Metagenome Family F050562

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050562
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	53 residues
Representative Sequence	MRLDTVDYRSSQSDVRTSQDENNQKSLMTPARRAALDALEREFHDLLNAPPR
Number of Associated Samples	108
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.65 %
% of genes near scaffold ends (potentially truncated)	9.66 %
% of genes from short scaffolds (< 2000 bps)	73.79 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.379 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (19.310 % of family members)
Environment Ontology (ENVO)	Unclassified (31.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.690 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.25% β-sheet: 0.00% Coil/Unstructured: 48.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF13378	MR_MLE_C	15.86
PF00083	Sugar_tr	5.52
PF07690	MFS_1	2.76
PF02515	CoA_transf_3	2.76
PF00313	CSD	2.07
PF01641	SelR	1.38
PF02113	Peptidase_S13	0.69
PF03734	YkuD	0.69
PF13936	HTH_38	0.69
PF02518	HATPase_c	0.69
PF03880	DbpA	0.69
PF02308	MgtC	0.69
PF09370	PEP_hydrolase	0.69
PF00089	Trypsin	0.69
PF03450	CO_deh_flav_C	0.69
PF00126	HTH_1	0.69
PF13407	Peripla_BP_4	0.69
PF05853	BKACE	0.69
PF02776	TPP_enzyme_N	0.69
PF01408	GFO_IDH_MocA	0.69
PF07969	Amidohydro_3	0.69
PF09361	Phasin_2	0.69
PF00180	Iso_dh	0.69
PF03597	FixS	0.69
PF00486	Trans_reg_C	0.69
PF13545	HTH_Crp_2	0.69
PF00440	TetR_N	0.69
PF01042	Ribonuc_L-PSP	0.69
PF00107	ADH_zinc_N	0.69
PF02545	Maf	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.76
COG0513	Superfamily II DNA and RNA helicase	Replication, recombination and repair [L]	2.07
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	1.38
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.69
COG0424	7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.69
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.69
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.69
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.69
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.69
COG3197	Cytochrome oxidase maturation protein, CcoS/FixS family	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.69

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.38 %
Unclassified	root	N/A	18.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.38 %
Unclassified	root	N/A	18.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.38 %
Unclassified	root	N/A	18.62 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.00 %
Unclassified	root	N/A	18.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	68.28 %
Unclassified	root	N/A	18.62 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.07 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	61.38 %
Unclassified	root	N/A	18.62 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.83 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.83 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4.14 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.07 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.83 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	4.14 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.07 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.83 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	4.14 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.07 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.83 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.45 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.07 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.38 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001402\|JGI20195J14853_1034964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	718	Open in IMG/M
3300002461\|AADWTP_10002334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	98580	Open in IMG/M
3300003369\|JGI24140J50213_10175109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300004072\|Ga0055512_10151293	Not Available	509	Open in IMG/M
3300004079\|Ga0055514_10103301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	717	Open in IMG/M
3300005327\|Ga0070658_11345141	Not Available	620	Open in IMG/M
3300005435\|Ga0070714_101727580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	611	Open in IMG/M
3300005439\|Ga0070711_100093568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2171	Open in IMG/M
3300005829\|Ga0074479_10447219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1126	Open in IMG/M
3300005938\|Ga0066795_10121022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	780	Open in IMG/M
3300005980\|Ga0066798_10016749	All Organisms → cellular organisms → Bacteria → Proteobacteria	2547	Open in IMG/M
3300005993\|Ga0080027_10156911	Not Available	876	Open in IMG/M
3300005994\|Ga0066789_10015472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3378	Open in IMG/M
3300006050\|Ga0075028_100192762	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300006050\|Ga0075028_100835920	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300006050\|Ga0075028_101022105	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300006174\|Ga0075014_100992931	Not Available	508	Open in IMG/M
3300006638\|Ga0075522_10037188	Not Available	2906	Open in IMG/M
3300006638\|Ga0075522_10192109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1035	Open in IMG/M
3300006642\|Ga0075521_10075207	All Organisms → cellular organisms → Bacteria → Proteobacteria	1516	Open in IMG/M
3300006642\|Ga0075521_10195029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300006642\|Ga0075521_10690762	Not Available	504	Open in IMG/M
3300006795\|Ga0075520_1018833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3456	Open in IMG/M
3300006950\|Ga0075524_10066427	All Organisms → cellular organisms → Bacteria → Proteobacteria	1512	Open in IMG/M
3300009091\|Ga0102851_10950157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	931	Open in IMG/M
3300009091\|Ga0102851_11420226	Not Available	771	Open in IMG/M
3300009167\|Ga0113563_10144307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2280	Open in IMG/M
3300009650\|Ga0105857_1023092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1653	Open in IMG/M
3300009650\|Ga0105857_1076540	All Organisms → cellular organisms → Bacteria → Proteobacteria	887	Open in IMG/M
3300009662\|Ga0105856_1057412	All Organisms → cellular organisms → Bacteria → Proteobacteria	1095	Open in IMG/M
3300010371\|Ga0134125_10102199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3191	Open in IMG/M
3300010885\|Ga0133913_10487729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3249	Open in IMG/M
3300010885\|Ga0133913_12069781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1410	Open in IMG/M
3300011431\|Ga0137438_1087537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	943	Open in IMG/M
3300011431\|Ga0137438_1269877	Not Available	508	Open in IMG/M
3300012924\|Ga0137413_10497727	Not Available	896	Open in IMG/M
3300012924\|Ga0137413_11281846	Not Available	587	Open in IMG/M
3300012931\|Ga0153915_11799935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	717	Open in IMG/M
3300012931\|Ga0153915_12382727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	619	Open in IMG/M
3300012943\|Ga0164241_10487766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	887	Open in IMG/M
3300012964\|Ga0153916_10986487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	923	Open in IMG/M
3300012964\|Ga0153916_11373825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	783	Open in IMG/M
3300012964\|Ga0153916_11570248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	733	Open in IMG/M
3300013503\|Ga0120127_10046932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	855	Open in IMG/M
3300013772\|Ga0120158_10249847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300013772\|Ga0120158_10466461	Not Available	565	Open in IMG/M
3300014200\|Ga0181526_10381013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	896	Open in IMG/M
3300014323\|Ga0075356_1169050	Not Available	572	Open in IMG/M
3300014502\|Ga0182021_11816944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	734	Open in IMG/M
3300014502\|Ga0182021_12291095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	650	Open in IMG/M
3300014502\|Ga0182021_12325636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	645	Open in IMG/M
3300014838\|Ga0182030_10022532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	11715	Open in IMG/M
3300015063\|Ga0167649_100441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6301	Open in IMG/M
3300015171\|Ga0167648_1026513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1400	Open in IMG/M
3300015203\|Ga0167650_1008581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2965	Open in IMG/M
3300015203\|Ga0167650_1044982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1129	Open in IMG/M
3300015242\|Ga0137412_10751329	Not Available	721	Open in IMG/M
3300017553\|Ga0182744_1162438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	859	Open in IMG/M
3300018058\|Ga0187766_11113515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300018060\|Ga0187765_10742102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300018060\|Ga0187765_11303750	Not Available	514	Open in IMG/M
3300020034\|Ga0193753_10259204	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300021079\|Ga0194055_10038248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2602	Open in IMG/M
3300021090\|Ga0210377_10027585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4090	Open in IMG/M
3300022553\|Ga0212124_10048318	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300022553\|Ga0212124_10477233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	651	Open in IMG/M
3300022850\|Ga0224552_1001349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4018	Open in IMG/M
3300023079\|Ga0247758_1107219	Not Available	768	Open in IMG/M
3300024330\|Ga0137417_1484590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2801	Open in IMG/M
3300025174\|Ga0209324_10194281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1357	Open in IMG/M
3300025313\|Ga0209431_10125825	All Organisms → cellular organisms → Bacteria → Proteobacteria	2024	Open in IMG/M
3300025313\|Ga0209431_10370755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1110	Open in IMG/M
3300025457\|Ga0208850_1003945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3303	Open in IMG/M
3300025457\|Ga0208850_1037657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	821	Open in IMG/M
3300025482\|Ga0208715_1101922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300025484\|Ga0208587_1002154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10162	Open in IMG/M
3300025495\|Ga0207932_1002620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6102	Open in IMG/M
3300025553\|Ga0208080_1001104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13422	Open in IMG/M
3300025579\|Ga0207927_1045549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1157	Open in IMG/M
3300025604\|Ga0207930_1104370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	643	Open in IMG/M
3300025619\|Ga0207926_1006746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4153	Open in IMG/M
3300025627\|Ga0208220_1030612	Not Available	1668	Open in IMG/M
3300025633\|Ga0208480_1018184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2132	Open in IMG/M
3300025650\|Ga0209385_1037708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1839	Open in IMG/M
3300025750\|Ga0209747_1117780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300025862\|Ga0209483_1023927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3110	Open in IMG/M
3300025878\|Ga0209584_10088883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1132	Open in IMG/M
3300025878\|Ga0209584_10125836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	957	Open in IMG/M
3300025878\|Ga0209584_10130809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	939	Open in IMG/M
3300025891\|Ga0209585_10168385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	851	Open in IMG/M
3300025891\|Ga0209585_10387102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	570	Open in IMG/M
3300025909\|Ga0207705_10680705	Not Available	800	Open in IMG/M
3300025916\|Ga0207663_10067905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2288	Open in IMG/M
3300026272\|Ga0209913_1007833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3412	Open in IMG/M
3300026291\|Ga0209890_10071219	All Organisms → cellular organisms → Bacteria → Proteobacteria	1244	Open in IMG/M
3300027629\|Ga0209422_1004350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3455	Open in IMG/M
3300027815\|Ga0209726_10193918	Not Available	1078	Open in IMG/M
3300027819\|Ga0209514_10435454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	554	Open in IMG/M
3300027894\|Ga0209068_10113601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1440	Open in IMG/M
3300027902\|Ga0209048_10010303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8397	Open in IMG/M
3300028577\|Ga0265318_10389641	Not Available	509	Open in IMG/M
3300029883\|Ga0311327_10435147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	817	Open in IMG/M
3300029984\|Ga0311332_10871466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	720	Open in IMG/M
3300029990\|Ga0311336_10895155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	768	Open in IMG/M
3300031152\|Ga0307501_10254295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	524	Open in IMG/M
3300031226\|Ga0307497_10716004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300031238\|Ga0265332_10342466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300031241\|Ga0265325_10296236	Not Available	723	Open in IMG/M
3300031249\|Ga0265339_10197559	Not Available	994	Open in IMG/M
3300031521\|Ga0311364_12342460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	521	Open in IMG/M
3300031524\|Ga0302320_11739053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	598	Open in IMG/M
3300031711\|Ga0265314_10001524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25572	Open in IMG/M
3300031726\|Ga0302321_100734373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1110	Open in IMG/M
3300031726\|Ga0302321_101845108	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300031726\|Ga0302321_102666617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	584	Open in IMG/M
3300031772\|Ga0315288_10369035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1468	Open in IMG/M
3300031902\|Ga0302322_101296157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	885	Open in IMG/M
3300031997\|Ga0315278_11370658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	686	Open in IMG/M
3300032163\|Ga0315281_10283135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1816	Open in IMG/M
3300032342\|Ga0315286_11194240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	745	Open in IMG/M
3300032516\|Ga0315273_11743434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	752	Open in IMG/M
3300032605\|Ga0316232_1324742	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300032770\|Ga0335085_10000042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	454236	Open in IMG/M
3300032770\|Ga0335085_10528078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1341	Open in IMG/M
3300032770\|Ga0335085_10897574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	966	Open in IMG/M
3300032782\|Ga0335082_10455062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1143	Open in IMG/M
3300032783\|Ga0335079_10419928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1439	Open in IMG/M
3300032783\|Ga0335079_10534669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1246	Open in IMG/M
3300032783\|Ga0335079_12313904	Not Available	510	Open in IMG/M
3300032829\|Ga0335070_10713820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	936	Open in IMG/M
3300032892\|Ga0335081_10010124	All Organisms → cellular organisms → Bacteria → Proteobacteria	15217	Open in IMG/M
3300032892\|Ga0335081_10326649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2014	Open in IMG/M
3300033233\|Ga0334722_10770809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	682	Open in IMG/M
3300033433\|Ga0326726_12029178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300033804\|Ga0314863_101764	Not Available	604	Open in IMG/M
3300034195\|Ga0370501_0010084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2584	Open in IMG/M
3300034195\|Ga0370501_0116633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	908	Open in IMG/M
3300034195\|Ga0370501_0217190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300034195\|Ga0370501_0372059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	521	Open in IMG/M
3300034281\|Ga0370481_0282791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	599	Open in IMG/M
3300034818\|Ga0373950_0009543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.79%
Host-Associated	Host-Associated	6.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.97%
Aquatic	Environmental → Aquatic	24.83%
Plants	Host-Associated → Plants	6.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Freshwater	Environmental → Aquatic → Freshwater	17.93%
Peat	Environmental → Terrestrial → Peat	8.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.21%
Sediment	Environmental → Aquatic → Sediment	5.52%
Marine	Environmental → Aquatic → Marine	1.38%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.28%
Lake	Environmental → Aquatic → Freshwater → Lake	7.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.52%
Loam	Environmental → Terrestrial → Soil → Loam	4.14%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.38%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.69%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	21.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.34%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.21%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.14%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.07%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.38%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.38%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.69%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.69%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	19.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.90%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.14%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.45%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.76%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.76%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.07%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.07%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.07%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.07%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.38%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.38%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.38%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.38%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.69%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.69%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.69%
Freshwater	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Freshwater	0.69%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.69%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.69%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.69%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.69%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300002461	Freshwater microbial communities from a drinking water treatment plant in Ann Arbor, Michigan, USA	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004072	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2	Environmental	Open in IMG/M
3300004079	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005980	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014323	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015063	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3b, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015171	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017553	Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C Kraft MG (version 2)	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300022850	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 1-5	Environmental	Open in IMG/M
3300023079	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026272	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033804	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_20	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20195J14853_10349641	3300001402	Arctic Peat Soil	MGEAMRLDTVDYRSIQSEPRTPQDDNNQQSLITPARRAALNALEREFKELLKAARTSGAV
AADWTP_1000233485	3300002461	Freshwater	MRLETDDGRFSQSDERSTLVQANDQGLLTPARRAALDALEREFHDLLQQAALTRAA*
JGI24140J50213_101751091	3300003369	Arctic Peat Soil	MMRMDTVDYRSTQSDVRKSETEEIQQSLMTPARRAALDALEREFHELLKARPR*
Ga0055512_101512931	3300004072	Natural And Restored Wetlands	MRLETGDYRASQSDQRSVEDQPTDQSLLTPARRAALDALEREFHDLLQHAALTHAA*
Ga0055514_101033012	3300004079	Natural And Restored Wetlands	MRLETGDYRASQSDQRSVEDQPTDQSLLTPARRAALDALEREFHDLLQQAALTRAA*
Ga0070658_113451411	3300005327	Corn Rhizosphere	MSLDAVDYQSSQSDERTPESASNSLMTPARRAALDALEREFQDLLQSPPRKAA*
Ga0070714_1017275802	3300005435	Agricultural Soil	MRLETADYRATRSDQRSVQDQPTDQSLLTPARRAALDALEREFQDLLRQPAR*
Ga0070711_1000935683	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRLETADYRATRSDQRSVQDQSTDQSLLTPARRAALDALEREFQDLLRQPAR*
Ga0074479_104472192	3300005829	Sediment (Intertidal)	MRLDTADYRSSQSDVPPAQDENDRQNSLTPARRAALEGLEREFHDLLKTPPR*
Ga0066795_101210222	3300005938	Soil	MRLDTVDYRSSQSDVRTSQDENNQKSLMTPARRAALDALEREFHDLLNAPPR*
Ga0066798_100167492	3300005980	Soil	MGETMRLDTVDYRSIQSEQRTSQDDDNRQSLLTPARRAALDALEREFHDLLNTPPR*
Ga0080027_101569112	3300005993	Prmafrost Soil	MRLDTVDIRSAQSDVRRTQDEISQKSSLTPERRAALDALEREFHELLNSLSR*
Ga0066789_100154723	3300005994	Soil	MRLDTVDYRSSQSDVRKSQDQNSQKTLLTPERKAALDALECEFRELLNSLQN*
Ga0075028_1001927622	3300006050	Watersheds	MDAVDYRSSQSNERTPQDDISQQSLLTPARRAALDALEHEFRDLLKSLPRPKI*
Ga0075028_1008359201	3300006050	Watersheds	MRLDTVEQRASQSDERKPELNNEATKGLLTPARRAALDALERELHDLLNARPR*
Ga0075028_1010221052	3300006050	Watersheds	MGVDTVNDRSSQSDERKTQDDNIQHGLITPARRAALDALERELHELLKVCPREQA*
Ga0075014_1009929312	3300006174	Watersheds	MGETMGADTVDGQSTQSDERKSQNDTSRHGLMTPARRAALDTLERELHELMKARPR*
Ga0075522_100371881	3300006638	Arctic Peat Soil	MRLAIIENQTSQSDESQSQQSHGGESLLTPARRAALDALEREFRDLLNAQPRL*
Ga0075522_101921092	3300006638	Arctic Peat Soil	MRLDIIENQTSQSDESQSQRSHSGESLLTPARRAALDALEREFRDLLNAQPRL*
Ga0075521_100752073	3300006642	Arctic Peat Soil	MRLDTVDYRSSQSDVRRSQDEQGQKTLLTPERKAALDALECEFRELLNSLGH*
Ga0075521_101950292	3300006642	Arctic Peat Soil	MRMDTVDYRSTQSDVRKSETEEIQQSLMTPARRAALDALEREFHELLKARPR*
Ga0075521_106907621	3300006642	Arctic Peat Soil	MMRLDTVDYRSSQSDVRKTENETSQQSLMTPARRAALDALEREFHELLKARPR*
Ga0075520_10188332	3300006795	Arctic Peat Soil	MRMDTVDYRSTQPDVRKSETEEIQQSLMTPARRAALDALEREFHELLKARPR*
Ga0075524_100664272	3300006950	Arctic Peat Soil	MRLETGDYRSTRSDQRSVQDQSTDQSLLTPARRAALDALEREFQELLHQPAR*
Ga0102851_109501571	3300009091	Freshwater Wetlands	MRAEAVDYRVYQSEQRTLQDDDNRTNGLTPARRAALDALERELQELLRTMSR*
Ga0102851_114202262	3300009091	Freshwater Wetlands	MRAEAVDYRVSQSEQRTSQDDDSHQSGLTPARRAALDALERELQELLRTLSR*
Ga0113563_101443072	3300009167	Freshwater Wetlands	MRAEAVDYRVSQSEQRTLQDDDNRTNGLTPARRAALDALERELQELLRTMPR*
Ga0105857_10230923	3300009650	Permafrost Soil	MRLDTVDIRSSQSDVRRTQDEISQKSSLTPERRAALDALEREFHELLNSLSR*
Ga0105857_10765402	3300009650	Permafrost Soil	MRMDMVDYRSTQSDVRKSETEETQQSLMTPARRAALDALEREFHELLKARPR*
Ga0105856_10574122	3300009662	Permafrost Soil	MRLDTVDIRSSQSDVRRTQDENSQKSSLTPERRAALDALEREFRELLNSLSR*
Ga0134125_101021992	3300010371	Terrestrial Soil	MRLNTIENRSSQLNERQSDHSNDPANQLTPARRAALDALEREFRDLLNAQAR*
Ga0133913_104877293	3300010885	Freshwater Lake	MRLETGDYRASQSDQRNVQDRPNEKSLMTPARRAALDALEREFQELLQHAAR*
Ga0133913_120697813	3300010885	Freshwater Lake	MRLETDDYRASQSDQRNVQDKPNEKSLLTPARRAALDALEREFEELLQHAAR*
Ga0137438_10875371	3300011431	Soil	MRAEAVDYRVSQSEQRTSQDDDNRTNGLTPARRAALDALERELQELLRTLPR*
Ga0137438_12698771	3300011431	Soil	MMRLDTVDYRSSQSDVRKTENETTQQSLMTPARRAALDALEREFHELLKARPR*
Ga0137413_104977272	3300012924	Vadose Zone Soil	MDLDAVDYQATQSDVRTSQDDDSQALMTPARRAALDALERE
Ga0137413_112818462	3300012924	Vadose Zone Soil	MRLDTVENRSSQSDVRTSQGENIQHGLLTPARRAALDALERELQQFLQAIPR*
Ga0153915_117999352	3300012931	Freshwater Wetlands	MRLDTVDYRSSQSDERKSENEATQQSLMTPARRAALDALEREFHDLLKARLR*
Ga0153915_123827271	3300012931	Freshwater Wetlands	MRAEAVDYRVSQSEQRTSQDDDNRTNGLTPARRAALDALERELQELLRALPR*
Ga0164241_104877662	3300012943	Soil	MIRGFIWGNKQMRLATGDYRSSQSNERSVQVQPTDQNLMTPARRAALDALEREFRDLLQTAAR*
Ga0153916_109864872	3300012964	Freshwater Wetlands	MDLDAVDYRSTQSDVRTSQDDNYQPSLLTPARRAALDALERELNELLASLPRPQV*
Ga0153916_113738252	3300012964	Freshwater Wetlands	MRAEAVDYRVSQSEQRTSQHDDNRTNGLTPARRAALDALERELQELLRALPR*
Ga0153916_115702482	3300012964	Freshwater Wetlands	MDTVDYRSIQSDQRTSHDDDNHKSLMTPARRAALDALEREFHELLNAPPH*
Ga0120127_100469322	3300013503	Permafrost	MRLDTAEYRVTQSNERPSPEDDNAEHNLMTPARRAALDALEREFQELLNVPPRR*
Ga0120158_102498472	3300013772	Permafrost	MDLDAVDYRSTQSDGRTSPDNNDTGTSLLTPARRAALDALEREFSDLLNSLPRRQA*
Ga0120158_104664612	3300013772	Permafrost	MRLETADYRATRSDQRSVQNQSTDQSLLTPARRAALDALEREFQDLLQ
Ga0181526_103810132	3300014200	Bog	MRLDTVDDRSSESDEPQSQERKAELSLMTPARRAAIDALEREFRDLLNAPPR*
Ga0075356_11690501	3300014323	Natural And Restored Wetlands	MRLETGDYRASQSDQRSVEDQPTDQSLLTPARRAALDALEREFHDLLQHAALTRAA*
Ga0182021_118169442	3300014502	Fen	MWMNLDAVDYQAPQSDERTPQDEKQQSLMTPARRAVLDALEHEFRDLLNSLPPR*
Ga0182021_122910952	3300014502	Fen	MSLDAVDYEGFQSDERTSESDGKNLMTPARRAALDALEREFQDLLQSLPRAAA*
Ga0182021_123256362	3300014502	Fen	MNLDAVDYRSTQSDVRTSQEDNRRPSLLTPARRAALDALEREFNELLNSLPRPQI*
Ga0182021_133474762	3300014502	Fen	MRLDTIDDRSSQSDLRRPQDDHSQKSLLTPERRAGLEALEREFTELLNALPR*
Ga0182030_100225323	3300014838	Bog	MRLDTADYRSAQSDMRTSQDENTQQSLMTPARRAALDALEREFHELLNQPPR*
Ga0182030_107103163	3300014838	Bog	STGNRGIDMRLDTIDDRSSQSDLRRPQDDHSQKTLLTPERRAGLEALEREFTELLNALPR
Ga0167649_1004412	3300015063	Glacier Forefield Soil	MWMDLDAVDYQAPQSDERTPEEQKQQSLMTPARRAVLDALEQEFRDLLNSLPR*
Ga0167648_10265134	3300015171	Glacier Forefield Soil	MWMNLDAVDYQAPQSDERTPQDEKQQSLMTPARRAVLDALEQEFRDLLNSLPPR*
Ga0167650_10085813	3300015203	Glacier Forefield Soil	MRLDTVDTRSSQSAVRNNQDDNSRQSLLTPERRAVLDALEHEFRELLNSVPR*
Ga0167650_10449821	3300015203	Glacier Forefield Soil	MWMDLDAVDYQAPQSDERTPEEQKQQSLMTPARRAVLDALEREFSDLLNSL
Ga0137412_107513291	3300015242	Vadose Zone Soil	MDLDAVDYQVSQSDVRTSQDDNSETLMTPARRAALDALEREFHDLLNSLPRARA*
Ga0182744_11624381	3300017553	Compost	MRLDTIEHRSVQSDERSIQSQSSNQGLMTPARRAALDALEREFQDLLHTARR
Ga0187766_111135152	3300018058	Tropical Peatland	MQTEAIDFRVSQSGQRTLQNDVESKNLLTPARRAALDALEREFEDLLRAHSQAAAA
Ga0187765_107421022	3300018060	Tropical Peatland	MQTEAIDFRVSQSGQRTLQDDVESKNLLTPARRAALDALEREFEDLLRAHSQAAAA
Ga0187765_113037501	3300018060	Tropical Peatland	MQVDTIEYRVSQSGQRTLQDDVERKSLLTPARRAALDALEREFADLLGKQSQTAA
Ga0193753_102592042	3300020034	Soil	MDLDAVDYQGTQSDVRTSQHDNSETLLTPARRAALDALEREFHDLLNARPHARA
Ga0194055_100382483	3300021079	Anoxic Zone Freshwater	MRLETSDYPATQSDQRNVQDRPNEKSLLTPARRAALDALEREFEELLQHAAR
Ga0210377_100275853	3300021090	Groundwater Sediment	MRAEAVDYRVAQSEQRTSQDDDNRTNGLTPARRAALDALERELQELLRALPR
Ga0212124_100483182	3300022553	Freshwater	MRMDAVDYRSYQSDQRTTQDETSQQSLMTPARRAALDALEREFHELLNTPQR
Ga0212124_104772331	3300022553	Freshwater	MRGDAVDYRSSQSDQRTSQDENNPKSLMTPARRAALDALEREFRELLNTPPR
Ga0224552_10013492	3300022850	Soil	MRLDTVDYRSAQSDMRTSQDENTQQSLMTPARRAALDALEREFHELLNPPPR
Ga0247758_11072192	3300023079	Plant Litter	MRLETGDYRSSQSNERSVQVQPADQNLMTPARRAALDALEREFRDLLQTAAR
Ga0137417_14845904	3300024330	Vadose Zone Soil	MDLDAVDYQGAQSDVRTSQHDNSETLLTPARRAALDALEREFHDLLNSRPHARA
Ga0209324_101942812	3300025174	Soil	MRAEAVDYRVSQSEQRPSQDDDNRMNGLTPARRAALDALERELQELLRALPR
Ga0209431_101258252	3300025313	Soil	MMSLDAVDDRSSQSEQRRSQDDSKPKSLLTPARRAALDMLEREFQELLNARPR
Ga0209431_103707551	3300025313	Soil	MMSLDAVDDRSSRSEQRRSQDDDNRTSGLTPARRAALDALERELQELLRALPR
Ga0208850_10039451	3300025457	Arctic Peat Soil	DAAMGETMRLDTVDYRSIQSEPRTPQDDNNQQSLITPARRAALNALEREFKELLKAARTSGAV
Ga0208850_10376572	3300025457	Arctic Peat Soil	MGETMRLDTVDYRSIQSEQRTSQDDDNRQSLLTPARRAALDALEREFHDLLNTPPR
Ga0208715_11019221	3300025482	Arctic Peat Soil	MGETMRLDTVDYRSTQSDVRKSETEEIQQSLMTPARRAALDALEREFHELLKARPR
Ga0208587_10021544	3300025484	Arctic Peat Soil	MRLDTVDYRSIQSEPRTPQDDNNQQSLITPARRAALNALEREFKELLKAARASGAV
Ga0207932_10026203	3300025495	Arctic Peat Soil	MRAEAVDYRVSQSEQRTSQDDDNRTSGLTPARRAALDALERELQELLRALPR
Ga0208080_10011042	3300025553	Arctic Peat Soil	MRLDTVDYRSIQSEPRTPQDDNNQQSLITPARRAALNALEREFKELLKAARTSGAV
Ga0207927_10455492	3300025579	Arctic Peat Soil	MRLDTVDYRSSQSDVRTSQDENNQKSLMTPARRAALDALEREFHDLLNAPPR
Ga0207930_11043702	3300025604	Arctic Peat Soil	MRMDMVDYRSTQSDVRKSETEETQQSLMTPARRAALDALEREFHELLKARPR
Ga0207926_10067462	3300025619	Arctic Peat Soil	MGETMRLDTVDYRSIQSEPRTPQDDNNQQSLITPARRAALNALEREFKELLKAARTSGAV
Ga0208220_10306121	3300025627	Arctic Peat Soil	MRLDTVENRSSRLNESQPDHSDNPSNRMTPARRAALDALEREFR
Ga0208480_10181842	3300025633	Arctic Peat Soil	MRLDTVENRSSRLNESQPDHSDNPSNRMTPARRAALDALEREFRDLLNAQPR
Ga0209385_10377084	3300025650	Arctic Peat Soil	MRMDTVDYRSTQSDVRKSETEEIQQSLMTPARRAALDALEREFHELLKARPR
Ga0209747_11177802	3300025750	Arctic Peat Soil	MTRFDGGNWGKTMRWDTVDHRSTQSDQRKSQDENTQHGLMTPARRDALDALERQLHEFLKAIPR
Ga0209483_10239273	3300025862	Arctic Peat Soil	MRLAIIENQTSQSDESQSQQSHGGESLLTPARRAALDALEREFRDLLNAQPRL
Ga0209584_100888832	3300025878	Arctic Peat Soil	MRLDTVDYRSSQSDVRRSQDEQGQKTLLTPERKAALDALECEFRELLNSLGH
Ga0209584_101258362	3300025878	Arctic Peat Soil	MMRMDTVDYRSTQSDVRKSETEEIQQSLMTPARRAALDALEREFHELLKARPR
Ga0209584_101308092	3300025878	Arctic Peat Soil	MRLDTVETRSYQSDVRRSQDQNGQKTLLTPERKAVLDALEREFSELLSSLGR
Ga0209585_101683852	3300025891	Arctic Peat Soil	MRLETGDYRSTRSDQRSVQDQSTDQSLLTPARRAALDALEREFQELLHQPAR
Ga0209585_103871021	3300025891	Arctic Peat Soil	MDLDAVDYRSTQSDVRTVPDHNDTQASLLTPARRAALDALEREFSELLNSLPRPQV
Ga0207705_106807052	3300025909	Corn Rhizosphere	MSLDAVDYQSSQSDERTPESASNSLMTPARRAALDALEREFQDLLQSPPRKAA
Ga0207663_100679053	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRLETADYRATRSDQRSVQDQSTDQSLLTPARRAALDALEREFQDLLRQPAR
Ga0209913_10078334	3300026272	Soil	MGETMRLDTVDYRSIQSEQRTSQDDDNRQSLLTPACRAALDALEREFHDLLNTPPR
Ga0209890_100712192	3300026291	Soil	MRLDTVDYRSSQSDVRKSQDQNSQKTLLTPERKAALDALECEFRELLNSLQN
Ga0209422_10043502	3300027629	Forest Soil	MHLDTVDYRSSHSDERKSGNDETQPSLLTPARRAALDALEREFHELLKARSR
Ga0209726_101939181	3300027815	Groundwater	MRAEAVDYRVSQSEQPTSQNDDSHKCGLTLARRAALDALERELQELLRALPR
Ga0209514_104354542	3300027819	Groundwater	MMRLDAVDDRSSQSEQRRSQDDNKPKSLLTPARRAALDTLEREFQELLNARPRSRQI
Ga0209068_101136012	3300027894	Watersheds	MDAVDYRSSQSDERTPQDDTSQQTLLTPARRAALEALEHEFRDLLKSLPRPKI
Ga0209048_100103038	3300027902	Freshwater Lake Sediment	MGVDTVNDRSSQSDERKTQDDNVQHGLITPARRAALDALERELHELLKVRPREQA
Ga0265318_103896412	3300028577	Rhizosphere	MRLETGDYRATRSDQRSVQDQPTDQSLLTPARRAALDALEREFQELLRQPAR
Ga0311327_104351472	3300029883	Bog	MRLDTVDYRSDQSDMRTSQDENTQQSLMTPARRAALDALEREFHELLNPPPR
Ga0311332_108714663	3300029984	Fen	MRLDTVDYRSTQSDVRTSTDHSSRKTLLTPERKAALEALEREFRDLLKSSQS
Ga0311336_108951551	3300029990	Fen	MRLDTVDYRSTQSDVRTSTDHSSRKTLLTPERKAALEALEREFRGLLK
Ga0311336_110003022	3300029990	Fen	MRLDTIDDRSSQSDLRRPQDDHSQKSLLTPERRAGLEALEREFTELLNAMPR
Ga0307501_102542952	3300031152	Soil	MDLDAVDYQVSQSDVRTSQHDNSETLLTPARRAALDALEREFHDLLNSRPHARA
Ga0307497_107160041	3300031226	Soil	MRMYAVDYQSSQSDVRISQDENNQKYLLTPARRAVLHALEREFREPLNS
Ga0265332_103424661	3300031238	Rhizosphere	MMRLDTVDYRSSQSDVRKTENETTQQSLMTPARRAALDALEREFHELLKARPR
Ga0265325_102962362	3300031241	Rhizosphere	MRLETGDYRASQSDQRSVQEQPTDQSLLTPARRAALDALEREFHELLQHPAR
Ga0265329_103438411	3300031242	Rhizosphere	MRLDTIDDRSSQSDLRRPQDDHSQKTLLTPERRAGLEALEREFTELLNALPR
Ga0265339_101975591	3300031249	Rhizosphere	MSLDAVDYQGTQSDVRTAEDNRRNTLLTPARRAALDALEREFRELLNAPQRQRV
Ga0311364_123424602	3300031521	Fen	MSLDAVDTEAFQSDERTTENSGKNLMTPARRAALDALEREFQDLLQSLPRAAA
Ga0302320_117390532	3300031524	Bog	MRLDTVDYRSSQSDVRTHQDDNRRQSLMTPARRAALDALEREFQELLNPPQR
Ga0265314_100015246	3300031711	Rhizosphere	MSLDAVDYQTTQSDVRTSEDNRSNTLLTPARREALDALEREFQELLNSLQRP
Ga0302321_1007343732	3300031726	Fen	MSLDAVEHKGSQSDVRTTDNTGSSLMTPARRAALDALEREFQDLLRSLPRQAA
Ga0302321_1018451081	3300031726	Fen	MRCEGKWGALMSLDAVDTEGFQSDERTTEHTGKSLMTPARRAALDALEREFQDLLQSLPRAAA
Ga0302321_1026666172	3300031726	Fen	MSLDAVDYEVSQSDERTSEKPSKSLMTPARRAALDALEREFQDLLQSLPRAAA
Ga0315288_103690352	3300031772	Sediment	MRMDAVDYQSSQSDVRVSQDENSQKNLLTPARRAALDALEREFRELLNSLER
Ga0302322_1012961572	3300031902	Fen	MRLSTVDTRSSQSDVRTSQDTNSRQSLLTPARREALDALEREFLKLVNAPPR
Ga0315278_113706582	3300031997	Sediment	MDSVDYQSSQSDVRISQDENSQKNLLTPARRAALDALEREFRELLNSLER
Ga0315281_102831355	3300032163	Sediment	MRTDTVEYRSSGVVQRTPENGETQTSLMTPARRAALAALEREFSDLLKARGGSQ
Ga0315286_111942401	3300032342	Sediment	STGPLGELMRMDAVDYQSSQSDVRVSQDENSQKNLLTPARRAALDALEREFRELLNSLER
Ga0315273_117434343	3300032516	Sediment	TGPLGELMRMDAVDYQSSQSDVRVSQDENSQKNLLTPARRAALDALEREFRELLNSLER
Ga0316232_13247422	3300032605	Freshwater	MSLDAVDYEVSQSDVRTSEHAGDSLMTPARRAALDALEREFQDLLQSLPRTAA
Ga0335085_1000004296	3300032770	Soil	MRLDKADDRSSQSDPRKPDVETNRQSQMPPARRAALDALEREFHDLLKVRTR
Ga0335085_105280782	3300032770	Soil	MRLDTVETQSSQSHERQSQPSEAEQSLMTPARRAALEALEREFRDLLNARPQP
Ga0335085_108975742	3300032770	Soil	MAMRMHAVDERVSQSEQRESQDSDRNGSRLTPARRAALDALEREFHALLQAQAR
Ga0335082_104550621	3300032782	Soil	MRVDAIDYRVSQSEQRTSQDDDGHKSGLTPARRAALDALEREFHDLLQAQAR
Ga0335079_104199282	3300032783	Soil	MGVKMRLDTVETRSSQSDERQSQESEIQQSLMTPARRAALDALEREFRDLLNAQPHS
Ga0335079_105346692	3300032783	Soil	MRLDTVETRSSQSDERQSQESESQQSLMTPARRAALDALEREFRDLLNAQPHA
Ga0335079_123139042	3300032783	Soil	MRLDTVDNRSSQSDELQSQESDSQQNLMTPARRAALDALEREFRDLLNAQPHA
Ga0335070_107138201	3300032829	Soil	MGVKMRLDTVETRSSQSDERQSQESDIQQSLMTPARRAALDALEREFRDLLNAQPHA
Ga0335081_100101241	3300032892	Soil	DERKSIADDDSPRLLTPARRAALDALEREFRELLQAR
Ga0335081_103266492	3300032892	Soil	MRLDTVETQSSQSHERQSQQSEAEQSLMTPARRAALEALEREFRDLLNARPQP
Ga0334722_107708092	3300033233	Sediment	MRAEAVDYRVSQSEQRTSQDDDNRTNGLTPARRAALDALERELQELLRALPR
Ga0326726_120291781	3300033433	Peat Soil	YRSSQSDERKSENEATQQSLLTPARRAALDALEREFHDLLKARPR
Ga0314863_101764_299_466	3300033804	Peatland	MHTDTIEYRVSQSGQRTLQNDVERKSLLTPARRAALDALEREFADLLRKQSQTAA
Ga0370501_0010084_430_591	3300034195	Untreated Peat Soil	MWMDLDAVDYQAPQSDERTPEEQKQQSLMTPARRAVLDALEQEFRDLLNSLPR
Ga0370501_0116633_133_297	3300034195	Untreated Peat Soil	MSLDAADYEGSQSDERTSESAGNGLMTPARRAALDALEREFQDLLQSPPRAAAA
Ga0370501_0217190_319_477	3300034195	Untreated Peat Soil	MRLDTVETRSYQSDVRSSQDQNGQKTLLTPERKAVLDALEREFSELLSSLGR
Ga0370501_0372059_259_420	3300034195	Untreated Peat Soil	MNLDAVDYQVSQSDVRTSDDNNSQTLLTPARRAALDALEREFRDLLATVPRPA
Ga0370481_0282791_3_152	3300034281	Untreated Peat Soil	DTVDTRSSQSDVRTSQDNNSRQSLLTPARRELLDALEREFLKLVNASTR
Ga0373950_0009543_962_1123	3300034818	Rhizosphere Soil	MRLETGDYRSTDQRSVDDHSTEHSLLTPARRAALDALEREFHDLLQQTRADAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050562

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences