NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F050578

Metagenome / Metatranscriptome Family F050578

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F050578
Family Type Metagenome / Metatranscriptome
Number of Sequences 145
Average Sequence Length 63 residues
Representative Sequence MVDNPVWEICERVAEVQALLHDHVECGKHSAADVVAKAQAVLSEPELLRAMFDVGYFPPNTPPD
Number of Associated Samples 69
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.17 %
% of genes near scaffold ends (potentially truncated) 22.76 %
% of genes from short scaffolds (< 2000 bps) 64.14 %
Associated GOLD sequencing projects 61
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (51.034 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(29.655 % of family members)
Environment Ontology (ENVO) Unclassified
(26.207 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(80.690 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.74%    β-sheet: 0.00%    Coil/Unstructured: 53.26%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF02586SRAP 9.03
PF04964Flp_Fap 3.47
PF04392ABC_sub_bind 2.78
PF01381HTH_3 2.78
PF01068DNA_ligase_A_M 2.08
PF13231PMT_2 1.39
PF13185GAF_2 1.39
PF13202EF-hand_5 1.39
PF05589DUF768 1.39
PF13229Beta_helix 1.39
PF03775MinC_C 1.39
PF13545HTH_Crp_2 1.39
PF06568DUF1127 0.69
PF13365Trypsin_2 0.69
PF02265S1-P1_nuclease 0.69
PF00313CSD 0.69
PF11974bMG3 0.69
PF11794HpaB_N 0.69
PF04909Amidohydro_2 0.69
PF02518HATPase_c 0.69
PF07883Cupin_2 0.69
PF13676TIR_2 0.69
PF07690MFS_1 0.69
PF07813LTXXQ 0.69
PF07927HicA_toxin 0.69
PF00089Trypsin 0.69
PF07929PRiA4_ORF3 0.69
PF00589Phage_integrase 0.69
PF02661Fic 0.69
PF01355HIPIP 0.69
PF02371Transposase_20 0.69
PF01435Peptidase_M48 0.69
PF00486Trans_reg_C 0.69
PF02397Bac_transf 0.69
PF06147DUF968 0.69
PF01035DNA_binding_1 0.69
PF10987DUF2806 0.69
PF12071DUF3551 0.69
PF00072Response_reg 0.69
PF03401TctC 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 9.03
COG3847Flp pilus assembly protein, pilin FlpExtracellular structures [W] 3.47
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 2.78
COG3678Periplasmic chaperone Spy, Spy/CpxP familyPosttranslational modification, protein turnover, chaperones [O] 2.78
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 2.08
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 2.08
COG0850Septum site-determining protein MinCCell cycle control, cell division, chromosome partitioning [D] 1.39
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 0.69
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 0.69
COG2148Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)Cell wall/membrane/envelope biogenesis [M] 0.69
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.69
COG3547TransposaseMobilome: prophages, transposons [X] 0.69
COG3695Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domainTranscription [K] 0.69
COG5457Uncharacterized conserved protein YjiS, DUF1127 familyFunction unknown [S] 0.69


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A51.03 %
All OrganismsrootAll Organisms48.97 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10094966Not Available1330Open in IMG/M
3300002245|JGIcombinedJ26739_100514364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1074Open in IMG/M
3300004091|Ga0062387_101598873Not Available526Open in IMG/M
3300004092|Ga0062389_101852731Not Available782Open in IMG/M
3300005591|Ga0070761_10431445Not Available807Open in IMG/M
3300005602|Ga0070762_10063370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2064Open in IMG/M
3300005610|Ga0070763_10863523Not Available537Open in IMG/M
3300005712|Ga0070764_10088169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1642Open in IMG/M
3300005921|Ga0070766_10002175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria9757Open in IMG/M
3300005921|Ga0070766_10325957Not Available992Open in IMG/M
3300005921|Ga0070766_10702378Not Available685Open in IMG/M
3300005921|Ga0070766_11153686Not Available535Open in IMG/M
3300005994|Ga0066789_10280317Not Available698Open in IMG/M
3300005995|Ga0066790_10254504Not Available749Open in IMG/M
3300006052|Ga0075029_100038110Not Available2752Open in IMG/M
3300006052|Ga0075029_100690440Not Available688Open in IMG/M
3300006174|Ga0075014_100196716All Organisms → cellular organisms → Bacteria → Proteobacteria1014Open in IMG/M
3300006176|Ga0070765_100059132Not Available3166Open in IMG/M
3300006176|Ga0070765_100074300All Organisms → cellular organisms → Bacteria2863Open in IMG/M
3300006176|Ga0070765_100326932All Organisms → cellular organisms → Bacteria1422Open in IMG/M
3300006176|Ga0070765_100381927Not Available1313Open in IMG/M
3300006176|Ga0070765_100401901Not Available1279Open in IMG/M
3300006176|Ga0070765_100613382Not Available1026Open in IMG/M
3300006176|Ga0070765_101050931Not Available770Open in IMG/M
3300006176|Ga0070765_101375572Not Available665Open in IMG/M
3300006893|Ga0073928_10716263All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae697Open in IMG/M
3300009521|Ga0116222_1091366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1312Open in IMG/M
3300009521|Ga0116222_1321023Not Available670Open in IMG/M
3300009523|Ga0116221_1116106Not Available1176Open in IMG/M
3300009523|Ga0116221_1214789All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300009523|Ga0116221_1431214Not Available575Open in IMG/M
3300009524|Ga0116225_1161183Not Available1021Open in IMG/M
3300009524|Ga0116225_1257516Not Available782Open in IMG/M
3300009524|Ga0116225_1284376Not Available739Open in IMG/M
3300009524|Ga0116225_1509879All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300009525|Ga0116220_10064703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1531Open in IMG/M
3300009683|Ga0116224_10114097Not Available1308Open in IMG/M
3300009683|Ga0116224_10282697All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales790Open in IMG/M
3300009700|Ga0116217_10939385Not Available530Open in IMG/M
3300009700|Ga0116217_10942788Not Available529Open in IMG/M
3300009700|Ga0116217_10974071Not Available519Open in IMG/M
3300009839|Ga0116223_10706529All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300010379|Ga0136449_100117857All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5354Open in IMG/M
3300010379|Ga0136449_100129136Not Available5042Open in IMG/M
3300010379|Ga0136449_100132029Not Available4972Open in IMG/M
3300010379|Ga0136449_100231328Not Available3461Open in IMG/M
3300010379|Ga0136449_100244814All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae3339Open in IMG/M
3300010379|Ga0136449_100255184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3252Open in IMG/M
3300010379|Ga0136449_100299886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2932Open in IMG/M
3300010379|Ga0136449_100366260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2579Open in IMG/M
3300010379|Ga0136449_100627666Not Available1823Open in IMG/M
3300010379|Ga0136449_100945408Not Available1396Open in IMG/M
3300010379|Ga0136449_103661742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium581Open in IMG/M
3300010880|Ga0126350_10516284Not Available837Open in IMG/M
3300012019|Ga0120139_1049010Not Available1005Open in IMG/M
3300014156|Ga0181518_10003640All Organisms → cellular organisms → Bacteria → Proteobacteria14128Open in IMG/M
3300014156|Ga0181518_10013950All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5919Open in IMG/M
3300014158|Ga0181521_10019966All Organisms → cellular organisms → Bacteria5644Open in IMG/M
3300014158|Ga0181521_10295352Not Available834Open in IMG/M
3300014159|Ga0181530_10001983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria25077Open in IMG/M
3300014165|Ga0181523_10372073All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales799Open in IMG/M
3300014199|Ga0181535_10649021Not Available603Open in IMG/M
3300014200|Ga0181526_10049254Not Available2691Open in IMG/M
3300014200|Ga0181526_10049254Not Available2691Open in IMG/M
3300014200|Ga0181526_10068141Not Available2266Open in IMG/M
3300014200|Ga0181526_10148406Not Available1503Open in IMG/M
3300014501|Ga0182024_10041339All Organisms → cellular organisms → Bacteria → Proteobacteria7570Open in IMG/M
3300014501|Ga0182024_10045920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7040Open in IMG/M
3300014501|Ga0182024_10060020All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5883Open in IMG/M
3300014501|Ga0182024_10124580All Organisms → cellular organisms → Bacteria → Proteobacteria3678Open in IMG/M
3300014501|Ga0182024_10223452Not Available2550Open in IMG/M
3300014501|Ga0182024_10232369Not Available2489Open in IMG/M
3300014501|Ga0182024_10319395All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2043Open in IMG/M
3300014501|Ga0182024_10750958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR651196Open in IMG/M
3300014501|Ga0182024_12111308Not Available619Open in IMG/M
3300014638|Ga0181536_10107330Not Available1567Open in IMG/M
3300020582|Ga0210395_10160957All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1678Open in IMG/M
3300020582|Ga0210395_10202357Not Available1489Open in IMG/M
3300020582|Ga0210395_11442867Not Available501Open in IMG/M
3300020583|Ga0210401_10348297All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1343Open in IMG/M
3300020583|Ga0210401_11267490Not Available595Open in IMG/M
3300021088|Ga0210404_10188032All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1102Open in IMG/M
3300021181|Ga0210388_10263304All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1514Open in IMG/M
3300021401|Ga0210393_11485327All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae540Open in IMG/M
3300021402|Ga0210385_10633783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria816Open in IMG/M
3300021406|Ga0210386_11534553All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300021407|Ga0210383_10357268All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1259Open in IMG/M
3300021420|Ga0210394_10007580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria11393Open in IMG/M
3300021420|Ga0210394_10019226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6376Open in IMG/M
3300021420|Ga0210394_10037584All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4296Open in IMG/M
3300021432|Ga0210384_10145329All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2128Open in IMG/M
3300021477|Ga0210398_10013898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7021Open in IMG/M
3300021477|Ga0210398_10053263All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3319Open in IMG/M
3300021478|Ga0210402_11224333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria678Open in IMG/M
3300021479|Ga0210410_10375158All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X141275Open in IMG/M
3300022511|Ga0242651_1017181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales731Open in IMG/M
3300022525|Ga0242656_1083433Not Available603Open in IMG/M
3300022532|Ga0242655_10277687Not Available539Open in IMG/M
3300022557|Ga0212123_10571701Not Available719Open in IMG/M
3300024225|Ga0224572_1052173Not Available761Open in IMG/M
3300024227|Ga0228598_1027519All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14621118Open in IMG/M
3300026294|Ga0209839_10245184Not Available563Open in IMG/M
3300027439|Ga0209332_1014658Not Available1538Open in IMG/M
3300027641|Ga0208827_1146615Not Available659Open in IMG/M
3300027641|Ga0208827_1151902Not Available643Open in IMG/M
3300027854|Ga0209517_10022659All Organisms → cellular organisms → Bacteria → Proteobacteria5703Open in IMG/M
3300027854|Ga0209517_10055663All Organisms → cellular organisms → Bacteria → Proteobacteria2936Open in IMG/M
3300027879|Ga0209169_10029956All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2896Open in IMG/M
3300027884|Ga0209275_10089356All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1557Open in IMG/M
3300027889|Ga0209380_10002537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria11630Open in IMG/M
3300027889|Ga0209380_10829795Not Available522Open in IMG/M
3300027898|Ga0209067_10796164Not Available551Open in IMG/M
3300027908|Ga0209006_10131765All Organisms → cellular organisms → Bacteria2202Open in IMG/M
3300028906|Ga0308309_10082506All Organisms → cellular organisms → Bacteria2436Open in IMG/M
3300028906|Ga0308309_10322693Not Available1311Open in IMG/M
3300028906|Ga0308309_10504723Not Available1046Open in IMG/M
3300028906|Ga0308309_10867315Not Available784Open in IMG/M
3300031090|Ga0265760_10008773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2890Open in IMG/M
3300031090|Ga0265760_10019238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1967Open in IMG/M
3300031090|Ga0265760_10019858Not Available1937Open in IMG/M
3300031090|Ga0265760_10040143Not Available1394Open in IMG/M
3300031090|Ga0265760_10055030All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1202Open in IMG/M
3300031128|Ga0170823_12110615All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium562Open in IMG/M
3300031231|Ga0170824_104553216Not Available513Open in IMG/M
3300031231|Ga0170824_109344269Not Available536Open in IMG/M
3300031708|Ga0310686_100310522Not Available519Open in IMG/M
3300031708|Ga0310686_108676866All Organisms → cellular organisms → Bacteria → Proteobacteria3497Open in IMG/M
3300031708|Ga0310686_109513299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3456Open in IMG/M
3300031708|Ga0310686_110856913All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales748Open in IMG/M
3300031708|Ga0310686_115105293Not Available4672Open in IMG/M
3300031708|Ga0310686_118011148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae → Waterburya → Waterburya agarophytonicola2337Open in IMG/M
3300031708|Ga0310686_119902590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B122479Open in IMG/M
3300031938|Ga0308175_100390599All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1451Open in IMG/M
3300031996|Ga0308176_10234591Not Available1749Open in IMG/M
3300032160|Ga0311301_10096856Not Available5819Open in IMG/M
3300032160|Ga0311301_10154326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4136Open in IMG/M
3300032160|Ga0311301_10212811Not Available3281Open in IMG/M
3300032160|Ga0311301_10250496All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2922Open in IMG/M
3300032160|Ga0311301_10285002All Organisms → cellular organisms → Bacteria → Proteobacteria2668Open in IMG/M
3300032160|Ga0311301_10384389All Organisms → cellular organisms → Bacteria2163Open in IMG/M
3300032160|Ga0311301_10430514Not Available2000Open in IMG/M
3300032160|Ga0311301_10643240Not Available1512Open in IMG/M
3300032160|Ga0311301_10665176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1477Open in IMG/M
3300032160|Ga0311301_10866929Not Available1224Open in IMG/M
3300032160|Ga0311301_12810320Not Available531Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil29.66%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil16.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.17%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog8.28%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.28%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost6.21%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.76%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.07%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.07%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.07%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.38%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.38%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.38%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.69%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.69%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022511Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027641Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1009496623300000567Peatlands SoilMVENPLWEICERVAEVQALLHDHIECGKHSAADVVAKAQAVLTEPELLRAMFDVGYFPPNTPPALT*
JGIcombinedJ26739_10051436433300002245Forest SoilMASNPVWEICERMAEVQALLDDHLVGGKHTAADVVAKSQAVLSEPSLLRAMFDVGYFPSNASPDNIK
Ga0062387_10159887323300004091Bog Forest SoilVGNLRSRVAEVQALLDDHIAGDKHSAADVVAKAQAVLSESALLRAMFDVGYFPPNTPP
Ga0062389_10185273123300004092Bog Forest SoilLKGFDSRQSGVGNLRSRVAEVQALLDDHIAGDKHSAADVVAKAQAVLSESALLRAMFDVGYFPPNTPPP*
Ga0070761_1043144513300005591SoilMASNPVWEICERMAEVQALLHDHVECGKHTDADVVAKAQAVLSEPELLRAMFDVGYFPPNTPPG*
Ga0070762_1006337033300005602SoilMKESVWEICERVAEVQALLHDHVTGGKLSPADVVAKAQAVLSEAALLRAMFDVGYFPPNTPPDE*
Ga0070763_1086352323300005610SoilMVAESGESLSRSLGNLRERMAEVQALLHDHAECGKHTAADVVAKAQAVLSEPELLRAMFDVGYFPP
Ga0070764_1008816923300005712SoilMKESVWEICERVAEVQALLHDHVTGGKLSPADVVAKAQAVLSEAALLRAMFDVGYFPPNTPPPDDLRRPI*
Ga0070766_1000217593300005921SoilMHQLFSPSSTRKPMVHNPMWSICERMAEVQTLLDDHIAGGKHTAADVISKAQAILSEPALQRAMFDVGYFPTNTPPVD*
Ga0070766_1032595713300005921SoilICERVAEVQALLDDHVAGGKHSDADVVANAQAVLSESELLRAMFDVGYFPAN*
Ga0070766_1070237823300005921SoilMASNPVWEICERMAEVQALLHDHAECGKHTAADVVAKAQAVLSEPELLRAMFDVGYFPPNTPPG*
Ga0070766_1115368613300005921SoilMGDNPVWEIWSAAEVQALLDDHIAGGKHSAAAVVAGAQAVLSEIELLRGMFDVGYFPPNTPP*
Ga0066789_1028031733300005994SoilMLIDKVTIWGPPAVDNPVWEICERVAEVQALLDDHVAGGRHSAADVVAKAQAVLSEAELLRAMFDVGYFPPNTAPAG*
Ga0066790_1025450413300005995SoilMATNPIWEIFERVAEVQALLNDHIAGGKHSAAEVVAKAQAVSESELLQTMFDVGYFPPNTAPAG*
Ga0075029_10003811043300006052WatershedsMADNPAWQICERVAEVQALLHDHVECGKHLPSDVVAKAQAVLCEPELLRAMFDVAYFPPNTPPDE*
Ga0075029_10069044023300006052WatershedsMVSNPVWEICERVAEVQALLDDHVAGGKHSAADVVARAQAVLSESELLRAMFDVG
Ga0075014_10019671613300006174WatershedsVLAICERVAEVQALLHDHIEGGKHSAADVTALAQAVLSEAELLRAMFDVGYFAANTPPDE
Ga0070765_10005913263300006176SoilMPSNPMWAICERVAEVQALLDGLAGGTHTPADVLANAQAILSEPALLRAMFDVGYFPPNTRRVD*
Ga0070765_10007430023300006176SoilMKESVWEICERVAEVQALLDDHIAGGKHSAADVVAKAQAVLSESELLRAMFDVGYFPPNTPPDGTR*
Ga0070765_10032693213300006176SoilMADNPVWENCARMAEVQALLHDHVECGKHSAADVVAKAQAVLSESELLRAMFDVGYFPPNTPPID*
Ga0070765_10038192733300006176SoilMVDNPTWAICERVAEVQALLHDHVAGGKRLAADVVAKAQAVLIEPELLQAMFDVGYFPPNTPPPTGR*
Ga0070765_10040190113300006176SoilMASNPVWEICERMAEVQALLHDHAECGKHSPADVVAKAQAVLTEPDLLRAMLDVG
Ga0070765_10061338213300006176SoilMASNPVWEICERMAEVQALLHDHTECGKHTPADVVAKAQAVLSEPELLRAMFDVGYFP
Ga0070765_10105093123300006176SoilICERVAEVQALLDDHIAGGKHTAADVVAKAQAILTESELLRAMFDVGCFPPNTPPVECS*
Ga0070765_10137557223300006176SoilMVDNPVWEICERVAKVQVLLDDHIAGGKHLAADVVAKAQAVLSESELLRAMFDRPLDGIVS*
Ga0073928_1071626323300006893Iron-Sulfur Acid SpringVLAICERVAEVQALLHDYLECGKHSAADVIAKAQAVLSESELLRAMFEVGNFPPDTPNE*
Ga0116222_109136623300009521Peatlands SoilMTDIPVWDICERLTEVQALLHDHIERGKHSAADLVAKVQAVPSESELLRAIFDVGCFPPNTPPPS*
Ga0116222_132102313300009521Peatlands SoilMVDNPVWEICERVAEVQALLDDHLAGGKHSAAEVVAKAQAVLSEPELLRAMFDVGYFPPNMPPE*
Ga0116221_111610633300009523Peatlands SoilWDICERLTEVQALLHDHIERGKHSAADLVAKVQAVPSESELLRAIFDVGCFPPNTPPPS*
Ga0116221_121478923300009523Peatlands SoilVWEICEREAEVQALLDDHVAGGNHSAADVVAKAQAVLSEAELLRAMFDVGYFPPNTPPK*
Ga0116221_143121413300009523Peatlands SoilMVDNPVWEICERVPEVQALLHDHIECDKDSAADVVVKAQAILLRAMFNVG*
Ga0116225_116118333300009524Peatlands SoilVSSHFSRADERVAEVQALLDDHIAGGKHSAADVVAKAQAVLAEPELLWAMFDVGYFPPNTPPDR*
Ga0116225_125751613300009524Peatlands SoilMVENPLWEICERVAEVQALLHDHIECGKHSAADVVAKAQAVLTEPELLRAMFDVGYFPPNTPPDR*
Ga0116225_128437613300009524Peatlands SoilMVSNPVWKICERVAEVQALLDDQLAGGKHSAADVVAKAQAQAVRSEAELLQAMFDVGYFPPSMPPDE*
Ga0116225_150987913300009524Peatlands SoilMVDNPVWEICERVPEVQALLDDHVAGGKHSAADVVAKAQVVLSDSELLRAMFDVGYFPPSTLCDARHSVERPHLV
Ga0116220_1006470333300009525Peatlands SoilMVDNPVWEICERVAEVQALLDDHLASGKHSAADVVAKAQAVLTVSELLRAMFDVGYFPPNTPPPTG*
Ga0116224_1011409733300009683Peatlands SoilVSSHFSRADERVAEVQALLDDHIAGGKHSAADVVAKAQAVLAEPELLWAMFDVGYFPPNR
Ga0116224_1028269733300009683Peatlands SoilVAEVQALLDDHIAGGKHSAADVVAKAQAVLSEVELLRAMFDVGYFPPNTPPDERTAAIREPA*
Ga0116217_1093938513300009700Peatlands SoilMVDNPVWEICERVAEVQALLDDHLAGGKHTAADVFAKAQAVLSEAKLLRAMF
Ga0116217_1094278813300009700Peatlands SoilMVDNLAWKICERVAEVQAPLHHHIKCGKHSATDVVAKAQTVLAEPDLLRAMFD
Ga0116217_1097407113300009700Peatlands SoilIWEICERVAEVQALLDDHLAGGKHTAADVVAKAQAVLSEAELLRAMFDVGYFPPNTPPDE
Ga0116223_1070652923300009839Peatlands SoilMVDNPVWEICERVPEVQALLDDHVAGGKHSAADVVAKAQVVLSDSELLRAMFDVGYFPPNTLPPDD*
Ga0136449_10011785773300010379Peatlands SoilMVSNPVWEICERVAEVQALLHDHAECGKHTAADVVAKAQAVLTEPELLRAMFDVGYFPPNTPPGTRF*
Ga0136449_10012913653300010379Peatlands SoilMVSNPVWKICERVAEVQALLDDQLAGGKHSAADVVAKAQAVRSEAELLQAMFDVGYFPPSMPPDE*
Ga0136449_10013202973300010379Peatlands SoilMVSNPVWEICERVAEVQALLHDHTEGGKHSAADVVARAQAVLSEAELLRAMFVVGYFPPNTPPGTRF*
Ga0136449_10023132863300010379Peatlands SoilMVDNLAWKICERVAEVQAPLHHHIKCGKHSATDVVAKAQTVLAEPDLLRAMFDVGYFPPNTPPVE*
Ga0136449_10024481443300010379Peatlands SoilMVDNPIWEICERVAEVQALLDDHLAGGKHTAADVVAKAQAVLSEAELLRAMFDVGYFPPNTPPK*
Ga0136449_10025518433300010379Peatlands SoilMVDNPVWEICERVAEVQALLDDHLASGKHSAADVVAKAQAVLTVSELLRAMFDVGYFPPNTPPFTR*
Ga0136449_10029988623300010379Peatlands SoilMVSNPMWEICERVAEVQALLDDHLAGGKHTAADVFAKAQAVLSEAKLLRAMFVVGYFPTNTPPWPGTPGG*
Ga0136449_10036626043300010379Peatlands SoilVAEVQALLYDHIECSKHTAADVVVNAQAVLTEPPELLRAMFDVGYFPPNTPPD*
Ga0136449_10062766633300010379Peatlands SoilMADNPLWEICERVAEVQALLDDHIAGGKHSAADVVAKAQAVLSEPELLRAMFDVGYFPPNTSSAEWISFNGISLS*
Ga0136449_10094540833300010379Peatlands SoilVAEVQALLHDHVECGKHSAADMVAKAQVVLSEPELLRAMFDVGYFPPNTPPQD*
Ga0136449_10366174223300010379Peatlands SoilMASNPVWEICERVAEVQALLHDHVECGKHTAPDVVAKAQAVLSESEMLRAMFDVGYFPPNTPAGTRF*
Ga0126350_1051628413300010880Boreal Forest SoilLTIRLREICERVAEVQALLDDHVAGGKHSAADVVAKAQAVLSEAELLRAMFDVGYFPPNTPPDE*
Ga0120139_104901023300012019PermafrostMIDNPMWKICDRVAEVQALLHDHIDGGKHTAADVVAKAQAVLSESELLRAMFDVGYFPPNTPPDE*
Ga0181518_10003640113300014156BogMADNPVWAICERVAEVQALLHDYLEAGKAMTAGHVVAKAQAVLSEPELLRAMFDVGYFPPNTPPQD*
Ga0181518_1001395063300014156BogMRGRMIDNPVWAICECVAEVQALQHDHIECGKHSAPDVVAKAQAVLSESELLRAMFDVGYFSLNTPPGD*
Ga0181521_1001996663300014158BogVSSHFSRADERVAEVQALLDDHIAGGKHSAADVVAKAQAVLAEPELLWAMFDVGYFPPN
Ga0181521_1029535223300014158BogMVENPLWELCERVAEVQSLLHDHIECGKHSAADVVAKAQAVLTEPELLRAMFDVGYFPPNTPPALT*
Ga0181530_1000198393300014159BogMVDNPAWEICERVAEVQALLDDHIAGGKHSAADVVAKAQAVLSEVELLRAMFDVGYFPPNTPPVE*
Ga0181523_1037207313300014165BogMTENPMWEICERVAEVQALLDDHLAGGEHSAADVAAKAVLSEAELLRAMFDVGYFPANTPPGGST
Ga0181535_1064902113300014199BogVSSHFSRADERVAEVQALLDDHIAGGKHSAADVVAKAQAVLAEPELLWAMFDVGYFPPNTPPQE*
Ga0181526_1004925423300014200BogVAICERVAEVQALLHDHIECGKHSAADVVAKVQAVLSEPELLRAMFDVGYFPPNTPPGR*
Ga0181526_1004925443300014200BogMVDNPAWEICERVAEVQALLDDHIAGGKHTAADLVAKAQAVLSKAELLRAMFDVGYFLPNTPPPVE*
Ga0181526_1006814113300014200BogICECVAEVQALQHDHIECGKHSAPDVVAKAQAVPSESELLRAMFDVGYFSLNTPPGD*
Ga0181526_1014840613300014200BogMADNPVWAICERVAEVQALLHDYLEAGKAMTAGHVVAKAQAVLSEPELLRAMFDVGYFPPNTPPQ
Ga0182024_1004133963300014501PermafrostMTDNPLWEICERVAEIQALLDDHLAGGKHSAADVVGKAQAVLSEPELLRAMFDVGYFPPNTPPYVSIFDQTATA*
Ga0182024_1004592073300014501PermafrostMFDNPVWEICERVAEVQALLDDHLAGGKHSAADLVAKAQAVLSEPELLRAMFDVGYFPPNTPPPNG*
Ga0182024_1006002093300014501PermafrostMVDNPVWEICERVAEVQALLHDHVECGKHSAADVVAKAQAVLSEPELLRAMFDVGYFPPNTPPD*
Ga0182024_1012458053300014501PermafrostMTDNPTWTICERVAEVQALLHDHVACGKHSAADVVAKAQAVLSESELSRAMFDVGYFPPNTPPS*
Ga0182024_1022345253300014501PermafrostVLAICERVAEVQALLHDYLECGKHSAADVIAKAQAVLSESELLRAMFDVGNFPPNTPPDD
Ga0182024_1023236933300014501PermafrostMVDNPVWEICERVAEVQALLDDHLAGGKHSAADVVAKAQAVLAEMFDVGYFPPNTSPVK*
Ga0182024_1031939513300014501PermafrostREHAPKEEPMADNPNCAICERVAEVQALLDDQLASGKHSAAEVVAKAQAVLSESALRKMFNVGYFPPNTPPQ*
Ga0182024_1075095823300014501PermafrostMVGNPMWVICERVARVQALLDDHLTGGKHTAGDVVAKAQAVLSEPALLRAMFDVGYFPPNTPV*
Ga0182024_1211130823300014501PermafrostMVDNPAWKICERVAEVQALLHDHVECGKHSAAEVVAKAQAVLSEAPPLRAMFDVGYFPPNTPPVE*
Ga0181536_1010733013300014638BogCEHVAEVQALLHDYLECGKHSAADVIAKAQAVLSESELLRAMFDVGNFPPNTPNE*
Ga0210395_1016095743300020582SoilMWAICERVAEVQALLDGLAGGKHTPADVLANAQAILSEPALLRAMFDVGYFPPNTRRVD
Ga0210395_1020235723300020582SoilMGDNPVWEIWSAAEVQALLDDHIAGGKHSAAAVVAGAQAVLSEIELLRGMFDVGYFPPNTPP
Ga0210395_1144286713300020582SoilMASNPVWEICERLAEVQALLHDHAERGKHTAADVVAKAQAVLSEPELLRAMFVVGYFPPNTPPGG
Ga0210401_1034829743300020583SoilMASNPMWAICERVAEVQALLDGLAGGKHTPADVLANAQAILSEPALLRAMFDVGYFPPNTRRVD
Ga0210401_1126749013300020583SoilMASNPVWEICERMAEVQALLHDHIECGKHSAADVVAKAQAVLSEPELLRALFDVGYFPPN
Ga0210404_1018803223300021088SoilMWAICERVAEVQALLDGLAGGKHTPADVLANAQAILSEPALLRAMFDVGYFPPNTPPGE
Ga0210388_1026330433300021181SoilMKESVWEICERVAEVQALLHDHVTGGKLSPADVVAKAQAVLSEAALLRAMFDVGYFPPNTPPVE
Ga0210393_1148532723300021401SoilMKESVWEICERVAEVQALLHDHVTGGKLSPADVVAKAQAVLSEAALLRAMFDVGYFPPNT
Ga0210385_1063378313300021402SoilMASNPMWAICERVAEVQALLDGLAGGKHTPADVLANAQAILSEPALLRAMFDVGYFPPNTPP
Ga0210386_1153455323300021406SoilICERVAEVQALLDEHLAGGKRSAAEVVAKAQAVLSESALLRAMFDVGYFPPNTPLG
Ga0210383_1035726823300021407SoilMASNPMWAICERVAEVQALLDGLAGGKHTPADVLANAQAILSEPALLRAMFDVGYFPPNTPPGE
Ga0210394_10007580193300021420SoilMADNPAWAICERVAEVQALLDDHLAGGKDSAADVVAKAQTVLSETELLRAMFDVGYFPPNTPPPG
Ga0210394_10019226123300021420SoilMGDNPVWEIWSAAEVQALLDDHIAGGKHSAAAVVAGAQAVLSEIELLRAMFDVGYFPPNTPP
Ga0210394_1003758473300021420SoilMPSNPMWAICERVAEVQALLDGLAGGTHTPADVLANAQAILSEPALLRAMFDVGYFPPNTRRVD
Ga0210384_1014532933300021432SoilMSDEAVFAICERVAEVQALLHDHLECGKHLAVEVVAKMQAVLSESELLRAMSQVGYFQAPLKEFDGSTAL
Ga0210398_1001389833300021477SoilMADSPVRAICERVAEVQALLHNHIECGKHSAADVVAKAQSVLSEAELLRAMFNVGYFMPNTPPD
Ga0210398_1005326333300021477SoilMSEPVFAICERVAEVQALLHDHIECGKHSAADVVATAQAVLSEPELLRAMFDVGYFPPNTPPPTE
Ga0210402_1122433323300021478SoilMVDNPVWEICERVAEVQAPLDDHIPGGNHSAADVVAKAQAVLSEAELLRAMFDVGYFPPNKPPQ
Ga0210410_1037515833300021479SoilALAICERVAEVQALLDEHLAGGQHSAAEVVAKAQAVLSEAALLRAMFDVGYFPPNRPIG
Ga0242651_101718113300022511SoilMKESVWEICERVAEVQALLHDHVTGGKLSPADVVAKAKAVLSEAALLRAMFDVGYFPPNTPTG
Ga0242656_108343323300022525SoilMASNPVWEICERMAEVQALLHDHAECGKHTAADVVAKAQAVLSEPELLRAMFDVG
Ga0242655_1027768713300022532SoilMPSNPMWAICERVAEVQALLDGLAGGTHTPADVLANAQAILSEPALLRAMFDVGYFPPNTPPE
Ga0212123_1057170113300022557Iron-Sulfur Acid SpringVLAICERVAEVQALLHDYLECGKHSAADVIAKAQAVLSESELLRAMFEVGNFPPDTPNE
Ga0224572_105217313300024225RhizosphereMATNPVWEICEHMAEVQALLHDHAECGKHTAADVVAKAQAVLSEPELLRAMFDVGYFPPDKS
Ga0228598_102751913300024227RhizospherePMWAICERVAEVQALLDGHLAGGKHTPADVLANAQAILSEPALLRAMVDVG
Ga0209839_1024518423300026294SoilMATNPIWEIFERVAEVQALLNDHIAGGKHSAAEVVAKAQAVSESELLQTMFDVG
Ga0209332_101465823300027439Forest SoilVLAICERVAEVQALLHDYLEAGKQTTAANVIAKAQAVLSESELLRAMFDVGYFPPNTPPD
Ga0208827_114661513300027641Peatlands SoilMVDNPAWEICERVAEVQALLDDHVAGGKHSAAEVVAKAQAVLSEPELLRAMFDV
Ga0208827_115190223300027641Peatlands SoilWDICERLTEVQALLHDHIERGKHSAADLVAKVQAVPSESELLRAIFDVGCFPPNTPPPS
Ga0209517_1002265943300027854Peatlands SoilMTDIPVWDICERLTEVQALLHDHIERGKHSAADLVAKVQAVPSESELLRAIFDVGCFPPNTPPPS
Ga0209517_1005566343300027854Peatlands SoilMVENPLWEICERVAEVQALLHDHIECGKHSAADVVAKAQAVLTEPELLRAMFDVGYFPPNTPPALT
Ga0209169_1002995643300027879SoilMKESVWEICERVAEVQALLHDHVTGGKLSPADVVAKAQAVLSEAALLRAMFDVGYFPPNTPPPDDLRRPI
Ga0209275_1008935623300027884SoilMKESVWEICERVAEVQALLHDHVTGGKLSPADVVAKAQAVLSEAALLRAMFDVGYFPPNTPPDE
Ga0209380_1000253793300027889SoilMHQLFSPSSTRKPMVHNPMWSICERMAEVQTLLDDHIAGGKHTAADVISKAQAILSEPALQRAMFDVGYFPTNTPPVD
Ga0209380_1082979523300027889SoilMASNPVWEICERMAEVQALLHDHAECGKHTAADVVAKAQAVLSEPELLRAMFDVGYFPPNTPPG
Ga0209067_1079616413300027898WatershedsMADNPLWKICERVAELQALLDDHLAGGKHSAADVVAKAQAVLSEPELLQAMFDVGYFPPKTRRRRTKVRSAGLRL
Ga0209006_1013176543300027908Forest SoilVGICKRVAEIQALLYDHLAGGKHSAADMVAKAQAVLSKPELLRAMFNVGYFSPNAGVPE
Ga0308309_1008250623300028906SoilMKESVWEICERVAEVQALLDDHIAGGKHSAADVVAKAQAVLSESELLRAMFDVGYFPPNTPPDGTR
Ga0308309_1032269323300028906SoilMASNPVWEICERMAEVQALLHDHAECGKHSPADVVAKAQAVLTEPDLLRAMLDVGYFPPNTPPPPR
Ga0308309_1050472313300028906SoilMVDNPTWAICERVAEVQALLHDHVAGGKRLAADVVAKAQAVLIEPELLQAMFDVGYFPPNTPPPTGR
Ga0308309_1086731523300028906SoilMASNPVWEICERMAEVQALLHDHTECGKHTPADVVAKAQAVLSEPELLRAMFDVGYFPPNTPPSVV
Ga0265760_1000877343300031090SoilMVDNPVWEICERVAEVHALLDDHIAGGKHAAAVVIAKAQAILSEPALQRAMFDVGYFPPNTPPHD
Ga0265760_1001923823300031090SoilMWPICERVAEVQALLDGLAGGKHTPADVLANAQAILSEPALLRAMFDVGYFPPNTPPGE
Ga0265760_1001985823300031090SoilMVSNPVWEICERVAEVQALLDDQLAGGKHSAADVVTKAHAVLSKAELLQAMFDVGYVPPNNIKVGVSLRVLHENT
Ga0265760_1004014323300031090SoilVWEICERVAEVQALLDDHIADGKHSAADVVAKAQAVLSEAELLRDIFDFGYFPPNTLPDN
Ga0265760_1005503023300031090SoilMASNPVWEICERMAEVQALLHDHAECGKHTAADVVAKAQTVLSEPELLRAMFDVGYFPPNTPPGTRF
Ga0170823_1211061513300031128Forest SoilDNPVWEICERMAEVQALLHDHAECGKHEAADVVAKAQAVLTEPELLRAMFDVGYFPPNTPPPE
Ga0170824_10455321613300031231Forest SoilVADNPVWAICERVAEVQALLHDHVECSNHSAADVVAKSQAVLSEPGLLRAMFDVGYFPPNTPP
Ga0170824_10934426923300031231Forest SoilMADNPVWEICERMAEVQALLHDHAECGKHEAADVVAKAQAVLTEPELLRAMFDVGYFPPNTPPPEYKRPQCR
Ga0310686_10031052223300031708SoilMSETVFAICERVAEVQALLHDHIECGKHSAADVVAKAQPILSETELLQAMFGVGYFPSNTPPIGAP
Ga0310686_10867686663300031708SoilMVDNPVWETCERVAEVQALLEDHVAGGKHSATDVVARAQEILSESKLLRAMWDVGYFPPNTPPGC
Ga0310686_10951329943300031708SoilMASNPVWEICERMAEVQALLHDHAECGKHTGADVVAKAQAVLSEPELLRAMFNVGYFPPNAPPVK
Ga0310686_11085691313300031708SoilMRMVDNPVWEICERVAEVQALLDDHVARGKHSAADVVAKAQAVLSEAELLRAMFDV
Ga0310686_11510529363300031708SoilMASNPVWEICEHAAEVQALLDDHLASGKHSAADVVAKAQAVLSEPALLQAMFDVRYFPPNMPPKR
Ga0310686_11801114843300031708SoilMADNPAWEICERVAEVQALLHDHECGKHSAADVVAKAQAVPYESELLRAMFDVGYFPPNTPPPE
Ga0310686_11990259013300031708SoilMVDNPVWEICGRVAEVQALLDDHVAGGKHSAADVVAKAQAVQSEAELLRAMFDVGYFPPDTPPA
Ga0308175_10039059933300031938SoilMQHNAFEICEWVAEAPVLLHDHVACGKHSAAEAVARLQALMSERELLQAICDVGYFPPNKPMPRI
Ga0308176_1023459143300031996SoilFEICEWVAEAQVLLHDHVACGKHSAAEAVARLQALMSERELLQAICDVGYFPPNKPMPRI
Ga0311301_1009685653300032160Peatlands SoilMADNPIWEICERVAEVQALLDDHLAGRKHTAADVVAKAQAVLSESAPLRAVFDVAYFPCG
Ga0311301_1015432613300032160Peatlands SoilMVDNPVWEICERVPEVQALLHDHIECDKDSAADVVVKAQAILLRAMFNVG
Ga0311301_1021281163300032160Peatlands SoilMVDNLAWKICERVAEVQAPLHHHIKCGKHSATDVVAKAQTVLAEPDLLRAMFDVGYFPPNTPPVE
Ga0311301_1025049623300032160Peatlands SoilMVSNPMWEICERVAEVQALLDDHLAGGKHTAADVFAKAQAVLSEAKLLRAMFVVGYFPTNTPPCPGTPGGAHRKGVF
Ga0311301_1028500253300032160Peatlands SoilMVSNPVWEICERVAEVQALLHDHTEGGKHSAADVVARAQAVLSEAELLRAMFVVGYFPPNTPPGTRF
Ga0311301_1038438933300032160Peatlands SoilMVDNPVWEICERVPEVQALLDDHVAGGKHSAADVVAKAQVVLSDSELLRAMFDVGYFPPNTLPPDD
Ga0311301_1043051423300032160Peatlands SoilMVSNPVWKICERVAEVQALLDDQLAGGKHSAADVVAKAQAQAVRSEAELLQAMFDVGYFPPSTPPGE
Ga0311301_1064324033300032160Peatlands SoilMVDNPVWEICERVAEVQALLDDHLASGKHSAADVVAKAQAVLTVSELLRAMFDVGYFPPNTPPFTR
Ga0311301_1066517623300032160Peatlands SoilMVSNPVWEICERVAEVQALLHDHAECGKHTAADVVAKAQAVLTEPELLRAMFDVGYFPPNTPPGTRF
Ga0311301_1086692923300032160Peatlands SoilMVSNPVWEICERMAEVQALLDDHLAGGKHTAADVVAKAQAVLSEAALQRAMFDVGYLPPNTPRLRRPK
Ga0311301_1281032013300032160Peatlands SoilMVDNPVWEICERVAEVQALLDDHVAGGNHSAADVVAKAQAVLSEAELLRAMFDVGYFPPNTPPDE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.