Metagenome / Metatranscriptome Family F050502

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050502
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	38 residues
Representative Sequence	VPYIPMGEYWQSTAYRKDLLDVLPGCFAVFYGVRRA
Number of Associated Samples	114
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.59 %
% of genes near scaffold ends (potentially truncated)	91.72 %
% of genes from short scaffolds (< 2000 bps)	92.41 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.103 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.138 % of family members)
Environment Ontology (ENVO)	Unclassified (54.483 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.207 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.69% β-sheet: 0.00% Coil/Unstructured: 70.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00496	SBP_bac_5	16.55
PF07883	Cupin_2	4.83
PF04392	ABC_sub_bind	2.76
PF03352	Adenine_glyco	2.76
PF13649	Methyltransf_25	2.07
PF02518	HATPase_c	1.38
PF00293	NUDIX	1.38
PF13432	TPR_16	1.38
PF01436	NHL	1.38
PF04993	TfoX_N	1.38
PF02668	TauD	0.69
PF00536	SAM_1	0.69
PF00589	Phage_integrase	0.69
PF00485	PRK	0.69
PF13384	HTH_23	0.69
PF07746	LigA	0.69
PF04909	Amidohydro_2	0.69
PF09297	zf-NADH-PPase	0.69
PF16861	Carbam_trans_C	0.69
PF01204	Trehalase	0.69
PF07690	MFS_1	0.69
PF01070	FMN_dh	0.69
PF14224	DUF4331	0.69
PF00326	Peptidase_S9	0.69
PF00476	DNA_pol_A	0.69
PF00941	FAD_binding_5	0.69
PF03729	DUF308	0.69
PF03976	PPK2	0.69
PF00149	Metallophos	0.69
PF13561	adh_short_C2	0.69
PF06627	DUF1153	0.69
PF11860	Muramidase	0.69
PF01209	Ubie_methyltran	0.69
PF03060	NMO	0.69
PF00889	EF_TS	0.69
PF12848	ABC_tran_Xtn	0.69
PF13565	HTH_32	0.69
PF13302	Acetyltransf_3	0.69
PF04229	GrpB	0.69
PF08388	GIIM	0.69
PF00012	HSP70	0.69
PF02826	2-Hacid_dh_C	0.69
PF07080	DUF1348	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.76
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	2.76
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	1.38
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.69
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	0.69
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.69
COG2816	NADH pyrophosphatase NudC, Nudix superfamily	Nucleotide transport and metabolism [F]	0.69
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.69
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.69
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.69
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.69
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.69
COG1626	Neutral trehalase	Carbohydrate transport and metabolism [G]	0.69
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.69
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.69
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.69
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.69
COG0264	Translation elongation factor EF-Ts	Translation, ribosomal structure and biogenesis [J]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	73.10 %
Unclassified	root	N/A	6.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.38 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	66.90 %
Unclassified	root	N/A	6.90 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.69 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	15.17 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.28 %
Unclassified	root	N/A	6.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.07 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.69 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.69 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	9.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.28 %
Unclassified	root	N/A	6.90 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.69 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.69 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.28 %
Unclassified	root	N/A	6.90 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	4.14 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.69 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.69 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.28 %
Unclassified	root	N/A	6.90 %
Acetobacteraceae bacterium AT-5844	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	4.14 %
Desulfobacterales bacterium RIFOXYA12_FULL_46_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium RIFOXYA12_FULL_46_15	0.69 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.69 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_13086464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	659	Open in IMG/M
3300000955\|JGI1027J12803_109342458	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300004082\|Ga0062384_100542188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300005471\|Ga0070698_101981495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300005471\|Ga0070698_102006574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	532	Open in IMG/M
3300005548\|Ga0070665_101749430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300005554\|Ga0066661_10518578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	718	Open in IMG/M
3300005568\|Ga0066703_10623877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300005569\|Ga0066705_10944127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300005576\|Ga0066708_10592245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300005610\|Ga0070763_10077863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1634	Open in IMG/M
3300005614\|Ga0068856_100684722	All Organisms → cellular organisms → Bacteria → Proteobacteria	1046	Open in IMG/M
3300005618\|Ga0068864_101525534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300006041\|Ga0075023_100565388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	523	Open in IMG/M
3300006176\|Ga0070765_100391375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1296	Open in IMG/M
3300006796\|Ga0066665_11698341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	500	Open in IMG/M
3300006854\|Ga0075425_101821937	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300007822\|Ga0104325_100996	Not Available	1014	Open in IMG/M
3300009143\|Ga0099792_10028087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2581	Open in IMG/M
3300010047\|Ga0126382_10431438	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300010048\|Ga0126373_10466387	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300010048\|Ga0126373_10636364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1121	Open in IMG/M
3300010048\|Ga0126373_11960350	Not Available	648	Open in IMG/M
3300010048\|Ga0126373_11960734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	648	Open in IMG/M
3300010048\|Ga0126373_11994568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300010321\|Ga0134067_10236043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300010323\|Ga0134086_10275240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300010359\|Ga0126376_11925620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	631	Open in IMG/M
3300010361\|Ga0126378_10046812	All Organisms → cellular organisms → Bacteria → Proteobacteria	4005	Open in IMG/M
3300010366\|Ga0126379_11811337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300010376\|Ga0126381_102090333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
3300010376\|Ga0126381_103867103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300010398\|Ga0126383_11785701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300010398\|Ga0126383_11881177	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300011270\|Ga0137391_10488630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1043	Open in IMG/M
3300012202\|Ga0137363_10837044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300012205\|Ga0137362_10773913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	823	Open in IMG/M
3300012350\|Ga0137372_11165106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300012930\|Ga0137407_11949006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	560	Open in IMG/M
3300012948\|Ga0126375_11587041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300012958\|Ga0164299_11624945	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300015374\|Ga0132255_101014191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1245	Open in IMG/M
3300016270\|Ga0182036_11280247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	611	Open in IMG/M
3300016270\|Ga0182036_11762317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300016319\|Ga0182033_10178140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1670	Open in IMG/M
3300016341\|Ga0182035_11158511	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300016357\|Ga0182032_11125713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300016387\|Ga0182040_10639987	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300016404\|Ga0182037_10435488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1087	Open in IMG/M
3300016445\|Ga0182038_10849888	Not Available	802	Open in IMG/M
3300016445\|Ga0182038_11758746	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300018085\|Ga0187772_11234264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium RIFOXYA12_FULL_46_15	551	Open in IMG/M
3300018468\|Ga0066662_11951581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300018468\|Ga0066662_12579664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300018482\|Ga0066669_10655418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	923	Open in IMG/M
3300020580\|Ga0210403_10666895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300021178\|Ga0210408_10123028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2046	Open in IMG/M
3300021178\|Ga0210408_10723261	Not Available	783	Open in IMG/M
3300021403\|Ga0210397_10146338	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300021407\|Ga0210383_11043431	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300021445\|Ga0182009_10196180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	981	Open in IMG/M
3300021478\|Ga0210402_11371494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300022531\|Ga0242660_1068005	Not Available	815	Open in IMG/M
3300025929\|Ga0207664_10519369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067	Open in IMG/M
3300025939\|Ga0207665_10640638	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300026095\|Ga0207676_10183860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1833	Open in IMG/M
3300026305\|Ga0209688_1037591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300027383\|Ga0209213_1098543	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300027610\|Ga0209528_1151809	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300027635\|Ga0209625_1001391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5690	Open in IMG/M
3300027651\|Ga0209217_1072254	Not Available	1011	Open in IMG/M
3300027986\|Ga0209168_10383141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300031543\|Ga0318516_10290540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300031544\|Ga0318534_10574855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	641	Open in IMG/M
3300031545\|Ga0318541_10004030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	5993	Open in IMG/M
3300031545\|Ga0318541_10189250	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300031545\|Ga0318541_10727458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300031549\|Ga0318571_10075247	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031561\|Ga0318528_10327503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300031572\|Ga0318515_10383147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	753	Open in IMG/M
3300031572\|Ga0318515_10512087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300031572\|Ga0318515_10561600	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031573\|Ga0310915_10222054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1325	Open in IMG/M
3300031573\|Ga0310915_10330677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1079	Open in IMG/M
3300031573\|Ga0310915_10965728	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031640\|Ga0318555_10234289	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300031679\|Ga0318561_10700431	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031681\|Ga0318572_10932151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300031713\|Ga0318496_10812890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300031719\|Ga0306917_10567445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300031723\|Ga0318493_10306411	Not Available	858	Open in IMG/M
3300031736\|Ga0318501_10308501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	845	Open in IMG/M
3300031751\|Ga0318494_10615980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300031765\|Ga0318554_10254434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1000	Open in IMG/M
3300031768\|Ga0318509_10684632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	570	Open in IMG/M
3300031770\|Ga0318521_10388511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	831	Open in IMG/M
3300031777\|Ga0318543_10360444	Not Available	651	Open in IMG/M
3300031780\|Ga0318508_1077657	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300031793\|Ga0318548_10532170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	573	Open in IMG/M
3300031795\|Ga0318557_10595411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300031797\|Ga0318550_10219343	Not Available	922	Open in IMG/M
3300031797\|Ga0318550_10526584	Not Available	569	Open in IMG/M
3300031798\|Ga0318523_10015551	All Organisms → cellular organisms → Bacteria	3207	Open in IMG/M
3300031819\|Ga0318568_10384804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	874	Open in IMG/M
3300031833\|Ga0310917_10923982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	587	Open in IMG/M
3300031845\|Ga0318511_10610407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300031859\|Ga0318527_10388912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	594	Open in IMG/M
3300031879\|Ga0306919_10919297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300031880\|Ga0318544_10015275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2499	Open in IMG/M
3300031890\|Ga0306925_10224071	All Organisms → cellular organisms → Bacteria → Proteobacteria	2028	Open in IMG/M
3300031890\|Ga0306925_10671200	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300031893\|Ga0318536_10168482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1114	Open in IMG/M
3300031893\|Ga0318536_10508306	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300031893\|Ga0318536_10637503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300031894\|Ga0318522_10011100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2720	Open in IMG/M
3300031896\|Ga0318551_10805751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	546	Open in IMG/M
3300031897\|Ga0318520_10989548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300031910\|Ga0306923_10844869	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300031910\|Ga0306923_11324053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300031910\|Ga0306923_11736595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	643	Open in IMG/M
3300031912\|Ga0306921_10133534	All Organisms → cellular organisms → Bacteria → Proteobacteria	2898	Open in IMG/M
3300031912\|Ga0306921_11462713	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300031912\|Ga0306921_11942561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300031942\|Ga0310916_10354495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300031945\|Ga0310913_10534608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300031954\|Ga0306926_10792461	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300031954\|Ga0306926_11291815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300031959\|Ga0318530_10060856	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300031959\|Ga0318530_10307251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300031962\|Ga0307479_11886376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300032039\|Ga0318559_10166097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300032041\|Ga0318549_10580192	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300032043\|Ga0318556_10104829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1435	Open in IMG/M
3300032051\|Ga0318532_10177279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	757	Open in IMG/M
3300032051\|Ga0318532_10247517	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300032051\|Ga0318532_10288820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300032052\|Ga0318506_10100873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1233	Open in IMG/M
3300032055\|Ga0318575_10631373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300032068\|Ga0318553_10075050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1699	Open in IMG/M
3300032068\|Ga0318553_10222805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	984	Open in IMG/M
3300032205\|Ga0307472_100619916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	958	Open in IMG/M
3300032261\|Ga0306920_100408482	All Organisms → cellular organisms → Bacteria → Proteobacteria	2019	Open in IMG/M
3300032421\|Ga0310812_10514460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300033289\|Ga0310914_10987768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300033289\|Ga0310914_11235595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.86%
Host-Associated	Host-Associated	4.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.48%
Plants	Host-Associated → Plants	4.14%
Aquatic	Environmental → Aquatic	1.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.38%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.90%
Loam	Environmental → Terrestrial → Soil → Loam	6.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007822	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-8-2 Soapdenovo	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_130864641	3300000789	Soil	FIPLGEYWQASAYRKDLTDVIPGCFTTFYGVRRA*
JGI1027J12803_1093424585	3300000955	Soil	FIPLGEYWQASAYRKDLTDIIPGCFTTFYAVRRS*
Ga0062384_1005421883	3300004082	Bog Forest Soil	KQLWEDVPFIPMGEYWQATAYRKDLTDVPPGCFAVFYGVRRT*
Ga0070698_1019814952	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	QKRLWEDVPFIPLGEYWQASAYRKDLTDIIPGCFTTFYGVRRA*
Ga0070698_1020065741	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LWQDVPYIPMGEYWQATAYRKDLLDVQPGCFAVFYGVRRA*
Ga0070665_1017494302	3300005548	Switchgrass Rhizosphere	PFIPMGEYWQTTAYRKDITGAIPGCFTVFYNVKRA*
Ga0066661_105185782	3300005554	Soil	CIELQKRLWEDVPFIPLGEYWQASAYRKDLTDVIPGCFTTFYGVRRT*
Ga0066703_106238773	3300005568	Soil	PFIPMGEYWQATAYRKDLTDVLPGCFAVFYGVRRA*
Ga0066705_109441272	3300005569	Soil	PFIPMGEYWQASADRKDITDVIPCCFTTFYGARCPGH*
Ga0066708_105922451	3300005576	Soil	PFIPMGEYWQASAYRKDLTNVLPGCFAVFYAVRRA*
Ga0070763_100778632	3300005610	Soil	VPFIPMGEYWQASAYRKDLTDVLPGCFAVFYGVRRA*
Ga0068856_1006847222	3300005614	Corn Rhizosphere	LWEDVPFIPLGEYWQASAYRKDLIDVIPGCFTTLYGVRRA*
Ga0068864_1015255341	3300005618	Switchgrass Rhizosphere	QKRLWEDVPFIPLGEYWQASAYRKDVTDVIPGCFATFYGVRRA*
Ga0075023_1005653882	3300006041	Watersheds	VPYIPMGEYWQSTAYRKDLLDVLPGCFAVFWGIRRA*
Ga0070765_1003913752	3300006176	Soil	RLWEDVPFIPLGEYWQASAYRKDLTDVIPGCFTTFYGVRRA*
Ga0066665_116983411	3300006796	Soil	PFIPMGEYWQTTAYRKGLTGIIPGCFTMFYNVKRA*
Ga0075425_1018219373	3300006854	Populus Rhizosphere	FIPMGEYWQATAYSKHLTDVLPGCFAVFYGVRRA*
Ga0104325_1009961	3300007822	Soil	PFIPMGEYWQTTAYRKGLTGIIPGCFTVFWGVRRA*
Ga0099792_100280874	3300009143	Vadose Zone Soil	PFIPMGEYWQTTAYRKELSGIIPGCFTVFWGVKRA*
Ga0126382_104314383	3300010047	Tropical Forest Soil	MQVWQDVPFIPMGEYWQCTAFRKELTGIIPGCFAVFYNINRA*
Ga0126373_104663872	3300010048	Tropical Forest Soil	VPFIPTGEYWQATAYRKNLTDILPGSFAVFHGVRRA*
Ga0126373_106363642	3300010048	Tropical Forest Soil	LQKQLWEDVPFIPMGEYWQASAYRKRLTDILPSRFATFYRARPA*
Ga0126373_119603501	3300010048	Tropical Forest Soil	YIPMGEDSQSTDYREDLLDVLPGCFSEFWGIRRA*
Ga0126373_119607341	3300010048	Tropical Forest Soil	DVPYIPMGEYSQATAYRKDLLDVLPGCFAVFYGVRRA*
Ga0126373_119945682	3300010048	Tropical Forest Soil	PYIPMGEYWQSTAYRKDLLDVVPGCFAVFWRVRRA*
Ga0134067_102360431	3300010321	Grasslands Soil	QLWEDVTFIPLGEYWQATAYRKDLTDVLPGCFTVFYGVRRA*
Ga0134086_102752401	3300010323	Grasslands Soil	VPFIPMGEYWQATAYRKHLTDVLPGCFAVFYGVRRA*
Ga0126376_119256202	3300010359	Tropical Forest Soil	PFIPLGEYWQATAYRKRLTDIVPGCFATFYGVRPA*
Ga0126378_100468121	3300010361	Tropical Forest Soil	QLWTDVPFIPMGEYWQATAYRKDLTDVLPGCFATSYGVRRA*
Ga0126379_118113371	3300010366	Tropical Forest Soil	DVPYIPMGEYWQSSAYRKDLLDVLPGCFAVFYGVRRG*
Ga0126381_1020903331	3300010376	Tropical Forest Soil	DLQKQLWEDVPFIPMGEYWQASAYRKRLTDILHGCFATFYGVRPA*
Ga0126381_1038671032	3300010376	Tropical Forest Soil	MQRQVWEDVPFIPMGEYWQTTAYRKDLVDVLPGCFVTFYGVRRT*
Ga0126383_117857012	3300010398	Tropical Forest Soil	PYIPMGEYWQCTAYRKDLVDVLAGCFTVFWGIRRA*
Ga0126383_118811773	3300010398	Tropical Forest Soil	VPFIPTGEYWQATAYRKNLTDILPGSFAVFHGVRRA
Ga0137391_104886302	3300011270	Vadose Zone Soil	VPYIPMGEYWQSTAYRKDLLDVLPGCFAVFYGVRRA*
Ga0137363_108370442	3300012202	Vadose Zone Soil	DLPFIPMGEYWQTTAYRKELSGIIPGCFTVFWGVKRA*
Ga0137362_107739131	3300012205	Vadose Zone Soil	MQLWQDVPYIPMGEYWQATAYRKDLLDVTPGCFAVFYGVHR
Ga0137372_111651062	3300012350	Vadose Zone Soil	YIPMGEYWQSTAYRKDLLDVLPGCFAVFYGVRRA*
Ga0137407_119490061	3300012930	Vadose Zone Soil	DVPFIPMGEYWQTTAYRKDLTGILPGCFTVFYGVRRA*
Ga0126375_115870412	3300012948	Tropical Forest Soil	PFIPIGEYWQTTAYRKDLTGINPGCFTVFWGVRRA*
Ga0164299_116249451	3300012958	Soil	MQVWQDLPFIPMGEYWQTTAYRKELSGIIPGCFTVFWGVQRA*
Ga0132255_1010141912	3300015374	Arabidopsis Rhizosphere	CADLQKRLWEDVPFIPMGEYWQASAYRKHLTDIVPGCFTTFYGVRRS*
Ga0182036_112802471	3300016270	Soil	PFIPMGEYWQATAHRKDLTDVLSGCFATFYGVRRA
Ga0182036_117623172	3300016270	Soil	VPFIPTGEYWRATAYRKNLTDILPGCFAVSHGVRRA
Ga0182033_101781402	3300016319	Soil	VPYIPMGEYWQSTAYRKDLLDVQPGCFAVVWGIRRA
Ga0182035_111585112	3300016341	Soil	VHPMGEYWQVTAYHKDLLDVQRGCFAVFYGVRRGERHPC
Ga0182032_111257131	3300016357	Soil	PYIPMGEYWQSTAYRRDLLDVLPGCFAVFWGIRRA
Ga0182040_106399872	3300016387	Soil	PYIPMGEYWQSSAYRKDLIDVFPGCFSVFWGIRRA
Ga0182037_104354882	3300016404	Soil	QDVPYIPMGEYWQSSAYRKDLINVFPGCFSVFWGIRRA
Ga0182038_108498882	3300016445	Soil	MQVWQDVRFILMDEYWQTTGKRLSGIIPGCFMVFY
Ga0182038_117587461	3300016445	Soil	PYIPMGEYWQSTAYRKDLLDVLPGCFAVFYGVRRA
Ga0187772_112342642	3300018085	Tropical Peatland	VPFIPMGEYWQASAYRKRLTDILPGCFATFYGVRPA
Ga0066662_119515811	3300018468	Grasslands Soil	MQTRRRDLRQDLPFVPMGAYRQTTAYRNDLKGVIPGCFTVFYGVERA
Ga0066662_125796641	3300018468	Grasslands Soil	RLWEDVPFIPLGEYWQASAYRKDLTDIVPGCFTTFYGVRRA
Ga0066669_106554182	3300018482	Grasslands Soil	WEDVPFIPLGEYWQASAYRKDLTDIIPGCFTTFYGVRRA
Ga0210403_106668952	3300020580	Soil	PYIPMGEYWQSTAYRKDLLDVMPGCFAVFYGVRRS
Ga0210408_101230281	3300021178	Soil	VPFIPMGEYWQATAYRKDLTDVLPGCFAMFYGVRRT
Ga0210408_107232611	3300021178	Soil	DVPYIPMGEYWQSTAYRKDIVDVLPGCFAVFYGIHRCHRYLH
Ga0210397_101463381	3300021403	Soil	ICEELQKQLWQDVPFIPLGEYWQASAYRKRLVDIIPGCFATSYGVRPA
Ga0210383_110434312	3300021407	Soil	TADPELQKQLWQDVPFIPLGEYWQASAYRKRLVDIIPGCFATFYGVRPA
Ga0182009_101961801	3300021445	Soil	VPFIPLGEYWQASAYRKDVTDVIPGCFATFYGVRRA
Ga0210402_113714941	3300021478	Soil	MQLWQDVPYIPMGEYWQSTAFRKDIVGVQPGCFSVFDGVRRA
Ga0242660_10680052	3300022531	Soil	QDVPFIPMGEYWQTTGYRKGLTGIIPGCFTVFYNVKRA
Ga0207664_105193693	3300025929	Agricultural Soil	WEDVPFIPLGEYWQASAYRKDVTDVIPGCFATFYGVRRA
Ga0207665_106406382	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MQLWQDVPYIPMGEYWQSTAYRKDLLDVQPGCFAVFWGLPSR
Ga0207676_101838601	3300026095	Switchgrass Rhizosphere	QKRLWEDVPFIPLGEYWQASAYRKDVTDVIPGCFATFYGVRRA
Ga0209688_10375913	3300026305	Soil	LQKQLWHDVPFIPLGEYWQASAYRKHLVDIIPGCFATFYGVRPA
Ga0209213_10985432	3300027383	Forest Soil	MQKRLWEDVPFIPLGEYWQASAYRKDLTDVIPGCFTTFYGVRRA
Ga0209528_11518091	3300027610	Forest Soil	QDLPFIPMGEYWQTTAYRKELTGILPGCFTVFWGVQRA
Ga0209625_10013915	3300027635	Forest Soil	PFIPMGEYWQTTAYRKGLTGIIPGCFTVFYNVKRA
Ga0209217_10722542	3300027651	Forest Soil	VPYIPMGEYWQSTAYRKDLLDVLPGCFAVFYGVRRA
Ga0209168_103831412	3300027986	Surface Soil	QTRLWEDVPFIPLGEYWQASAYRKDLIDIIPGCFATFYGVRRA
Ga0318516_102905401	3300031543	Soil	QDVPYIPMGEYWQSTAYRKDLLDVLPGCFAVFWGIHRA
Ga0318534_105748552	3300031544	Soil	QLWQDVPYIPMGEYWQATAYRKDLLDVQPGCFKVFYGVRRA
Ga0318541_100040305	3300031545	Soil	VAGVPYIPMGEYWQSTAYRKDLLDVLSGCFAVFWGIRRA
Ga0318541_101892503	3300031545	Soil	LWQDVPYIRMGEYWQSTAYRKDLLDVLPGCFAVFYGVRRA
Ga0318541_107274582	3300031545	Soil	YIPMGEYWQSTAYRKDLLGVIPGCFAVFWGIRPAS
Ga0318571_100752471	3300031549	Soil	PYIPMGEYWQSTAYRKDLLDVLPGCFAVFWGIHRA
Ga0318528_103275031	3300031561	Soil	VPYIPMGEYWQSTAYRKDLLDVLPGCFAVFYGVRRG
Ga0318515_103831471	3300031572	Soil	WQDVPFIPMGEYWQSTAYRKGLTGIIPDCFTVFYNVKRA
Ga0318515_105120871	3300031572	Soil	WKDVPYIPMGEYWQSTAYRKDLLDVLPGCFAVFYRVRRG
Ga0318515_105616001	3300031572	Soil	VPYIPMGEYWQSSAYRKDLINVFPGCFSVFWGIRRA
Ga0310915_102220541	3300031573	Soil	DVPYIPMGEYWQSTAYRKDMLDVQPGCFAVFWGIRRAP
Ga0310915_103306773	3300031573	Soil	VPYIPMGEYWQSTAYRKDLLDVLPGCLAVFWGIRRA
Ga0310915_109657282	3300031573	Soil	QLWEDVPYIRMGEYWQSTAYRKDLLDVLPGCFAVFWGIRRA
Ga0318555_102342892	3300031640	Soil	DVPYIPMGEYWQSTAYRKDLLDVRPGCFAVFWGIRRA
Ga0318561_107004311	3300031679	Soil	PYIPMGEYWQSTAYRKDLLDVLPGCFPVFWGIRRA
Ga0318572_109321512	3300031681	Soil	PYIPMGEYYQSSAYRKDLLDVLPGCFAVFWGIRRA
Ga0318496_108128901	3300031713	Soil	VPYIPMGEYWQSTAYRKDLLDVLPGCFAVFWGIRPAS
Ga0306917_105674451	3300031719	Soil	WEDVPFIPMGEYWQATAYRRRLTDIVPDCFATFYGVRPA
Ga0318493_103064111	3300031723	Soil	PYIPMGEYWQSTAYRKDLLDVLPGCFAVFWGIRRA
Ga0318501_103085011	3300031736	Soil	VPFIPMGEYWQTTAYRKGLTGIIPGCFTVFYNVKRA
Ga0318494_106159801	3300031751	Soil	VELQMQLWQELPYIPMGEYWQFTAYRKDLLDVLPGCFAV
Ga0318554_102544341	3300031765	Soil	PYIPMGEYWQSTAYRKDLLDVQPGCFAVFYGVRRV
Ga0318509_106846322	3300031768	Soil	PYIPMGEYWQSTAYRNDLLDVLPGCLAVFWGIRRG
Ga0318521_103885112	3300031770	Soil	QLWRDVPYIPMGEYWQSTAYRKDLLDVLPGCFAVFYGVRRA
Ga0318543_103604441	3300031777	Soil	QDVPYIPMGEYWQSTAYRKDLLDVVPGCFATFYGVRRA
Ga0318508_10776572	3300031780	Soil	DVPYIPMGEYWQSTAYRKDLLDVLPGCFSVFWGIRHA
Ga0318548_105321702	3300031793	Soil	DVPYIPMGEYWQSTAYRKGLLDVLPGCFPVFWGIRRV
Ga0318557_105954111	3300031795	Soil	DVPYIPMGEYWQSTAYRKDLLEVLPGCFAVFWGIRRA
Ga0318550_102193432	3300031797	Soil	PYIPMGEYWQSTAYRKDLLDVLPGCFAVFYGVHRA
Ga0318550_105265842	3300031797	Soil	PFIPMGEYWQATAYRRRLTDIVPGCFATFYGVRAA
Ga0318523_100155516	3300031798	Soil	VPYIPMGEYWQSTAYRKDLIDVLPGCFATFYGVRRA
Ga0318568_103848041	3300031819	Soil	WKDVPYIPMGEYWQSTAYRKDLLDVLPGCFAVFYGVRRG
Ga0310917_109239822	3300031833	Soil	VPFIPMGEYWQATAHRKDLTDVLSGCFATFYGVRRA
Ga0318511_106104071	3300031845	Soil	QDVPYIPMGEYWQSIAYRKDLLDVLPGCFAVFWGIRRA
Ga0318527_103889121	3300031859	Soil	PFIPMGESWQATAYRKGLTGIIPGCFTVFYNVKRA
Ga0306919_109192972	3300031879	Soil	QDVPYIPMGEYWQSIAYRKDLLDVLPGCFAVFWGIRRE
Ga0318544_100152754	3300031880	Soil	VPFIPMGESWQATAYRKGLSGIIPGCFTVFYNVKRA
Ga0306925_102240713	3300031890	Soil	PYIPMGEYWQSTAYRKDLLDVLPGCFSVFWGIRRA
Ga0306925_106712001	3300031890	Soil	VPFIPMGESWQATAYRKGLTGIIPGCFTVFYNVKRA
Ga0318536_101684822	3300031893	Soil	DVPYIPMGEYWQATAYRKDLLDVLPGCFAVFYGVRRA
Ga0318536_105083061	3300031893	Soil	VPYVPMGEYWQSTAFRKDLLDVLPGCFPVFWGIRRA
Ga0318536_106375032	3300031893	Soil	VPYIPMGEYWQATAYRKDLLDVQPGCFAAFYGVRKA
Ga0318522_100111001	3300031894	Soil	VPYIPMGEYWQATAYRKDLLDVLPGCFAVFYGVRRA
Ga0318551_108057511	3300031896	Soil	VWQDVPFIPMGEYWQSTAYRKGLTGIIPDCFTVFYNVKRA
Ga0318520_109895483	3300031897	Soil	SGNVPFIPMGEYRQATAYRKHLTDIVPGCFATFYGVRMA
Ga0306923_108448693	3300031910	Soil	LWQDVPYIPTGEYRQSTAYRKDLLDVLPGCFATFYGVRRT
Ga0306923_113240531	3300031910	Soil	DVPYIPLGEYWQSTAYRKDLLDVLPGYFAVFYGVRRG
Ga0306923_117365951	3300031910	Soil	DVPYIPMGEYWQSTAYRKDLLDVLPGCFAVFWGIRRA
Ga0306921_101335343	3300031912	Soil	MGEYWQVTAYHKDLLDVQRGCFAVFYGVRRGERHPC
Ga0306921_114627132	3300031912	Soil	LWQDVRYIPMGEFWQSTAYRKDLLDVLPGCFAVFWGIRRA
Ga0306921_119425612	3300031912	Soil	QDVPYIPMGEYWQATAYRKDLLDVQPGCFAVFYGVRKA
Ga0310916_103544952	3300031942	Soil	QDVPYIPMGEYWQSTAYRKDMLDVQPGCFAVFWGIRRAP
Ga0310913_105346081	3300031945	Soil	VPYIPMGEYWQSTAYRKDLLDVLPGCFAVFWGIRRA
Ga0306926_107924611	3300031954	Soil	QDVPFIPMGEYWQSTAYRKELTGIVPGCFAVFYNVSRA
Ga0306926_112918151	3300031954	Soil	VPLIPMGEYWQATAYRKDLVDVLPGCFAVFYGVRRV
Ga0318530_100608563	3300031959	Soil	PYIPMGEYWQSTAYRKDLIDVLPGCFATFYGVRRA
Ga0318530_103072512	3300031959	Soil	MQLWQELPYIPMGEYWQFTAYRKDLLDVLPGCFAV
Ga0307479_118863762	3300031962	Hardwood Forest Soil	VPFIPMGEYWQATAYRKDLTDVLPGCFAVFYGVRRV
Ga0318559_101660972	3300032039	Soil	QDVPYIPMGEYWQSTAYRKDLLEVLPGCFAVFWGIRRA
Ga0318549_105801921	3300032041	Soil	DVPFIPMGESWQATAYRKGLTGIIPGCFTVFYNVKRA
Ga0318556_101048291	3300032043	Soil	VPYIPMGEYWQSTAYRRDLLDVLPGCFAVFWGIRRA
Ga0318532_101772792	3300032051	Soil	PYIPMGEYWQSTAYRKDLVDVLPGCFAVFWGIRRA
Ga0318532_102475172	3300032051	Soil	QLWQDLPYIPMGEYWQSTAYRKDLLDVQPGCFAVFYGVRRA
Ga0318532_102888202	3300032051	Soil	LWQDLPYIPMGEYWQSTAYRKDLLDVQPGCFAVFYGVRRV
Ga0318506_101008733	3300032052	Soil	LWQDVPCIPMGEYWQSTAYRKDLLDVLPGCFAVFWGIRRA
Ga0318575_106313731	3300032055	Soil	PFIPMGESWQATAYRKGLSGIIPGCFTVFYNVKRA
Ga0318553_100750502	3300032068	Soil	PYIPMGEYWQSTAYRKDLLDVLPGCFAVFWGIRRV
Ga0318553_102228051	3300032068	Soil	DVPFIPMGESWQATAYRKGLSGIIPGCFTVFYNVKRA
Ga0307472_1006199162	3300032205	Hardwood Forest Soil	WQDVPFIPIGEYWQTTAYRKGLTGIIPGCFTVFYNVKRA
Ga0306920_1004084821	3300032261	Soil	VPFIPMGEYRQATAYRKHLTDIVPGCFATFYGVRMA
Ga0310812_105144601	3300032421	Soil	WQDLPFIPMGEYWQTTAYRKELSGIIPGCFTVFWGVQRA
Ga0310914_109877681	3300033289	Soil	MRVWQDVPYIPMAEYWQSTAYRKDVLDVMPACFAVFY
Ga0310914_112355952	3300033289	Soil	MQLWQDVPYIPMGEYSQATAYRKDLLDVLPGCFAVFYG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050502

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences