forest Soil	MPMTVQIVLMALEISVAFALGFVLGRIYQIRHDELEQRRHGFTLPPTARVPRP*
Ga0126381_1022399011	3300010376	Tropical Forest Soil	MLVLLMVLEISVALALGFAVGRIYQIRRYELEGGFTLPPTARIPRP*
Ga0137380_101228194	3300012206	Vadose Zone Soil	MTLLLMAFNISVALALGFVFGRIYQIRRDKLERRDSFALPPTPRVPRP*
Ga0137376_108436962	3300012208	Vadose Zone Soil	MLVLMMDFEITVALALGFVVGRIYQIRRYELERGFTLPPTARIPQP*
Ga0137377_101570441	3300012211	Vadose Zone Soil	MPMTLILVMVFNILVAFALGFVLGRIYQIRRDELERRDDLALPPTA*
Ga0137377_111026611	3300012211	Vadose Zone Soil	MLVLLMVFEITVALALGFVVGRIYQIRRYELERGFTLPPTTRIPQP*
Ga0126375_114173581	3300012948	Tropical Forest Soil	MLVLLMVFATSVALALFTAGRIYQIRSDELERGFTLPPTARIPQP*
Ga0134079_104474722	3300014166	Grasslands Soil	MPMILVLLMAFEISVALALGFVLGRIYQIRHDELERRGAFALPHTARIPQP*
Ga0134072_104346572	3300015357	Grasslands Soil	MLLMAFEISVALALGFVLGRIYQIRHDELQRGFTLPPAAHIPQP*
Ga0182036_101453055	3300016270	Soil	FSLCCRQGSYAMLVLLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTARIPQP
Ga0182041_102870333	3300016294	Soil	VMPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPRTSRIPQP
Ga0182041_107333232	3300016294	Soil	VMPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFKLPHTSRIPQP
Ga0182041_113548981	3300016294	Soil	VLVLLMVSATSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP
Ga0182041_117842773	3300016294	Soil	VALALGFAAGRIYQIRSDELERGFTLPPTARIPQP
Ga0182033_104918711	3300016319	Soil	MPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFKLPHTS
Ga0182033_115682121	3300016319	Soil	TILVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPRTSRIPQP
Ga0182032_101773864	3300016357	Soil	CCRQGSDAMLVLLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTARIPQP
Ga0182032_103140021	3300016357	Soil	MLVLLMVFATSVALALGFTAGRIYQIWSDELKRGFTLPPTARIPQP
Ga0182032_114139841	3300016357	Soil	PRPRGIDSQWRMPMTLILLMVLEIGVALALGFVVGRIYQIRRYELERGFTLPPTAHIPRP
Ga0182040_100419965	3300016387	Soil	MQMTILVLLMALEISLALALGLVFGRIYQIRRDELERGFTLPRTSRIPQP
Ga0182037_104737391	3300016404	Soil	MTLVLVMAFNILVALGLGFLVGRIYQIRRDELERRDGFTLPSTAR
Ga0182037_117145512	3300016404	Soil	LYIVRQGSDTMLVLLMVFEISVALALGFVVGRIYQIRSDELARGFALPPTAGIPRP
Ga0182039_113399973	3300016422	Soil	VFATSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP
Ga0182038_107769363	3300016445	Soil	MLLPLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTARIP
Ga0187818_100246933	3300017823	Freshwater Sediment	MWVLLMVFEISVALALGFVVGRIYQIRCDERVTLPPTARIPQP
Ga0187801_101580312	3300017933	Freshwater Sediment	MTLVLVMAFNISVALGLGFVLGRIYQIRRYMLERSDGSALPPTGNAA
Ga0187817_102689592	3300017955	Freshwater Sediment	VTLVLLMAFEISVALALGFVLGRTYQIRLDERREGFALPPTARIPHR
Ga0066667_109738251	3300018433	Grasslands Soil	IGIALALGFVVGRVYQIRRYELERGFTLPPTAHIPRP
Ga0066667_114792891	3300018433	Grasslands Soil	MILVLLMAFEISVALALGFVLGRIYQIRHDELERRDGFALPPTARIPQA
Ga0066669_101926713	3300018482	Grasslands Soil	MPIILMLLMAFEISVALALGFVLGRIYQIRHDELQRGFTLPPAAHIPQP
Ga0210406_110768381	3300021168	Soil	MTLVLVMAFNISVALALGFVFGRIYQIRRYMLERSEGFALPPTARIPHP
Ga0126371_103766771	3300021560	Tropical Forest Soil	MTVQIVLMALEISVAFALGFVLGRIYQIRHDELEQRRHGFTLPPTARVPRP
Ga0126371_128653992	3300021560	Tropical Forest Soil	MLVLLMVVEISVALALGFVVGRIYQIRSDELDRGFTLPPTARIPQP
Ga0207692_103383952	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MVFNILVALALGFLFGRIYQIRRDESERRDGFTLPPTARIPHP
Ga0207693_108719702	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VALALGFVLGRIYQIRRAELERGFTLPPTARIRQP
Ga0208604_10290831	3300027090	Forest Soil	MTLVLVMAFNISVALALGFVLGRIYQIRRYMLERSDGSALPPTASIPHPAQDQAASINPG
Ga0207862_10398252	3300027703	Tropical Forest Soil	MTVILVMVFNTLVALALALGFVLGRLYQIRRGELERDVALPPTAGHLLTGRS
Ga0209465_100002441	3300027874	Tropical Forest Soil	MTLVLVMAFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQP
Ga0209067_103271792	3300027898	Watersheds	FNILVALALGFVVGRIYQIRCDERVTLPPTARIPQP
Ga0209069_104197442	3300027915	Watersheds	MLVLLMVFEISVALALGFVVGRIYQIRCDERVTLPPTARIPQP
Ga0170834_1055899693	3300031057	Forest Soil	LLGNLAAFERNMPVTLVLLMAFEISVALALGFVVGRIYQIRCDERVTLPPTARIPQP
Ga0170823_148637811	3300031128	Forest Soil	MLVLMMVFEITVALALGFVVGRIYQIRRYELERGCTLPPTARIPQP
Ga0170824_1272127972	3300031231	Forest Soil	MTLILVMVFNILVAFALGFVLGRMYQIRRDELERRDDLALPPTA
Ga0170824_1281212212	3300031231	Forest Soil	MVFEITVALALGFVVGRIYQIRRYELERGCTLPPTARIPQP
Ga0170820_148717726	3300031446	Forest Soil	MTLVLVMAFNISVAFGLGFVLGRIYQIRSDERRDGLALPPTSRIPPP
Ga0170820_157159933	3300031446	Forest Soil	MTLVLVMAFNISVALVLGFVFGRIYQIRCDERVTLPPTARIPQP
Ga0170818_1066417071	3300031474	Forest Soil	VALALGFVVGRIYQIRRYELERGFTLPPTARIPQP
Ga0170818_1134159932	3300031474	Forest Soil	MTLVLMALEISLALALGFVLGRIYQIRSDERRDGLALPPTSR
Ga0318541_100268914	3300031545	Soil	MPMTILVLLMALEISLALALGFVFGRIYQIRRDEFERGFTLPRTSRIPQP
Ga0318541_100988793	3300031545	Soil	MPMTLVLVMAFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQP
Ga0318541_101460371	3300031545	Soil	MLLPLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTARIPQP
Ga0318538_100912563	3300031546	Soil	MAFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQP
Ga0310915_102222362	3300031573	Soil	MLVLLMVFAISVALALGFTVGRIYQIRRDELEQGFTLPPTARIPQP
Ga0310915_105836251	3300031573	Soil	LLMALEISLALALGFVFGRIYQIRRDELERGFTLPRTSRIPQP
Ga0310915_107770241	3300031573	Soil	MLVLLMVFATAVAVALALGFTAGRIYQIRSDELERGFTLPPTARIPQP
Ga0310915_107814102	3300031573	Soil	MAVILVMVFNTLVALALGFVLGRLYQIRRDELERGVALPPTARIPQP
Ga0310915_111826303	3300031573	Soil	LLMALEISLALALGFVFGRIYQIRRDELERGFKLPHTSRIPQP
Ga0318542_104698292	3300031668	Soil	REHSVAKKMPMTLILLMVFEIGVALALGFVVGRIYQIRRYELERGFTLPPTAHIPRP
Ga0310686_1036156342	3300031708	Soil	MLVLLMVFEISVALALGFAVGRIYQIRRSELERGFTLPPTARIPQP
Ga0306917_103773433	3300031719	Soil	ATSVALALGFTAGRIYQIRSDELERGFTLPPTARIPQP
Ga0306917_107688562	3300031719	Soil	MTVILVMVFNTLVALALGFVLGRLYQIRRDELERDVVVPPTARIPQP
Ga0306917_110576461	3300031719	Soil	ATSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP
Ga0318493_107716861	3300031723	Soil	LGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQP
Ga0318500_101335911	3300031724	Soil	PMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPHTPRIPQP
Ga0318501_106608971	3300031736	Soil	MLVLLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP
Ga0306918_111604381	3300031744	Soil	LVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPHTPRIPQP
Ga0318502_104185243	3300031747	Soil	MPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGF
Ga0318492_102582112	3300031748	Soil	MTLVLVMAFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQPR
Ga0307477_100232933	3300031753	Hardwood Forest Soil	MTLVLVMVFNILVAFVLGFVFGRIYQIRRAELERRDGFALPPAAHIPLP
Ga0318537_101936041	3300031763	Soil	MPMTILVLLMALEISLALALGFVFGRIYQIRRDELER
Ga0318509_100360844	3300031768	Soil	MPMTLVLVMAFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQPR
Ga0318521_105342122	3300031770	Soil	VWPERTFVMPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPRTSRIPQP
Ga0318547_108667681	3300031781	Soil	PFICTLMVWPERTFVMPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFKLPHTSRIPQP
Ga0318567_104748483	3300031821	Soil	MTILVLLMALEISLALALGFVFGRIYQIRRDELERGFKLPHTSRIPQP
Ga0307478_109347681	3300031823	Hardwood Forest Soil	MTLVLVMVFNILVAFVLGFVFGRIYQIRRAELERRDGFALPPTAHIPLP
Ga0310917_102618441	3300031833	Soil	MTLVLVMAFNILVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQP
Ga0310917_104662912	3300031833	Soil	SVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP
Ga0310917_104701793	3300031833	Soil	LVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQP
Ga0310917_106691481	3300031833	Soil	MLVLLTVFTTSVALALGFTAGRIYQIRSDELERGFTLPPTARIPQP
Ga0310917_109171351	3300031833	Soil	MLVLVMVFAISVALALGFIIGRIYQIRRDELEQGFTLRSSAYSGLE
Ga0306919_105344213	3300031879	Soil	MPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFKLPHTSRIPQP
Ga0306919_109471062	3300031879	Soil	MLVLLMVFTTSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP
Ga0306919_111976482	3300031879	Soil	LMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTARIPQP
Ga0318544_101997092	3300031880	Soil	MPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPHTPRIPQP
Ga0306925_1001002014	3300031890	Soil	MPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPRTSRIPQP
Ga0306925_104343931	3300031890	Soil	LVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPRTSRIPQP
Ga0306925_109747114	3300031890	Soil	MLVLLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTARIPQP
Ga0318522_101362233	3300031894	Soil	VLVMAFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQP
Ga0306923_107033462	3300031910	Soil	MLVLLMVFEISVALALGFVVGRIYQIRRYEVERGFTLPPTARIPQP
Ga0310916_101866381	3300031942	Soil	PMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPRTSRIPQP
Ga0310916_108179902	3300031942	Soil	MLVLLMVLEISVALALGFAVGRIYQIRRYELERGFTLPPTARIPQP
Ga0310916_115724932	3300031942	Soil	FTTSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP
Ga0310913_103488822	3300031945	Soil	MLLPLMVFATSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP
Ga0310913_109783321	3300031945	Soil	AISVALALGFTVGRIYQIRRDELEQGFTLPPTARIPQP
Ga0310909_116664031	3300031947	Soil	VFTTSVALALGFTAGRIYQIRSDELERGFTLPPTVRIPQP
Ga0306926_118574191	3300031954	Soil	MTLVLIMAFNTLAALGLGFVVGRIYQIRRDELERRDGLALPPTARIPPP
Ga0306926_120464672	3300031954	Soil	MLVLVMVFAISVALALGFIIGRIYQIRRDELEQGFTLRSRA
Ga0318530_104895811	3300031959	Soil	WPERTFVMPMTILVLLMALEISLALALGFVFGRIYQIRRDEFERGFTLPRTSRIPQP
Ga0318507_103975481	3300032025	Soil	AFNTLVALGLGFLVGRIYQIRRDELERRDGFTLPSTARIPQPR
Ga0318556_106429821	3300032043	Soil	WPERTFVMPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFKLPHTSRTPQP
Ga0318533_106122341	3300032059	Soil	GSDATSVALALGFAAGRIYQIRSDELERGFTLPPTARIPQP
Ga0306924_101566965	3300032076	Soil	TFVMPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFTLPRTSRIPQP
Ga0306924_113332741	3300032076	Soil	MLVLLMVFEISVALALGFVVGRIYQIRRYELERGFTLPTTARIPQP
Ga0307470_113269051	3300032174	Hardwood Forest Soil	MTLVLVMVFNILVALALGFLFGRIYQSRRDELERRNGFALPPTARIPRP
Ga0307471_1001834472	3300032180	Hardwood Forest Soil	MTLVLVMVFNILVALALGFLFGRIYQIRRDELERRNGFALPPTARIPRP
Ga0307471_1024634392	3300032180	Hardwood Forest Soil	MTLVLVMIFNILVALALGFVFGRIYQIRRDELERRNGFTLPPTARIPQP
Ga0307472_1001032072	3300032205	Hardwood Forest Soil	MTLVPVMVFNILVALALGFLFGRIYQIRRDELERRNGFALPPTARIPQP
Ga0306920_1012987532	3300032261	Soil	MLVLLMVFEISVALALGFVVGRIYQIRRYELERGFTLPPTARIPQP
Ga0310914_101918553	3300033289	Soil	TSVALALGFVLGRIYQIRFDLLERRAEPPVAGIPQP
Ga0310914_108428451	3300033289	Soil	MPMTILVLLMALEISLALALGFVFGRIYQIRRDELERGFTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050583

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences