Metagenome / Metatranscriptome Family F050519

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050519
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	86 residues
Representative Sequence	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQYPQRPQWQWQRLY
Number of Associated Samples	110
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.34 %
% of genes near scaffold ends (potentially truncated)	8.97 %
% of genes from short scaffolds (< 2000 bps)	77.93 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.759 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.828 % of family members)
Environment Ontology (ENVO)	Unclassified (31.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.517 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.09% β-sheet: 0.00% Coil/Unstructured: 73.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF06718	DUF1203	19.31
PF08546	ApbA_C	10.34
PF02558	ApbA	9.66
PF01613	Flavin_Reduct	5.52
PF02705	K_trans	2.76
PF02222	ATP-grasp	1.38
PF13561	adh_short_C2	1.38
PF02674	Colicin_V	1.38
PF00291	PALP	0.69
PF13419	HAD_2	0.69
PF14384	BrnA_antitoxin	0.69
PF07758	DUF1614	0.69
PF00990	GGDEF	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	10.34
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	5.52
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	2.76
COG1286	Colicin V production accessory protein CvpA, regulator of purF expression and biofilm formation	Cell wall/membrane/envelope biogenesis [M]	1.38
COG4089	Uncharacterized membrane protein	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.76 %
Unclassified	root	N/A	37.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.76 %
Unclassified	root	N/A	37.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.76 %
Unclassified	root	N/A	37.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.38 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.31 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.38 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.24 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.07 %
Thiolinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae	0.69 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.69 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.24 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.07 %
Thiolinea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.24 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.07 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.69 %
Thiolinea disciformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea → Thiolinea disciformis	0.69 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.24 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.07 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.69 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	0.69 %
Thiolinea disciformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea → Thiolinea disciformis	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.24 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.07 %
Rhodococcus sp. Chr-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. Chr-9	0.69 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.69 %
Thiolinea disciformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea → Thiolinea disciformis	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10005715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8701	Open in IMG/M
3300000567\|JGI12270J11330_10007894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	7316	Open in IMG/M
3300004635\|Ga0062388_100744496	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005435\|Ga0070714_100099555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2559	Open in IMG/M
3300005538\|Ga0070731_10032130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3548	Open in IMG/M
3300005591\|Ga0070761_10811945	Not Available	589	Open in IMG/M
3300005602\|Ga0070762_10013132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4201	Open in IMG/M
3300005602\|Ga0070762_10560900	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005610\|Ga0070763_10051034	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300005610\|Ga0070763_10142838	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300005921\|Ga0070766_10201138	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300005921\|Ga0070766_10450582	Not Available	849	Open in IMG/M
3300006050\|Ga0075028_100440024	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300006175\|Ga0070712_102025176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. Chr-9	504	Open in IMG/M
3300006176\|Ga0070765_100143050	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300006176\|Ga0070765_100283477	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300006176\|Ga0070765_100291093	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300006176\|Ga0070765_100456696	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300006176\|Ga0070765_101932301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea → Thiolinea disciformis	552	Open in IMG/M
3300006893\|Ga0073928_10076591	All Organisms → cellular organisms → Bacteria → Proteobacteria	2880	Open in IMG/M
3300006893\|Ga0073928_10485724	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300006893\|Ga0073928_11043291	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300009521\|Ga0116222_1171135	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300009522\|Ga0116218_1111527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1245	Open in IMG/M
3300009524\|Ga0116225_1008272	All Organisms → cellular organisms → Bacteria → Proteobacteria	5843	Open in IMG/M
3300009525\|Ga0116220_10021098	All Organisms → cellular organisms → Bacteria → Proteobacteria	2632	Open in IMG/M
3300009632\|Ga0116102_1201819	Not Available	534	Open in IMG/M
3300010343\|Ga0074044_10356181	Not Available	960	Open in IMG/M
3300010379\|Ga0136449_100079473	All Organisms → cellular organisms → Bacteria	6929	Open in IMG/M
3300010379\|Ga0136449_100448247	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300010880\|Ga0126350_11257457	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300011120\|Ga0150983_15497415	Not Available	501	Open in IMG/M
3300014165\|Ga0181523_10477102	Not Available	690	Open in IMG/M
3300014200\|Ga0181526_10556291	Not Available	725	Open in IMG/M
3300014489\|Ga0182018_10105690	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300014489\|Ga0182018_10179289	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300014501\|Ga0182024_10044256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7213	Open in IMG/M
3300014657\|Ga0181522_10369307	Not Available	856	Open in IMG/M
3300015089\|Ga0167643_1009989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300017938\|Ga0187854_10284099	Not Available	710	Open in IMG/M
3300017973\|Ga0187780_11171490	Not Available	563	Open in IMG/M
3300018025\|Ga0187885_10341255	Not Available	675	Open in IMG/M
3300019888\|Ga0193751_1063720	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300020021\|Ga0193726_1000543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	38991	Open in IMG/M
3300020579\|Ga0210407_10346660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1162	Open in IMG/M
3300020581\|Ga0210399_10335976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1261	Open in IMG/M
3300020582\|Ga0210395_10001767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16767	Open in IMG/M
3300020582\|Ga0210395_10010041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7047	Open in IMG/M
3300020583\|Ga0210401_10867079	Not Available	762	Open in IMG/M
3300020583\|Ga0210401_10986548	Not Available	701	Open in IMG/M
3300021168\|Ga0210406_10314835	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300021170\|Ga0210400_10240474	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300021171\|Ga0210405_10003139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16472	Open in IMG/M
3300021178\|Ga0210408_10083661	All Organisms → cellular organisms → Bacteria → Proteobacteria	2504	Open in IMG/M
3300021180\|Ga0210396_10098692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2643	Open in IMG/M
3300021180\|Ga0210396_10928155	Not Available	741	Open in IMG/M
3300021181\|Ga0210388_10539371	Not Available	1023	Open in IMG/M
3300021401\|Ga0210393_11088885	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300021402\|Ga0210385_10721902	Not Available	763	Open in IMG/M
3300021402\|Ga0210385_11513575	Not Available	512	Open in IMG/M
3300021403\|Ga0210397_10938776	Not Available	670	Open in IMG/M
3300021404\|Ga0210389_10229247	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300021404\|Ga0210389_11248426	Not Available	571	Open in IMG/M
3300021404\|Ga0210389_11323447	Not Available	551	Open in IMG/M
3300021420\|Ga0210394_10048829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3705	Open in IMG/M
3300021432\|Ga0210384_10262801	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300021433\|Ga0210391_10301507	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300021474\|Ga0210390_10103513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2377	Open in IMG/M
3300021474\|Ga0210390_10440068	All Organisms → cellular organisms → Bacteria → Proteobacteria	1100	Open in IMG/M
3300021477\|Ga0210398_10149700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1899	Open in IMG/M
3300021478\|Ga0210402_10367109	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300021478\|Ga0210402_10442310	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300021479\|Ga0210410_10564095	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300021559\|Ga0210409_10314611	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300021860\|Ga0213851_1387785	Not Available	764	Open in IMG/M
3300021861\|Ga0213853_10539747	Not Available	712	Open in IMG/M
3300022557\|Ga0212123_10378864	Not Available	956	Open in IMG/M
3300022557\|Ga0212123_10626636	Not Available	674	Open in IMG/M
3300022557\|Ga0212123_10634696	Not Available	668	Open in IMG/M
3300022724\|Ga0242665_10237601	Not Available	615	Open in IMG/M
3300024225\|Ga0224572_1002190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3103	Open in IMG/M
3300024225\|Ga0224572_1041453	Not Available	866	Open in IMG/M
3300024227\|Ga0228598_1039273	Not Available	934	Open in IMG/M
3300025906\|Ga0207699_10279593	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300025915\|Ga0207693_11185891	Not Available	576	Open in IMG/M
3300027030\|Ga0208240_1013152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300027090\|Ga0208604_1000043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17442	Open in IMG/M
3300027096\|Ga0208099_1031741	Not Available	755	Open in IMG/M
3300027104\|Ga0208095_1013153	Not Available	587	Open in IMG/M
3300027334\|Ga0209529_1036348	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300027439\|Ga0209332_1001819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4617	Open in IMG/M
3300027497\|Ga0208199_1041839	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300027567\|Ga0209115_1006054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2472	Open in IMG/M
3300027568\|Ga0208042_1025158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1534	Open in IMG/M
3300027583\|Ga0209527_1012890	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300027591\|Ga0209733_1036098	Not Available	1324	Open in IMG/M
3300027635\|Ga0209625_1004202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3121	Open in IMG/M
3300027684\|Ga0209626_1005254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2886	Open in IMG/M
3300027783\|Ga0209448_10052885	All Organisms → cellular organisms → Bacteria → Proteobacteria	1366	Open in IMG/M
3300027842\|Ga0209580_10552840	Not Available	572	Open in IMG/M
3300027855\|Ga0209693_10067070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1768	Open in IMG/M
3300027869\|Ga0209579_10006707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7581	Open in IMG/M
3300027879\|Ga0209169_10131011	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300027884\|Ga0209275_10355433	Not Available	821	Open in IMG/M
3300027889\|Ga0209380_10118145	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300027889\|Ga0209380_10146516	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300027895\|Ga0209624_10278601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1113	Open in IMG/M
3300027908\|Ga0209006_10562688	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300028906\|Ga0308309_10075268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2532	Open in IMG/M
3300028906\|Ga0308309_10805401	Not Available	816	Open in IMG/M
3300029636\|Ga0222749_10250120	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300029636\|Ga0222749_10379457	Not Available	745	Open in IMG/M
3300030759\|Ga0265745_1015298	Not Available	623	Open in IMG/M
3300030763\|Ga0265763_1002359	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300030815\|Ga0265746_1041261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300030847\|Ga0075405_11691576	Not Available	587	Open in IMG/M
3300030862\|Ga0265753_1013612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1116	Open in IMG/M
3300031018\|Ga0265773_1018050	Not Available	673	Open in IMG/M
3300031018\|Ga0265773_1021890	Not Available	636	Open in IMG/M
3300031057\|Ga0170834_106040871	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300031057\|Ga0170834_108329198	Not Available	838	Open in IMG/M
3300031090\|Ga0265760_10158862	Not Available	745	Open in IMG/M
3300031231\|Ga0170824_116641170	Not Available	988	Open in IMG/M
3300031231\|Ga0170824_123790398	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300031231\|Ga0170824_127546418	Not Available	660	Open in IMG/M
3300031247\|Ga0265340_10467000	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031469\|Ga0170819_16143178	Not Available	709	Open in IMG/M
3300031474\|Ga0170818_109742631	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300031474\|Ga0170818_110443430	Not Available	963	Open in IMG/M
3300031679\|Ga0318561_10098543	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300031708\|Ga0310686_104353203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2142	Open in IMG/M
3300031708\|Ga0310686_119394815	Not Available	516	Open in IMG/M
3300031912\|Ga0306921_12560405	Not Available	528	Open in IMG/M
3300031947\|Ga0310909_10240861	All Organisms → cellular organisms → Bacteria → Proteobacteria	1510	Open in IMG/M
3300031962\|Ga0307479_10878276	Not Available	870	Open in IMG/M
3300032160\|Ga0311301_10215012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3257	Open in IMG/M
3300032160\|Ga0311301_12575511	Not Available	565	Open in IMG/M
3300032180\|Ga0307471_101264843	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300032783\|Ga0335079_10640633	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300032783\|Ga0335079_10928385	Not Available	893	Open in IMG/M
3300032805\|Ga0335078_10718561	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300032955\|Ga0335076_11301772	Not Available	612	Open in IMG/M
3300033158\|Ga0335077_10114282	All Organisms → cellular organisms → Bacteria	3149	Open in IMG/M
3300033158\|Ga0335077_11986531	Not Available	541	Open in IMG/M
3300033803\|Ga0314862_0183147	Not Available	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.24%
Host-Associated	Host-Associated	2.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.52%
Aquatic	Environmental → Aquatic	11.72%
Plants	Host-Associated → Plants	2.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.52%
Freshwater	Environmental → Aquatic → Freshwater	6.90%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.76%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.72%
Loam	Environmental → Terrestrial → Soil → Loam	25.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.07%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	13.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.66%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.52%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.07%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.07%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.38%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_1000571516	3300000567	Peatlands Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSNYGCYGSFYTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY*
JGI12270J11330_100078946	3300000567	Peatlands Soil	MTGKTTLIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPSYPQYPQRPQWQWQRLY*
Ga0062388_1007444962	3300004635	Bog Forest Soil	MTGKTIVIAFALLLGATAIAAAQSQRNYGANGSSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQYPQRPQWQWQRLY*
Ga0070714_1000995554	3300005435	Agricultural Soil	MTGKTITLALALLVGATAMALAQSQRNYGANGPSNYGCYGSFNTGTVASTCPGTPEGGPWSQYRQYPQSPPYQQYPQAQQWQWQRLH*
Ga0070731_100321303	3300005538	Surface Soil	MTGKTILIALALLLGTSAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQQYQPYPQQPPYQPYPQRPQWQWQRLY*
Ga0070761_108119451	3300005591	Soil	MTGKTIALALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFYTGTAASNCPGTPEGGPWSQYRQYPQNPPYPQYPQGQQWQWQRLH*
Ga0070762_100131326	3300005602	Soil	MTGKTIMLAFALFVGTTAIAAAQSQRNYGANGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQAYPQNPQYPPYPQRPQWQWQRLY*
Ga0070762_105609002	3300005602	Soil	MTGKTITLAFALLIGASTIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY*
Ga0070763_100510343	3300005610	Soil	MTGKTIMLAFALLIGASTIAAAQSQRNYGANGPSSYGCYGSFSTGTAASNCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY*
Ga0070763_101428381	3300005610	Soil	MTGKTITLALVLLVGATAVAAAQSQRNYGANGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQAYPQNPQYPPYPQRPQWQWQRLY*
Ga0070766_102011382	3300005921	Soil	MTGKTITLAFALLIGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPQYPQRPPQWQWQRLY*
Ga0070766_104505822	3300005921	Soil	MTRKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQRPQWQWQRLY*
Ga0075028_1004400242	3300006050	Watersheds	MTGKTITLAIVLLVGATAVAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPEGGPWGQQYQPYAQQPPYPPYPQRRQWQWQRLY*
Ga0070712_1020251761	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSNYGCYGSFNTGTVASTCPGAPEGGPWSQYRQYPQSPPYQQYPQAQQWQWQRLH*
Ga0070765_1001430503	3300006176	Soil	MTGKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPTYPQYPQRPQWQWQRLY*
Ga0070765_1002834771	3300006176	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYSCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPQYPQRPQWQWQRLY*
Ga0070765_1002910931	3300006176	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASSCPGTPGGGPGSQYQPYPQNPPYPQYPQRPQWQWQRLY*
Ga0070765_1004566961	3300006176	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRPQWQWQRLY*
Ga0070765_1019323011	3300006176	Soil	MTGKTILIALALLLSTSAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQQYQPYPQQPPYQPYPQRPQWQWQRLY*
Ga0073928_100765915	3300006893	Iron-Sulfur Acid Spring	MTGKTITLAFALLVSATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQAYPQNPQYPQRPQWQWQRLY*
Ga0073928_104857242	3300006893	Iron-Sulfur Acid Spring	MTGKTITLAFALLVGATAVAAAQSQRNYGVNGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQYQQYPQNPQYPPYPQRPQWQWQRLY*
Ga0073928_110432912	3300006893	Iron-Sulfur Acid Spring	MTGKTILIALALLVGATAIAAAQSQRDYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQQPYPQNPPYPQRPQWQWQRLY*
Ga0116222_11711352	3300009521	Peatlands Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSNYGCYGSFYTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRKWQWQRLD*
Ga0116218_11115272	3300009522	Peatlands Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSNYGCYGSFYTGTAASSCPGTPEGGPWSQYRQYPQSPPYPQYPQGQHWQWQRLY*
Ga0116225_100827210	3300009524	Peatlands Soil	MMQRRVAQTTLGTTAAGRGLRRRHMTGKTITLALALLVGATAIAAAQSQRNYGANGPSNYGCYGSFYTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY*
Ga0116220_100210984	3300009525	Peatlands Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY*
Ga0116102_12018191	3300009632	Peatland	MMQRRVAPTTLSAGRGLRRRHMTGKTITLALALLVGATAIAAAQSQRNYGANGPSNYGCYGSFYTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY*
Ga0074044_103561812	3300010343	Bog Forest Soil	MTGKTVLLALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPQYPQRPQWQWQRLY*
Ga0136449_1000794739	3300010379	Peatlands Soil	MTGKTILIALALLLGATAIAAAQSQRNYGANGPTSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQRPQWQWQRLY*
Ga0136449_1004482473	3300010379	Peatlands Soil	MIGKTITLALALLVGATAIAAAQSQRNYGPNGSSSYGCYGSFYTGTAASSCPGTPEGGPWSQYRQYPQSPPYPQYPQGQQWQWQRLH*
Ga0126350_112574572	3300010880	Boreal Forest Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQYPQRPQWQWQRLY*
Ga0150983_154974151	3300011120	Forest Soil	MTGKTILIALALLLGATAIAAAQSQRNYGANGPSSYDCYGSFSTGTAASRCPGTPEGGPGSQYQPYPQNPQYPPYPQRPQWQWQRLY*
Ga0181523_104771021	3300014165	Bog	MTGKTIMLAFTLLIGASTIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWSQSQYRPYPQNPPYPQQYPQGSQWQWQRLH*
Ga0181526_105562913	3300014200	Bog	MTGKTITLAFALLIGASTIAAAQSQRNYGANGPSSYGCYGSFSTGTVASSCPGTPEGGPLAQQYQPYPQQPPYPQYPQRRQWQWQRLY*
Ga0182018_101056903	3300014489	Palsa	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWSQSQYRPYPQNPPYPQQYPQGSQWQWQRLH*
Ga0182018_101792892	3300014489	Palsa	MTGKTIVIALALLLGATAIAAAQSQRSYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQYPQRPQWQWQRLY*
Ga0182024_1004425611	3300014501	Permafrost	MTGKTITLALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNQPYPQYPQRPQWQWQRLY*
Ga0181522_103693072	3300014657	Bog	MTGKTITLALALLVGATAIAAAQSQRDYGPNGPSSYGCYGSFSTGTAASSCPGTPEGGPGSQYRQYPQSPPYPQYPQRQQWQWQRLH*
Ga0167643_10099891	3300015089	Glacier Forefield Soil	MTGKTITLAFALLVGATALAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPAAQQYQPYSQQPPYPQYPQRPQWQWQRLY*
Ga0187854_102840992	3300017938	Peatland	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSNYGCYGSFYTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY
Ga0187780_111714901	3300017973	Tropical Peatland	MTGKTITIAFALLAGATATALAQSQRNFGPNGPSSYGCYGQAYTGTAASNCPGTGPGPSSQYLPYPQYPGQYQQYPQSQYPQRPQWQWQRLY
Ga0187885_103412551	3300018025	Peatland	MSGKTITLALALLVGATAIAAAQSQRNYGGGGPSNYGCYGSFATGTAASRCPGTPEGGPWAQQPYPQQPPYPQYPQRRQWQWQRLY
Ga0193751_10637203	3300019888	Soil	MTGKTIGIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGLQYQPYPQNPQYPQRPQWQWQRLY
Ga0193726_100054310	3300020021	Soil	MTGKTITLALALLVGATATAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGSGPGPQQYQPYPQQPPYQQYPRRQWQWERLY
Ga0210407_103466603	3300020579	Soil	MTGKTILIALALLLGATASAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQYPQRPQWQWQRLY
Ga0210399_103359761	3300020581	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPTYPQYPQRPQWQWQRLY
Ga0210395_100017678	3300020582	Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAAASCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY
Ga0210395_100100419	3300020582	Soil	MTGKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPTYPQYPQRPQWQWQRLY
Ga0210401_108670792	3300020583	Soil	MTGKTITLAFALFVGTTAIAAAQSQRNYGANGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQAYPQNPQYPPYPQRPQWRWQRLY
Ga0210401_109865482	3300020583	Soil	MTGKTIVIALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQPYPQNPQYPQRPQWQWQRLY
Ga0210406_103148353	3300021168	Soil	MTGKTITLAFALFVGTTAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGSGAQQYQPYPQQPPYPQYPQRPQWQWQRLY
Ga0210400_102404743	3300021170	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPQYPPYPQRPQWQWQRLY
Ga0210405_1000313922	3300021171	Soil	MTGKTIMLALALLLGTGAIAAAQSQRNYGANGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQPYPQNPQYPPYPQRPQWQWQRLY
Ga0210408_100836612	3300021178	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQSYPQNPQYP
Ga0210396_100986923	3300021180	Soil	MTGKTILIALALLLGATASAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYRPYPQNPPYPQYPQRPQWQWQRLY
Ga0210396_109281552	3300021180	Soil	MTGKTIALALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFYTGTAASNCPGTPEGGPWSQYRQYPQNPPYPQYPQGQQWQWQRLH
Ga0210388_105393711	3300021181	Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAAASCPGTPEGGPWAQQYQPYAQQPPYPQYPQRRQWQWQRLY
Ga0210393_110888852	3300021401	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQYPQRPQWQWQRLY
Ga0210385_107219022	3300021402	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASSCPGTPGGGPGSQYQPYPQNPPYPQYPQRPQWQWQRLY
Ga0210385_115135751	3300021402	Soil	KTIALALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFYTGTAASNCPGTPEGGPWSQYRQYPQNPPYPQYPQGQQWQWQRLH
Ga0210397_109387761	3300021403	Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYAQQPPYPQYPQRRQWQWQRLY
Ga0210389_102292472	3300021404	Soil	MTGKTIMLAFALFVGTTAIAAAQSQRNYGADGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQAYPQNPQYPPYPPRPQWQWQRLY
Ga0210389_112484262	3300021404	Soil	MIGKTITLALVLLVGATAITAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPQYPPYPQRPQWQWQRLY
Ga0210389_113234472	3300021404	Soil	MTGKTITLAFALFVGTTAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQYQQYPQYPQYPQYPQRPQWQWQRLY
Ga0210394_100488294	3300021420	Soil	MTGKTITLALMLLVGATAIAAAQSQRDYGPNGPSSYGCYGSFSTGTAASSCPGTPEGGPGSQYRQYPQSPPYPQYPQRQQWQWQRLH
Ga0210384_102628011	3300021432	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRPQWQWQRLY
Ga0210391_103015071	3300021433	Soil	ILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPTYPQYPQRPQWQWQRLY
Ga0210390_101035134	3300021474	Soil	MTGKTILIALALLLGATASAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYRPYPQNPQYPQRPQWQWQRLY
Ga0210390_104400683	3300021474	Soil	MTGKTIMLTFALFVGTTAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGSQYQPYPQNPQYPPYQQRPQWQWQRLY
Ga0210398_101497001	3300021477	Soil	MTGKTITLALALLIGATAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQQYQPYPQQPPYPQYPQRPQWQWQRLY
Ga0210402_103671093	3300021478	Soil	MTGKTIGIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQQYPQNPQYPPYPQRPQWQWQRLY
Ga0210402_104423102	3300021478	Soil	MTGKTITLAFALLVGATAVAAAQSQRNYGANGPGSYGCYGSFSTGTVASRCPGTPEGGPGSQYQSYPQYPQYPQRPQWQWQRLY
Ga0210410_105640952	3300021479	Soil	MSGKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQSYPQNPQYPQYPQRPQWQWQRLY
Ga0210409_103146112	3300021559	Soil	MTGKTILIALALLLGATASAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYRPYPQNPPYPQRPQWQWQRLY
Ga0213851_13877852	3300021860	Watersheds	MTGKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQYPQRPQWQWQRLY
Ga0213853_105397472	3300021861	Watersheds	MTGKTIMIALALLLGATAVAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQQYQPYPQQPPYPQYPQRPQWQWQRLY
Ga0212123_103788642	3300022557	Iron-Sulfur Acid Spring	MTGKTITLAFALLVSATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQAYPQNPQYPQRPQWQWQRLY
Ga0212123_106266363	3300022557	Iron-Sulfur Acid Spring	IALALLVGATAIAAAQSQRDYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQQPYPQNPPYPQRPQWQWQRLY
Ga0212123_106346962	3300022557	Iron-Sulfur Acid Spring	MTGKTITLAFALLVGATAVAAAQSQRNYGVNGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQYQQYPQNPQYPPYPQRPQWQWQRLY
Ga0242665_102376012	3300022724	Soil	MTGKTIMLTFALFVGTTAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGSQYQPYPQNPQYPPYPQRPQWQWQRLY
Ga0224572_10021901	3300024225	Rhizosphere	MTGKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNSSYPQYPQRPQWQWQRLY
Ga0224572_10414532	3300024225	Rhizosphere	MTGKTILIALALLLGATASAAAQSQRNYGADGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPPYPQRPQWQWQRLH
Ga0228598_10392732	3300024227	Rhizosphere	MTGKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPSYPQYPQRPQWQWQRLY
Ga0207699_102795933	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTGKTITLALALLVGATAAAAAQSQRNYGANGPANYGCYGSFYTGTVASACPGTAEGGPWSQYRQYPQSPPYQQYPQAQQWQWQRLH
Ga0207693_111858911	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSNYGCYGSFNTGTVASTCPGAPEGGPWSQYRQYPQSPPYQQYPQAQQWQWQRLH
Ga0208240_10131523	3300027030	Forest Soil	MTGKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQPYPQNPQYPPYPQRPQWQWQRLY
Ga0208604_10000437	3300027090	Forest Soil	MTGKTIMLAFALLVGATALAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPEAGPWAQQYQPYPQQPPYPQYPQRPQWQWQRLY
Ga0208099_10317412	3300027096	Forest Soil	MTGKTITLAFALLVGATALAAAQSQRNYGANGPGSYGCYGSFSTGTVASRCPGTPEGGPGSQYRPYPQNPPYPQRPQWQWQRLY
Ga0208095_10131531	3300027104	Forest Soil	MTGKTIVIALALLVGATAVATAQSQRNYGANGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQQYPQNPQYPQYPQRPQWQWQRLY
Ga0209529_10363482	3300027334	Forest Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGSGPWAQQYQPYPQQPP
Ga0209332_10018192	3300027439	Forest Soil	MTGKILIALALLLGATASAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPLYPPYPQRPQWQWQRLY
Ga0208199_10418392	3300027497	Peatlands Soil	MTGKTTLIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPSYPQYPQRPQWQWQRLY
Ga0209115_10060543	3300027567	Forest Soil	MTGKTITLAFALLVGATATAAAQSQRNYGANGPGSYGCYGSFSTGTAASSCPGTPEGGPWSQSQYRPYPQNPPYPQQYPQGSQWQWQRLH
Ga0208042_10251581	3300027568	Peatlands Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQW
Ga0209527_10128902	3300027583	Forest Soil	MTGKTITLAFALLVGATAVAAAQSQRNYGANGPGSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRPQWQWQRLY
Ga0209733_10360983	3300027591	Forest Soil	MTGKTITLAFALLVGATALAAAQSQRNYGANGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQQYPQNPQYPQRPQWQWQRLY
Ga0209625_10042021	3300027635	Forest Soil	MTGKTILIALALLLGATAVAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPY
Ga0209626_10052544	3300027684	Forest Soil	MTGKTIMLAFAVLVGATALAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQQYQPYPQQPPYPQYPQRPQWQWQRLY
Ga0209448_100528853	3300027783	Bog Forest Soil	MTGKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPESGPGSQYQPYPQNPQYPQRPQWQWQRLY
Ga0209580_105528402	3300027842	Surface Soil	MTAKTITLALALLVGATAMALAQSQRNYGANGPSNYGCYGSFYTGTVASTCPGAPEGGPWSQYRQYPQSPPYQQYPQAQQWQWQRLH
Ga0209693_100670701	3300027855	Soil	IGASTIAAAQSQRNYGANGPSSYGCYGSFSTGTAASNCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY
Ga0209579_100067072	3300027869	Surface Soil	MTGKTILIALALLLGTSAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQQYQPYPQQPPYQPYPQRPQWQWQRLY
Ga0209169_101310113	3300027879	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPRAQYQPYPQNPQYPPYPQRPQWQWQRLY
Ga0209275_103554331	3300027884	Soil	MTGKTILIALALLLGTSAIAAAQSQRNYGANGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQAYPQNPQYPPYPQRPQWQWQRLY
Ga0209380_101181452	3300027889	Soil	MTGKTITLAFALLIGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPQYPQRPPQWQWQRLY
Ga0209380_101465163	3300027889	Soil	MTRKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPQYPQRPQWQWQRLY
Ga0209624_102786013	3300027895	Forest Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPFAQQYQPYPQQPPYPQYPQRRQWQWQRLY
Ga0209006_105626883	3300027908	Forest Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGAQYQPYPQNPQYPPYPQRPQWQWQRLY
Ga0308309_100752683	3300028906	Soil	MTGKTILIALALLLSTSAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQQYQPYPQQPPYQPYPQRPQWQWQRLY
Ga0308309_108054012	3300028906	Soil	MTGKTITLAFAILVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRPQWQWQRLY
Ga0222749_102501202	3300029636	Soil	MTGKTITLAFALLVGATAVAAAQSQRNYGANGPGSYGCYGSFSTGTAASRCPGTPEGGPGSQYQPYPQNPQYPQYPQRPQWQWQRLY
Ga0222749_103794572	3300029636	Soil	MTGKTILIALALLLGATAFAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPTYPQYPQRPQWQWQRLY
Ga0265745_10152981	3300030759	Soil	MTGKTIVIALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPTYPQYPQRPQWQWQRLY
Ga0265763_10023591	3300030763	Soil	MTGKTILIALALLLGATASAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQQYPQNPQYPPYPQRPQWQWQRLY
Ga0265746_10412611	3300030815	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRL
Ga0075405_116915762	3300030847	Soil	MSATKIIVVLALLIGTTSIAAAQSQRNYGANGPGSYSCYGSFSTGTVASSCPGTPGAGPGAQQYQPYSQQPPYPQYPQRPQWQWQRLY
Ga0265753_10136121	3300030862	Soil	MTGKTIGIALALLLGATAIAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQQYQPYSQQPPYPQYPQRPQWQWQRLY
Ga0265773_10180501	3300031018	Soil	MTGKTILIALALLLGATASAAAQSQRNYGADGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQAYPQNPQYPPYPPRPQWQWQRLY
Ga0265773_10218901	3300031018	Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQQYPQNPQYPPYPQRPQWQWQRLY
Ga0170834_1060408712	3300031057	Forest Soil	MTGKTITLAFALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASSCPGTPGGGPGSQYQPYPQNPPYPQYPRRPQWQWQRLY
Ga0170834_1083291981	3300031057	Forest Soil	MTGKTILIALAALLGATSIAAAQSQRNYGANGPSSYACSGSFYPGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY
Ga0265760_101588622	3300031090	Soil	MTRKTILIALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTVASRCPGTPEGGPGSQYQPYPQNPSYPQYPQRPQWQWQRLY
Ga0170824_1166411701	3300031231	Forest Soil	VGTTAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQSYPQNPQYPPYPQRPQWQWQRLY
Ga0170824_1237903982	3300031231	Forest Soil	MTGKTITLALVLLVGATAVAAAQSQRNYGANGPGSYSCYGSFSTGTVASSCPGTPGAGPGAQQYQPYSQQPPYPQYPQRPQWQWQRLY
Ga0170824_1275464181	3300031231	Forest Soil	MTGKTTTLALALLVGATAIAAAQSQRNYGANGPSSYACSGSFYPGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY
Ga0265340_104670001	3300031247	Rhizosphere	MTGKTITLAFALLVGATAVAAAQSQRNYGANGPGSYGCYGSFSTGTVASSCPGTPGAGPGAQQYQPYSQQPSYPQYPQRPQWQWQRLY
Ga0170819_161431781	3300031469	Forest Soil	VIALALLVGATAIALAQSQRNYGTNGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQCQPYQQNPPYPQRPQWQWQRLY
Ga0170818_1097426312	3300031474	Forest Soil	MTGKTILIALALLLGATAVAAAQSQRNYGANGPGSYSCYGSFSTGTVASSCPGTPGAGPGAQQYQPYSQQPPYPQYPQRPQWQWQRLY
Ga0170818_1104434303	3300031474	Forest Soil	MTGKTILIALALLLGATVIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQQYPQNPQYPQYPQRPQWQWQRLY
Ga0318561_100985432	3300031679	Soil	MTGKTITIALALLAGATSTALAQSQRNFGPNGPSSYGCYGQAYTGTAASDCPGTGPGPSSSQYLPYPQYPGQYQQSPYPQRPQWQWQRLY
Ga0310686_1043532033	3300031708	Soil	MTGKTILIALALLLGATASAAAQSQRNYGADGPSSYGCYGSSSTGTAASRCPGTPEGGPGSQYQPYPQNAPYPQYPQRPQWQWQRLH
Ga0310686_1193948151	3300031708	Soil	MTGKTIVIALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQQYPQNPQYPQYPQRPQWQWQRLY
Ga0306921_125604051	3300031912	Soil	MTGKTITIALALLAGATSTALAQSQRNFGPNGPSSYGCYGQAYTGTAASDCPGTGPGPSSSQYLPYPQYPGQYQQSLYPQRPQWQWQRLY
Ga0310909_102408611	3300031947	Soil	MTGKTITIALALLAGATSTALAQSQRNFGPNGPSSYGCYGQAYTGTAASDCPGTGPGPSSSQYLPYPQYPGQYQQSPYP
Ga0307479_108782762	3300031962	Hardwood Forest Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSNYGCYGSFYTGTVASTCPGTPEGGPWSQYRQYPQSPPYQQYPQAQQWQWQRLH
Ga0311301_102150123	3300032160	Peatlands Soil	MIGKTITLALALLVGATAIAAAQSQRNYGPNGSSSYGCYGSFYTGTAASSCPGTPEGGPWSQYRQYPQSPPYPQYPQGQQWQWQRLH
Ga0311301_125755112	3300032160	Peatlands Soil	MTGKTITLALALLVGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQYPQRRQWQWQRLY
Ga0307471_1012648432	3300032180	Hardwood Forest Soil	MTGKTIMLACALLVGATAIAAAQSQRNYGADGPGSYGCYGSFSTGTAASSCPGTPEGGPWAQQYQPYPQQPPYPQ
Ga0335079_106406332	3300032783	Soil	MTGKTITIALALLAGATSTALAQSQRNFGPNGPSSYGCYGQAYTGTAASNCPGTGPGPSSLYQPYPRYPGQYQQYPQSQYPQRPQWQWQRLY
Ga0335079_109283851	3300032783	Soil	MSGKTITVALALLAGASSAALAQSQRNFGSNGPSSYGCYGEAYTGTAASNCPGTGPGPSSSQYLPYPQYPGQYQQYPQPQYPQRPQWQWQRLY
Ga0335078_107185613	3300032805	Soil	MTGKTILFALALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQPYPQYPQYPPYPQRPQWQWQRLY
Ga0335076_113017722	3300032955	Soil	LALLLGATAIAAAQSQRNYGANGPSSYGCYGSFSTGTAASRCPGTPEGGPGSQYQPYPQYPQYPPYPQRPQWQWQRLY
Ga0335077_101142823	3300033158	Soil	MTGKTITIALALLAGATSTALAQSQRNFGPNGPSSYGCYGQAYTGTAASNCPGTGPGPSSLYQPYPQYPGQYPQYPQAQYPQRPQWQWQRLY
Ga0335077_119865311	3300033158	Soil	MTGKTMMIALALLVGASSTASAQSQRNFGPNGPSSYGCYGQAYTGTAASNCPGTGPGPSSQYEHYPQYPGQNQPYPPQYPQRPQWQWQRLY
Ga0314862_0183147_80_361	3300033803	Peatland	MTMTGKTMMIAFALLAGATSTALAQSQRNFGPNGPSSYGCYGEAYTGTAASNCPGTGPGPSSQYQPYPQYPGQYQPYPPQYPQRPQWQWQRLY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences