Metagenome / Metatranscriptome Family F050547

Basic Information
Family ID	F050547
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	57 residues
Representative Sequence	IFVVTDFDGTVASQLGQSAGATDFCVFVFGQTGELLAQWHSVPSADELAAAIKKSD
Number of Associated Samples	123
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	85.52 %
% of genes from short scaffolds (< 2000 bps)	80.69 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Most Common Taxonomy
Group	Unclassified (66.897 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.103 % of family members)
Environment Ontology (ENVO)	Unclassified (23.448 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.207 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 17.86% Coil/Unstructured: 65.48%
Feature Viewer

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Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00581	Rhodanese	63.45
PF00899	ThiF	20.00
PF05237	Obsolete Pfam Family	11.72
PF03734	YkuD	1.38
PF04909	Amidohydro_2	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.38
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.38

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.90 %
All Organisms	root	All Organisms	33.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.90 %
cellular organisms	root	All Organisms → cellular organisms	33.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.90 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.90 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	17.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.90 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	13.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	13.10 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01EYJJR	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100610616	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300001431\|F14TB_100699454	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300004156\|Ga0062589_100646327	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300004463\|Ga0063356_101039481	Not Available	1174	Open in IMG/M
3300004479\|Ga0062595_100492927	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300004479\|Ga0062595_102485086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	516	Open in IMG/M
3300004480\|Ga0062592_101075999	Not Available	742	Open in IMG/M
3300005093\|Ga0062594_101183935	Not Available	756	Open in IMG/M
3300005169\|Ga0066810_10140861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300005174\|Ga0066680_10224653	Not Available	1190	Open in IMG/M
3300005180\|Ga0066685_10757023	Not Available	662	Open in IMG/M
3300005290\|Ga0065712_10516965	Not Available	631	Open in IMG/M
3300005295\|Ga0065707_10414149	Not Available	838	Open in IMG/M
3300005329\|Ga0070683_100059863	All Organisms → cellular organisms → Bacteria	3538	Open in IMG/M
3300005331\|Ga0070670_101621649	Not Available	595	Open in IMG/M
3300005332\|Ga0066388_102045002	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005332\|Ga0066388_104713673	Not Available	694	Open in IMG/M
3300005338\|Ga0068868_101255603	Not Available	687	Open in IMG/M
3300005340\|Ga0070689_100777407	Not Available	841	Open in IMG/M
3300005365\|Ga0070688_100698114	Not Available	786	Open in IMG/M
3300005366\|Ga0070659_101091188	Not Available	703	Open in IMG/M
3300005367\|Ga0070667_102088290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005406\|Ga0070703_10299000	Not Available	670	Open in IMG/M
3300005446\|Ga0066686_10234882	Not Available	1235	Open in IMG/M
3300005446\|Ga0066686_10504144	Not Available	824	Open in IMG/M
3300005451\|Ga0066681_10940831	Not Available	517	Open in IMG/M
3300005468\|Ga0070707_101839603	Not Available	573	Open in IMG/M
3300005548\|Ga0070665_100191235	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300005569\|Ga0066705_10744765	Not Available	587	Open in IMG/M
3300005574\|Ga0066694_10074138	Not Available	1569	Open in IMG/M
3300005576\|Ga0066708_10308313	Not Available	1014	Open in IMG/M
3300005576\|Ga0066708_10705680	Not Available	638	Open in IMG/M
3300005576\|Ga0066708_10963882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300005598\|Ga0066706_10028888	All Organisms → cellular organisms → Bacteria	3508	Open in IMG/M
3300005764\|Ga0066903_107623903	Not Available	558	Open in IMG/M
3300005937\|Ga0081455_10926266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300006175\|Ga0070712_101198100	Not Available	661	Open in IMG/M
3300006852\|Ga0075433_11568477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300006871\|Ga0075434_100883517	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300006954\|Ga0079219_11571288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300007788\|Ga0099795_10065429	Not Available	1359	Open in IMG/M
3300007788\|Ga0099795_10474580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300009012\|Ga0066710_100101186	All Organisms → cellular organisms → Bacteria	3855	Open in IMG/M
3300009148\|Ga0105243_12549476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300009156\|Ga0111538_12402003	Not Available	662	Open in IMG/M
3300009176\|Ga0105242_10717478	Not Available	980	Open in IMG/M
3300010047\|Ga0126382_11072320	Not Available	712	Open in IMG/M
3300010048\|Ga0126373_11515579	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300010303\|Ga0134082_10426581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300010358\|Ga0126370_10237967	Not Available	1403	Open in IMG/M
3300010359\|Ga0126376_11168891	Not Available	782	Open in IMG/M
3300010359\|Ga0126376_12902545	Not Available	529	Open in IMG/M
3300010361\|Ga0126378_11442329	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300010366\|Ga0126379_12398870	Not Available	627	Open in IMG/M
3300010366\|Ga0126379_12904611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300010373\|Ga0134128_12469167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300010376\|Ga0126381_102388197	Not Available	759	Open in IMG/M
3300010398\|Ga0126383_11663746	Not Available	727	Open in IMG/M
3300010398\|Ga0126383_12188567	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012198\|Ga0137364_10746677	Not Available	739	Open in IMG/M
3300012211\|Ga0137377_11414413	Not Available	624	Open in IMG/M
3300012285\|Ga0137370_10716407	Not Available	621	Open in IMG/M
3300012357\|Ga0137384_10583147	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300012361\|Ga0137360_10522779	Not Available	1011	Open in IMG/M
3300012489\|Ga0157349_1041385	Not Available	519	Open in IMG/M
3300012683\|Ga0137398_11223625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300012908\|Ga0157286_10070922	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300012918\|Ga0137396_10920149	Not Available	639	Open in IMG/M
3300012924\|Ga0137413_10706907	Not Available	765	Open in IMG/M
3300012929\|Ga0137404_11769053	Not Available	574	Open in IMG/M
3300012948\|Ga0126375_10591347	Not Available	846	Open in IMG/M
3300012951\|Ga0164300_10740091	Not Available	601	Open in IMG/M
3300012957\|Ga0164303_10034334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2116	Open in IMG/M
3300012958\|Ga0164299_11470860	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012984\|Ga0164309_11375925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300012986\|Ga0164304_10758614	Not Available	744	Open in IMG/M
3300012987\|Ga0164307_11167827	Not Available	636	Open in IMG/M
3300012989\|Ga0164305_12080628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	520	Open in IMG/M
3300013297\|Ga0157378_11125552	Not Available	823	Open in IMG/M
3300014969\|Ga0157376_10643456	Not Available	1060	Open in IMG/M
3300015053\|Ga0137405_1233105	Not Available	730	Open in IMG/M
3300015262\|Ga0182007_10128702	Not Available	850	Open in IMG/M
3300015371\|Ga0132258_12122571	Not Available	1412	Open in IMG/M
3300015373\|Ga0132257_101323813	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300015374\|Ga0132255_102301703	Not Available	822	Open in IMG/M
3300015374\|Ga0132255_104206491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300016341\|Ga0182035_10343850	Not Available	1237	Open in IMG/M
3300016357\|Ga0182032_10245444	Not Available	1389	Open in IMG/M
3300018028\|Ga0184608_10279970	Not Available	733	Open in IMG/M
3300018072\|Ga0184635_10331081	Not Available	589	Open in IMG/M
3300018075\|Ga0184632_10093404	Not Available	1317	Open in IMG/M
3300018076\|Ga0184609_10531418	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300018081\|Ga0184625_10189761	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300018081\|Ga0184625_10622534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300018431\|Ga0066655_10659129	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300018482\|Ga0066669_10500731	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300019361\|Ga0173482_10383378	Not Available	648	Open in IMG/M
3300019362\|Ga0173479_10765946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300019882\|Ga0193713_1123911	Not Available	709	Open in IMG/M
3300019883\|Ga0193725_1111620	Not Available	634	Open in IMG/M
3300020008\|Ga0193757_1028494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300021510\|Ga0222621_1055127	Not Available	834	Open in IMG/M
3300022694\|Ga0222623_10028109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2125	Open in IMG/M
3300025960\|Ga0207651_10547928	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300026301\|Ga0209238_1043018	Not Available	1642	Open in IMG/M
3300026305\|Ga0209688_1044858	Not Available	835	Open in IMG/M
3300026316\|Ga0209155_1217692	Not Available	596	Open in IMG/M
3300026323\|Ga0209472_1285073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300028881\|Ga0307277_10036251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1980	Open in IMG/M
3300030844\|Ga0075377_10043864	Not Available	1645	Open in IMG/M
3300031231\|Ga0170824_115325264	Not Available	546	Open in IMG/M
3300031446\|Ga0170820_11187462	Not Available	728	Open in IMG/M
3300031668\|Ga0318542_10510243	Not Available	625	Open in IMG/M
3300031941\|Ga0310912_10305161	Not Available	1232	Open in IMG/M
3300031944\|Ga0310884_10216419	Not Available	1031	Open in IMG/M
3300031946\|Ga0310910_10106440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2090	Open in IMG/M
3300032013\|Ga0310906_10882696	Not Available	637	Open in IMG/M
3300032076\|Ga0306924_11533330	Not Available	705	Open in IMG/M
3300032205\|Ga0307472_100278433	Not Available	1330	Open in IMG/M
3300033289\|Ga0310914_10452520	Not Available	1162	Open in IMG/M
3300033289\|Ga0310914_11332445	Not Available	620	Open in IMG/M
3300033412\|Ga0310810_11229327	Not Available	602	Open in IMG/M
3300033475\|Ga0310811_11421779	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.69%
Host-Associated	Host-Associated	19.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.17%
Plants	Host-Associated → Plants	19.31%
Aquatic	Environmental → Aquatic	5.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.66%
Sediment	Environmental → Aquatic → Sediment	5.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.83%
Loam	Environmental → Terrestrial → Soil → Loam	10.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.14%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.07%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.07%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.38%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.38%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.69%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_13057890	2170459009	Grass Soil	DILVVTDFDGTVASQLGQSAGATDFCVFVFGQTGELLAQWHTVPSADELASAVKK
2222005921	2209111022	Grass Soil	ASQLGQSAEETNFCVFVFGQSGELLAQWHSVPSADELAAAVKKSG
INPhiseqgaiiFebDRAFT_1006106161	3300000364	Soil	VTDFDGTVASQLGTQPGSAGFRVFVFGPNGELLTQWSDVPSAEQLAAALX*
F14TB_1006994542	3300001431	Soil	QKISRDARSDIFVVADFEGTIASQLGQPAGVTDFCVFVFGQTGKLLAQWHSVPSTDELAAALKKSD*
Ga0062589_1006463271	3300004156	Soil	RDAKSDIFIATDFDGTIASQLGQTAEATDFCVFVFGQDGKLLAEWHSVPSTNELSAALKKSD*
Ga0063356_1010394812	3300004463	Arabidopsis Thaliana Rhizosphere	QKISRDAKSDIFVVTDFDGTVASQLGQPAGATEFCVFVFGQTGDLLAQWHSVPSADELAAAIKKSD*
Ga0063356_1029665121	3300004463	Arabidopsis Thaliana Rhizosphere	GQSPEATDFCVFVFGQSGELLAQWHSVPSTEELAAALKKSD*
Ga0063356_1029665131	3300004463	Arabidopsis Thaliana Rhizosphere	GQSPEATDFCVFVFGQSGELLAQWHSVPSTEELAAAVRKSD*
Ga0062595_1004929271	3300004479	Soil	DIFVATDFDGTVASQLGQPAEATDFCVFVFGQSGELLAQWHSVPSTHELAAAIKKSD*
Ga0062595_1024850862	3300004479	Soil	QARYDAQKIARDAKSDLFVVTDFEGTIASQLGQSAEATDFCVFVFGRTGELLAQWHNVPSADELAAVLKKSD*
Ga0062592_1010759992	3300004480	Soil	AKSDIFVVTDFDGTIASQLGQSAEATDFCVFVFGQSGELFAQWHSVPSADELAAAVKK*
Ga0062594_1011839351	3300005093	Soil	RYDAQKISRDAKSDIFVVTDFDGTIASQLGQSVEATDFCVFVFGQTGELLAQWHAVPSTDELARALKKSD*
Ga0066810_101408612	3300005169	Soil	FVVTDFDGTIASQLGQSAEATDFCVFAFGQSGELLAQWHSVPSADELATAVKK*
Ga0066680_102246532	3300005174	Soil	QKISRDAKSDIFVVTDFDGTVASQLGQSEGARDFCVFVFGQTGELLAQWHSVPSVDELAAAIKKSD*
Ga0066685_107570232	3300005180	Soil	DGTVASQLGQSAGATDFCVFVFGQTGELLAQWHSVPSADELAAAIKKSD*
Ga0065712_105169652	3300005290	Miscanthus Rhizosphere	VVTDFDGTIASQLGQSPEATDFCVFVFGQSGELIAQWHSVPSTEELAAAVKKSD*
Ga0065707_104141491	3300005295	Switchgrass Rhizosphere	IASQLGQTAEATDFCVFVFGQDGKLLAEWHSVPSTNELSAALKKSD*
Ga0070683_1000598635	3300005329	Corn Rhizosphere	RLQARYDAQKISRDAKSDIFVVTDFDGTIASQLGQSPEATDFCVFVFGQSGELLAQWHSVPSTEELAAALKKSD*
Ga0070670_1016216491	3300005331	Switchgrass Rhizosphere	KSDIFVVTDFDGAIASQLGQPAGATEFCVFVFGKSGQLEAQWHSVPSMDELAAAIKKSKSD*
Ga0066388_1020450022	3300005332	Tropical Forest Soil	TDFDGTIASQLGQSSGETDFRVFVFGKNGELLAQWHGVPSTDELAAVLKKSD*
Ga0066388_1047136731	3300005332	Tropical Forest Soil	AKSDIFVVTDFDGTIASQLGQSAGATDFRVFVFGKSGELSAQWHSVPSTDELAAAIRKSD
Ga0070680_1010452261	3300005336	Corn Rhizosphere	IASQLGQSAEATDLCVFVFGQNGELLAQWQNVPSADELAAAVKKSD*
Ga0068868_1012556032	3300005338	Miscanthus Rhizosphere	FVVTDFDGTIASQLGQSPEATDFCVFVFGQSGELLAQWHSVPSTEELAAALKKSD*
Ga0070689_1007774071	3300005340	Switchgrass Rhizosphere	VVTDFDGTIASQLGQSPEATDFCVFVFGQSGELIAQWHSVPSTEELAAALKKSD*
Ga0070688_1006981141	3300005365	Switchgrass Rhizosphere	SRDAKSDIFVVTDFDGTIASQLGQSPEATDFCVFVFGQSGELLAQWHTVPSAEELAAAVKKSD*
Ga0070659_1010911881	3300005366	Corn Rhizosphere	SDIFVVTDFDGAIASQLGQPAGATEFCVFVFGKSGELIAQWHSVPSMDELAAAIKKSKSD
Ga0070667_1020882901	3300005367	Switchgrass Rhizosphere	TIASQLGQSPEATDFCVFVFGQSGELIAQWHSVPSTEELAAAVKKSD*
Ga0070703_102990001	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	RYDAQKIVRDAKSDIFVVIDFDGTSASQLGQSASATDFCVFVFGQTGELLALWHSVPSADELATAVKKSD*
Ga0070713_1019763302	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TIASQLGQSPEATDFCVFVFGQSGELKAQWHSVPSTDELATAVKKSD*
Ga0066686_102348821	3300005446	Soil	AKGISRDASRDIFVVTDFDGTVASNLGQPAGVNEFCVFVFGRTGELLAQWHDVPSAEQLASALK*
Ga0066686_105041441	3300005446	Soil	VTDFDGTVASQLGQSAGATDFCVFVFGQTGELLGQWHSVPSADELAAAVKKSD*
Ga0066681_109408312	3300005451	Soil	VTDFDGTIASQLDQSTEATDFCVFVFGRTGELMAQWHSVPSATELAAALK*
Ga0070707_1018396031	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DAKSDIFVVTDFDGTAASQLGQPAGATDFCVFVFGRTGELLAQWHSVPSADELAAAVKKSD*
Ga0070665_1001912353	3300005548	Switchgrass Rhizosphere	DIFVVTDFDGTIASQLGQSPEATDFCVFVFGQSGELIAQWHSVPSTEELAAALKKSD*
Ga0066705_107447651	3300005569	Soil	DASRDIFVVTDFDGTVASNLGQPAGANEFCVFVFARTGELLAQWHDVPSADQLASALK*
Ga0066694_100741382	3300005574	Soil	ISRDAKSDIFVVTDFDGTIASQLGQPTGATDFCVFVFGQTGKLLAQWHSVPSADELTAAVKKSD*
Ga0066708_103083132	3300005576	Soil	SRDAKSDIFVVTDFDGTVASQLGQSAGATDFCVFVFGQTGELLGQWHSVPSADELAAAVKKSD*
Ga0066708_107056802	3300005576	Soil	VTDFDGTIASQLGQPTGATDFCVFVFGQTGKLLAQWHSVPGADELTAAVKKSD*
Ga0066708_109638821	3300005576	Soil	VTDFDGTIASQLGQPTGATDFCVFVFGQTGKLLAQWHSVPSADELTAAVKKSD*
Ga0066706_100288885	3300005598	Soil	RDAKSDIFVVTDFDGTAASQLGQPAGAIDFCVFVFGRTGELLAQWHSVPSAGELGAAIKKSD*
Ga0066903_1053089692	3300005764	Tropical Forest Soil	ASQLGQPAGATDFQVFVFGQTGKLLAQWHSIPSSDELAAALKKSD*
Ga0066903_1076239031	3300005764	Tropical Forest Soil	ISRDASRDIFVVTDFDGTVASNLGQPAEANEFCVFVFGRTGELIAQWHDVPSADQLASALK*
Ga0081455_109262661	3300005937	Tabebuia Heterophylla Rhizosphere	KSDIFVVTDFDGTIASQLGQSEGATDFSVFVFGQTGELLAQWHSVPSADELAAVIKKSD*
Ga0081540_13192551	3300005983	Tabebuia Heterophylla Rhizosphere	AEATDFCVFVFGKDGKLLAQWHSVPSTDELAAAVKKSN*
Ga0070712_1006085972	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ASQLGQSAEATDFCVFVFGQNGELLAQWQSVPSADELAAAIKKSD*
Ga0070712_1011981002	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DGTIASQLGQSADATDFCVFVFGQSGELLAQWHSVPSADELAAVVKK*
Ga0075433_115684771	3300006852	Populus Rhizosphere	ATDFDGTIASQFGQPAGGTDFCVFVFGQDGKLLAEWHSVPSTNELSAALKKSD*
Ga0075434_1008835172	3300006871	Populus Rhizosphere	RSDIFVVTDFDGAVASQLGQSAGATDFCVFVFGRTGELLAQWHNVPSAEELAAAVKKSD*
Ga0079219_115712882	3300006954	Agricultural Soil	AKNDIFVATDFDGTIASQFGQPAGATDFYVLIFGKAGELVAQWHSIPNRDELASALKKSD
Ga0099795_100654291	3300007788	Vadose Zone Soil	IFVVTDFDGTVASQLGQSAGATDFCVFVFGQTGELLAQWHSVPSADELAAAIKKSD*
Ga0099795_104745802	3300007788	Vadose Zone Soil	FDGTVASQLGQSAGATDFCVFVFGQSGELLAQWHSIPSADELAAAVKKSG*
Ga0066710_1001011861	3300009012	Grasslands Soil	SRDASRDIFVVTDFDGTVASNLGQPAGANEFCVFVFARTGELLAQWHDVPSADQLASALK
Ga0105243_125494762	3300009148	Miscanthus Rhizosphere	FVVTDFDGTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPGADELAAAVKKSD*
Ga0111538_124020031	3300009156	Populus Rhizosphere	RDARSDIFVATDFDGTVASQLGQPAEATDFCVFVFGQSGELLAQWHSVPSTHELAAAIKKSD*
Ga0105242_107174782	3300009176	Miscanthus Rhizosphere	FDGAVASQLGQSTGATDFCVFVFGKNGELLAQWHRVPSADELAAVIKESD*
Ga0126382_110723201	3300010047	Tropical Forest Soil	AKSDVHVITDFDGTIASQLGQAAEATDFCVFVFGQDGKLLAEWHRVPSTNELSAALKKSD
Ga0126373_115155791	3300010048	Tropical Forest Soil	IFVVTDFDGTVASQLGQPAGATDFCVFVFGPTGELLTQWHSVPSADELAAALKK*
Ga0126373_129359811	3300010048	Tropical Forest Soil	IASQLGQPMGAPDFYVFVFGKTGKLLAQWRSVPSSDELAAALKKSD*
Ga0134082_104265812	3300010303	Grasslands Soil	AQKISREAKSDIFVVTDFDGTVASQLGQSAGATDFCVFVFGQTGELLGQWHSVPSADELAAAVKKSD*
Ga0126370_102379672	3300010358	Tropical Forest Soil	YDAQKISRDARSDIFVVTDFDGTIASQLGQPMGVTDFYVFVFGKTGKLLAQWRSVPSSDELAAALKKSD*
Ga0126376_111688912	3300010359	Tropical Forest Soil	DFDGTIASQLGQPMGVTDFYVFVFGKTGKLLAQWRSVPSSDELAAALKKSD*
Ga0126376_129025451	3300010359	Tropical Forest Soil	GILRDASRDIFVATDFDGTLASNLGQPEGANEFRVFVFGRTGELLAQWHDVPSADQLASVLK*
Ga0126378_114423292	3300010361	Tropical Forest Soil	VTDFDGTIASQLGQPAGATDFRVFVFGKSGELLAQWHSVPSTIELAAAMK*
Ga0126379_123988702	3300010366	Tropical Forest Soil	VVTDFDGTIASQFGQPTGATDFCVFVFGKSGELLAQWHRVPSADELAAVLKKSD*
Ga0126379_129046111	3300010366	Tropical Forest Soil	KSDIFVVTDFEGTIASQLGQSTGETDFRVFVFGKNGELLAQWHGVPSTDELAAVLKKSD*
Ga0134128_124691672	3300010373	Terrestrial Soil	AQKISRDAKSDIFVVTDFDGTIASQLGQSPEATDFCVFVFGQSGELIAQWHSVPSTEELAAALKKSD*
Ga0126381_1010318382	3300010376	Tropical Forest Soil	FVVTDFDGTVASQFGEVGRLNDFCAFVFGPTGELRAQWNDVPSAEQLSAALKRP*
Ga0126381_1023881971	3300010376	Tropical Forest Soil	GTIASQLGQPSGATDFCVFVFGQTGKLLAQWHSVPSTDELAAALKKSD*
Ga0126383_116637461	3300010398	Tropical Forest Soil	SDIFVATDFDGTIASQFGQPAGATDFCVLVFGKAGELVAQWHSVPSADELASALKKSD*
Ga0126383_121885671	3300010398	Tropical Forest Soil	ISRDAKSDIFIATDFDGTIASQFGQPVGATDFCVFVFGQDGKLLAEWHSVPSTNELSAALKKSD*
Ga0137364_107466771	3300012198	Vadose Zone Soil	DAKSDIFVVTDFDGTVASQLGQSEGATDFCVFAFGQTGELLAQWHSVPSVDELAAAIKKSD*
Ga0137377_114144131	3300012211	Vadose Zone Soil	GISRNASRDVFVVTDFDGTVASSLGQPAGANEFCVFVFARTGELLAQWHDVPSADQLASALK*
Ga0137370_107164072	3300012285	Vadose Zone Soil	DAQKISRDAKGDIFVATDFDGTVASQLGQSAGATNFCVFVFGRTGELLGQWHSVPSTTELAGALK*
Ga0137384_105831471	3300012357	Vadose Zone Soil	SDIFVVTDFDGTAASQLGQSAGAIDFCVFVFGRTGELLAQWHSVPSAGELAAAIKKSD*
Ga0137368_106683401	3300012358	Vadose Zone Soil	SAGATDFCVFVFGQTGQLLAQWHSVPSADELAAAVKKSD*
Ga0137360_105227791	3300012361	Vadose Zone Soil	FVVTDFDGTVASSLGQPAGVNEFCVFVFRRTGELLAQWHDVPSAEQLASALK*
Ga0157349_10413851	3300012489	Unplanted Soil	DFDGTIASQLGQSAEATDLCVFVFGQNGELLAQWQNVPSADELAAAIKKSN*
Ga0137398_112236251	3300012683	Vadose Zone Soil	KKISRDAKSDVFVVTDFDGTVASQLGQSAGATDFCVFVFGKTGELLAQWHSVPSADELAAAIKKSD*
Ga0157286_100709222	3300012908	Soil	GQPAGATDFCVLVFGKAGELVAQWHSVPSADELASALKKSD*
Ga0137396_109201492	3300012918	Vadose Zone Soil	AKSDIFVVTDFDGTVASQLGQCAGATDFCVFVFGKTGELLAQWHSVPTADELAAAIKKSD
Ga0137413_107069072	3300012924	Vadose Zone Soil	RDAKSDIFVVTDFDGTVASQLGQSEGARDFCVFVFGQTGELLAQWHSVPSVDELAAAIKKSA*
Ga0137404_117690531	3300012929	Vadose Zone Soil	YDAQKISRDAKSDIFVVTDFDGTAASQLGQPAGAIDFCVFVLGRTGELLAQWHSVPSAGELAAAIKKSD*
Ga0126375_105913472	3300012948	Tropical Forest Soil	VTDFDGTVASQLGQVAGATDFCVFVFGQTGELLAQWHSVPNTDELAVAVKKSD*
Ga0164300_107400911	3300012951	Soil	GTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSTDELAAALKKSD*
Ga0164303_100343343	3300012957	Soil	DFDGTIASQLGQSLEATDFCVFVFGQSGELLAQWLSVPSAEELAAAVKKSD*
Ga0164303_103717701	3300012957	Soil	IASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADELAAAVKK*
Ga0164299_114708601	3300012958	Soil	DAQKISRDAKSDIFVVTDFDGTIASQLGQSADATDFCVFVVGQSGELLAQWHSVPSADELAAVVKK*
Ga0164309_113759251	3300012984	Soil	DAKSDIFVAADFDGTIASQLGQSAEAADFCVFVFGQNGELLAQWHSVPSADELAAAVKKSD*
Ga0164304_107586141	3300012986	Soil	KISRDAKSDIFVVTDFDGTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADSLAAALKKSD*
Ga0164307_111678271	3300012987	Soil	SDIFVVTDFDGTAASQLGQPAGATDFCVLVFGRTGELLAQWHSVPSADKLASALKKSD*
Ga0164305_120806282	3300012989	Soil	QARYDAQKISRDAKSDIFVATDFDGTIASQFGQPAGATDFRVLVFGKAGELVAQWHSVPSADELASALKKSD*
Ga0157378_111255522	3300013297	Miscanthus Rhizosphere	TIASQLGQTAEATDFCVFVFGQDGKLLAEWHSVPSTNELSAALKKSD*
Ga0157372_108240311	3300013307	Corn Rhizosphere	SPEATDFCVFVFGQSGELKAQWHSVPSTDELATAVKKSD*
Ga0157376_106434561	3300014969	Miscanthus Rhizosphere	DAKSDIFVVTDFDGTIASQLGQSPEATDFCVFVFGQSGELIAQWHSVPSTDELAAAVKKSD*
Ga0137405_12331052	3300015053	Vadose Zone Soil	DATIASQLGQSPGATDFCVFVFGQTGKLLAQWHSVPSADELAAAMKKPD*
Ga0182007_101287022	3300015262	Rhizosphere	DAKSDIFVVTDFDGTIASQLGQSPGATDFCVFVFGKTGELLAQWHSVPSTNELATAVKK*
Ga0132258_121225712	3300015371	Arabidopsis Rhizosphere	GTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADELAAAVKKSD*
Ga0132257_1013238131	3300015373	Arabidopsis Rhizosphere	KSDIFVVTDFDGTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADSLAAALKKSD*
Ga0132255_1008398371	3300015374	Arabidopsis Rhizosphere	GATDFCVFVFGKNGELLAQWHRVPSADELAAVIEKSD*
Ga0132255_1023017032	3300015374	Arabidopsis Rhizosphere	FDGTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADELAAAVKK*
Ga0132255_1033848532	3300015374	Arabidopsis Rhizosphere	IASQLGQSAEATDFCVFVFGQNGELLAQWQNVPSADELAAAVKKSD*
Ga0132255_1042064912	3300015374	Arabidopsis Rhizosphere	YDAQKIAGDAKSDIFVATDFDGTIALQLSQSAEATDFCVFVFGKTGELLTQWRSVPSADELAAAVKK*
Ga0182035_103438502	3300016341	Soil	YDAHKISRDAKNDIFVVTDFDGTIASQLGQAAGATDFVVFVFGENGKLLAQWHNVPSEEELAKALKKSE
Ga0182032_102454442	3300016357	Soil	AKSDVHVITDFDGTIASQLGQTAEATDFCVFVFGQDGKLLTEWHSVPSTNALSASLKKSD
Ga0163161_102606781	3300017792	Switchgrass Rhizosphere	IASQLGQSPEATDFCVFVFGQSGELKAQWHSVPSTDELATAVKKSD
Ga0184608_102799701	3300018028	Groundwater Sediment	SDAKRDIFVVTAFDGTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADELAAAVKK
Ga0184635_103310812	3300018072	Groundwater Sediment	DIFVVTDFDGTVASQLGHSAGATDFCVFVFGKTGELLAQWHSVPSADELAAAVKKFD
Ga0184632_100934042	3300018075	Groundwater Sediment	KSDIFVVTDFDGTVASQLGHSAGATDFCVFVFGKTGELLAQWHSVPSADELAAAIKKSD
Ga0184609_105314181	3300018076	Groundwater Sediment	DAEKISRDAKSDIFVVTDFDGTVASQLGQSAGATDFCVFVFGQTGELLAQWHSVPSADELAAAVKKSD
Ga0184625_101897612	3300018081	Groundwater Sediment	KISRDAKSDIFVVTDFDGTIASQLGQSAEATDFCVFVFGQSGELLALWHSVPSADELAAAVKK
Ga0184625_106225342	3300018081	Groundwater Sediment	AKNDIFVVTDFDGTVASQLGHSAGATDFCVFVFGQTGELLAQWHSVPSADELAAAVKKFD
Ga0066655_106591292	3300018431	Grasslands Soil	VNDFDGTVASNLGQPAEVNEFCVFVFGRTGELLAQWHDVPSTEQLASALK
Ga0066669_105007312	3300018482	Grasslands Soil	SRDAKSDIFVVTDFDGTIASQLGQPTGATDFCVFVFGQTGKLLAQWHSVPSADELTAAVKKSD
Ga0173482_103833782	3300019361	Soil	RDAKGDIFVATDFDGTVASQLGQSAGATDFCVFVFGRTGELLAQWHRVPSATELAGALK
Ga0173479_107659461	3300019362	Soil	SDIFVVTDFDGTIASQLGQSPEATDFCVFVFGQSGELIAQWHSVPSTEELAAALKKSD
Ga0193713_11239111	3300019882	Soil	KNDIFVVTDFDGTAASQLGQPAGATDFCVFVFGRAGELLAQWHSVPSADELAAAVKKSD
Ga0193725_11116201	3300019883	Soil	TDFDGTVASQLGQSAGATDFCVFVFGQTGELLAQWHSVPSVDELAAAIKKSD
Ga0193757_10284942	3300020008	Soil	RRISRDAKSDIFVVTDFDGAVASQLGQSAGATDFCVFVFGKTGKLLAQWHCVSSADELAAAIKKSD
Ga0222621_10551271	3300021510	Groundwater Sediment	SSDAKRDIFVVTDFDGTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADELAAAVK
Ga0222623_100281091	3300022694	Groundwater Sediment	SDIFVVTDFEGTIASQLGQSAGATDFCVFVFGQTGELLAQWHSVPSPDELAAAVKKSD
Ga0179589_105073132	3300024288	Vadose Zone Soil	QLGQSAEETNFCVFVFGQSGELLAQWRSVPSADELAAAVKKSG
Ga0207651_105479281	3300025960	Switchgrass Rhizosphere	DAKSDILVVTDFDGTIASQLGQSPEATDFCVFVFGQSGELLAQWHSVPSTEELAAALKKS
Ga0209238_10430182	3300026301	Grasslands Soil	ISRDAKSDIFVVTDFDGTIASQLGQPTGATNFCVFVFGQTGKLLAQWHSVPSADELTAAVKKSD
Ga0209688_10448581	3300026305	Soil	FVVTDFDGTIASQLGQPTGATDFCVFVFGQTGKLLAQWHSVPGADELTAAVKKSD
Ga0209155_12176921	3300026316	Soil	IASQLGQPTGATDFCVFVFGQTGKLLAQWHSVPGADELTAAVKKSD
Ga0209472_12850731	3300026323	Soil	AKSDIFVVTDFDGTVASQLGQSAGATDFCVFVFGQTGELLGQWHSVPSADELAAAVKKSD
Ga0307311_100550331	3300028716	Soil	EATDFCVFVFGQSGELLAQWHSVPSADELAAAVKK
Ga0307292_101043002	3300028811	Soil	GTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADELAAAVKK
Ga0307277_100362511	3300028881	Soil	KKISRDAKSDIFVVTDFDGTVASQLGQYAGATDFCVFVFGKTGKLLAQWHSVSSADELAAAIKKSD
Ga0075377_100438642	3300030844	Soil	RDAKSDIFVVTDFDGTVASQFGQPAGATDFCVFVFGQTGKLLAQWHSVPSSDELAAAVKKSD
Ga0075386_121103422	3300030916	Soil	LGQSAEATDFCVFVFGRSGELLAQWRSVPSADELAAAVKK
Ga0170824_1153252641	3300031231	Forest Soil	SDIFVVTDFDGTVVSQLGQSAGATDFCVFVFGKTGELLAQWHSVPSADGLTAVIKKSD
Ga0170820_111874621	3300031446	Forest Soil	KSDIFVATDFDGTIASQFGQPAGATDFCVLVFGKAGKLVARWHNVPSADELASALKKSD
Ga0318542_105102432	3300031668	Soil	HVITDFDGTIASQLGQTAEATDFCVFVFGQDGKLLTEWHRVPSTNELSAALKKSD
Ga0310912_103051611	3300031941	Soil	DVHVITDFDGTIASQLGQTAEATDFCVFVFGQDGKLLTEWHSVPSTNELSASLKKSD
Ga0310884_102164191	3300031944	Soil	AKSDIFIVTDFDGTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADELAAAVKKSH
Ga0310910_101064403	3300031946	Soil	AKSDVHVITDFDGTIASQLGQTAEATDFCVFVFGQDGKLLTEWHSVPSTNELSASLKKSD
Ga0310906_108826961	3300032013	Soil	SRDAKSDIFVVTDFDGTIASQLGQSAEATDFCVFVFGQSGELLAQWHSVPSADELAAAVK
Ga0306924_115333301	3300032076	Soil	SRDAKSDVHVITDFDGTIASQLGQTAEATDFCVFVFGQDGKLLTEWHSVPSTNALSASLKKSD
Ga0306924_121542261	3300032076	Soil	LASEFGQSAGATDFCVFVFGQTGELLAQWHNVPSADELAAALKTSD
Ga0307472_1002784331	3300032205	Hardwood Forest Soil	RYDTQKISRDAKSDIFVVTDFDGTVASQLGQSAGATDFCVFVFGQTGELVAQWHSVPSADQLAAAIKKSD
Ga0310914_104525201	3300033289	Soil	VITDFDGTIASQLGQTAEATDFCVFVFGQDGKLLTEWHSVPSTNELSASLKKSD
Ga0310914_113324452	3300033289	Soil	VITDFDGTIASQLGQTAEATDFCVFVFGQDGKLLAEWHSVPSTNELSAALKKSD
Ga0310810_112293272	3300033412	Soil	GQKIGRDAKSDIFVVTDFDGTIASQLGQSPGATNFCVFVFGKTGELFAQWHSVPSTNELAAAVKKAD
Ga0310811_114217792	3300033475	Soil	IVRDAKSDIFVVTDFDGTSASQLGQSASATDFCVFVFGQTGELLALWHSVPSADELATAVKKSD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050547

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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