Metagenome / Metatranscriptome Family F050557

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050557
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	40 residues
Representative Sequence	MQNSPQGPKIGSGGAYIDEMVKVAGQWLFRYRKIDRFIAP
Number of Associated Samples	126
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.76 %
% of genes near scaffold ends (potentially truncated)	95.86 %
% of genes from short scaffolds (< 2000 bps)	93.10 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.310 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.345 % of family members)
Environment Ontology (ENVO)	Unclassified (32.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.241 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 39.71% Coil/Unstructured: 60.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF10282	Lactonase	20.00
PF02775	TPP_enzyme_C	10.34
PF13714	PEP_mutase	4.14
PF01042	Ribonuc_L-PSP	3.45
PF00106	adh_short	2.76
PF07859	Abhydrolase_3	2.76
PF03928	HbpS-like	2.76
PF00005	ABC_tran	2.07
PF01575	MaoC_dehydratas	2.07
PF01814	Hemerythrin	1.38
PF02371	Transposase_20	0.69
PF04377	ATE_C	0.69
PF02668	TauD	0.69
PF04376	ATE_N	0.69
PF02449	Glyco_hydro_42	0.69
PF01594	AI-2E_transport	0.69
PF02776	TPP_enzyme_N	0.69
PF01904	DUF72	0.69
PF04909	Amidohydro_2	0.69
PF13683	rve_3	0.69
PF13577	SnoaL_4	0.69
PF01370	Epimerase	0.69
PF03358	FMN_red	0.69
PF07992	Pyr_redox_2	0.69
PF02492	cobW	0.69
PF13472	Lipase_GDSL_2	0.69
PF07805	Obsolete Pfam Family	0.69
PF13462	Thioredoxin_4	0.69
PF01050	MannoseP_isomer	0.69
PF04055	Radical_SAM	0.69
PF09834	DUF2061	0.69
PF13458	Peripla_BP_6	0.69
PF13561	adh_short_C2	0.69
PF00873	ACR_tran	0.69
PF02627	CMD	0.69
PF00497	SBP_bac_3	0.69
PF00072	Response_reg	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	3.45
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	2.76
COG2935	Arginyl-tRNA--protein-N-Asp/Glu arginylyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.38
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.69
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.69
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.69
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.69
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.69
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.69

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.31 %
Unclassified	root	N/A	20.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.31 %
Unclassified	root	N/A	20.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.31 %
Unclassified	root	N/A	20.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.69 %
Unclassified	root	N/A	20.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.72 %
Unclassified	root	N/A	20.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.90 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.90 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.07 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.69 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.07 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.38 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	1.38 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	0.69 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.69 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.90 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.07 %
unclassified Acidisoma	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma	1.38 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.38 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.69 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.69 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.90 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	2.07 %
Acidisoma sp. L85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	1.38 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.38 %
Rhizobium etli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli	0.69 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.69 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.90 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	2.07 %
Acidisoma sp. L85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	1.38 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.38 %
Rhizobium etli CNPAF512	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	0.69 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.69 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118164938	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300004080\|Ga0062385_10033636	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300004463\|Ga0063356_106299603	Not Available	508	Open in IMG/M
3300005335\|Ga0070666_10305498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	1133	Open in IMG/M
3300005355\|Ga0070671_100553613	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005435\|Ga0070714_100247867	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300005458\|Ga0070681_10195981	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300005471\|Ga0070698_102216999	Not Available	503	Open in IMG/M
3300005529\|Ga0070741_10261824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1642	Open in IMG/M
3300005541\|Ga0070733_11005242	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005542\|Ga0070732_10177937	All Organisms → cellular organisms → Bacteria → Proteobacteria	1269	Open in IMG/M
3300005591\|Ga0070761_10605159	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005591\|Ga0070761_10793910	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005610\|Ga0070763_10504963	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300005895\|Ga0075277_1088666	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300006047\|Ga0075024_100873172	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006057\|Ga0075026_100674550	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300006175\|Ga0070712_100254621	Not Available	1404	Open in IMG/M
3300006954\|Ga0079219_12021551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	549	Open in IMG/M
3300007255\|Ga0099791_10539280	Not Available	568	Open in IMG/M
3300007788\|Ga0099795_10490590	Not Available	571	Open in IMG/M
3300009012\|Ga0066710_104875365	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300009038\|Ga0099829_10622677	Not Available	897	Open in IMG/M
3300009089\|Ga0099828_11778227	Not Available	541	Open in IMG/M
3300009137\|Ga0066709_103406917	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300009400\|Ga0116854_1033881	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300009553\|Ga0105249_10738491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1046	Open in IMG/M
3300009826\|Ga0123355_11687497	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300010046\|Ga0126384_10970297	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010048\|Ga0126373_12905919	Not Available	534	Open in IMG/M
3300010359\|Ga0126376_12372550	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010361\|Ga0126378_10902313	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300010361\|Ga0126378_11111092	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300010379\|Ga0136449_101998544	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300010397\|Ga0134124_11011114	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300010398\|Ga0126383_10010094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6805	Open in IMG/M
3300011269\|Ga0137392_10246183	Not Available	1471	Open in IMG/M
3300012200\|Ga0137382_10295875	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300012202\|Ga0137363_11191903	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300012203\|Ga0137399_10163814	Not Available	1785	Open in IMG/M
3300012356\|Ga0137371_11102702	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012356\|Ga0137371_11167068	Not Available	576	Open in IMG/M
3300012361\|Ga0137360_11397558	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012362\|Ga0137361_10591707	Not Available	1017	Open in IMG/M
3300012917\|Ga0137395_10377156	Not Available	1013	Open in IMG/M
3300012917\|Ga0137395_11246548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300012927\|Ga0137416_10429631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300012948\|Ga0126375_10962405	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300012971\|Ga0126369_12249333	Not Available	632	Open in IMG/M
3300012971\|Ga0126369_12485593	Not Available	603	Open in IMG/M
3300013294\|Ga0120150_1059486	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300013296\|Ga0157374_10252228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1737	Open in IMG/M
3300013765\|Ga0120172_1116783	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300014157\|Ga0134078_10265679	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300014199\|Ga0181535_10599878	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300014493\|Ga0182016_10598972	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300016294\|Ga0182041_10200615	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300016357\|Ga0182032_10003493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7621	Open in IMG/M
3300016357\|Ga0182032_10061734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2487	Open in IMG/M
3300016357\|Ga0182032_10312871	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300016357\|Ga0182032_11453355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	594	Open in IMG/M
3300016371\|Ga0182034_11031878	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300017822\|Ga0187802_10415156	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300018017\|Ga0187872_10180216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	989	Open in IMG/M
3300018033\|Ga0187867_10749479	Not Available	531	Open in IMG/M
3300020069\|Ga0197907_10774637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300020583\|Ga0210401_11035821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	679	Open in IMG/M
3300020583\|Ga0210401_11604375	Not Available	508	Open in IMG/M
3300020610\|Ga0154015_1378715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300021406\|Ga0210386_11544809	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300021444\|Ga0213878_10553875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	508	Open in IMG/M
3300021476\|Ga0187846_10170235	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300021560\|Ga0126371_12741960	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300022523\|Ga0242663_1069817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300022533\|Ga0242662_10169552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300022722\|Ga0242657_1190320	Not Available	562	Open in IMG/M
3300022722\|Ga0242657_1222137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300025916\|Ga0207663_10591406	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300025931\|Ga0207644_10783086	Not Available	797	Open in IMG/M
3300025944\|Ga0207661_11548995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300025972\|Ga0207668_11660196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300025988\|Ga0208141_1020749	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300026078\|Ga0207702_10801054	Not Available	931	Open in IMG/M
3300026095\|Ga0207676_12331854	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300026507\|Ga0257165_1009717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1487	Open in IMG/M
3300026523\|Ga0209808_1059525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1707	Open in IMG/M
3300027173\|Ga0208097_1001340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2168	Open in IMG/M
3300027986\|Ga0209168_10174210	Not Available	1084	Open in IMG/M
3300030740\|Ga0265460_13023651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	506	Open in IMG/M
3300031028\|Ga0302180_10128733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1423	Open in IMG/M
3300031057\|Ga0170834_105983190	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300031114\|Ga0308187_10221422	Not Available	673	Open in IMG/M
3300031543\|Ga0318516_10668798	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031561\|Ga0318528_10000070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	21719	Open in IMG/M
3300031573\|Ga0310915_10331055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1078	Open in IMG/M
3300031668\|Ga0318542_10127240	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300031668\|Ga0318542_10387422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	721	Open in IMG/M
3300031668\|Ga0318542_10539692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300031672\|Ga0307373_10451951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	718	Open in IMG/M
3300031679\|Ga0318561_10491521	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031681\|Ga0318572_10563415	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300031708\|Ga0310686_118961971	Not Available	2034	Open in IMG/M
3300031708\|Ga0310686_119193831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1206	Open in IMG/M
3300031715\|Ga0307476_10897758	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300031715\|Ga0307476_10939920	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300031747\|Ga0318502_10391503	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300031769\|Ga0318526_10393363	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031770\|Ga0318521_10702291	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031777\|Ga0318543_10227802	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300031780\|Ga0318508_1047070	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300031782\|Ga0318552_10296226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	822	Open in IMG/M
3300031796\|Ga0318576_10602566	Not Available	517	Open in IMG/M
3300031798\|Ga0318523_10618316	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300031805\|Ga0318497_10829876	Not Available	518	Open in IMG/M
3300031833\|Ga0310917_10038526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2874	Open in IMG/M
3300031845\|Ga0318511_10057132	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300031890\|Ga0306925_11802540	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300031893\|Ga0318536_10633884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300031896\|Ga0318551_10561821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	657	Open in IMG/M
3300031910\|Ga0306923_10239814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	2074	Open in IMG/M
3300031912\|Ga0306921_10114038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3143	Open in IMG/M
3300031941\|Ga0310912_11361730	Not Available	537	Open in IMG/M
3300031946\|Ga0310910_11094780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300031954\|Ga0306926_11880288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300032008\|Ga0318562_10275550	Not Available	978	Open in IMG/M
3300032025\|Ga0318507_10109412	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300032025\|Ga0318507_10216021	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300032043\|Ga0318556_10092542	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300032059\|Ga0318533_11300662	Not Available	531	Open in IMG/M
3300032063\|Ga0318504_10464647	Not Available	605	Open in IMG/M
3300032067\|Ga0318524_10510116	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300032067\|Ga0318524_10589520	Not Available	585	Open in IMG/M
3300032068\|Ga0318553_10645878	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300032068\|Ga0318553_10662147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300032090\|Ga0318518_10459140	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300032205\|Ga0307472_101710293	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300032261\|Ga0306920_100712654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1478	Open in IMG/M
3300032261\|Ga0306920_100889755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1302	Open in IMG/M
3300032515\|Ga0348332_13660119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300032515\|Ga0348332_14611089	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300032805\|Ga0335078_12618923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300032828\|Ga0335080_11395670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300032892\|Ga0335081_10729424	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300033290\|Ga0318519_10456735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300033486\|Ga0316624_10677496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.10%
Host-Associated	Host-Associated	6.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.28%
Plants	Host-Associated → Plants	6.21%
Aquatic	Environmental → Aquatic	4.83%
Arthropoda	Host-Associated → Arthropoda	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.14%
Freshwater	Environmental → Aquatic → Freshwater	3.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.07%
Sediment	Environmental → Aquatic → Sediment	1.38%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.38%
Peat	Environmental → Terrestrial → Peat	0.69%
Cave	Environmental → Terrestrial → Cave	0.69%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.41%
Loam	Environmental → Terrestrial → Soil → Loam	7.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.38%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.38%
Clay	Environmental → Terrestrial → Soil → Clay	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.69%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.38%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.38%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.38%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.07%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.38%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.38%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.69%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.69%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025988	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1181649381	3300002568	Soil	WTVVQNSPDGPKIGSGGGYADRMVKQDGVWRFHYRKIDRFIAG*
Ga0062385_100336363	3300004080	Bog Forest Soil	MVMQNSPQGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP*
Ga0063356_1062996032	3300004463	Arabidopsis Thaliana Rhizosphere	WTVVQNSPPNSPGGPKIGSGGGYADRMVKQDGAWLFRYRKIDRFIAD*
Ga0070666_103054981	3300005335	Switchgrass Rhizosphere	VQNSEQGPKLGSAGSYTDDMVKQDGTWLFRYRKIDRFIHDKA*
Ga0070671_1005536132	3300005355	Switchgrass Rhizosphere	RSNWTVVQNSPQGPKIGSGGGYADRMVKQDGAWRFRYRKIDRFIKD*
Ga0070714_1002478673	3300005435	Agricultural Soil	NWTVVQNSPTGPKIGSGGGYADQMAKEDGHWRFRYRKIDRFIAG*
Ga0070681_101959812	3300005458	Corn Rhizosphere	SNWTVVQNSPEGPKIGSGGGYADQMVKQNGTWLFRYRKIDRFIA*
Ga0070698_1022169992	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	QNSPEGPKVGSGGAYQDELVKERGQWLFRYRKIDRFIAP*
Ga0070741_102618244	3300005529	Surface Soil	GPRVGSGGSYADTVVKQDGRWRFQQRKIDRFIKP*
Ga0070733_110052422	3300005541	Surface Soil	WMTVQNSAEGPKIGSAGSYSDDIVKQDGGWLFRYRKIDRFIHD*
Ga0070732_101779371	3300005542	Surface Soil	RSNWTTVQNSPQGPKIGSGGAYDDDMAKVNGRWYFRYRTIDRYIRPDSE*
Ga0070761_106051592	3300005591	Soil	KVGSAGAYRDQVVKRDGRWLFQYRKIDRYIAEGLT*
Ga0070761_107939101	3300005591	Soil	VMQNSPQGPKIGSGGAYADEIVQQNGRWLFRYRKIDRFIAG*
Ga0070763_105049633	3300005610	Soil	TVRSNWTVVQNSPTNSPGGPKIGSGGGYADQVVKEGGRWLFRYRKIDRFIAD*
Ga0075277_10886661	3300005895	Rice Paddy Soil	RSNWTVVQNSPPGAQGGPKIGSGGAYADRMVKQGDRWLFRYRKIDRFIAG*
Ga0075024_1008731721	3300006047	Watersheds	HGPKIGSAGSYTDDMVKQDGQWMFSYRKIDRFIHDKA*
Ga0075026_1006745501	3300006057	Watersheds	QNSPQGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP*
Ga0070712_1002546213	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GPKIGSGGAYHDELVKEHGQWLFRYRKIDRFIAP*
Ga0079219_120215512	3300006954	Agricultural Soil	WVTVQNSDQGPKIGSAGSYSDDIVKQGEEWLFRYRKIDRFIHD*
Ga0099791_105392802	3300007255	Vadose Zone Soil	RSNWTVVQNSPEGPKVGSGGAYQDELVEEHGQWLFRYRKIDRFIAA*
Ga0099795_104905902	3300007788	Vadose Zone Soil	EGPKIGSGGGYKDEMVKEDGGWLFRYRKIDRFIAA*
Ga0066710_1048753652	3300009012	Grasslands Soil	VQNSPHGPKIGSGGAYADQMVKADGRWLFRYRKIDRFIVP
Ga0099829_106226772	3300009038	Vadose Zone Soil	VVQNSPEGPKIGSGGAYADQMAKQGERWLFRYRKIDRFIA*
Ga0099828_117782272	3300009089	Vadose Zone Soil	EGPKVGSGGAYQDELVKEHGHWLFRYRKIDRFIAP*
Ga0066709_1034069172	3300009137	Grasslands Soil	VQNSPEGPKIGSGGGYHDELVKESGSWLFRYRKIDRFIAP*
Ga0116854_10338813	3300009400	Soil	SNWTTVQNSPDGPKIGSGGAYEDAMVKQGGKWLFRYRTIDRYIRPEE*
Ga0105249_107384911	3300009553	Switchgrass Rhizosphere	TAEIRSNWTVVQNSPDGPKIGSGGGYADRMVKQGGTWLFHYRKIDRFIAG*
Ga0123355_116874971	3300009826	Termite Gut	PKVSSAGGYADDMVKRNGRWLFELRKIDRFIAEGKF*
Ga0126384_109702972	3300010046	Tropical Forest Soil	RSNWIVAQNSPEGPKVGSGGAYHDEFVNEHGHWLFRYRKIDRFIAP*
Ga0126373_129059191	3300010048	Tropical Forest Soil	NWMVMQNNPLGPRIGSGGAYLDDMVRAEGRWLFRYRKIDRFIVP*
Ga0126376_123725501	3300010359	Tropical Forest Soil	PHGPKVGSGGAYIDEMVSADGRWLFRYRKIDRFIAP*
Ga0126378_109023131	3300010361	Tropical Forest Soil	GPKIGSGGAYRDELVNEHGQWLFRYRKIDRFIAP*
Ga0126378_111110921	3300010361	Tropical Forest Soil	GPKIGSGGAYRDELVKEHGQWLFRYRKIDRFIAP*
Ga0136449_1019985441	3300010379	Peatlands Soil	SPEGPKIGSGGAYADQMVKRDGRWLFRYRKIDRFIA*
Ga0134124_110111142	3300010397	Terrestrial Soil	MMGSSGSRIGSGGAYQDEMIKQGGEWLFHYRKIDRFIAP*
Ga0126383_100100941	3300010398	Tropical Forest Soil	VVVQNGPEGPKVGSGGAYRDDLVKEHGQWLFRYRKIDRFIAP*
Ga0137392_102461831	3300011269	Vadose Zone Soil	NWMVVQNSPHGPQVGSGGAYEDEMVQEDGQWLFRYRKINRFIAPD*
Ga0137382_102958752	3300012200	Vadose Zone Soil	SNWTVVQNSPEGPKIGSGGGYLDQMVKQDGRWLFRYRKIDRFIAG*
Ga0137363_111919032	3300012202	Vadose Zone Soil	VQNSPEGPRIGSGGGYKDEMVKEGGSWLFRYRKIDRFIAP*
Ga0137399_101638141	3300012203	Vadose Zone Soil	SPEGPKVGSGGAYQDELVKERGQWLFRYRKIDRFIAP*
Ga0137371_111027022	3300012356	Vadose Zone Soil	QGPKIGSGGGYADQMVKADGRWLFRYRKIDRFIVP*
Ga0137371_111670682	3300012356	Vadose Zone Soil	SNWTVVQNSPEGPKVGSGGAYHDELVKEHGQWLFRYRKIDRFIAS*
Ga0137360_113975582	3300012361	Vadose Zone Soil	EGPKIGSGGGYLDQMVKENGRWLFRYRKIDRFIA*
Ga0137361_105917071	3300012362	Vadose Zone Soil	NSPEGPKIGSGGAYVDEMAKQGGKWLFRYRKIDRFIA*
Ga0137395_103771561	3300012917	Vadose Zone Soil	PEGPKIGSGGAYADQMVKQNGSWLFRYRKIDRFIAG*
Ga0137395_112465482	3300012917	Vadose Zone Soil	SNWTVVQNSPDGPKIGSGGAYADQMVKQDGKWLFRYRKIDRFIAA*
Ga0137416_104296311	3300012927	Vadose Zone Soil	EGPKIGSGGGYRDEMVKEGGSWLFRYRKIDRFIAP*
Ga0126375_109624052	3300012948	Tropical Forest Soil	QNSPAGPKIGSGGAYHDELVKEHRQWLFCYRKIDRFIAS*
Ga0126369_122493331	3300012971	Tropical Forest Soil	NWTVVQNSPQGPKVGSGGGYHDEMMKEDRSWLFHYRKIDRFIAP*
Ga0126369_124855932	3300012971	Tropical Forest Soil	SNWMVMQNSPQGPRIGSGGAYLDEMVNADGRWLFRYRKIDRFIVP*
Ga0120150_10594861	3300013294	Permafrost	WTVVQNSPEGPKIGSGGGYADQMVKENGKWLFRYRKIDRFIAG*
Ga0157374_102522283	3300013296	Miscanthus Rhizosphere	WVTVQNSEQGPKLGSAGSYTDDMVKQDGTWLFRYRKIDRFIHDKA*
Ga0120172_11167832	3300013765	Permafrost	SNWTVVQNSPEGPKIGSGGGYADQMVKENGKWLFRYRKIDRFIAG*
Ga0134078_102656791	3300014157	Grasslands Soil	KIGSGGAYHDQMVKQGGRWLFRYRKIDRFIAADSSR*
Ga0181535_105998782	3300014199	Bog	NWTVVQNSPDGPKIGSGGAYADEMAKAGGSWLFRYRKIDRFIA*
Ga0182016_105989722	3300014493	Bog	PKIGSAGAYADQMVKHDGRWYFRYRKIDRYIADGLH*
Ga0182041_102006153	3300016294	Soil	VMQNSSQGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP
Ga0182032_1000349310	3300016357	Soil	MVVQNSPQGPKVGSGGAYIDEMVSADGRWLFRYRKIDRFIAP
Ga0182032_100617341	3300016357	Soil	NWMVMQNDSQGPRIGSGGAYLDEMVRKDGSWRFRYRKIDRFIVP
Ga0182032_103128712	3300016357	Soil	PQGPRIGSGGAYIDDMVRADGRWLFRYRKIDRFIAP
Ga0182032_114533552	3300016357	Soil	VVQNGPEGPKIGSGGAYHDELVKEHGQWLFRYRKIDRFIAP
Ga0182034_110318781	3300016371	Soil	SPQGPKVGSGGAYIDEMVSADGRWLFRYRKIDRFIAP
Ga0187802_104151561	3300017822	Freshwater Sediment	MQNSPQGPKIGSGGAYIDEMVKVAGQWLFRYRKIDRFIAP
Ga0187872_101802162	3300018017	Peatland	SDAGPKVSSAGGYADDMVKQDGRWLFRYRKIDRFIGEGKF
Ga0187867_107494791	3300018033	Peatland	NGPKIGSGGAYQDQVVKQNGNWLFRYRKIDRFLADGLT
Ga0197907_107746372	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	PGGPKIGSGGGYADRMVKQNGAWLFRYRKIDRFIHD
Ga0210401_110358212	3300020583	Soil	NSPHGPIISSGGVYADEMVKRDGQWLFHYRKIDRFIAAD
Ga0210401_116043752	3300020583	Soil	EGPKIGSGGAYHDELVKVGGQWLFRYRKIDRFIAP
Ga0154015_13787152	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	VQNSPPNSPGGPKIGSGGGYADRMVKQNGAWLFRYRKIDRFIHD
Ga0210386_115448092	3300021406	Soil	QGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP
Ga0213878_105538752	3300021444	Bulk Soil	VQNSDQGPKIGSAGSYTDEVVKQDGRWLFRYRKIDRFIHDRT
Ga0187846_101702352	3300021476	Biofilm	SPQGPRIGSGGAYLDEMVRNGGSWLFRYRKIDRFIVP
Ga0126371_127419602	3300021560	Tropical Forest Soil	QNSPEGPKIGSGGAYLDEITQQDGRWLFLHRKIDRFIVG
Ga0242663_10698172	3300022523	Soil	NSPDGPKIGSGGAYQDELVKVGGQWLFRYRKIDRFIAP
Ga0242662_101695522	3300022533	Soil	REGPKVGSGGAYQDELVKEQGHWLFRYRKIDRFIAP
Ga0242657_11903201	3300022722	Soil	PEGPKIGSGGAYQDELVKAGGQWLFRYRKIDRFIAP
Ga0242657_12221371	3300022722	Soil	WTVVQNSPDGPKINSGGAYADEMVKQGGAWLFRHRKIDRFIAG
Ga0207663_105914062	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	KGPKIGSGGAYHDQMVKLGGRWLFRYRKIDRFIAA
Ga0207644_107830862	3300025931	Switchgrass Rhizosphere	QGPKIGSGGGYADRMVKQDGAWRFRYRKIDRFIKD
Ga0207661_115489951	3300025944	Corn Rhizosphere	QNSPDGPKIGSGGGYADRMIKQGSAWLFHYRKIDRFIAA
Ga0207668_116601961	3300025972	Switchgrass Rhizosphere	QNSPDGPKIGSGGGYADRMVKQGGTWLFHYRKIDRFIAG
Ga0208141_10207491	3300025988	Rice Paddy Soil	RSNWTVVQNSPPGAQGGPKIGSGGAYADRMVKQGDRWLFRYRKIDRFIAG
Ga0207702_108010542	3300026078	Corn Rhizosphere	SDQGPKIGSAGSYSDDVVKHDDKWLFRYRKIDRYIHE
Ga0207676_123318542	3300026095	Switchgrass Rhizosphere	NSPDGPKIGSGGGYADRMVKQGGTWLFHYRKIDRFIAG
Ga0257165_10097173	3300026507	Soil	PEGPRIGSGGAYQDELVKVGGQWLFRYRKIDRFIAP
Ga0209808_10595253	3300026523	Soil	WTVVQNSPEGPKIGSGGGYLDQMVKQDGRWLFRYRKIDRFIAA
Ga0208097_10013404	3300027173	Forest Soil	SPDGPKIGSGGAYQDELVKVGGQWLFRYRKIDRFIAP
Ga0209168_101742101	3300027986	Surface Soil	SPEGPQIGSGGGYADEMVKQDGAWLFRYRKIDRFIKAE
Ga0265460_130236512	3300030740	Soil	MVMQNSPQGPKIGSGGAYADEIVEQNGRWLFRYRKIDRFIAG
Ga0302180_101287331	3300031028	Palsa	PKIGSGGAYDDDMVKVDGDWFFKYRTIDRYIRPEA
Ga0170834_1059831902	3300031057	Forest Soil	WVTVQNSPQGPKIGSAGSYTDEMVKQDGKWLFRYRKIDRFIHDKA
Ga0308187_102214222	3300031114	Soil	VRSNWTVVQNSPPNSPGGPKIGSGGGYADRMVKQDGAWLFRYRKIDRFIAP
Ga0318516_106687981	3300031543	Soil	IQNSPQGPRVGSGGAYIDEMVRTDGRWLFRYRKIDRFIAP
Ga0318528_1000007017	3300031561	Soil	TRPNWTVVQNSPAGPKIGSGWAHRDELVKEHGQWLFRYRKIDRFIAP
Ga0310915_103310551	3300031573	Soil	TVVQNSPEGPEIGSGGSYQDELINEHGQWLFRYRKIDRFIAP
Ga0318542_101272402	3300031668	Soil	MVLQNGPQGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP
Ga0318542_103874221	3300031668	Soil	WMVMQNSPQGPKIGSGGAYADEIVQQGGRWLFRYRKIDRFIAG
Ga0318542_105396922	3300031668	Soil	QNSPEGPKIGSGGAYRDELVREHGRWLFRYRKIDRFIAS
Ga0307373_104519512	3300031672	Soil	NWMVAANSADGPKVGSGGGYADEMVRTAEGWRFRYRKIDRFIWAD
Ga0318561_104915212	3300031679	Soil	SPQGPKVGSGGAYHDELVKEHTQWLFRYRKIDRFLAA
Ga0318572_105634151	3300031681	Soil	MQNSSQGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP
Ga0310686_1189619711	3300031708	Soil	QNTDAGPKVSSAGGYADDMVKQDGRWLFRYRKIDRFIGEGKF
Ga0310686_1191938311	3300031708	Soil	QNSPQGPKIGSGGGYADKIVRQNGHWLFHYRKIDRFIAG
Ga0307476_108977582	3300031715	Hardwood Forest Soil	RSNWTTVQNSPEGPKIGSGGAYDDDMTKEGGLWLFRYRTIDRYIRPEA
Ga0307476_109399202	3300031715	Hardwood Forest Soil	QNSPEGPKIGSGGAYADEIVQQNGRWLFHYRKIDRFIAG
Ga0318502_103915032	3300031747	Soil	LQNGPQGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP
Ga0318526_103933632	3300031769	Soil	QGPKVGSGGAYIDEMVSADGRWLFRYRKIDRFIAP
Ga0318521_107022911	3300031770	Soil	NWIVMQNDPQGPRIGSGGAYLDEMVRSEGSWLFRYRKIDRFIAA
Ga0318543_102278022	3300031777	Soil	VIQNSPQGPRVGSGGAYIDEMVRTDGRWLFRYRKIDRFIAP
Ga0318508_10470702	3300031780	Soil	AGPKIGSGWAHRDELVKEHGQWLFRYRKIDRFIAP
Ga0318552_102962261	3300031782	Soil	SPEGPKIGSGGAYHDELVKEHGQWLFRYRKIDRFIA
Ga0318576_106025662	3300031796	Soil	MVMQSSPQGPRIGSGGAYLDEMVRSGTSWRLRYRKIDRFIVP
Ga0318523_106183161	3300031798	Soil	VVQNSPQGPKVGSGGAYIDEMVSADGRWLFRYRKIDRFIAP
Ga0318497_108298762	3300031805	Soil	RSNWMVMQSSPQGPRIGSGGAYLDEMVRSGTSWRLRYRKIDRFIVP
Ga0310917_100385261	3300031833	Soil	SNWTVVQNSPAGPKIGSGWAHRDELVKEHGQWLFRYRKIDRFIAP
Ga0318511_100571322	3300031845	Soil	NWMVIHNSPQGPRVGSGGAYIDEMVRTDGRWLFRYRKIDRFIAP
Ga0306925_118025402	3300031890	Soil	GPKIGSAGSYTDDVVKQDGRWLFRYRKIDRFIHDKA
Ga0318536_106338842	3300031893	Soil	AQNSPEGPKIGSGGAYRDELVREHGRWLFRYRKIDRFIAS
Ga0318551_105618211	3300031896	Soil	SNWTVVQNGPEGPKIGSGGAYHDELVKEHGQWLFRYRKIDRFIAP
Ga0306923_102398143	3300031910	Soil	VQNGPEGPKIGSGGAYHDELVKEHGQWLFRYRKIDRFIAP
Ga0306921_101140381	3300031912	Soil	ARSNWTVVQNSPQGPKVGSGGAYHDELVKEHTQWLFRYRKIDCFLAA
Ga0310912_113617302	3300031941	Soil	WMVMQNSPQGPRIGSGGAYLDEMVRVGGRWLFRYRKIDRFIVP
Ga0310910_110947801	3300031946	Soil	PEGPKIGSGGAYHDELVKEHGQWLFRYRKIDRFIAP
Ga0306926_118802881	3300031954	Soil	AEGPKIGSGGGYADEMVKQNSQWLFRHRKIDRFIAD
Ga0318562_102755501	3300032008	Soil	QGPKIGSAGSYTDDLVRQDGRWLFRYRKIDRFIHDKA
Ga0318507_101094123	3300032025	Soil	SNWMVVQNSPQGPKVGSGGAYIDEMVSADGRWLFRYRKIDRFIAP
Ga0318507_102160212	3300032025	Soil	PQGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP
Ga0318556_100925421	3300032043	Soil	MVMQNSSQGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP
Ga0318533_113006621	3300032059	Soil	QGPRIGSGGAYLDEMVRVGGRWLFRYRKIDRFIVP
Ga0318504_104646472	3300032063	Soil	DPHRPRIGSGGAYHDEMVRSEGSWRFRYRKIDRFIAA
Ga0318524_105101161	3300032067	Soil	VQNSPQGPKVGSGGAYIDEMVSADGRWLFRYRKIDRFIAP
Ga0318524_105895201	3300032067	Soil	VQNSPAGPKIGSGWAHRDELVKEHGQWLFRYRKIDRFIAP
Ga0318553_106458782	3300032068	Soil	PQGPKVGSGGAYIDEMVSADGRWLFRYRKIDRFIAP
Ga0318553_106621471	3300032068	Soil	VQNSSDGPKIGSGGAYQDELIRAHGQWLFRYRKIDRFIAP
Ga0318518_104591402	3300032090	Soil	NWMVLQNGPQGPRVGSGGAYIDEMVRADGRWLFRYRKIDRFIAP
Ga0307472_1017102931	3300032205	Hardwood Forest Soil	SNWMVMQNGPQGPRIGSGGAYLDEMVRADGRWLFRYRKIDRFIAP
Ga0306920_1007126542	3300032261	Soil	SPQGPRIGSGGAYLDKMVKADGRWLFRYRKIDRFIVT
Ga0306920_1008897553	3300032261	Soil	QNGPEGPKIGSGGAYHDELVKEHGQWLFRYRKIDRFIAP
Ga0348332_136601192	3300032515	Plant Litter	VIALDGARAEARSNWMVIQNSPQGPKIGSGGGYADKIMRQNGHWLFHYRKIDRFIAG
Ga0348332_146110891	3300032515	Plant Litter	WTTVQNSPEGPKIGSGGAYDDDMVKADGRWYFRQRTIDRYIRPEQE
Ga0335078_126189231	3300032805	Soil	SDAGPKVSSAGGYHDDMVKQDGRWLFRYRKIDRFIGEGKF
Ga0335080_113956702	3300032828	Soil	SPDGPKIGSGGAYDDDMVKEGGRWLFRYRTIDRYIRPEE
Ga0335081_107294241	3300032892	Soil	QGPKIGSGGAYIDEMVKVGGQWLFRYRKIDRFIAP
Ga0318519_104567352	3300033290	Soil	VQNSEQGPKIGSAGSYTDDVVKQDGRWLFRYRKIDRFIHDKA
Ga0316624_106774962	3300033486	Soil	QGPKIGSAGSYIDDFVKQNGRWLFRYRKIDRFIHDKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050557

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences