Metagenome / Metatranscriptome Family F050523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050523
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	47 residues
Representative Sequence	MAASSGFMIAEAERRFPVRVRIGVPPDGLGPRLDRIKAWLDENAGA
Number of Associated Samples	113
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.66 %
% of genes near scaffold ends (potentially truncated)	90.34 %
% of genes from short scaffolds (< 2000 bps)	91.72 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.931 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.759 % of family members)
Environment Ontology (ENVO)	Unclassified (42.069 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.448 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.78% β-sheet: 0.00% Coil/Unstructured: 66.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF02586	SRAP	4.83
PF07369	DUF1488	4.14
PF01522	Polysacc_deac_1	3.45
PF00563	EAL	2.07
PF00929	RNase_T	1.38
PF13561	adh_short_C2	1.38
PF01315	Ald_Xan_dh_C	1.38
PF00378	ECH_1	1.38
PF00561	Abhydrolase_1	0.69
PF13817	DDE_Tnp_IS66_C	0.69
PF06463	Mob_synth_C	0.69
PF01464	SLT	0.69
PF00462	Glutaredoxin	0.69
PF13751	DDE_Tnp_1_6	0.69
PF04828	GFA	0.69
PF13560	HTH_31	0.69
PF01757	Acyl_transf_3	0.69
PF01381	HTH_3	0.69
PF00313	CSD	0.69
PF04266	ASCH	0.69
PF01230	HIT	0.69
PF06032	DUF917	0.69
PF02397	Bac_transf	0.69
PF00571	CBS	0.69
PF02423	OCD_Mu_crystall	0.69
PF13091	PLDc_2	0.69
PF01925	TauE	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	4.83
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	3.45
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	2.07
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	2.07
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	2.07
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	2.07
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.69
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.69
COG2411	Predicted RNA-binding protein, contains PUA-like ASCH domain	General function prediction only [R]	0.69
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.69
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	0.69
COG3097	Uncharacterized conserved protein YqfB, UPF0267 family	Function unknown [S]	0.69
COG3535	Uncharacterized conserved protein, DUF917 family	Function unknown [S]	0.69
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.69
COG4405	Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain	General function prediction only [R]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.93 %
Unclassified	root	N/A	42.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.93 %
Unclassified	root	N/A	42.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.93 %
Unclassified	root	N/A	42.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.38 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.79 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	2.07 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.38 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.69 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.79 %
Rhizobiales bacterium 39-66-18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	2.07 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.38 %
Anderseniella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Anderseniella	0.69 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.69 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.79 %
Rhizobiales bacterium 39-66-18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	2.07 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.38 %
Paraburkholderia tropica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tropica	0.69 %
unclassified Anderseniella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Anderseniella → unclassified Anderseniella	0.69 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.79 %
Rhizobiales bacterium 39-66-18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	2.07 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.38 %
Anderseniella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Anderseniella → unclassified Anderseniella → Anderseniella sp.	0.69 %
Paraburkholderia tropica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tropica	0.69 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_100902279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300004092\|Ga0062389_103643352	Not Available	578	Open in IMG/M
3300004156\|Ga0062589_102860854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	504	Open in IMG/M
3300004157\|Ga0062590_102415650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	555	Open in IMG/M
3300004635\|Ga0062388_101044570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300004635\|Ga0062388_102169094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300005178\|Ga0066688_10774016	Not Available	603	Open in IMG/M
3300005458\|Ga0070681_10550861	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067	Open in IMG/M
3300005541\|Ga0070733_11074063	Not Available	540	Open in IMG/M
3300005614\|Ga0068856_102348055	Not Available	541	Open in IMG/M
3300005898\|Ga0075276_10025836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300006175\|Ga0070712_101789920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300006791\|Ga0066653_10073413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1488	Open in IMG/M
3300006804\|Ga0079221_11594115	Not Available	528	Open in IMG/M
3300006880\|Ga0075429_101717250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300009088\|Ga0099830_10725471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300009088\|Ga0099830_10988300	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300009143\|Ga0099792_10403099	Not Available	837	Open in IMG/M
3300009143\|Ga0099792_11130940	Not Available	529	Open in IMG/M
3300009177\|Ga0105248_10664005	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300009553\|Ga0105249_12665141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	572	Open in IMG/M
3300010048\|Ga0126373_12084633	Not Available	629	Open in IMG/M
3300010343\|Ga0074044_10018817	All Organisms → cellular organisms → Bacteria	5036	Open in IMG/M
3300010376\|Ga0126381_102889256	Not Available	684	Open in IMG/M
3300010376\|Ga0126381_103332200	Not Available	633	Open in IMG/M
3300010398\|Ga0126383_13112530	Not Available	542	Open in IMG/M
3300011270\|Ga0137391_10708015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300011270\|Ga0137391_11456206	Not Available	530	Open in IMG/M
3300011271\|Ga0137393_10861592	Not Available	773	Open in IMG/M
3300011271\|Ga0137393_11554260	Not Available	551	Open in IMG/M
3300011427\|Ga0137448_1187041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300012019\|Ga0120139_1043009	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300012199\|Ga0137383_10315772	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300012202\|Ga0137363_10451874	Not Available	1075	Open in IMG/M
3300012202\|Ga0137363_10959383	Not Available	726	Open in IMG/M
3300012205\|Ga0137362_11313462	Not Available	609	Open in IMG/M
3300012206\|Ga0137380_10194835	All Organisms → cellular organisms → Bacteria → Proteobacteria	1839	Open in IMG/M
3300012209\|Ga0137379_11404661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300012211\|Ga0137377_11445042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300012285\|Ga0137370_10709013	Not Available	625	Open in IMG/M
3300012361\|Ga0137360_11586056	Not Available	559	Open in IMG/M
3300012362\|Ga0137361_10575140	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300012363\|Ga0137390_11036494	Not Available	771	Open in IMG/M
3300012917\|Ga0137395_10801358	Not Available	682	Open in IMG/M
3300012917\|Ga0137395_11216645	Not Available	526	Open in IMG/M
3300012924\|Ga0137413_11461408	Not Available	554	Open in IMG/M
3300012925\|Ga0137419_11956672	Not Available	504	Open in IMG/M
3300012927\|Ga0137416_11613151	Not Available	591	Open in IMG/M
3300012944\|Ga0137410_11025396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300012944\|Ga0137410_11706301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	554	Open in IMG/M
3300012989\|Ga0164305_11727823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	563	Open in IMG/M
3300013306\|Ga0163162_12634782	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300015200\|Ga0173480_10791872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	604	Open in IMG/M
3300015241\|Ga0137418_10219227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1633	Open in IMG/M
3300015264\|Ga0137403_10462079	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300016270\|Ga0182036_11870996	Not Available	509	Open in IMG/M
3300016294\|Ga0182041_10195869	All Organisms → cellular organisms → Bacteria → Proteobacteria	1605	Open in IMG/M
3300016319\|Ga0182033_10094762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	2180	Open in IMG/M
3300016319\|Ga0182033_10629812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300016319\|Ga0182033_10745775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300016319\|Ga0182033_11245900	Not Available	667	Open in IMG/M
3300016341\|Ga0182035_11877155	Not Available	543	Open in IMG/M
3300016357\|Ga0182032_10992688	Not Available	717	Open in IMG/M
3300016387\|Ga0182040_10055746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2485	Open in IMG/M
3300016387\|Ga0182040_10144934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1684	Open in IMG/M
3300016387\|Ga0182040_11488209	Not Available	575	Open in IMG/M
3300016387\|Ga0182040_11608789	Not Available	553	Open in IMG/M
3300016387\|Ga0182040_11967019	Not Available	502	Open in IMG/M
3300016404\|Ga0182037_11267589	Not Available	649	Open in IMG/M
3300016404\|Ga0182037_11989754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300016445\|Ga0182038_10109731	All Organisms → cellular organisms → Bacteria → Proteobacteria	2025	Open in IMG/M
3300017822\|Ga0187802_10173393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300017961\|Ga0187778_11091160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	556	Open in IMG/M
3300017972\|Ga0187781_11167110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300018086\|Ga0187769_11315196	Not Available	547	Open in IMG/M
3300019263\|Ga0184647_1450832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300021168\|Ga0210406_10322332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1252	Open in IMG/M
3300021170\|Ga0210400_10062531	All Organisms → cellular organisms → Bacteria	2904	Open in IMG/M
3300021406\|Ga0210386_10775705	Not Available	824	Open in IMG/M
3300021439\|Ga0213879_10288940	Not Available	502	Open in IMG/M
3300021560\|Ga0126371_12855995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300025903\|Ga0207680_10779119	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300025912\|Ga0207707_10464867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1082	Open in IMG/M
3300025921\|Ga0207652_10933956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	765	Open in IMG/M
3300026021\|Ga0208140_1045285	Not Available	583	Open in IMG/M
3300026109\|Ga0208774_1023352	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300026326\|Ga0209801_1276897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300027651\|Ga0209217_1026991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1813	Open in IMG/M
3300027824\|Ga0209040_10361977	Not Available	685	Open in IMG/M
3300027824\|Ga0209040_10544303	Not Available	506	Open in IMG/M
3300027882\|Ga0209590_10610065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 39-66-18	702	Open in IMG/M
3300027903\|Ga0209488_10717877	Not Available	715	Open in IMG/M
3300028047\|Ga0209526_10097330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2071	Open in IMG/M
3300028047\|Ga0209526_10131236	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300028047\|Ga0209526_10296267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Anderseniella → unclassified Anderseniella → Anderseniella sp.	1096	Open in IMG/M
3300028536\|Ga0137415_10008556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10142	Open in IMG/M
3300031446\|Ga0170820_13709882	Not Available	1168	Open in IMG/M
3300031543\|Ga0318516_10140594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1384	Open in IMG/M
3300031545\|Ga0318541_10216926	Not Available	1060	Open in IMG/M
3300031564\|Ga0318573_10712909	Not Available	539	Open in IMG/M
3300031640\|Ga0318555_10136518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1310	Open in IMG/M
3300031679\|Ga0318561_10622957	Not Available	594	Open in IMG/M
3300031682\|Ga0318560_10116367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1395	Open in IMG/M
3300031682\|Ga0318560_10180335	Not Available	1125	Open in IMG/M
3300031723\|Ga0318493_10597592	Not Available	615	Open in IMG/M
3300031724\|Ga0318500_10647780	Not Available	537	Open in IMG/M
3300031744\|Ga0306918_10012930	All Organisms → cellular organisms → Bacteria → Proteobacteria	4809	Open in IMG/M
3300031747\|Ga0318502_11025759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300031748\|Ga0318492_10783587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300031751\|Ga0318494_10499446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300031751\|Ga0318494_10951286	Not Available	504	Open in IMG/M
3300031770\|Ga0318521_10212775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1119	Open in IMG/M
3300031782\|Ga0318552_10639993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	542	Open in IMG/M
3300031792\|Ga0318529_10622934	Not Available	501	Open in IMG/M
3300031796\|Ga0318576_10255966	Not Available	826	Open in IMG/M
3300031879\|Ga0306919_11249587	Not Available	563	Open in IMG/M
3300031910\|Ga0306923_11128359	Not Available	843	Open in IMG/M
3300031912\|Ga0306921_10743864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tropica	1124	Open in IMG/M
3300031941\|Ga0310912_10672086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300031941\|Ga0310912_11192581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300031941\|Ga0310912_11250326	Not Available	564	Open in IMG/M
3300031946\|Ga0310910_10856548	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300031947\|Ga0310909_11061735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300031954\|Ga0306926_10032401	All Organisms → cellular organisms → Bacteria	6141	Open in IMG/M
3300031954\|Ga0306926_12708560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300032001\|Ga0306922_10070603	All Organisms → cellular organisms → Bacteria	3648	Open in IMG/M
3300032042\|Ga0318545_10192980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	728	Open in IMG/M
3300032052\|Ga0318506_10358059	Not Available	647	Open in IMG/M
3300032055\|Ga0318575_10718279	Not Available	505	Open in IMG/M
3300032059\|Ga0318533_10108687	Not Available	1928	Open in IMG/M
3300032065\|Ga0318513_10549564	Not Available	565	Open in IMG/M
3300032076\|Ga0306924_10007627	Not Available	10875	Open in IMG/M
3300032094\|Ga0318540_10328600	Not Available	738	Open in IMG/M
3300032205\|Ga0307472_102583476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	517	Open in IMG/M
3300032261\|Ga0306920_100278606	All Organisms → cellular organisms → Bacteria → Proteobacteria	2493	Open in IMG/M
3300032261\|Ga0306920_100602906	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300032261\|Ga0306920_101270958	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300032261\|Ga0306920_101481948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300032261\|Ga0306920_101668338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	904	Open in IMG/M
3300032261\|Ga0306920_101721570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300032261\|Ga0306920_102592328	Not Available	695	Open in IMG/M
3300033289\|Ga0310914_10524565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1071	Open in IMG/M
3300033289\|Ga0310914_11852081	Not Available	508	Open in IMG/M
3300033475\|Ga0310811_10496279	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300033513\|Ga0316628_102003366	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.86%
Host-Associated	Host-Associated	4.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.66%
Aquatic	Environmental → Aquatic	6.21%
Plants	Host-Associated → Plants	4.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.66%
Freshwater	Environmental → Aquatic → Freshwater	5.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.38%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.52%
Loam	Environmental → Terrestrial → Soil → Loam	5.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.07%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.07%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.07%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.69%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.69%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005898	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026021	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026109	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1009022792	3300004091	Bog Forest Soil	MAASSGLMIVEVERRFPVRIRIGVPPDGLGSRLDQIKAWLDENCGAEG
Ga0062389_1036433521	3300004092	Bog Forest Soil	MRNIMAASSKLMMIEAERRFPVRIRIGLPPEGLGQRLTEMTAWLDEN
Ga0062589_1028608542	3300004156	Soil	MAASSKLMIGEAERRFPVRIRIGVPPDGLGTRLDRITAWLEENCGADGWAITPSR
Ga0062590_1024156501	3300004157	Soil	MAASSKLMIGEAERRFPVRVRVAVPPDGLGTRLDRIKAWLDDNCGADGWAMTPSGLRG
Ga0062388_1010445701	3300004635	Bog Forest Soil	MAASSKLMMIEAERRFPVRIRIGVPLGGLGGRLDQMRAWL
Ga0062388_1021690942	3300004635	Bog Forest Soil	MAASSKLMMIEAERRFPVRIRIGLPPEGLGQRLTEMTAWLDEN
Ga0066688_107740162	3300005178	Soil	MAANSSFMIADAERHFPVRIRIGVPQDGLGSPLNQIKAWLGHNCGTNGWAITPLGY
Ga0070681_105508612	3300005458	Corn Rhizosphere	MAASPKLMIGDAERRFPVRIRIAVPPDGLGTRLDRIKST*
Ga0070733_110740633	3300005541	Surface Soil	MRASQRLLSDAERRFPVRVRVAVPPGGLGRQLQL*
Ga0068856_1023480552	3300005614	Corn Rhizosphere	MAASSKLMIGEAERRFPTRIRIAVPPEGLGRQLDDMMTWLDANCG
Ga0075276_100258363	3300005898	Rice Paddy Soil	MMAASSKLMVGEAERRFPVRVRIAVPAGGIGERLDRMQRW
Ga0070712_1017899202	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSRLMIGEAERRFPVRVRIGVPPQGLGSRLDELKAWLDDNCGADCWAM
Ga0066653_100734131	3300006791	Soil	MAASSKLMIGEAERRFPVRVRVAVPAGGLGTRLDR
Ga0079221_115941151	3300006804	Agricultural Soil	MAASSRLMIDEAERRFPVRIRIEVPPEGLGTRLDQLKA
Ga0075429_1017172501	3300006880	Populus Rhizosphere	MAASSKLMIGDAERRFPVRVRVAVPPHGLSARLDEIKSWLD
Ga0099830_107254712	3300009088	Vadose Zone Soil	MAASSNFMIAEAERRFPVRIRIGVPSDGLGSRLDRIKEWLDENCGASGWAMTFWHTRRAE
Ga0099830_109883001	3300009088	Vadose Zone Soil	MAASSKLMIEAERRLPIRIRIGVPPEGLGGRLDQMRAWLDGIC
Ga0099792_104030991	3300009143	Vadose Zone Soil	MITEAERRFPVRIRIAVPPEGLGVQLDNMKWWLDTNCGADNWAMTPSGL
Ga0099792_111309401	3300009143	Vadose Zone Soil	MIAEAERRFPVRIRIGVPPDGLGPRLDRIKVWLDENCGAE
Ga0105248_106640051	3300009177	Switchgrass Rhizosphere	MAASSKLMINEAERRFPVRIRLAVPPDGLGTRLDRIKTWLDENCGADAWAITP
Ga0105249_126651411	3300009553	Switchgrass Rhizosphere	MAASSKLMIGEAERRFPVRIRIGVPPDGLGTRLDRITAWLE
Ga0126373_120846331	3300010048	Tropical Forest Soil	MIAEAQRRFPVRIRIGVPPAGLGSRLDQIKVWLDENCGANGWAMTPSGTRGV
Ga0074044_100188174	3300010343	Bog Forest Soil	MMAASSRLMMTEAERRFPVRIRIGVPLEGLGGRLDQMRA*
Ga0126381_1028892561	3300010376	Tropical Forest Soil	MAASSGFFIAEAERRFPVRIRIGVPPDGLGSRLDQIKAWL
Ga0126381_1033322001	3300010376	Tropical Forest Soil	MAASSGFFIAEAERRFPVRIRIGVPPDGLGARLDQIKAWLDENCG
Ga0126383_131125302	3300010398	Tropical Forest Soil	MAASSGFLIAEAERRFPVRIRIGVPPDGLGYRLDQIKAWLDENCGAEGWAMTPS
Ga0137391_107080151	3300011270	Vadose Zone Soil	MAASSKLMIMEAERRFPVRIRVGVPLEGLGARLDQMRAWL
Ga0137391_114562062	3300011270	Vadose Zone Soil	MITEAERRFPVRIRIAVPPEGLGVQLDNMKWWLDTNCGADNWAM
Ga0137393_108615922	3300011271	Vadose Zone Soil	MISEAERRFPVRIRIGVPSDGLGSRLDRIKSWLDENC
Ga0137393_115542602	3300011271	Vadose Zone Soil	MIGEAERRFPVRIRIGVPPEGLGGRLHEMKAWLDDNCGAAGWAITPSGLRGVL
Ga0137448_11870411	3300011427	Soil	MAASSKLMIGEAERRFPMRIRIEVPPQGLGTRLDELKAWLDDNCGADCWA
Ga0120139_10430092	3300012019	Permafrost	MAASSRLMIGEAERRFPVRIRIEVPPEGLGGRLDQLKG
Ga0137383_103157722	3300012199	Vadose Zone Soil	MAASSRLMIGEAERRFPVRIRIGVPPEGLGARLDHLKAWLDD
Ga0137363_104518743	3300012202	Vadose Zone Soil	MIAEAERRFPVRIRIGIPPDGLGSRLDRIKEWLDENFGANRWAMTPLGDTRRAE*
Ga0137363_109593831	3300012202	Vadose Zone Soil	MIVEAERRFPVRIRIGVPPDGLGSRLDRTREWLDANCGASGWAMTP
Ga0137362_113134621	3300012205	Vadose Zone Soil	MIIEAERRFPVRIRIGIPLEGLGARLDQMRTWLDGNCGA
Ga0137380_101948351	3300012206	Vadose Zone Soil	MAASSRLMIGEAERRFPVRIRIAVPPEGFGSRLDE
Ga0137379_114046611	3300012209	Vadose Zone Soil	MAASSRLMIGEAERRFPVRIRIGVPPEGLGARLDHLKAWLDDNCGAGGWAMAPSGLR
Ga0137377_114450422	3300012211	Vadose Zone Soil	GLMIGDAERRFPVRIRIGVPPDGFGSRLDRIKEWLDENCGARMGGR*
Ga0137370_107090131	3300012285	Vadose Zone Soil	MIAEAERRFPVRIRVGVPPDGLGSRLDRIKVWLDENCG
Ga0137360_115860562	3300012361	Vadose Zone Soil	MAASSRLMIGEAERRFPVRIRIGVPPQGFGSRLDELKAWLDDNCG
Ga0137361_105751403	3300012362	Vadose Zone Soil	MAASSRLMINEAERRFPVRIRLAVPAVGLGERLDHIY
Ga0137390_110364941	3300012363	Vadose Zone Soil	MITEAERRFPVRIRIAVPPEGLGVQLDNMKWWLDTNCGADNWAMTPSGLR
Ga0137395_108013581	3300012917	Vadose Zone Soil	MIAEAERRFPVRIRIGVPPDGLAPRLDRIKVWLDENC
Ga0137395_112166451	3300012917	Vadose Zone Soil	MIAEAERRFPVRIRIGVPPDGLGSRLDRIKAWLDENCGANRWAMTPSG
Ga0137413_114614083	3300012924	Vadose Zone Soil	MAASSNFMIAEAERRFPVRIRIGVPSDGLGSRLDRIKSWLDE
Ga0137419_119566722	3300012925	Vadose Zone Soil	MIAEAERRFPVRIRIGVPSDGLGSRLDRIKSWLDENCGVSGWAMKPSG
Ga0137416_116131511	3300012927	Vadose Zone Soil	MAASSELMIIEAERRFPVRIRIGAPHEGLGARLDQMRAWLDANCGSDGWA
Ga0137410_110253961	3300012944	Vadose Zone Soil	MAAGSKLMITEAERRFPVRVRVGVPATGLGQRLNEMQGWLDEN*
Ga0137410_117063011	3300012944	Vadose Zone Soil	MAASSRLMIGEAERRFPVRIRIGVPPEGLGGRLDHLKAWLDDNCGAAGWAITPSGLRG
Ga0164305_117278231	3300012989	Soil	MAASSKLMIGEAERRFPVRVRVAVPPDGLGTRLDRIKAWLDDNCGAEGWAMTPS
Ga0163162_126347822	3300013306	Switchgrass Rhizosphere	MAASSKLMIGEAERRFPVRVRLAVPPDGLGTRLDRI
Ga0173480_107918721	3300015200	Soil	MAASSKLMIGEAERRFPVRVRLAVPPDGLGTRLDRIKAWLDDNCGIDGWAMTPSGLRGV
Ga0137418_102192272	3300015241	Vadose Zone Soil	MIAEAERRFPVRIRIGVPPDGLGSRLDRIKAWLDENCGANRWAMTPLGDTRRAE*
Ga0137403_104620791	3300015264	Vadose Zone Soil	MATSSKLMITEAERRFPVRVRVGVPATGLGQHLNEMQAWLDENCGANGWAM
Ga0182036_118709961	3300016270	Soil	MAASSGFMIAEAERRFPVRVRIGVPPEGLGPRLDRIKAWLDENAGANGW
Ga0182041_101958693	3300016294	Soil	MAASSGFMIAEADRRFPVRVRIGVPPAGLGPRLDRIKAWLDDNAGANGWAMTPSGT
Ga0182033_100947621	3300016319	Soil	MVAEAERRFPVRIRIGVPADGLGSRLDRIKAWLDENAGADGWAMTPSGTRGVLND
Ga0182033_106298121	3300016319	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGLRLDRIKAWLDENGGADGWAMTPSGTRGVLNDA
Ga0182033_107457751	3300016319	Soil	MAASSGFMIAEAERRFPVRVRIGVPPAGLGPRLDRIKAWLDENAGADGWAMTPSGTRG
Ga0182033_112459001	3300016319	Soil	MAASSGFMIAEAERRFPVRIRIGVPPDGLGSRLDQIKAWLNENAGVNGW
Ga0182035_118771551	3300016341	Soil	MAGSSGFMIAEAERRFPVRIRIGVPLDGLGPRLDRIKAWLDENA
Ga0182032_109926881	3300016357	Soil	MAASSGFMIAEAERRFPVRMRIGVPPDGLGPRLDRIKAWLDEN
Ga0182040_100557461	3300016387	Soil	MAASSAFMIAEAERRFPVRIRIGVPPDGLGYRLDGIKAWLDKNCGANGWAMTPSGTR
Ga0182040_101449341	3300016387	Soil	MMAASSGFMIAEAERRFPVRIRIRVPPDGLGPRLDRIKAWLDENAGANGWAMTPSGTRGV
Ga0182040_114882091	3300016387	Soil	VAKSSAFMIAEAERRFPVRIRIGVPPDGLRSRLDQIKGWLDEN
Ga0182040_116087892	3300016387	Soil	MAASSGFMIAEAERRFPGRVRIGVPPDGLGPRLDRIKTWLD
Ga0182040_119670191	3300016387	Soil	MAASSGFMIAEAERRFPVRVRMGVPPDGLGSRLDRIKVWLDESCGADGW
Ga0182037_112675893	3300016404	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGPRLDRIKAWLDENA
Ga0182037_119897542	3300016404	Soil	MAASSGFMIAEAERRFPVRVRIGVPPAGLGPRLDRIKAWL
Ga0182038_101097314	3300016445	Soil	MAASSGFMIAEADRRFPVRVRIGVPPAGLGPRLDRIKAWLDENAGANGWAMTPSGTRRPERRLIDLFQ
Ga0187802_101733932	3300017822	Freshwater Sediment	MLIEAERRFPVRIRVGVPLEGLGGRLDRMRVWLDENCGA
Ga0187778_110911601	3300017961	Tropical Peatland	MAASSRLMIGEAERRFPVRIRVAVPPQGLGSRRDAITAWLDDNCGAGGWAIGPSGLRG
Ga0187781_111671103	3300017972	Tropical Peatland	MAAASSKLMIGEAERRFPVRVRIAVPPEGLGTRLDQI
Ga0187769_113151962	3300018086	Tropical Peatland	MAASSGFMIAEAERHFPIRIRIGVPPDGLGPRLDRIKAWLDENAGANGWAMTPSGT
Ga0184647_14508321	3300019263	Groundwater Sediment	MAASSKLMIGQAERRFPVRIRVAVPPGGFGSRLNRIE
Ga0210406_103223322	3300021168	Soil	MAASSKLMIIEAERRFLVRIRIGVPPAGLGSRLDQMRAWLDGNCGADGW
Ga0210400_100625312	3300021170	Soil	MWLILPIVAASSKRMITEAERRFPVRIRIGAPIGGLGEGLNHMPA
Ga0210386_107757051	3300021406	Soil	MAASAKFMIFEAERRFPVRIRIGVPPDGLGSRLDQIKSW
Ga0213879_102889401	3300021439	Bulk Soil	MAASSGFMIGEAERRFPVRIRIGVPPDGLGSRLHQIK
Ga0126371_128559951	3300021560	Tropical Forest Soil	VAVSSGFMIPEAERRFPVRIRIGIPPDGLGSRLDHIKGWLDENCGASGWAMTPSGTRGVL
Ga0207680_107791192	3300025903	Switchgrass Rhizosphere	MAASSKLMIGEAERRFPVRIRLAVPPDGLGTRLDRI
Ga0207707_104648672	3300025912	Corn Rhizosphere	MAASPKLMIGDAERRFPVRIRIAVPPDGLGTRLDRIKST
Ga0207652_109339561	3300025921	Corn Rhizosphere	ASPKLMIGDAERRFPVRIRIAVPPDGLGTRLDRIKST
Ga0208140_10452851	3300026021	Rice Paddy Soil	MAASSRLMIGEAERHFPVRLRLAVPPEGLGGRRDAMTRWLDATCGADGW
Ga0208774_10233521	3300026109	Rice Paddy Soil	MMAASSKLMVGEAERRFPVRVRIAVPAGGIGERLDRMQRWLDEN
Ga0209801_12768971	3300026326	Soil	MVAEAERHFPVRIRIGVPQDGLGSRLDQIKAWLGHNCGTNGWAITPLWYTPRRP
Ga0209217_10269911	3300027651	Forest Soil	MAASFELMIAEAERRFPVRIRIGIPPDGLGSRLDWIGEWLDENCGANGWAMTPSGLRHRRDCT
Ga0209040_103619771	3300027824	Bog Forest Soil	MMVEAARRFLVRIRIGARPQGLGGRLDEKRAWLDGNCGTDGWALTPS
Ga0209040_105443031	3300027824	Bog Forest Soil	MAASSAFMIAEAERRFPVRIRIGVPPDGLGSRLDQIKRWLDENCGASG
Ga0209590_106100651	3300027882	Vadose Zone Soil	MAASSRLMIGEAERRFPVRIRIGVPPQGFGGRLDDVKAWLDD
Ga0209488_107178771	3300027903	Vadose Zone Soil	MAASSKLMMTEAEHRFPVRIRVAQPPGGFGVRLPEMHAW
Ga0209526_100973301	3300028047	Forest Soil	MAASSGLMIAEAERRFPVRIRIGIPPDGLGSRLDWIGEWLDENCGAN
Ga0209526_101312361	3300028047	Forest Soil	MLIEAERRFPVRIRIGVPPEGLGSRLDQMRAWLDGNCGAD
Ga0209526_102962671	3300028047	Forest Soil	MTASSSFMIAEAERRFPVRIRIGVPPDGLGSRLDGIKAWLDENCGANGWAMTPSGTRG
Ga0137415_1000855613	3300028536	Vadose Zone Soil	MAASSRLMIGEAERRFPVRIRIEVPPQGLGTRLDELKAWLDDNC
Ga0170820_137098821	3300031446	Forest Soil	LAGSSAFMIADAERRFPVRICISAPPDGLGSRLDRIK
Ga0318516_101405943	3300031543	Soil	MAASSGFMIAEAERRFPVRIRIGVRSAGLGGRLDQIKAWLDENAGTNGGR
Ga0318541_102169262	3300031545	Soil	MPATSGLMIAEAERRFPVRIRIAVPPDGLGPRLDQIKAW
Ga0318573_107129092	3300031564	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGPRLDRIKTWLDENAGADAWAMTP
Ga0318555_101365181	3300031640	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGSRLDRIKVWLDESCGADGWAMTPS
Ga0318561_106229572	3300031679	Soil	MIAEAERRFPVRIRIGVPPAGLGSRLDQIKTWLDENCGANGWALTPSG
Ga0318560_101163674	3300031682	Soil	VVRGLAEQIRNTTMAASSGFMIAEAERRFPVRIRIGVRSAGLGGRLDQIKAWLDENAGTNGGR
Ga0318560_101803353	3300031682	Soil	MAASSGFLIAEAERRFPVRIRIAVPPAGLGGRLDQIKAWLDENTGASHSLL
Ga0318493_105975921	3300031723	Soil	MAASSGFMIAEAERRFPVRIRIGVPPDGLGSRLDQIKAWLNENAGVNGWVM
Ga0318500_106477802	3300031724	Soil	MAASSGFMIAEAERRFPVRVRMGVPPDGLGSRLDRIKVWLDESCGADGWAMTPSG
Ga0306918_100129301	3300031744	Soil	MIAEAERCFPVRIRIGVPPDGLGSRLDRIKVWLDESCGADGWAMTPSGT
Ga0318502_110257591	3300031747	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGPRLDRIKTWLDENA
Ga0318492_107835871	3300031748	Soil	VCGSFRERRRNAMAASSGFMIAEAERRFPVRIRIAIPPDGLGSRLDQIKAWLDENAGTNGGR
Ga0318494_104994461	3300031751	Soil	MAASSGFMIAEAERRFPVRMRIGVPPDGLGPRLDRIKAWLDENAGRDGWAMTPSGTRGVLNDAL
Ga0318494_109512861	3300031751	Soil	MAASSAFMIAEAERRFPVRVRIGIPPDGLGYRLDGIKAWLD
Ga0318521_102127754	3300031770	Soil	NTTMAASSGFMIAEAERRFPVRIRIGVRSAGLGGRLDQIKAWLDENAGTNGGR
Ga0318552_106399932	3300031782	Soil	MVAEAERRFPVRIRIGVPADGLGSRLDRIKAWLDENAGADGWAM
Ga0318529_106229341	3300031792	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGPRLDRIKTWLDENAGANGWAMTPSGTRGVL
Ga0318576_102559661	3300031796	Soil	MPATSGLMIAEAERRFPVRIRIAVPPDGLGPRLDQIKAWLDENCGASGWAMTPSG
Ga0306919_112495871	3300031879	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGPRLDRIKTWLDENAGANGWAMTP
Ga0306923_111283592	3300031910	Soil	MAASSGFMIAEAERRFPVRVRVEVPPAGLGPRLDRIKTWLDENAGANGWAMTPSGTRGV
Ga0306921_107438641	3300031912	Soil	MAASSALMIAEAERRFPERIRIAVPPDRLGSRLDQIKGW
Ga0310912_106720861	3300031941	Soil	MAASSGFMIAEAERRFPVRVRIGVPPEGLGPRLDRIKAWLDENAGANGWVMTPSGTRGVLNDE
Ga0310912_111925812	3300031941	Soil	MAASSGLMIAEAERRFPVRIRIAVPQDGLGSRLDRIKAWLDENAGAYGWAMTPSGTRGV
Ga0310912_112503261	3300031941	Soil	MAASSGFFIAEAERRFPVRIRICVPPDGLGSRLDQIKAWLDENCGANGWAITPSGTRGV
Ga0310910_108565481	3300031946	Soil	MAASSGFMIAEAERRFPVRIRIAVPPDGLGSRLDTIKGWLDENAGASGRAMTPSGDTRRVER
Ga0310909_110617351	3300031947	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGYRLDGIKAWL
Ga0306926_1003240112	3300031954	Soil	MIAEAERRFPVRIRIGVPPDGLGSRLDRIKVWLDESCGADGWAMTPSGT
Ga0306926_127085601	3300031954	Soil	MAASSSFMIAEAERRFPVRVRIGVPSDGLGPRLDRIKAWLDDNAGANGWAMTPSGTRGVLND
Ga0306922_100706037	3300032001	Soil	IAEAERRFPVRIRIGVRSAGLGGRLDQIKAWLDENAGTNGGR
Ga0318545_101929801	3300032042	Soil	MVAEAERRFPVRIRIGVPADGLGSRLDRIKAWLDENAGADGWAMTPSGTRGVLN
Ga0318506_103580592	3300032052	Soil	MAASSGFMIAEAERRFPVRIRIGVRSAGLGGRLDQIKAW
Ga0318575_107182792	3300032055	Soil	MAASSGFLIAEAERRFPVRIRIAVPPAGLGGRLDQIKAWLDENTGASHSL
Ga0318533_101086876	3300032059	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGPRLDRIKTWLDENAGADAWAMTPSG
Ga0318513_105495641	3300032065	Soil	MAASSGFMIAEAERRFPVRVRIGVPPDGLGPRLDRIKAWLDENAGA
Ga0306924_1000762719	3300032076	Soil	MAASSGFRIAEAERRFPVRIRIGVRSAGLGGRLDQIKAWLDENAGTNGGR
Ga0318540_103286001	3300032094	Soil	MAASSGVMFAEAERRFPVRIRIGVPPAGLGPRLDQITAW
Ga0307472_1025834761	3300032205	Hardwood Forest Soil	MAASSTFMIAEAERRFPVRIRIGVPPDGLGPRLDRIKVWLDENCGAN
Ga0306920_1002786061	3300032261	Soil	MAASSGLMIAEAERRFPVRIRIAVPSAGLGGRLDQIKAWLDDNAGATG
Ga0306920_1006029061	3300032261	Soil	TPMAASSGFMIAEAERRFPVRIRIGVPPDGLGPRLDRIKAKHG
Ga0306920_1012709581	3300032261	Soil	MAASFGFMIAEAERRFPVRIRIRVPPAGLGSRLDQIKAWLDENAGG
Ga0306920_1014819484	3300032261	Soil	MIAEAERRFPVRIRIAVPQDGLGSRLDRIKAWLDENAGAYGWAMTP
Ga0306920_1016683381	3300032261	Soil	RRNTMAASSALMIAEAERRFPVRIRIAVPPDRLGSRLDQIKGWLDENCVRRAGR
Ga0306920_1017215701	3300032261	Soil	MAASSGFMIAEAERRFPIRVRIGVPPDGLGPRLDRI
Ga0306920_1025923281	3300032261	Soil	MAASSSFMIAEAERRFPVRVRIGVPSDGLGPRLDRIKAWLDDNAGANGWA
Ga0310914_105245651	3300033289	Soil	MAASSGLMIAEAERRFPVRVRIGVPPDGLGPRLDRIKAWLDEN
Ga0310914_118520812	3300033289	Soil	MAASSGFMIAEAERRFPVRVRIGVPPAGLGPRLDRIKAWLDENAGADGWAM
Ga0310811_104962792	3300033475	Soil	MAASSKLMIGEAERRFPVRVRVAVPADGLGTRLDRIKGWLDENCGADGWAITPSGLRGVRNDAI
Ga0316628_1020033662	3300033513	Soil	VAASSRLMIGEAERRFPVRIRIEVPAQGLGSRLDALKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050523

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences