Metagenome / Metatranscriptome Family F050536

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050536
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	53 residues
Representative Sequence	MRKLAISLGFAAIFVALGRFLFAPAFLAERADGATRILLAAGLFTIAIAAVVRK
Number of Associated Samples	113
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.83 %
% of genes near scaffold ends (potentially truncated)	22.07 %
% of genes from short scaffolds (< 2000 bps)	79.31 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.345 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (14.483 % of family members)
Environment Ontology (ENVO)	Unclassified (28.276 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.897 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.10% β-sheet: 0.00% Coil/Unstructured: 43.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF07732	Cu-oxidase_3	41.38
PF05697	Trigger_N	18.62
PF05698	Trigger_C	8.28
PF01544	CorA	6.21
PF00574	CLP_protease	2.76
PF08298	AAA_PrkA	1.38
PF00202	Aminotran_3	0.69
PF16491	Peptidase_M48_N	0.69
PF05362	Lon_C	0.69
PF04860	Phage_portal	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	41.38
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	26.90
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	6.21
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	5.52
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	5.52
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	2.76
COG2766	Predicted Ser/Thr protein kinase	Signal transduction mechanisms [T]	1.38
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.69
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.34 %
Unclassified	root	N/A	29.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.34 %
Unclassified	root	N/A	29.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.34 %
Unclassified	root	N/A	29.66 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.28 %
Unclassified	root	N/A	29.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.07 %
Unclassified	root	N/A	29.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	60.00 %
Unclassified	root	N/A	29.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	20.69 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	6.21 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.76 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.07 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	20.69 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	6.21 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.76 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2.07 %
unclassified Methylocystaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.66 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	20.69 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	6.21 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.76 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	2.07 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.66 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	20.69 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	6.21 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.76 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	2.07 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01D4D3W	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	528	Open in IMG/M
3300001546\|JGI12659J15293_10000207	All Organisms → cellular organisms → Bacteria → Proteobacteria	19364	Open in IMG/M
3300001546\|JGI12659J15293_10000733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10640	Open in IMG/M
3300001593\|JGI12635J15846_10526897	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300002245\|JGIcombinedJ26739_100147298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2224	Open in IMG/M
3300002245\|JGIcombinedJ26739_100521381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1065	Open in IMG/M
3300002245\|JGIcombinedJ26739_101500006	Not Available	569	Open in IMG/M
3300003219\|JGI26341J46601_10214028	Not Available	520	Open in IMG/M
3300003368\|JGI26340J50214_10080283	Not Available	855	Open in IMG/M
3300004080\|Ga0062385_10071824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1583	Open in IMG/M
3300004080\|Ga0062385_10275813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	951	Open in IMG/M
3300004080\|Ga0062385_10350866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	865	Open in IMG/M
3300004082\|Ga0062384_100562664	Not Available	766	Open in IMG/M
3300004082\|Ga0062384_100808365	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300004082\|Ga0062384_101115167	Not Available	570	Open in IMG/M
3300004091\|Ga0062387_100348852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	976	Open in IMG/M
3300004091\|Ga0062387_101726163	Not Available	509	Open in IMG/M
3300004092\|Ga0062389_102339191	Not Available	706	Open in IMG/M
3300004092\|Ga0062389_102941427	Not Available	637	Open in IMG/M
3300004635\|Ga0062388_101370555	Not Available	709	Open in IMG/M
3300005435\|Ga0070714_100927407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	846	Open in IMG/M
3300005591\|Ga0070761_10091523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1744	Open in IMG/M
3300005591\|Ga0070761_10395313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	843	Open in IMG/M
3300005591\|Ga0070761_10402955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	834	Open in IMG/M
3300005764\|Ga0066903_106375007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	616	Open in IMG/M
3300006052\|Ga0075029_100583151	Not Available	746	Open in IMG/M
3300006102\|Ga0075015_100761378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	579	Open in IMG/M
3300006175\|Ga0070712_101159589	Not Available	672	Open in IMG/M
3300009093\|Ga0105240_11426453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	727	Open in IMG/M
3300009523\|Ga0116221_1534904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	514	Open in IMG/M
3300009633\|Ga0116129_1036930	All Organisms → cellular organisms → Bacteria → Proteobacteria	1580	Open in IMG/M
3300009824\|Ga0116219_10028441	All Organisms → cellular organisms → Bacteria	3384	Open in IMG/M
3300010049\|Ga0123356_11355895	Not Available	873	Open in IMG/M
3300010339\|Ga0074046_10702788	Not Available	594	Open in IMG/M
3300010373\|Ga0134128_12167370	Not Available	612	Open in IMG/M
3300010376\|Ga0126381_104124352	Not Available	564	Open in IMG/M
3300010396\|Ga0134126_10262886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2037	Open in IMG/M
3300010880\|Ga0126350_12175619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	855	Open in IMG/M
3300011120\|Ga0150983_15857974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1041	Open in IMG/M
3300011411\|Ga0153933_1112209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	575	Open in IMG/M
3300012955\|Ga0164298_11577298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	516	Open in IMG/M
3300013104\|Ga0157370_10348420	All Organisms → cellular organisms → Bacteria → Proteobacteria	1365	Open in IMG/M
3300013105\|Ga0157369_12521194	Not Available	520	Open in IMG/M
3300014199\|Ga0181535_10138017	All Organisms → cellular organisms → Bacteria → Proteobacteria	1539	Open in IMG/M
3300014200\|Ga0181526_10524288	Not Available	749	Open in IMG/M
3300014200\|Ga0181526_10732824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	623	Open in IMG/M
3300014201\|Ga0181537_10683227	Not Available	698	Open in IMG/M
3300014495\|Ga0182015_10187316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1389	Open in IMG/M
3300014501\|Ga0182024_10189443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2829	Open in IMG/M
3300014654\|Ga0181525_10821097	Not Available	525	Open in IMG/M
3300015206\|Ga0167644_1009467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	4941	Open in IMG/M
3300016270\|Ga0182036_10520638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	944	Open in IMG/M
3300016294\|Ga0182041_10678664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	912	Open in IMG/M
3300016294\|Ga0182041_11354630	Not Available	652	Open in IMG/M
3300017946\|Ga0187879_10134961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1401	Open in IMG/M
3300017955\|Ga0187817_10823784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300017970\|Ga0187783_10061726	Not Available	2764	Open in IMG/M
3300018009\|Ga0187884_10024453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3117	Open in IMG/M
3300018033\|Ga0187867_10158677	Not Available	1299	Open in IMG/M
3300018035\|Ga0187875_10360286	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300018037\|Ga0187883_10210603	All Organisms → cellular organisms → Bacteria → Proteobacteria	996	Open in IMG/M
3300018042\|Ga0187871_10037784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2977	Open in IMG/M
3300020580\|Ga0210403_10110650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2231	Open in IMG/M
3300020581\|Ga0210399_10263458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1438	Open in IMG/M
3300020582\|Ga0210395_10613794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	816	Open in IMG/M
3300020582\|Ga0210395_10685142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	767	Open in IMG/M
3300021181\|Ga0210388_10957579	Not Available	736	Open in IMG/M
3300021401\|Ga0210393_10144397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1910	Open in IMG/M
3300021401\|Ga0210393_10195510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1634	Open in IMG/M
3300021401\|Ga0210393_11615959	Not Available	514	Open in IMG/M
3300021402\|Ga0210385_10211303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1414	Open in IMG/M
3300021404\|Ga0210389_10249717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1388	Open in IMG/M
3300021404\|Ga0210389_11108957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	611	Open in IMG/M
3300021405\|Ga0210387_10215770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1669	Open in IMG/M
3300021405\|Ga0210387_11475649	Not Available	583	Open in IMG/M
3300021406\|Ga0210386_10877178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	769	Open in IMG/M
3300021406\|Ga0210386_10972152	Not Available	725	Open in IMG/M
3300021474\|Ga0210390_10991441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	687	Open in IMG/M
3300021479\|Ga0210410_11080990	Not Available	692	Open in IMG/M
3300024227\|Ga0228598_1019367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1341	Open in IMG/M
3300024347\|Ga0179591_1053118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2369	Open in IMG/M
3300025627\|Ga0208220_1078672	Not Available	915	Open in IMG/M
3300027117\|Ga0209732_1005451	Not Available	2108	Open in IMG/M
3300027334\|Ga0209529_1007697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1746	Open in IMG/M
3300027432\|Ga0209421_1021046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1258	Open in IMG/M
3300027505\|Ga0209218_1067934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	731	Open in IMG/M
3300027559\|Ga0209222_1106511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	542	Open in IMG/M
3300027574\|Ga0208982_1066820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	720	Open in IMG/M
3300027648\|Ga0209420_1025416	Not Available	1883	Open in IMG/M
3300027676\|Ga0209333_1006271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	3945	Open in IMG/M
3300027692\|Ga0209530_1003190	Not Available	5898	Open in IMG/M
3300027729\|Ga0209248_10002840	Not Available	5536	Open in IMG/M
3300027729\|Ga0209248_10136875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	732	Open in IMG/M
3300027737\|Ga0209038_10022168	All Organisms → cellular organisms → Bacteria → Acidobacteria	1872	Open in IMG/M
3300027783\|Ga0209448_10078447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	1108	Open in IMG/M
3300027795\|Ga0209139_10064683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	1282	Open in IMG/M
3300027812\|Ga0209656_10013528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	5100	Open in IMG/M
3300027824\|Ga0209040_10249830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	890	Open in IMG/M
3300027829\|Ga0209773_10196362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	843	Open in IMG/M
3300027853\|Ga0209274_10478263	Not Available	645	Open in IMG/M
3300027853\|Ga0209274_10547011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	599	Open in IMG/M
3300027884\|Ga0209275_10132752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1305	Open in IMG/M
3300027895\|Ga0209624_10000430	Not Available	37031	Open in IMG/M
3300027895\|Ga0209624_10000487	All Organisms → cellular organisms → Bacteria → Proteobacteria	34971	Open in IMG/M
3300027895\|Ga0209624_10402786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	912	Open in IMG/M
3300027908\|Ga0209006_10098106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2599	Open in IMG/M
3300027908\|Ga0209006_10432373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1105	Open in IMG/M
3300029636\|Ga0222749_10532588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300029943\|Ga0311340_10885343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	744	Open in IMG/M
3300029951\|Ga0311371_10156337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	3482	Open in IMG/M
3300030490\|Ga0302184_10330199	Not Available	606	Open in IMG/M
3300030707\|Ga0310038_10172069	Not Available	1056	Open in IMG/M
3300030878\|Ga0265770_1093341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	603	Open in IMG/M
3300031027\|Ga0302308_10147893	Not Available	1550	Open in IMG/M
3300031231\|Ga0170824_114286729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	617	Open in IMG/M
3300031234\|Ga0302325_10327201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2458	Open in IMG/M
3300031446\|Ga0170820_11230671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	508	Open in IMG/M
3300031525\|Ga0302326_11914348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	770	Open in IMG/M
3300031708\|Ga0310686_102194577	Not Available	510	Open in IMG/M
3300031708\|Ga0310686_103411688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1072	Open in IMG/M
3300031708\|Ga0310686_103883340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	819	Open in IMG/M
3300031708\|Ga0310686_113713087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4864	Open in IMG/M
3300031708\|Ga0310686_117052759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1217	Open in IMG/M
3300031718\|Ga0307474_11096146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	630	Open in IMG/M
3300031744\|Ga0306918_10592708	Not Available	869	Open in IMG/M
3300031823\|Ga0307478_10390717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1151	Open in IMG/M
3300031897\|Ga0318520_10716110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	626	Open in IMG/M
3300031910\|Ga0306923_11579503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	683	Open in IMG/M
3300031912\|Ga0306921_11304248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	803	Open in IMG/M
3300031954\|Ga0306926_10953526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1024	Open in IMG/M
3300031954\|Ga0306926_11721248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	715	Open in IMG/M
3300032008\|Ga0318562_10526952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	684	Open in IMG/M
3300032076\|Ga0306924_10809414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	1044	Open in IMG/M
3300032261\|Ga0306920_100883446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1308	Open in IMG/M
3300032770\|Ga0335085_10068252	All Organisms → cellular organisms → Bacteria	4716	Open in IMG/M
3300032783\|Ga0335079_10466693	Not Available	1351	Open in IMG/M
3300032805\|Ga0335078_10799119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1151	Open in IMG/M
3300032892\|Ga0335081_10170629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3069	Open in IMG/M
3300032896\|Ga0335075_10075176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4553	Open in IMG/M
3300032898\|Ga0335072_10665743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1028	Open in IMG/M
3300033134\|Ga0335073_10021238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	9034	Open in IMG/M
3300033134\|Ga0335073_10136518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	3124	Open in IMG/M
3300033134\|Ga0335073_11093046	Not Available	813	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.86%
Host-Associated	Host-Associated	4.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.34%
Aquatic	Environmental → Aquatic	25.52%
Plants	Host-Associated → Plants	2.76%
Arthropoda	Host-Associated → Arthropoda	0.69%
Fungi	Host-Associated → Fungi	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.21%
Freshwater	Environmental → Aquatic → Freshwater	23.45%
Peat	Environmental → Terrestrial → Peat	4.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.76%
Sediment	Environmental → Aquatic → Sediment	2.07%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.69%
Mycelium	Host-Associated → Fungi → Mycelium	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.45%
Loam	Environmental → Terrestrial → Soil → Loam	20.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.07%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.69%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	22.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.28%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.07%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.69%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.69%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	14.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.14%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.14%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.07%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.07%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.69%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.69%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.69%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_01805450	2170459009	Grass Soil	LCGEKGLSMRKVAISLGFAAIFGASGRFLFAPPFLARQADGATGILLAAGLFTIAIAAVVRK
JGI12659J15293_1000020713	3300001546	Forest Soil	MRKIALSLGFAAIFVGLGRFLFAPAFLAERSDGATRILLAAGLFTIAIAAVVRK*
JGI12659J15293_100007336	3300001546	Forest Soil	MREVAVSLGFAAIFVALGRFLFAPLFLAGRADGATGILLAAGLFTIAIAAVVPK*
JGI12635J15846_105268974	3300001593	Forest Soil	MRKLAISLGFAAIFVALGRFLFAPAFLAERADGATRILLAAGLFTIAIAAVVRK*
JGIcombinedJ26739_1001472983	3300002245	Forest Soil	MRKVAISLGFAAIFIALGRFLFAPAFLAERADGATRILLAAGLFTIAIAAVVRK*
JGIcombinedJ26739_1005213812	3300002245	Forest Soil	MRKVVISLGFTTIFAALGRFLFARAFLVERADGATRFLLAAGLFTIAIAAVVRK*
JGIcombinedJ26739_1015000062	3300002245	Forest Soil	MGKIAITLGFTAIFAALARFLVAPAFFAEHADGATGFLFAVGLFSVAIAAVVRK*
JGI26341J46601_102140282	3300003219	Bog Forest Soil	MRKLGLSLGFAAVCVALARLSFAPLFLAERADGATGLLLAAGLFTIAIAAVVRN*
JGI26340J50214_100802833	3300003368	Bog Forest Soil	QTCGEKGVTMRKLGLSLGFAAVCVALARLSFAPLFLAERADGATGLLLAAGLFTIAIAAVVRN*
Ga0062385_100718242	3300004080	Bog Forest Soil	MRKVIASLGFAAVCVALARLMFAPLFLTEPADGATGLLLGAGLFTIAIAAVVRK*
Ga0062385_102758131	3300004080	Bog Forest Soil	MRKLTASLGIAAVCLALARLMFAPLFLAESADRATGILLGAGLFTIAIAAVVRK*
Ga0062385_103508662	3300004080	Bog Forest Soil	MRKVALSLGFAAIFVALGRSLFAPAFLAERADGATRILLAAGLFTIAIAAVVRR*
Ga0062384_1005626642	3300004082	Bog Forest Soil	MLANFCGEEGLSMRKVAISQGFVAIFVAFGRFLFAPLFLTECGDGATGLQLAAGLFTFAIAAAVRK*
Ga0062384_1008083651	3300004082	Bog Forest Soil	MRKLMASLGFGAVCLALARLTLASRFLSERANGATGLVLWAGLFTIAIAALVRK*
Ga0062384_1011151671	3300004082	Bog Forest Soil	MRKVVISLGFTTIFAALGRFLFAPAVLVERADGTTRILLAAGLFTIAIAAVVGK*
Ga0062387_1003488521	3300004091	Bog Forest Soil	MRKVIASLGFAAVCVALARLMFAPLFLSERADGATGLLLGAGLFTIAIAAVVRK*
Ga0062387_1017261632	3300004091	Bog Forest Soil	MRNVAIFLGFAAIFIALGRFLFAPLFLAGRAEAATGILLAASLFTIAIAA
Ga0062389_1023391911	3300004092	Bog Forest Soil	MRKLMLSLGLAAVCVALARLMLAPLFITERADGATGLLLGAGLFTIAIAAAVRN*
Ga0062389_1029414272	3300004092	Bog Forest Soil	MRKVVISLGFTTIFAALGRFLFAPAFLVERADGATRILLAAGLFTIAIAAVVRK*
Ga0062388_1013705552	3300004635	Bog Forest Soil	MRKLMASLGFGAVCLALARLMFASQFLAERVNGATGLLLGAGLFTIAIAAVVRK*
Ga0070714_1009274072	3300005435	Agricultural Soil	MRKLAISLGFAAIFVASGRFLFAPPFLAGQADGATGILLAAGLFTIAIAAVVRK*
Ga0070761_100915232	3300005591	Soil	MRKLMLSLGFASVCVALARLMLAPPFIAGRADGATGLLLGAGLFAIAIAAVVRK*
Ga0070761_103953132	3300005591	Soil	MCKLAISLGFAAIFVALGRFLFAPAFLAERADGATRTLLAAGLFTIAIAAVVRK*
Ga0070761_104029552	3300005591	Soil	MRKLMASLGFAAACVALARLLFAPLFLAEHANDATGLLLGAGLFSIAIAAAVRK*
Ga0066903_1063750072	3300005764	Tropical Forest Soil	MRKLALSLGFAALSIALARLTFGPLLLAERAGGPAGLFLRASLFTIAIAAVLRE*
Ga0075029_1005831512	3300006052	Watersheds	MRKLMASLGFAAVCVALARLMFAALFLPERAIGATGVLLGAGLFTIPIAAVVRK*
Ga0075017_1003431883	3300006059	Watersheds	AALGRFLFAPAFLVERADGATRILLAAGLFTIAIAAIVRK*
Ga0075015_1007613782	3300006102	Watersheds	MLSLGTAAAGIALARFAFAPLFLAERADHATALLFAGGLFTIALAAVVRD*
Ga0070712_1011595893	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KLAIFVGPAAICIAFWRFLLAPFFLSERPRGATGLLLAAGLFTIAIAAIVRK*
Ga0105240_114264532	3300009093	Corn Rhizosphere	MRKLAIFLGFAAVCVAFGRFFFTPPFLAERAGGATGLLLAAGLFTIAIAAVVRK*
Ga0116221_15349043	3300009523	Peatlands Soil	GFAAVCVALGRFLFAPLFLAERASGATGLLLAAGLFTIAIAAVVRK*
Ga0116129_10369302	3300009633	Peatland	MRQIPISLGFAAIFVALGRFLFAPAFLAERPDGATRILLAAGLFTIAIAAVVRK*
Ga0116219_100284414	3300009824	Peatlands Soil	MRKGALSLGFAAVCVALGRFLFAPLFLAERASGATGLLLAAGLFTIAIAAVVRK*
Ga0123356_113558952	3300010049	Termite Gut	MRKLTLFLGIAAVCGAFLLSPLFSNGRASGATGLLVAAGLFTIAIAAVVGE*
Ga0074046_107027882	3300010339	Bog Forest Soil	MRKLGLSLGFAAVCVALARLSFAPLFLAERADGATGLLLAAGLFTIAIAAVVR
Ga0134128_121673702	3300010373	Terrestrial Soil	MRKLAIFLGVAEVCVALGRCLAAPLFLAEPAGDATRLLLTAGLFTIAIAAAVRK*
Ga0126381_1041243522	3300010376	Tropical Forest Soil	MRKVAISVGFALMWLAISRFLLARFFLAERVDGAIGLLLATGLFTIAIAAVVRK*
Ga0134126_102628862	3300010396	Terrestrial Soil	MRKLAIFLGFAAVCVAFGRFFFTPHFLAERAGGATGLLLAAGLFTIAVAAVVRK*
Ga0126350_121756192	3300010880	Boreal Forest Soil	MRKVAISLGFAAIFLALGRFLFAPAFLAERAGGATRILLAAGLFTIAIAAVVRK*
Ga0150983_158579743	3300011120	Forest Soil	GRLMRKLMLSLGFVAVCGALARLMLAPLFIAERVDGAIGLLLGAGLFTIAIAAVVRK*
Ga0153933_11122091	3300011411	Attine Ant Fungus Gardens	MRKVAISVGFAAMSVAVSRFLLVGLFLAERVDGAIGLLLATGLFTVAIAAVVRK*
Ga0164298_115772983	3300012955	Soil	ASGRFLFAPPFLAGPPDGATGILLAAGLFTIDIAAVVRK*
Ga0157370_103484202	3300013104	Corn Rhizosphere	MRKLAIFRGFAAVCVAFGRFFFMPPFLAERAGGATGLLLAAGLFTIAVAAVVRK*
Ga0157369_125211942	3300013105	Corn Rhizosphere	MRKLAIFLGFAAVCVAFGRFFFTPHFLAERAGGATGLLLAAGLFTIAIAAVVRK*
Ga0181535_101380172	3300014199	Bog	MRKLMASLGFAVVFVALARLMFAPLFLAEPANVATGLLLGAGLFTIAMAAAVRK*
Ga0181526_105242881	3300014200	Bog	MRKFMASLGFAAVCVALARLPFATLFLTERAKGATGLLLAAGLFTIAIAAAVRK*
Ga0181526_107328241	3300014200	Bog	VGEEGVTMRKLMASLGFAVVFVALARLMFAPLFLTERADGATGLLLGAGLFTIAIAAAVRK*
Ga0181537_106832271	3300014201	Bog	MASLGFVAVCVALARLAFASPFLTERAKGATGLLLSAGLFTVAIAAVVRK*
Ga0182015_101873163	3300014495	Palsa	MASLGFAAVCVAPAHLPFATLFLTERAKGATGLLLGAGLFTIAIAAAVRK*
Ga0182024_101894432	3300014501	Permafrost	MRKVVISLGFAAIFVALGRFLFAPLFLAGQADRATGILFAVGLVTVAIAAVVRK*
Ga0181525_108210971	3300014654	Bog	MRKFMASLGFAAVFVALARLMFAPLFLAERADGATGLLLGAGLFTIVIAAVAPK*
Ga0167644_10094676	3300015206	Glacier Forefield Soil	MRKVVISLGFAAIFVALGRFLFAPLFLAGQADRATGILFAVGLFTVAIAAVVRKRASDKLI*
Ga0182036_105206382	3300016270	Soil	MRKFGISLGFAAVCVAFGRFLFAPLFLADRADGATGLLLAAGLFTIAIAAVVRK
Ga0182041_106786642	3300016294	Soil	MRKLGISLGFAAVCVAFGRFLFAPLFLADRADGATGLLLATGLFTIAIAAVVRK
Ga0182041_113546302	3300016294	Soil	MRKLVLSLGFAAVCVALARLSFAPLFLAERADGATGLLLAAGVFTIAIAAIHRN
Ga0187879_101349612	3300017946	Peatland	VRKLMASLGFAAVCVALARLPFATLFLTERTKGATGLLLAAGLFTIAIAAVVRK
Ga0187817_108237841	3300017955	Freshwater Sediment	MRKLVLSLGFAAVCVALARLLLAPLFLAERGDGATGLLLAAGLFTIDIAAVV
Ga0187783_100617261	3300017970	Tropical Peatland	VRKVALSLGFTAVCVAFGRFLLAPFFLAERANGETGLLLAAGLFTIAIAAVVRK
Ga0187884_100244534	3300018009	Peatland	MASLGFAAVCVALARLPFATLFLTERAKGATGLLLGAGLFTIAIAAAVRK
Ga0187867_101586773	3300018033	Peatland	LGFAAVCVALARLPFATLFLTERTKGATGLLLAAGLFTIAIAAVVRK
Ga0187875_103602863	3300018035	Peatland	GFAAVYVALARLTFAPLFLTEGADRATGLLLGAGLFTIAIAAVVRK
Ga0187883_102106031	3300018037	Peatland	GFAAVCVALARLPFATLFLTERTKGATGLLLAAGLFTIAIAAVVRK
Ga0187871_100377844	3300018042	Peatland	MASLGFAAVCVALAHLPFATLFLTERAKGATGLLLGAGLFTIAIAAAVRK
Ga0210403_101106504	3300020580	Soil	MRKVAISLGFAAIFVALGRFLFAPAFLAERADRATRILLAAGLFTIAIAAVVRK
Ga0210399_102634582	3300020581	Soil	MRKVAISLGFAAIFVALGRFLFAPAFLAERADGATRTLLAAGLFTIAIAAVVRK
Ga0210395_106137942	3300020582	Soil	MICGEKGPSMREVAVSLGFAAIFVALGRFLFAPLFLAGRADGATGILLAAGLFTIAIAAVVRK
Ga0210395_106851422	3300020582	Soil	MRKLALSLGFAAVCTALARLVFAPLFLAERVDGAIGLLLGASLFTIAIAAVVGK
Ga0210388_109575792	3300021181	Soil	MRKVAISLGFAAIFIALGRFLFAPAFLVERADGATRILLAAGLFTIAIAAVVRK
Ga0210393_101443972	3300021401	Soil	MRKVVISLGFTTIFAALGRFLFAPAFLVERADGATRILLAAGLFTIAIAAVARK
Ga0210393_101955102	3300021401	Soil	MREVAVSLGFAAIFVALGRFLFAPLYLAGRADGATGILLAAGLFTIAIGAVVRK
Ga0210393_116159592	3300021401	Soil	MRKVAISLGFAATFVALGRFLFAPAFLAERADGATRILLAAGLF
Ga0210385_102113032	3300021402	Soil	MRKVVISLGFTTIFAALGRFLFAPAFLVERADGATRILLAAGLFTIAIAAVVRK
Ga0210389_102497172	3300021404	Soil	MRKVVISLGFTTIFAALGRFLFAPAFLVERADGATRILLA
Ga0210389_111089572	3300021404	Soil	MRKVAISLGFAGTFVALGRFLFAPAFLAERADGATRILLAAGLFTIAIAAVVRK
Ga0210387_102157702	3300021405	Soil	MRKVAISLGFAAIFVALGRFLFAPAFLAERADRATRILLAAGLFTIAISAVVRK
Ga0210387_114756492	3300021405	Soil	MREVAVSLGFAAIFVALGRFLFAPLFLAGRADGATGILLAAGLFTIAIAAVVRK
Ga0210386_108771782	3300021406	Soil	MASLGFAAVCVALARLPFATLFLTERAKGATGLLLAAGLFTIVIAAVVRK
Ga0210386_109721522	3300021406	Soil	MRKVAMSLGFAAICVAFGRFLFAPLFLAEPMDGATQVLFAAGLFTIAIAAVTRE
Ga0210390_109914412	3300021474	Soil	MRKVAISPGFASIFLAFGRFLSAPLFLTERADGATGLLLAAGLFTFAIAAAVPK
Ga0210410_110809902	3300021479	Soil	MICGEKGPSMREVAVSLGFAAIFVALGRFLFAPLFLAGRADGATGILLAAGLFTIAIAAVVPK
Ga0228598_10193672	3300024227	Rhizosphere	MRKVLISLGFTTIFAALWRFLFAPAFLVERADGATRILLAAGLFTIAIAAVVRK
Ga0179591_10531184	3300024347	Vadose Zone Soil	MGKVAITLGFTAIFAALASFLFAPAFLAERADGATGFLFAAGLFTIAIAAVVRK
Ga0208220_10786722	3300025627	Arctic Peat Soil	MGKVAISLGFAAIFVALGRFLFAPAFLAERADDATRILLAAGLFTIAIAAVVRK
Ga0209732_10054511	3300027117	Forest Soil	SLSMRRVAISLGFAAIFVALGRFLFAPAFFAERADGATRILLAAGLFTIAIAAVVRK
Ga0209529_10076971	3300027334	Forest Soil	AAILVGLGRFLFAPAFLAERSDGATRILLAAGLFTIAIAAVVRK
Ga0209421_10210462	3300027432	Forest Soil	MRKIALSLGFAAILVGLGRFLFAPAFLAERADGATRTLLAAGLFTIAIAAVVRK
Ga0209218_10679342	3300027505	Forest Soil	MRKVAISLGFAAIFIALGRFLFAPAFLAERADGATRILLAAGLFTIAIAAVVRK
Ga0209222_11065113	3300027559	Forest Soil	MRQVPISLGFAAIFVALGRFLFAPAFLAERPDGATRILLAAGLFTIAIAAVVRK
Ga0208982_10668201	3300027574	Forest Soil	MRKVVISLGFAAIFLALGRFLFAPAFLAERADGATRILLAAGLFTIAIAAVVRK
Ga0209420_10254163	3300027648	Forest Soil	IFVALGRFLFAPAFLAERADGATRTLLAAGLFTIAIAAVVRK
Ga0209333_10062713	3300027676	Forest Soil	MRKIALSLGFAAIFVALGRFLFAPAFLAERADGATRTLLAAGLFTIAIAAVVRK
Ga0209530_10031902	3300027692	Forest Soil	MRKVPISLGFAAIFVALGRFLFAPAFLVERADGATRILLAAGLFTIAIAAVVRK
Ga0209248_100028406	3300027729	Bog Forest Soil	MRKLTASLGIAAVCLALARLMFAPLFLAESADRATGILLGAGLFTIAIAAVVRK
Ga0209248_101368753	3300027729	Bog Forest Soil	MHKVAISLGFAAIFVALGRSLFAPAFLAERADGATRILLAAGLFTIAIAAVVRR
Ga0209038_100221683	3300027737	Bog Forest Soil	MHKVAISLGFAAIFVALGRFLFAPAFLAERADGATRILLAAGLFTIAIAAVVRR
Ga0209448_100784472	3300027783	Bog Forest Soil	MRKVAISLGFAAIFVALGRFLFAPAFLAERADGATRILLAAGLFTIAIAAVVRR
Ga0209139_100646833	3300027795	Bog Forest Soil	MGRNAISLGFTAIFVALGRFLFAPAFLAERADGATRILLAAGLFTVAIAAVVRK
Ga0209656_100135283	3300027812	Bog Forest Soil	MRKLGLSLGFAAVCVALARLSFAPLFLAERADGATGLLLAAGLFTIAIAAVVRN
Ga0209040_102498302	3300027824	Bog Forest Soil	MRKVIASLGFAAVCVALARLMFAPLFLTEPADGATGLLLGAGLFTIAIAAVVRK
Ga0209773_101963622	3300027829	Bog Forest Soil	MRKLMASLGFGAVCLALARLTLASRFLSERANGATGLVLWAGLFTIAIAALVRK
Ga0209274_104782631	3300027853	Soil	KGLSMRKLAISLGFAAIFVALGRFLFAPAFLAERADGATRTLLAAGLFTIAIAAVVRK
Ga0209274_105470112	3300027853	Soil	MRKLMLSLGFASVCVALARLMLAPPFIAGRADGATGLLLGAGLFAIAIAAVVRK
Ga0209275_101327522	3300027884	Soil	MCKLAISLGFAAIFVALGRFLFAPAFLAERADGATRTLLAAGLFTIAIAAVVRK
Ga0209624_1000043015	3300027895	Forest Soil	MREVAVSLGFAAIFVALGRFLFAPLFLAGRADGATGILLAAGLFTIAIAAVVPK
Ga0209624_100004873	3300027895	Forest Soil	MRKIALSLGFAAIFVGLGRFLFAPAFLAERSDGATRILLAAGLFTIAIAAVVRK
Ga0209624_104027862	3300027895	Forest Soil	MRKVVISLGFTTIFAALGRFLFARAFLVERADGATRFLLAAGLFTIAIAAVVRK
Ga0209006_100981062	3300027908	Forest Soil	MGKIAITLGFTAIFAALARFLVAPAFFAEHADGATGFLFAVGLFSVAIAAVVRK
Ga0209006_104323732	3300027908	Forest Soil	MRKVAISLGFAAIFIALGRFLFAPAFLAERADGATRILLAAGLFTIAIAAAVRK
Ga0222749_105325881	3300029636	Soil	RGEERLSMRKVVISLGFTTIFAALGRFLFAPAFLVERADGATRILLAAGLFTIAIAAVVR
Ga0311340_108853432	3300029943	Palsa	MRKLMLSLGFAAVCVALARFMLAPLFIAGRADGPTGLLLGAGLFTIAIAAVVRK
Ga0311371_101563372	3300029951	Palsa	MASLGFAAVCVAPAHLPFATLFLTERAKGATGLLLGAGLFTIAIAAAVRK
Ga0302184_103301992	3300030490	Palsa	MASLGFAAVCVALAHLPFATLFLTERAKGATGLLLGAGLFTIAIAAA
Ga0310038_101720691	3300030707	Peatlands Soil	MRKGALSLGFAAVCVALGRFLFAPLFLAERASGATGLLLAAGLFTIAIAAVVRK
Ga0265770_10933411	3300030878	Soil	CGEKGLSMCKLAISLGFAAIFVALGRFLFAPAFLAERSDGATRILLAAGLFTIAIAAVVR
Ga0302308_101478933	3300031027	Palsa	AVCVALAHLPFATLFLTERAKGATGLLLGAGLFTIAIAAAVRK
Ga0170824_1142867291	3300031231	Forest Soil	MRKVIISFGFTTIFAALGRSLFAPTFLVERADGATRILLAAGLFTIAIAAIVRK
Ga0302325_103272013	3300031234	Palsa	VRKLMASLGFAAVCVALARLPFATLFLTERAKGATGLLLAAGLFTIAIAAVVRK
Ga0170820_112306712	3300031446	Forest Soil	FMRKLAIFLGPAAICIAFWRLLLAPFFLSERPRGATGLLLAAGLFTIAIAAVVRK
Ga0302326_119143482	3300031525	Palsa	MASLGFAAVCVALARLPFATLFLTERAKGATGLLLAAGLFTIAIAAVVRK
Ga0310686_1021945771	3300031708	Soil	MGKVAISLGFAAIFAALGRFLFAPAFLAERADGATRILLAAGLFTVAIAAVVR
Ga0310686_1034116883	3300031708	Soil	MRKVALSLGFAAIFVALGRSLFAPAFLAERADGATRTLLAAGLFTIAIAAVVRK
Ga0310686_1038833402	3300031708	Soil	MASLGFAAVCVAQARLPFATLFLTERSKGATGLLLAAGLFTIAIAAVVRK
Ga0310686_1137130873	3300031708	Soil	MRKLILSLGFAAVCVALARLMLASLFIAGRADGATGLLLGAGLFTIAIAAVVRK
Ga0310686_1170527591	3300031708	Soil	MRKVVISLGFAAIFVALGRSLFAPLFLAGHADRATGILFAVGLFTVA
Ga0307474_110961462	3300031718	Hardwood Forest Soil	MRKVAISLGFAATFVALGRFLFAPAFLAERADGATRILLAAGLFTIAIAALVRK
Ga0306918_105927083	3300031744	Soil	MRKLGISLGFAAVCVAFGRFLFAPLFLADRADGATGLLLAAGLFTIAIAAVVRK
Ga0307478_103907171	3300031823	Hardwood Forest Soil	MGKVALSLGFAAASIAFGRFLLPTLVLAERADSASGLLLAAGLFTIAIAAVVRK
Ga0318520_107161101	3300031897	Soil	MRKLMASLGFTVVCVALARLALATPFLADRASDAIGLVLAAGLFTIAIAAAIRK
Ga0306923_115795031	3300031910	Soil	GVSMRKLGISLGFAAVCVASGRFLFAPLFLADRANGATGLLLAAGLFTIAIAAVVRK
Ga0306921_113042482	3300031912	Soil	MRKLVLSLGFAAVCVALARLSFAPLFLAERADGATGLLLAAGVFTIAIAAVHRN
Ga0306926_109535262	3300031954	Soil	MRKFGISLGFTAVCVASGRFLFAPLFLADRADGATGLLLATGLFTIAIAAVVRK
Ga0306926_117212482	3300031954	Soil	MRKVAISLGFAAVCAAFGRFLFAPLFLAERADGATGLLLAAGLFTIAIAAVVRK
Ga0318562_105269523	3300032008	Soil	MRKFGISLGFAAVCVASGRFLFAPLFLADRADGATGLLLATGLFTIAIAAVVRK
Ga0306924_108094143	3300032076	Soil	ACGDEGLSMRKFGISLGFAAVFVASGRFLFALLFLADRADRATGLLLAAGLFTIAIAAVVRK
Ga0306920_1008834461	3300032261	Soil	MRKFGISLGFTAVCVASGRFLFAPLFLADRADGATGLLLAAGLFTIAIAAVVRK
Ga0335085_100682526	3300032770	Soil	MRKLAIFLGFAAVCVAFGRFLFAPLFLAERADGATGLLLAAGLFTIAIAAVVRK
Ga0335079_104666933	3300032783	Soil	KLMVSLGFAAIFVALARLSFAPLFLAEPANGATGLLLGAGLFTIAIAAAVRK
Ga0335078_107991192	3300032805	Soil	MRKLMVSLGFAAIFVALARLMFAPLFLAEPANGATGLLLGAGLFTIAIAAAVRK
Ga0335081_101706292	3300032892	Soil	MRKLMVSLGFAAIFVALARLSFAPLFLAEPANGATGLLLGAGLFTIAIAAAVRK
Ga0335075_100531964	3300032896	Soil	MRKVVLFLGIAAVCGAFPLARFFFGERASGATGFLFAAGLFTIAIAAVVRK
Ga0335075_100751764	3300032896	Soil	MRKIALAFGFAAVCLAFGRFLFDLPFLGGRANGATGLLLTAGLFTIAIAAVVRK
Ga0335072_106657432	3300032898	Soil	MRKIALSFGFAAVCLAFGRFLFDLPFVGGRANGATGLLLTAGLFTIAIAAVVRK
Ga0335073_100212386	3300033134	Soil	MRKLAISLGFAAVCVAFGRFLFAPLFSAERAGGATGLLLAAGLFTIAIAAVVRR
Ga0335073_101365184	3300033134	Soil	MRKVALFLGAAAVCGAFPLASLFLGERAGGATGLLLAAGLFTIAIAAAVGR
Ga0335073_110930463	3300033134	Soil	MRKFMASLGFAAICVALARLASTPPFIAERSDGTTLLLGAGLFTIAIAAVVRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050536

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences