Metagenome / Metatranscriptome Family F050533

Basic Information
Family ID	F050533
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	42 residues
Representative Sequence	MESLSELRERRAFECRLTPDRALGSLDEAEAFLRDRALLTRT
Number of Associated Samples	132
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.17 %
% of genes near scaffold ends (potentially truncated)	91.03 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	129
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Most Common Taxonomy
Group	Bacteria (70.345 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.897 % of family members)
Environment Ontology (ENVO)	Unclassified (25.517 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.690 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.29% β-sheet: 0.00% Coil/Unstructured: 65.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF03706	LPG_synthase_TM	18.62
PF05977	MFS_3	13.10
PF00994	MoCF_biosynth	7.59
PF12697	Abhydrolase_6	6.21
PF10509	GalKase_gal_bdg	2.07
PF10099	RskA	2.07
PF07883	Cupin_2	1.38
PF01928	CYTH	1.38
PF01087	GalP_UDP_transf	1.38
PF01408	GFO_IDH_MocA	1.38
PF13377	Peripla_BP_3	1.38
PF06724	DUF1206	1.38
PF13396	PLDc_N	1.38
PF00903	Glyoxalase	1.38
PF03551	PadR	1.38
PF10604	Polyketide_cyc2	0.69
PF02126	PTE	0.69
PF10502	Peptidase_S26	0.69
PF09851	SHOCT	0.69
PF13487	HD_5	0.69
PF00797	Acetyltransf_2	0.69
PF00296	Bac_luciferase	0.69
PF13671	AAA_33	0.69
PF00580	UvrD-helicase	0.69
PF00144	Beta-lactamase	0.69
PF01850	PIN	0.69
PF00589	Phage_integrase	0.69
PF04264	YceI	0.69
PF16363	GDP_Man_Dehyd	0.69
PF04542	Sigma70_r2	0.69
PF00383	dCMP_cyt_deam_1	0.69
PF00491	Arginase	0.69
PF05235	CHAD	0.69
PF01670	Glyco_hydro_12	0.69
PF02744	GalP_UDP_tr_C	0.69
PF08281	Sigma70_r4_2	0.69
PF13527	Acetyltransf_9	0.69
PF11066	DUF2867	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	18.62
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	13.10
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.38
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.38
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.38
COG1735	Predicted metal-dependent hydrolase, phosphotriesterase family	General function prediction only [R]	0.69
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.69
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.69
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.69
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.69
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.69
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.69
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.69
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.69
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.69
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.69
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.69
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.69
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.69
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.69
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.34 %
Unclassified	root	N/A	29.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.34 %
Unclassified	root	N/A	29.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.34 %
Unclassified	root	N/A	29.66 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.28 %
Unclassified	root	N/A	29.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	65.52 %
Unclassified	root	N/A	29.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	46.90 %
Unclassified	root	N/A	29.66 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.69 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.66 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	28.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.07 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.38 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.38 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.69 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.69 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.07 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.38 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.38 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.69 %
Dongia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Dongia	0.69 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.69 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.69 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.07 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.38 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.38 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.69 %
unclassified Dongia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Dongia → unclassified Dongia	0.69 %
Asanoa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa	0.69 %
Knoellia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia	0.69 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.07 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.38 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.38 %
Dongia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Dongia → unclassified Dongia → Dongia sp.	0.69 %
Nocardioides ginsengisegetis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ginsengisegetis	0.69 %
Asanoa ferruginea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa → Asanoa ferruginea	0.69 %
Knoellia sinensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia → Knoellia sinensis	0.69 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_100927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300000956\|JGI10216J12902_101285441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1331	Open in IMG/M
3300001305\|C688J14111_10124748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300001535\|A3PFW1_10317351	Not Available	524	Open in IMG/M
3300001686\|C688J18823_10234952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1224	Open in IMG/M
3300002245\|JGIcombinedJ26739_101414532	Not Available	589	Open in IMG/M
3300002568\|C688J35102_118128092	Not Available	532	Open in IMG/M
3300002568\|C688J35102_119401073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300002915\|JGI25387J43893_1040867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300004633\|Ga0066395_10920405	All Organisms → cellular organisms → Bacteria → Terrabacteria group	530	Open in IMG/M
3300005174\|Ga0066680_10238716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1153	Open in IMG/M
3300005332\|Ga0066388_105799851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300005363\|Ga0008090_15226018	Not Available	501	Open in IMG/M
3300005457\|Ga0070662_101640684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300005468\|Ga0070707_101128327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300005536\|Ga0070697_100337496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1300	Open in IMG/M
3300005542\|Ga0070732_10020014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3759	Open in IMG/M
3300005560\|Ga0066670_10067238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1914	Open in IMG/M
3300005764\|Ga0066903_102878203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	933	Open in IMG/M
3300005764\|Ga0066903_107352700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300005764\|Ga0066903_107507192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300006175\|Ga0070712_101251214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	646	Open in IMG/M
3300006847\|Ga0075431_100277751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1696	Open in IMG/M
3300006852\|Ga0075433_11453232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300006904\|Ga0075424_100187335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Dongia → unclassified Dongia → Dongia sp.	2196	Open in IMG/M
3300006904\|Ga0075424_101891227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300006914\|Ga0075436_100294806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa → Asanoa ferruginea	1161	Open in IMG/M
3300006954\|Ga0079219_10713115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300009094\|Ga0111539_11660951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300009143\|Ga0099792_10445219	Not Available	801	Open in IMG/M
3300009148\|Ga0105243_11482346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300009162\|Ga0075423_11037840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300010366\|Ga0126379_11369564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia → Knoellia sinensis	814	Open in IMG/M
3300010366\|Ga0126379_13151021	Not Available	552	Open in IMG/M
3300010376\|Ga0126381_100185563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2767	Open in IMG/M
3300010376\|Ga0126381_101661445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	923	Open in IMG/M
3300010379\|Ga0136449_102364034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300010876\|Ga0126361_10855599	Not Available	531	Open in IMG/M
3300011270\|Ga0137391_10744879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	811	Open in IMG/M
3300012199\|Ga0137383_10633931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300012200\|Ga0137382_10777503	Not Available	688	Open in IMG/M
3300012356\|Ga0137371_10896569	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300012509\|Ga0157334_1031502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300012899\|Ga0157299_10291294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300012915\|Ga0157302_10259057	Not Available	655	Open in IMG/M
3300012960\|Ga0164301_10711307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300012971\|Ga0126369_11674794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300012971\|Ga0126369_12007233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300014968\|Ga0157379_11122715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300015372\|Ga0132256_100768809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300015374\|Ga0132255_103387298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300016422\|Ga0182039_10786799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300016445\|Ga0182038_10985144	Not Available	746	Open in IMG/M
3300017695\|Ga0180121_10222443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300017823\|Ga0187818_10052865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ginsengisegetis	1746	Open in IMG/M
3300017924\|Ga0187820_1142554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300017939\|Ga0187775_10010587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2339	Open in IMG/M
3300017942\|Ga0187808_10007644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4148	Open in IMG/M
3300017974\|Ga0187777_10781305	All Organisms → cellular organisms → Bacteria → Terrabacteria group	681	Open in IMG/M
3300019890\|Ga0193728_1180848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300021363\|Ga0193699_10052666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1578	Open in IMG/M
3300021374\|Ga0213881_10137017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1069	Open in IMG/M
3300021403\|Ga0210397_10684370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300021407\|Ga0210383_10799019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300021433\|Ga0210391_10832585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300021445\|Ga0182009_10502634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300021475\|Ga0210392_10674713	Not Available	769	Open in IMG/M
3300021559\|Ga0210409_10384306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1258	Open in IMG/M
3300023071\|Ga0247752_1027258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300025556\|Ga0210120_1058136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300025900\|Ga0207710_10210508	Not Available	962	Open in IMG/M
3300025901\|Ga0207688_10388886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300025908\|Ga0207643_11070921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300025931\|Ga0207644_10399886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300025934\|Ga0207686_11405984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300026075\|Ga0207708_11436767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300026078\|Ga0207702_11101063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300026528\|Ga0209378_1246997	Not Available	567	Open in IMG/M
3300027567\|Ga0209115_1062266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300027824\|Ga0209040_10120066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1459	Open in IMG/M
3300027867\|Ga0209167_10416718	Not Available	733	Open in IMG/M
3300027908\|Ga0209006_11251235	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300028666\|Ga0265336_10064278	Not Available	1098	Open in IMG/M
3300028707\|Ga0307291_1145530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300028722\|Ga0307319_10222015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300028789\|Ga0302232_10085716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1624	Open in IMG/M
3300028811\|Ga0307292_10148102	Not Available	947	Open in IMG/M
3300031236\|Ga0302324_101483746	Not Available	882	Open in IMG/M
3300031247\|Ga0265340_10079993	Not Available	1539	Open in IMG/M
3300031543\|Ga0318516_10334912	All Organisms → cellular organisms → Bacteria → Terrabacteria group	874	Open in IMG/M
3300031544\|Ga0318534_10268978	Not Available	982	Open in IMG/M
3300031545\|Ga0318541_10721289	Not Available	557	Open in IMG/M
3300031573\|Ga0310915_10211649	Not Available	1358	Open in IMG/M
3300031668\|Ga0318542_10295675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	828	Open in IMG/M
3300031670\|Ga0307374_10042038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4953	Open in IMG/M
3300031681\|Ga0318572_10111605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1554	Open in IMG/M
3300031708\|Ga0310686_107553933	Not Available	560	Open in IMG/M
3300031713\|Ga0318496_10060853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1974	Open in IMG/M
3300031744\|Ga0306918_11331218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300031751\|Ga0318494_10232674	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1054	Open in IMG/M
3300031764\|Ga0318535_10196363	Not Available	902	Open in IMG/M
3300031768\|Ga0318509_10132780	Not Available	1365	Open in IMG/M
3300031768\|Ga0318509_10333671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300031769\|Ga0318526_10480874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300031777\|Ga0318543_10379534	Not Available	633	Open in IMG/M
3300031778\|Ga0318498_10057353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1735	Open in IMG/M
3300031793\|Ga0318548_10122761	Not Available	1256	Open in IMG/M
3300031797\|Ga0318550_10639398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300031805\|Ga0318497_10256005	Not Available	971	Open in IMG/M
3300031819\|Ga0318568_10201561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1227	Open in IMG/M
3300031819\|Ga0318568_10936549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300031820\|Ga0307473_10879709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300031846\|Ga0318512_10632477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300031858\|Ga0310892_10353108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300031896\|Ga0318551_10942962	Not Available	504	Open in IMG/M
3300031959\|Ga0318530_10180585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	863	Open in IMG/M
3300032008\|Ga0318562_10541181	Not Available	674	Open in IMG/M
3300032008\|Ga0318562_10651937	Not Available	607	Open in IMG/M
3300032013\|Ga0310906_10227535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1149	Open in IMG/M
3300032044\|Ga0318558_10685429	Not Available	512	Open in IMG/M
3300032054\|Ga0318570_10504442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300032063\|Ga0318504_10015738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2755	Open in IMG/M
3300032067\|Ga0318524_10597405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300032089\|Ga0318525_10275636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300032089\|Ga0318525_10323321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300032090\|Ga0318518_10561095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300032160\|Ga0311301_10013180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25428	Open in IMG/M
3300032179\|Ga0310889_10334697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300032896\|Ga0335075_11240431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300033134\|Ga0335073_10313750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1875	Open in IMG/M
3300033290\|Ga0318519_10463307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300033412\|Ga0310810_10729198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300034817\|Ga0373948_0103215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.45%
Host-Associated	Host-Associated	16.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.31%
Plants	Host-Associated → Plants	16.55%
Aquatic	Environmental → Aquatic	4.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.79%
Freshwater	Environmental → Aquatic → Freshwater	3.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.76%
Peat	Environmental → Terrestrial → Peat	1.38%
Marine	Environmental → Aquatic → Marine	0.69%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.76%
Loam	Environmental → Terrestrial → Soil → Loam	11.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.38%
Ice	Environmental → Aquatic → Freshwater → Ice	0.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.69%
Clay	Environmental → Terrestrial → Soil → Clay	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.69%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.69%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.07%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.38%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.69%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050533

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01547790	2199352025	Soil	MEPVEPLAEQLRRRACECRLTPARALETLAEAEAFLRDRGLL
JGI10216J12902_1012854413	3300000956	Soil	LGELQELQERRSFECRLTPDRALQTLDEAEAFLRDRGLLTRT
C688J14111_101247482	3300001305	Soil	MTHMGLAELQRRRAVDCRLTPERALQSIDEAEAFLLDRGLLT
A3PFW1_103173512	3300001535	Permafrost	MHSLRELEEQRRFACRLSPDRALQSLDDAHAFLRERGMLTRTEDSAL
C688J18823_102349522	3300001686	Soil	MTHVGLAELQRRRAVDCRLTPERALQSIDEAEAFLLDRGL
JGIcombinedJ26739_1014145322	3300002245	Forest Soil	MESLSELRERRAFECRLTADRALGSLDEAEAFLRERALLTRT
C688J35102_1181280921	3300002568	Soil	VETLDELRVRRAFECRLTPHRALQSLDEAEAFLLDRGLLTRTADSA
C688J35102_1194010731	3300002568	Soil	MTRMGLAELQQRRAFECRLTPDRALGSLDEAEAFLLDRGLLTR
JGI25387J43893_10408672	3300002915	Grasslands Soil	MSRLQELQERRAYECRLTPDRALRSLDEAEAFLRDRGLLTRTADSA
Ga0066395_109204052	3300004633	Tropical Forest Soil	VESLTDLQVQRVFECRLTADRALGTLDEAEAFLRGRGLLT
Ga0062591_1014516602	3300004643	Soil	VESLDDLRERRAHECRLTPDRALQSLDEADAFLRDRGLLT
Ga0066680_102387161	3300005174	Soil	MATLPELQERRAAECRLTPDRALTSPDDTEAFLRDRGLLTRTADSAL
Ga0070658_104044761	3300005327	Corn Rhizosphere	MESLAALRERRAFACRLTPDRALESLDEAEGFLRERGMLTRT
Ga0066388_1057998511	3300005332	Tropical Forest Soil	MESLAGLRERRAFECRLTPDRALRSIDEATAFLRERGMLTRT
Ga0008090_152260182	3300005363	Tropical Rainforest Soil	VESLADLRARRAFECRLDPGLALRSLDEAEAFLRDRGLLTRTTDCAL
Ga0070662_1016406841	3300005457	Corn Rhizosphere	MKPVTRVDELRERRALECRLTPDRALESLDEAEAFLLDRGLLTRTADS
Ga0070707_1011283272	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VESLAELREWRAFQCRLTPDRALRSLEEAEGYLRDRGMLTRTAD
Ga0070697_1003374963	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VESLTELRERRAFQCRLTPDRALRSLEEADAFLRDRGLLTR
Ga0070732_100200145	3300005542	Surface Soil	VESLAAAREERAFLCRLTPDRALGSLDQADAFLRDRGMLTRTPDSALPSL
Ga0066670_100672384	3300005560	Soil	VGTAQSDTALAELQEKRAFALRLTQDRALQTLDDAEAFLHERGMMTRT
Ga0066903_1028782031	3300005764	Tropical Forest Soil	VESLAELRARRAFECRLIPVRALGSLDEAAAFLRDRGLLTR
Ga0066903_1073527001	3300005764	Tropical Forest Soil	VDSLEGLRERRDFECRLTPDRALRTLDEAEAFLRDR
Ga0066903_1075071922	3300005764	Tropical Forest Soil	MSSPLNELRERRAHECRLTPDRALTSLDEAEAFLLDRGLLTRTADS
Ga0070712_1012512143	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VESLADLRVRRAIECRLDPGRALRSLDEAEAFLRDRGLL
Ga0075431_1002777511	3300006847	Populus Rhizosphere	MTGNPTLDDLRKLRAFECRLTPDRALGSLDEAEEFLLDRGLLTRTADC
Ga0075433_114532321	3300006852	Populus Rhizosphere	MTGNPTLDQLRTLRAFECRLTPDRALGSLDEAEEFLLDRGLLTRTADC
Ga0075424_1001873353	3300006904	Populus Rhizosphere	VESLTGLRERRAFQCRLAPGRALRSLEEADAFLRDRGLLTRTADC
Ga0075424_1018912271	3300006904	Populus Rhizosphere	MTGNPTLDELRTLRAFECRLTPDRALGSLDEAEEFLLDRGLL
Ga0075436_1002948062	3300006914	Populus Rhizosphere	VESLTELRERRAFQCRLAPGRALRSLEEADAFLRDRGLLTRTAD
Ga0079219_107131151	3300006954	Agricultural Soil	MPSVTELGQLTARRAFECRLTPDRLLGSLEEAEAFLRDRG
Ga0111539_116609512	3300009094	Populus Rhizosphere	MTGNPTLDQLRTLRAFECRLTPDRALGSLDEAEEFLLDRGLLTRT
Ga0099792_104452191	3300009143	Vadose Zone Soil	VESLAGLQTRRAFECRLVPDRALRSLDEAAAFLRDRGLLTRTT
Ga0105243_114823461	3300009148	Miscanthus Rhizosphere	MIQMSLPELQRRRAFECRLTPDRALGSLDEAEAFLLDR
Ga0075423_110378402	3300009162	Populus Rhizosphere	VESLAELRVRRRYQCRLGPDRALRSLEEADAFLRDRGLLTRTADCAL
Ga0126380_115939101	3300010043	Tropical Forest Soil	MLAALLEQRAFECRLTSDRALGTLVDAESFLRDRGLLTRTP
Ga0126373_113282162	3300010048	Tropical Forest Soil	VEVVDPVADLLRRREFECRLTPDRALGSLQEAESFLRDRQLLTRT
Ga0126379_113695643	3300010366	Tropical Forest Soil	VESLAELRVRRRFQCRLAPDRALRSLEEADAFLRDRGLLT
Ga0126379_131510212	3300010366	Tropical Forest Soil	VESLADLRARRAFECRLYSGRALRSLGEAEAFLRDRGLLT
Ga0126379_133579282	3300010366	Tropical Forest Soil	VESLAALRERRAYECRLIPGRALGSLDEAEGFLRDR
Ga0126381_1001855631	3300010376	Tropical Forest Soil	VESLAELRVRRRFQCRLAPDRALRSLEEADAFLCDRGLLT
Ga0126381_1016614452	3300010376	Tropical Forest Soil	VETLAELRERRAFECRLTADRALASLAEADAFLRDRGLLT
Ga0136449_1023640341	3300010379	Peatlands Soil	VESLAAAREERAFWCRLTPDRALGSLDEAEMFLRDRGMLTRTADSALPS
Ga0126361_108555991	3300010876	Boreal Forest Soil	VESLAELRARRAYECRLVPGRALRSLDEADGFLRGRGLLTRTTDCALP
Ga0137391_107448791	3300011270	Vadose Zone Soil	VESLTALRERRGFECRLAPDRALRTIDDAEGFLHDRGLLTRT
Ga0137383_106339311	3300012199	Vadose Zone Soil	MTHMGLAELQRRRAVDCRLTPERALQSIEEAEAFLLDRGLLTR
Ga0137382_107775031	3300012200	Vadose Zone Soil	VSLEELRERRAFECRLTPDRALGSLEEAEAFLLDRGL
Ga0137371_108965693	3300012356	Vadose Zone Soil	LQAKRVFACRLEPARALATLDEAEAFLRDRGLLTRT
Ga0157334_10315021	3300012509	Soil	MPSVTELGQLTARRAFECRLTPDRALGSLEEAEAFLRDRGLLTRT
Ga0157299_102912941	3300012899	Soil	MTRMSLAELQQRRAFECRLTPDRALGSLDEAETFLL
Ga0157302_102590571	3300012915	Soil	MTHVRTAEDLQERRTFECRLTAERALESLDEAEEFLLDRGLLTRTADSA
Ga0164301_107113072	3300012960	Soil	MTRMRLAELQQRRAVECRLTPDRALGSLDEAEAFLL
Ga0126369_116747941	3300012971	Tropical Forest Soil	VESLAELRVRRAFECRLIPVRALGSLDEAAAFLRDR
Ga0126369_120072331	3300012971	Tropical Forest Soil	VQPLAELRERRDFECRLVPVRALRSLDEADAFLRGRGLL
Ga0157379_111227152	3300014968	Switchgrass Rhizosphere	MIQMSLPELQRRRAFECRLTPDRALGSLDEAEAFLLDRGLLTRTADSAL
Ga0132256_1007688092	3300015372	Arabidopsis Rhizosphere	MDQLRRRRAFECRLTPDRALGSLDEAEAFLRDRGLLTRTADCALP
Ga0132255_1033872981	3300015374	Arabidopsis Rhizosphere	VETLDELRERRAFECRLTPDRALPSLDEAEEFLLDRGLLT
Ga0182039_107867992	3300016422	Soil	VESLAELRERRAFECRLSPDRALESLDEAEAFLGDRGFLTRTPDSALPS
Ga0182038_109851442	3300016445	Soil	MESLAELRVRRAFECRLVPDRALRSLDEADRFLRCRGLLTRTTDC
Ga0180121_102224431	3300017695	Polar Desert Sand	VASLTELQERHAFECRLTPERALGSLDEAEAFLLDR
Ga0187818_100528655	3300017823	Freshwater Sediment	VESLAELRERRDLRCRLTPDRALRSLDEADAFLRDRGMLTRTADCAIP
Ga0187820_11425541	3300017924	Freshwater Sediment	VESLTEARERRAFCCRLTPDRTLRSLAEAEVFLRDRGLLTRTADCAL
Ga0187775_100105874	3300017939	Tropical Peatland	VSLEELRERRAFECRLAPNRALVSLDEAEAFLIDRGLL
Ga0187808_100076445	3300017942	Freshwater Sediment	VESLTEARERRAFCCRLTPDRTLRSLAEAEVFLRDRGL
Ga0187777_107813051	3300017974	Tropical Peatland	VESLTDLRAQRAFECRLAPDRALRTIDEAEAFLRDRGL
Ga0193728_11808481	3300019890	Soil	MSAHGPSMEELRERRAFECRLTPDRALQTLDEAEVFLRDRGLLT
Ga0193699_100526663	3300021363	Soil	MTRMRLAELQQRRALECRLTPDRALGSVDEAEAFLL
Ga0213881_101370171	3300021374	Exposed Rock	VEALTALQEQRAMRCRLTTGRALRSLDEAEAFLLDR
Ga0210397_106843701	3300021403	Soil	VETLADLRVRRAIECRLAPGRELRSLTEAREFLDE
Ga0210383_107990191	3300021407	Soil	VDSLTGLREQRAFECRLTPDRALRTLAEAEEFLRGRGLLTRTTDCALPS
Ga0210391_108325852	3300021433	Soil	MESLSELRERRAVECRLTPDRALCSLDEAEAFLRERALL
Ga0182009_105026341	3300021445	Soil	MTRVRTAQDLQQRRTYECRLTADRALESLDEAEEFLLD
Ga0210392_106747132	3300021475	Soil	MESLAALRERRSFECRLSPGRALASLDEAEAFLRGRGLL
Ga0210409_103843062	3300021559	Soil	MESLAGLRERRVFECRLTPDRALGSLDEAEGFLRERGMLTR
Ga0126371_103180214	3300021560	Tropical Forest Soil	VEPVADLLRRREFECRLSPDRALGSLQEAESFLRDRRLLTRTAD
Ga0247752_10272582	3300023071	Soil	MTGNPTLDELRTLRAFECRLTPDRALGSPDEAEEFLLD
Ga0210120_10581361	3300025556	Natural And Restored Wetlands	MTRMRLAELQRQRAVECRLTPDRALGSLDEAEAFLLDRGL
Ga0207710_102105082	3300025900	Switchgrass Rhizosphere	MSLSDLQRRRDHECRLTPDRALGSLDEAESFLLDRGLLTR
Ga0207688_103888861	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MIQMSLPELQRRRAFECRLTPDRALGSLDEAEAFLLDRGLLD
Ga0207643_110709212	3300025908	Miscanthus Rhizosphere	MPSVTELGQLTARRAFECRLTPDRALGSLEEAEAFLRDRGLL
Ga0207705_100709593	3300025909	Corn Rhizosphere	MESLAALRERRAFACRLTPDRALESLDEAEGFLRERGML
Ga0207644_103998862	3300025931	Switchgrass Rhizosphere	MATLDELRERRAFECRLTPDRALGSLDEAETFLLDRGLLT
Ga0207686_114059842	3300025934	Miscanthus Rhizosphere	MSLPELQRRRAFECRLTPDRALGSLDEAEAFLLDRGLLTRTAD
Ga0207708_114367671	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSLPELQRRRAFECRLTHDRALGSLDEAEAFLLDRG
Ga0207702_111010631	3300026078	Corn Rhizosphere	MAPVSSAEELRERRAFECRLTPDRALESLDEAEEFLLDRGLLTRTA
Ga0209378_12469971	3300026528	Soil	MHQLGRRRKRECRLEADRALRTLDEAEAFLRDRGLLTLMPDCAL
Ga0209648_106602041	3300026551	Grasslands Soil	VESLAQLRERREFECRLTPDRALESLQEAEAFLRD
Ga0209115_10622661	3300027567	Forest Soil	MESLSELRERRAFECRLTPDRALGSLDEAEAFLRERALLTRTPDCAV
Ga0209040_101200663	3300027824	Bog Forest Soil	MESATQLRERRAFECRLTPDRALRSLDEAGAFLRDRGMLTR
Ga0209167_104167183	3300027867	Surface Soil	MESVAGLRERRAFECRLTQDRALGSLDEAEAFLGERGMLTRTADS
Ga0209590_105333721	3300027882	Vadose Zone Soil	MATLPELQERRAAECRLTPDRALTSPDDTEAFLRDRGLLTRT
Ga0209006_112512352	3300027908	Forest Soil	VESLAELRERRAWECRLTPDRALVSIADADGFLQDRGLLTRTA
Ga0268266_108935951	3300028379	Switchgrass Rhizosphere	MESLAALRERRAFACRLTPDRALESLDEAEGFLRERGMLTR
Ga0265336_100642781	3300028666	Rhizosphere	MESLAGLRERRAFECRLTPDRALGSLDEAEGFLGLRGLLTRTADSAL
Ga0307291_11455302	3300028707	Soil	MSLVELQQRRAHECRLTPDRALGSLDDAESFLLDRGL
Ga0307319_102220152	3300028722	Soil	VETLGELRERRAYECRLTFDRALDSLDEAEAFLRDRGLLTRTPDSAL
Ga0302232_100857163	3300028789	Palsa	MESLSELRERRAFECRLTPDRALGSLDEAEAFLRDRALLTRT
Ga0307292_101481021	3300028811	Soil	VETLDELRERRAFECRLTPDRALQSLDEAEAFLLD
Ga0302324_1014837463	3300031236	Palsa	MESLAELLERRAFRCRLVPERALRSVEEAEGFLRDRGLLTRTPDS
Ga0265340_100799932	3300031247	Rhizosphere	MESLAGLRERRAFECRLTPDRALGSLDEAEGFLGLRGLLTRT
Ga0318516_103349121	3300031543	Soil	VESLAELRARRAFECRLVPARALRSLDEAAAFLRDRGLLTRTTDCALPS
Ga0318534_102689781	3300031544	Soil	VESLTDLQVQRVFDCRLTPDRALGTLDEAEAFLRGR
Ga0318541_107212891	3300031545	Soil	VESLTDLQVQRVFDCRLTPDRALGTLDEAEAFLQGR
Ga0310915_102116491	3300031573	Soil	MESLAELRVRRAFECRLVPDRALRSLDEADRFLRSRGLL
Ga0318542_102956752	3300031668	Soil	MEPFAGLRERRAFECRLTPDRALRSLDEATAFLRERGMLTRTTDCALPSLY
Ga0307374_100420385	3300031670	Soil	VAWLADLSAQRAFECRLTPDRALSSLDEADDFLLARGLLTRT
Ga0318572_101116051	3300031681	Soil	VESLTDLQVQRVFDCRLTPDRALGTLDEAEAFLRGRGLLTR
Ga0310686_1075539331	3300031708	Soil	MESLDGLSERRAFECRLRPDRALGSLDEAEVFLRERGM
Ga0318496_100608533	3300031713	Soil	MESLAELRVRRAFECRLVPDRALRSLDEADRFLRCRGLLTRTTDCA
Ga0306918_113312181	3300031744	Soil	MEPLAGLRERRAFECRLTPDRALRSLDEATAFARERGMLTR
Ga0318494_102326742	3300031751	Soil	VESLADLRARRAFECRLDPGRALRSLDEAEGFLRDRGLLTRTTDC
Ga0318535_101963632	3300031764	Soil	VESLADLRARRAFECRLDPGRALRSLDEAEAFLRDRGLLTRTTD
Ga0318509_101327801	3300031768	Soil	VESLAELRARRAFECRLVPARALRSLDEAAGFLRDRGLLTRTTDCALPS
Ga0318509_102954302	3300031768	Soil	MESLAELRERRAFECRLTPDRALASLDEAGEFLRDRGM
Ga0318509_103336711	3300031768	Soil	MEPLAGLRERRAFECRLTPDRALRSLDEATAFARERGMLTRTTDC
Ga0318526_104808741	3300031769	Soil	MESLAGLRERRAFECRLTPDRALRSLDEATAFARERGMLTRTTD
Ga0318543_103795341	3300031777	Soil	VESLAELRARRAFECRLVPARALRSLDEAAAFLRDRGLLTRTAD
Ga0318498_100573531	3300031778	Soil	VESLTDLQVQRVFDCRLTPDRALGTLDEAEAFLRGRGLLTRTAD
Ga0318548_101227612	3300031793	Soil	VESLADLRARRAFECRLDPGRALRSLDEAEAFLRDRGLLT
Ga0318550_106393981	3300031797	Soil	VESLTDLQVQRVFDCRLTPDRALGTLDEAEAFLRGRGLLTRTADC
Ga0318497_102560052	3300031805	Soil	MESLAELRVRRAFECRLVPDRALRSLDEADRFLRCRGLLTR
Ga0318568_102015612	3300031819	Soil	VESLAELRERRAFECRLSPDLALESLDEAQAFLDDRGFLTRTPD
Ga0318568_109365491	3300031819	Soil	MESATELRERRAFECRLTPDRALGSLDEADAFLRDRGMLTRTPDSALPS
Ga0307473_108797092	3300031820	Hardwood Forest Soil	VESLTELRERRAFQCRLTPDRALRSLEEADAFLRDRGLLTRTADCAL
Ga0318512_106324771	3300031846	Soil	MESATELRERRAFECRLTPDRALRSLDEADAFLRDRGMLT
Ga0310892_103531081	3300031858	Soil	MPLVTELGQLTARRAFECRLTPDRALGSLEEAEAFLRDRGLLTR
Ga0318551_109429622	3300031896	Soil	MESLAELRVRRAFECRLVPDRALRSLDEADRFLRCRG
Ga0318530_101805852	3300031959	Soil	MEPLAGLRERRAFECRLTPDRALRSLDEATAFARERGM
Ga0318562_105411811	3300032008	Soil	VESLAELRARRAFECRLVPARALRSLDEAAAFLRDRGLLTRTTDCA
Ga0318562_106519371	3300032008	Soil	VESLAELRARRAFECRLVPARALRSLDEAAGFLRDRGLLT
Ga0310906_102275352	3300032013	Soil	MTGNPTLDELRTLRAFECRLTPDRALGSLDEAEEFLLDR
Ga0318558_106854292	3300032044	Soil	MESLGELRERRAFECRLTQDRALESLDDADAFAAERGLLTRTADSA
Ga0318570_105044422	3300032054	Soil	MESATELRERRAFECRLTPDRALRSLDEADAFLRDRG
Ga0318504_100157384	3300032063	Soil	VESLADLRARRAFECRLDPGRALRSLDEAEGFLRD
Ga0318524_105974051	3300032067	Soil	MESATELQERRAFECRLTPDRALRSLDEADAFLRDRGMLTR
Ga0318525_102756362	3300032089	Soil	MESLARLRERRAFECRLTPDRALRSFDEATAFLRE
Ga0318525_103233211	3300032089	Soil	MMEPVEPLAEQLRRRAFECRLTPDRALETLSEAEAFLRDRG
Ga0318518_105610952	3300032090	Soil	MESLAGLRERRAFECRLTPDRALRSLDEATAFARERGMLTRTTDCAL
Ga0311301_1001318026	3300032160	Peatlands Soil	VESLAAAREERAFWCRLTPDRALGSLDEAEMFLRDRGMLTRTADSALPSL
Ga0310889_103346971	3300032179	Soil	MTGNPTLDELRTLRAFECRLTPDRALGSLDEAEEFLLDRGLLTR
Ga0335075_112404311	3300032896	Soil	MMVPIETLAQLRERRAAECRLTPDRALGSLDEAAAFLRQRGLLTRTP
Ga0335073_103137501	3300033134	Soil	MVVMESLAQLRERRAAECRLTPDLALGSLDEAAAFLRE
Ga0310914_118076092	3300033289	Soil	VESLAELTERRAIECRLSPDRALESLDEAESFLGER
Ga0318519_104633072	3300033290	Soil	MEPFAGLRERRAFECRLTPDRALRSLDEATAFLRERGMLTRTTDCALPS
Ga0310810_107291981	3300033412	Soil	MTRVRTAEDLQERRTFECRLTAERALESLDEAEEFLLDRGLLTRTA
Ga0373948_0103215_1_138	3300034817	Rhizosphere Soil	MAGRPTMTGNPTLDELRTLRAFECRLTPDRALGSLDEAEEFLLDRG

Hidden Markov Model


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