Metagenome / Metatranscriptome Family F050488

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F050488
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	70 residues
Representative Sequence	VAEDSWNAHIGYLEDEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK
Number of Associated Samples	107
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.79 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	64.83 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.034 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (23.448 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.862 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.21% β-sheet: 0.00% Coil/Unstructured: 35.79%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.238.1.2: Arfaptin, Rac-binding fragment	d1i4ta_	1i4t	0.88147
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.87205
a.47.1.1: STAT	d1bg1a1	1bg1	0.86728
f.13.1.0: automated matches	d7crja_	7crj	0.86719
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.86582

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF16360	GTP-bdg_M	6.94
PF04366	Ysc84	4.17
PF00580	UvrD-helicase	3.47
PF00196	GerE	3.47
PF12697	Abhydrolase_6	2.78
PF00483	NTP_transferase	2.78
PF00719	Pyrophosphatase	2.08
PF00118	Cpn60_TCP1	2.08
PF00990	GGDEF	1.39
PF05292	MCD	1.39
PF02353	CMAS	1.39
PF13361	UvrD_C	1.39
PF01926	MMR_HSR1	1.39
PF00011	HSP20	1.39
PF11154	DUF2934	0.69
PF14559	TPR_19	0.69
PF01717	Meth_synt_2	0.69
PF02780	Transketolase_C	0.69
PF02803	Thiolase_C	0.69
PF00076	RRM_1	0.69
PF00691	OmpA	0.69
PF04679	DNA_ligase_A_C	0.69
PF02817	E3_binding	0.69
PF01139	RtcB	0.69
PF07690	MFS_1	0.69
PF13442	Cytochrome_CBB3	0.69
PF01592	NifU_N	0.69
PF01182	Glucosamine_iso	0.69
PF01380	SIS	0.69
PF04191	PEMT	0.69
PF02371	Transposase_20	0.69
PF03729	DUF308	0.69
PF02652	Lactate_perm	0.69
PF02922	CBM_48	0.69
PF02775	TPP_enzyme_C	0.69
PF01951	Archease	0.69
PF00571	CBS	0.69
PF13276	HTH_21	0.69
PF04055	Radical_SAM	0.69
PF00534	Glycos_transf_1	0.69
PF12344	UvrB	0.69
PF13561	adh_short_C2	0.69
PF01436	NHL	0.69
PF00092	VWA	0.69
PF01541	GIY-YIG	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	4.17
COG3973	DNA helicase IV	Replication, recombination and repair [L]	3.47
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	3.47
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	3.47
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	2.08
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	2.08
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	1.39
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.39
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	1.39
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.39
COG1371	Archease, activates RNA ligation by RtcB (tRNA splicing)	Translation, ribosomal structure and biogenesis [J]	0.69
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.69
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.69
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.69
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.69
COG1620	L-lactate permease	Energy production and conversion [C]	0.69
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.69
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.69
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	0.69
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.72 %
Unclassified	root	N/A	8.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.72 %
Unclassified	root	N/A	8.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.03 %
Unclassified	root	N/A	8.28 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.31 %
Unclassified	root	N/A	8.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.90 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	44.83 %
Unclassified	root	N/A	8.28 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.38 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.83 %
Unclassified	root	N/A	8.28 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.38 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.69 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.83 %
Unclassified	root	N/A	8.28 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.38 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %
Fervidicoccales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Fervidicoccales	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.83 %
Unclassified	root	N/A	8.28 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.38 %
Fervidicoccaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Fervidicoccales → Fervidicoccaceae	0.69 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.83 %
Unclassified	root	N/A	8.28 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.69 %
Fervidicoccus	genus	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Fervidicoccales → Fervidicoccaceae → Fervidicoccus	0.69 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.83 %
Unclassified	root	N/A	8.28 %
Fervidicoccus fontis	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Fervidicoccales → Fervidicoccaceae → Fervidicoccus → Fervidicoccus fontis	0.69 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.69 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10080902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1536	Open in IMG/M
3300001356\|JGI12269J14319_10002032	All Organisms → cellular organisms → Bacteria	19805	Open in IMG/M
3300001356\|JGI12269J14319_10050219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2493	Open in IMG/M
3300001593\|JGI12635J15846_10396096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300005167\|Ga0066672_10357821	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005174\|Ga0066680_10045429	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300005178\|Ga0066688_10021020	All Organisms → cellular organisms → Bacteria	3461	Open in IMG/M
3300005187\|Ga0066675_10045223	All Organisms → cellular organisms → Bacteria	2679	Open in IMG/M
3300005450\|Ga0066682_10006528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5789	Open in IMG/M
3300005529\|Ga0070741_10985944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300005531\|Ga0070738_10001165	All Organisms → cellular organisms → Bacteria	58193	Open in IMG/M
3300005533\|Ga0070734_10013103	All Organisms → cellular organisms → Bacteria	5885	Open in IMG/M
3300005534\|Ga0070735_10003830	All Organisms → cellular organisms → Bacteria	12982	Open in IMG/M
3300005534\|Ga0070735_10003830	All Organisms → cellular organisms → Bacteria	12982	Open in IMG/M
3300005534\|Ga0070735_10138260	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005534\|Ga0070735_10709865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300005534\|Ga0070735_10876708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300005538\|Ga0070731_10064480	All Organisms → cellular organisms → Bacteria → Acidobacteria	2433	Open in IMG/M
3300005538\|Ga0070731_10077222	Not Available	2209	Open in IMG/M
3300005538\|Ga0070731_10363838	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300005555\|Ga0066692_10039317	All Organisms → cellular organisms → Bacteria → Acidobacteria	2564	Open in IMG/M
3300005836\|Ga0074470_10029609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300005921\|Ga0070766_10501157	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300006050\|Ga0075028_100007989	All Organisms → cellular organisms → Bacteria → Proteobacteria	4250	Open in IMG/M
3300006176\|Ga0070765_102127829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300006358\|Ga0068871_100864825	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Fervidicoccales → Fervidicoccaceae → Fervidicoccus → Fervidicoccus fontis	836	Open in IMG/M
3300006638\|Ga0075522_10037073	All Organisms → cellular organisms → Bacteria → Acidobacteria	2910	Open in IMG/M
3300006755\|Ga0079222_10112590	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300006796\|Ga0066665_10694147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300009520\|Ga0116214_1051748	All Organisms → cellular organisms → Bacteria → Acidobacteria	1489	Open in IMG/M
3300009525\|Ga0116220_10281190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300009672\|Ga0116215_1061884	Not Available	1691	Open in IMG/M
3300009698\|Ga0116216_10334882	All Organisms → cellular organisms → Bacteria → Acidobacteria	921	Open in IMG/M
3300009700\|Ga0116217_10043313	Not Available	3322	Open in IMG/M
3300010333\|Ga0134080_10078720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1332	Open in IMG/M
3300010379\|Ga0136449_100114168	All Organisms → cellular organisms → Bacteria → Proteobacteria	5465	Open in IMG/M
3300010379\|Ga0136449_102211909	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300010379\|Ga0136449_102864108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300010379\|Ga0136449_103217244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300010397\|Ga0134124_10764143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300010400\|Ga0134122_11698082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010401\|Ga0134121_12517255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300011120\|Ga0150983_13418239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300011120\|Ga0150983_14856013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300011120\|Ga0150983_15374963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300011269\|Ga0137392_10665485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300012199\|Ga0137383_10146940	All Organisms → cellular organisms → Bacteria → Acidobacteria	1725	Open in IMG/M
3300012205\|Ga0137362_10379678	Not Available	1224	Open in IMG/M
3300012211\|Ga0137377_11813249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012359\|Ga0137385_10030235	All Organisms → cellular organisms → Bacteria	4853	Open in IMG/M
3300012362\|Ga0137361_10005847	All Organisms → cellular organisms → Bacteria → Acidobacteria	8343	Open in IMG/M
3300012917\|Ga0137395_10864708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300012927\|Ga0137416_10137388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1895	Open in IMG/M
3300013296\|Ga0157374_10052937	All Organisms → cellular organisms → Bacteria	3782	Open in IMG/M
3300014495\|Ga0182015_10637336	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300014501\|Ga0182024_10013309	All Organisms → cellular organisms → Bacteria	16087	Open in IMG/M
3300014501\|Ga0182024_10069836	All Organisms → cellular organisms → Bacteria → Acidobacteria	5329	Open in IMG/M
3300014501\|Ga0182024_12967306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300017821\|Ga0187812_1289052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300017823\|Ga0187818_10039729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2020	Open in IMG/M
3300017823\|Ga0187818_10272346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300017823\|Ga0187818_10436677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300017924\|Ga0187820_1024916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1526	Open in IMG/M
3300017926\|Ga0187807_1171654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300017927\|Ga0187824_10002780	All Organisms → cellular organisms → Bacteria → Acidobacteria	4666	Open in IMG/M
3300017927\|Ga0187824_10052159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1262	Open in IMG/M
3300017927\|Ga0187824_10053929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300017928\|Ga0187806_1072805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300017930\|Ga0187825_10025711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1982	Open in IMG/M
3300017930\|Ga0187825_10121995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300017933\|Ga0187801_10194968	Not Available	801	Open in IMG/M
3300017936\|Ga0187821_10001680	All Organisms → cellular organisms → Bacteria	6861	Open in IMG/M
3300017936\|Ga0187821_10007601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3665	Open in IMG/M
3300017936\|Ga0187821_10009309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3342	Open in IMG/M
3300017936\|Ga0187821_10071882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300017942\|Ga0187808_10020959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2645	Open in IMG/M
3300017943\|Ga0187819_10068771	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300017943\|Ga0187819_10353604	Not Available	849	Open in IMG/M
3300017955\|Ga0187817_10109793	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300017955\|Ga0187817_10538980	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300017993\|Ga0187823_10210780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300017994\|Ga0187822_10027015	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300017995\|Ga0187816_10438943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300018001\|Ga0187815_10033620	All Organisms → cellular organisms → Bacteria	2172	Open in IMG/M
3300018006\|Ga0187804_10150037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300018007\|Ga0187805_10369005	Not Available	664	Open in IMG/M
3300018012\|Ga0187810_10062148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1423	Open in IMG/M
3300018433\|Ga0066667_10032571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2951	Open in IMG/M
3300021170\|Ga0210400_10754959	Not Available	798	Open in IMG/M
3300021401\|Ga0210393_10735244	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300021407\|Ga0210383_10145110	Not Available	2015	Open in IMG/M
3300021420\|Ga0210394_10055586	All Organisms → cellular organisms → Bacteria	3452	Open in IMG/M
3300021420\|Ga0210394_10134435	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300021420\|Ga0210394_10144288	All Organisms → cellular organisms → Bacteria → Acidobacteria	2066	Open in IMG/M
3300021420\|Ga0210394_10237356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1595	Open in IMG/M
3300021420\|Ga0210394_10412850	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300025289\|Ga0209002_10134268	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300025327\|Ga0209751_10682851	Not Available	815	Open in IMG/M
3300025862\|Ga0209483_1030094	All Organisms → cellular organisms → Bacteria → Acidobacteria	2694	Open in IMG/M
3300025900\|Ga0207710_10097564	All Organisms → cellular organisms → Bacteria → Acidobacteria	1383	Open in IMG/M
3300026310\|Ga0209239_1125905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300026317\|Ga0209154_1015441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3636	Open in IMG/M
3300026329\|Ga0209375_1029303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2999	Open in IMG/M
3300026334\|Ga0209377_1131587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300026538\|Ga0209056_10348960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300027071\|Ga0209214_1014935	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300027570\|Ga0208043_1149688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300027641\|Ga0208827_1059984	All Organisms → cellular organisms → Bacteria → Acidobacteria	1239	Open in IMG/M
3300027660\|Ga0209736_1013816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2552	Open in IMG/M
3300027696\|Ga0208696_1077602	All Organisms → cellular organisms → Bacteria → Acidobacteria	1124	Open in IMG/M
3300027826\|Ga0209060_10113232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300027854\|Ga0209517_10026372	All Organisms → cellular organisms → Bacteria → Acidobacteria	5072	Open in IMG/M
3300027869\|Ga0209579_10243229	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300027869\|Ga0209579_10435901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300027869\|Ga0209579_10470568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300027889\|Ga0209380_10643619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300027894\|Ga0209068_10010931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4304	Open in IMG/M
3300027905\|Ga0209415_10029662	All Organisms → cellular organisms → Bacteria	7942	Open in IMG/M
3300027905\|Ga0209415_10096485	All Organisms → cellular organisms → Bacteria	3276	Open in IMG/M
3300027910\|Ga0209583_10702824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300027915\|Ga0209069_10777314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300027965\|Ga0209062_1001036	All Organisms → cellular organisms → Bacteria	58207	Open in IMG/M
3300027986\|Ga0209168_10037154	All Organisms → cellular organisms → Bacteria	2658	Open in IMG/M
3300027986\|Ga0209168_10055354	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300027986\|Ga0209168_10076385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1751	Open in IMG/M
3300027986\|Ga0209168_10451374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300028536\|Ga0137415_10177975	All Organisms → cellular organisms → Bacteria → Acidobacteria	1953	Open in IMG/M
3300028800\|Ga0265338_10579376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300028906\|Ga0308309_11542460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300029999\|Ga0311339_11552230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300030659\|Ga0316363_10015626	All Organisms → cellular organisms → Bacteria → Proteobacteria	4302	Open in IMG/M
3300030848\|Ga0075388_11317665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300031128\|Ga0170823_13532919	All Organisms → cellular organisms → Bacteria → Proteobacteria	2047	Open in IMG/M
3300031234\|Ga0302325_10048032	All Organisms → cellular organisms → Bacteria	8529	Open in IMG/M
3300031234\|Ga0302325_13303661	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300031525\|Ga0302326_10621348	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300031525\|Ga0302326_10723709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300031712\|Ga0265342_10376653	Not Available	736	Open in IMG/M
3300031715\|Ga0307476_10197915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1458	Open in IMG/M
3300031949\|Ga0214473_10131932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2912	Open in IMG/M
3300032770\|Ga0335085_12508214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300033004\|Ga0335084_10261676	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300033433\|Ga0326726_10029806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4754	Open in IMG/M
3300033433\|Ga0326726_10624287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300033433\|Ga0326726_11848252	Not Available	588	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.55%
Host-Associated	Host-Associated	3.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.10%
Aquatic	Environmental → Aquatic	23.45%
Plants	Host-Associated → Plants	3.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.59%
Freshwater	Environmental → Aquatic → Freshwater	20.00%
Peat	Environmental → Terrestrial → Peat	5.52%
Sediment	Environmental → Aquatic → Sediment	3.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.76%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.00%
Loam	Environmental → Terrestrial → Soil → Loam	7.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.38%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	20.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.69%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	20.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	13.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.14%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.07%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.07%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.07%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.38%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.69%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100809021	3300000567	Peatlands Soil	QVADDSWNAHIRYLEDEVKKIDERAGKLDKMIPGMKNEAKKHACRELVNGLRDEARQYRKYLALVKRFIQHE*
JGI12269J14319_100020329	3300001356	Peatlands Soil	VADDSWNAHIRYLEDEVKKIDERAGKLDILIPDMKNEAKKHACRELVNGLRDEARQYRKYLALVKRFIQHE*
JGI12269J14319_100502191	3300001356	Peatlands Soil	MGVNQVADDSWNAHIRYLEDEVKKIDERAGKLDKMIPGMKNEAKKHACRELVNGLRDEARQYRKYLA
JGI12635J15846_103960962	3300001593	Forest Soil	MAEDSWNAHIRYLEDEVKKLEERADKLENMIPDLESDEKIHALRELVNHLRDEARYHRKYLALVKQKQLTPSSERLSESDH*
Ga0066672_103578212	3300005167	Soil	MVWRHAARGQGNGVAEDSWNAHIGYLENEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK*
Ga0066680_100454291	3300005174	Soil	MAEDSWKAHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVSHLRDEVSEHLKYLALVRQK*
Ga0066688_100210201	3300005178	Soil	VAEDSWNAHIGYLENEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK*
Ga0066675_100452231	3300005187	Soil	QGNGVAEDSWNAHIGYLENEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK*
Ga0066682_1000652810	3300005450	Soil	VAEDSWNAHIGYLEDEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK*
Ga0070741_109859441	3300005529	Surface Soil	VAEDPWNAHIGYLEDEVKKLDGRAAELEATILDLENEQKKNALRECAKRLRDEASEHRKYLALVKQK*
Ga0070738_1000116551	3300005531	Surface Soil	VCGVAERSEGEGNRVVEDSWNTHIDYLEDEVKKIDERAGRLEVTIADLENEQKKHALRELVQHLRDAAKEHRKYLALVKRK*
Ga0070734_100131034	3300005533	Surface Soil	MNQTAHTSYLENEVKKLDERAGKLEEIIADLENGQKKHAFRELVNRLRGEASCHRKYLALVKQ*
Ga0070735_100038302	3300005534	Surface Soil	MAEDSWDAHISYLEDEVKKIDERADKLAEMIPALENEQKKNALRELVNHLRDGASYHRKYLALVKQK*
Ga0070735_1000383022	3300005534	Surface Soil	MAEDSWNAHISYLEDEVKKIDERADKLEEMIPGLENEQKKHALRELVNHLRDESSYHRKYLSLVKRK*
Ga0070735_101382601	3300005534	Surface Soil	MAEDSWNAHISYLEDEVKKIDERADKLEEMIPGLENEQRKRALRELVNHLRDEASYHRKFLALVKRK*
Ga0070735_107098652	3300005534	Surface Soil	MAEDSWNEHIGYLESEVKKIDERANRLEATIADLESEAKKQALRELVNRLRDEASEHRKYLALVKRK*
Ga0070735_108767082	3300005534	Surface Soil	MAEEPWNAHIAYLKDEVRKLGKQADKLEAMIPGTESEQRKHALRELVNHLRDEASEHRKYLALVKN
Ga0070731_100644803	3300005538	Surface Soil	MAEDAWNDHIGYLESEVKKIDERADKLEAMIADLESETKKDALRELVNRLRGEASEHRKYLALVKRK*
Ga0070731_100772222	3300005538	Surface Soil	MAQDSWNVHSGYLEDEVKKIDERADKLEEMISGPKNEQKKHALRELVNHLRDEASYHRKYLALVKRK*
Ga0070731_103638382	3300005538	Surface Soil	VHYELPVVCRVWCGGVEVRSGEGNEVAEDSWNAHIGYLEDEVKKIDARADKLEATIPDLEDEPKKHALRELVKRLRDEASEHRKYLALVKQK*
Ga0066692_100393172	3300005555	Soil	MAEDSWKAHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVKHLRDEASEQLKYLALVKQK*
Ga0074470_100296092	3300005836	Sediment (Intertidal)	MAEDPWKAHISYLEAEVEKMMERANKLEAMIPGLESDQKKHALRELVSHLRDDVSEHRKFLALVKQK*
Ga0070766_105011571	3300005921	Soil	EGEGNGVAEDSWNAHIGYLEDEVKKIDARADKLEATIPDLEDEPKKHALRELVKRLRDEASEHRKYLALVKQK*
Ga0075028_1000079893	3300006050	Watersheds	VADDARKAHIKYLEDEVKKIGERADKLEKMIPGLANEQRKHAFKELVNGLRDEASQYRKYLELVKRFIQHE*
Ga0070765_1021278292	3300006176	Soil	VAEDSWNAHIGYLEDEVKKIDARAGKLEATIPGLEDEPKKHALRELVKRLRDEASEHRKYLALVKQK*
Ga0068871_1008648251	3300006358	Miscanthus Rhizosphere	VADDSWNAHIKYLEDEVKKIEERAGKLEKMIPDLKNEPKKHACRKLINDLRDEANQHRKYLALVKRFIQHK*
Ga0075522_100370734	3300006638	Arctic Peat Soil	MADDSWTAHIAYLEDDVKKIAERVAKLEKMIPDLTNESRKHLCRKRIHDLRDQANEHRKYLALVKQFVHPG*
Ga0079222_101125901	3300006755	Agricultural Soil	VAEDSWNAHIGYLEDEVKKIDERADKLEATIPDLENEQKKHALREFVKHLRDEANEHRKYLALVKQK*
Ga0066665_106941472	3300006796	Soil	MVWRHAARGQGNGAAEDSWNAHIGYLENEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK*
Ga0116214_10517481	3300009520	Peatlands Soil	VADDSWNAHIRYLEDEVKKIDERTGKLDILIPDMKNEAKKHACRELVNGLRDEARQYRKYLALVKRFIQHE*
Ga0116220_102811902	3300009525	Peatlands Soil	VADDSWNAHIRYLEDEVKKIDERAGKLDKMIPGMKNEAKKHACRELVNGLRDEARQYRKYLALVKRFIQHE*
Ga0116215_10618842	3300009672	Peatlands Soil	MGVNQVADDSWNAHIRYLEDEVKKIDERAGKLDKMIPGMKNEAKKHACRELVNGLRDEARQYRKYLPLVKRFIQQE*
Ga0116216_103348822	3300009698	Peatlands Soil	DSWNAHIRYLEDEVKKIDERAGKLDKMIPGMKNEAKKHACRELVNGLRDEARQYRKYLALVKRFIQHE*
Ga0116217_100433133	3300009700	Peatlands Soil	VADDSWNAHIRYLEDEVKKIDERAGKLDILIPDMKNEAKKHACRELVNGLRDEARQYRKYLPLVKRFIQQE*
Ga0134080_100787203	3300010333	Grasslands Soil	MQRWEGNGVAEDSWNAHIGYLEDEVKKIDERADKLEAAIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK*
Ga0136449_1001141681	3300010379	Peatlands Soil	VADDSWNAHIRYLEDEVKKIDERAGKLDILIPDMKNEAKKHACRELVNGLRDEARQYRKY
Ga0136449_1022119093	3300010379	Peatlands Soil	YLEDEVKKIDERADKLEAIIPDLESEQKKHALREFVRHLRDETSEHRKCLALVKHT*
Ga0136449_1028641082	3300010379	Peatlands Soil	VAEDSWKAHIAYLEEEVKKTEERADRLEATIPDLESEQKKHALRNLVKHLREEANEHRKYLALMKQK*
Ga0136449_1032172441	3300010379	Peatlands Soil	VKWLVQRCAASWAGNGVAEGPWYARISYLEDEVKKIGERADKLEAMIPDLEDEQKKRALRELVNHLRDEASENRKYLALVKQK*
Ga0134124_107641431	3300010397	Terrestrial Soil	VADDSWNAHIKYLEDEVKKIEERAGKMEKMIPDLKNEPKKHACRKLINDLRDEANQHRKYLALVKRFIQHK*
Ga0134122_116980821	3300010400	Terrestrial Soil	MAEDPWKAHINYLEEEVKKIGERAEKLEAMIPDLESEQKKHALREIVRHLRDEVSEHRKFLALVKHK*
Ga0134121_125172551	3300010401	Terrestrial Soil	MVEGSLEAHIRYLEDEVKKISERADKLEAIIPSTENGQKKQALRELVSRLRDEVSEHRKYLRVMTPK*
Ga0150983_134182391	3300011120	Forest Soil	VCRAAGRVTREEGLNVPENSWSAHIAYLEDRVKKLDQRADRLETRIPGQENEQKKHASRELVKHLRDEASEHRKYLALVKP
Ga0150983_148560131	3300011120	Forest Soil	MAEWRYAARGEGNGVAEDSWNAHIGYLEDEVKKIDARADKLEATIPDLEDEPKKQALRELVKHLRDEASEHRKYLALVKHK*
Ga0150983_153749633	3300011120	Forest Soil	VADNSWSAHIGYLEEEVKKLDERADRLEASVAGQEDEQKKHASRELVKRLRDEAGDHRKYLALVK
Ga0137392_106654852	3300011269	Vadose Zone Soil	MAEDSWKAHIAYLEDEVKKIGERADKLEAMIPELESEPKKHALRELVNHLRDEASEHLKYLALVRQK*
Ga0137383_101469402	3300012199	Vadose Zone Soil	MAEDSWKAHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVSHLRDEASEHLKYLALVRQK*
Ga0137362_103796781	3300012205	Vadose Zone Soil	MAEDSWKAHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVSHLRDEVSEHLKYLALVKQK*
Ga0137377_118132491	3300012211	Vadose Zone Soil	AHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVKHLRDEASEQLKYLALVRQK
Ga0137385_100302351	3300012359	Vadose Zone Soil	AHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVKHLRDEASEQLKYLALVKQK
Ga0137361_100058475	3300012362	Vadose Zone Soil	MAEDSWKAHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVSHLRDEASEHLKYLALVKQK*
Ga0137395_108647082	3300012917	Vadose Zone Soil	MVRHQIATKGANGMAEDTWKAHISYLEEEVKKMSERADKLEAMIPDLESEQKRQALRQLVSRLRDEVSEHRKYLALVQQI*
Ga0137416_101373882	3300012927	Vadose Zone Soil	MAEDSWKAHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVSHLRDEASEHLKFLALVKQK*
Ga0157374_100529375	3300013296	Miscanthus Rhizosphere	VADDSWNAHIKYLEDEVKKIEERAGKLEKMIPDLKNEPKKHACWKLINDLRDEANQHRKYLALVKRFIQPA*
Ga0182015_106373361	3300014495	Palsa	MVCPKIDSTENSWSAHAAYLEEEVKKIDARADRLESVIPGVENEPKKHALQELLKQLRDEASEHRKYLALVKPK*
Ga0182024_100133096	3300014501	Permafrost	MVCPKIGLAENSWNAHAAYLEEEVKKIDARADRLEIVIPGVENEPKKHALQELLKQLRDEASEHRKYLALVKPK*
Ga0182024_100698363	3300014501	Permafrost	MSEHSWNAHIGYLEEEVKKIDGRADNLEAIIPNLQNEQKKHALGELLKQLRDQASEHRKYLALVKQLISPAKF*
Ga0182024_129673062	3300014501	Permafrost	VAEDSWNVHIAYLEDEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK*
Ga0187812_12890521	3300017821	Freshwater Sediment	VYGVAVRSEGEGNGVVEDSWNAHISYLEDEVKKIDERADKLEATIPDLKNEQKKHALRELVKHLRDEATEYRKYLALVKQK
Ga0187818_100397292	3300017823	Freshwater Sediment	VAEDSWNAHISYLEDEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK
Ga0187818_102723461	3300017823	Freshwater Sediment	MGVNQVADDSWNAHIRYLEDEVKKIDERAGKLDKMIPDMKNEPKKHACRELLNGLRDEASQYRKYLALVKRFIQHE
Ga0187818_104366771	3300017823	Freshwater Sediment	VADDSWNAHIKYLEDEVKKIEERAEKLENMIPDLKNEPKKHACRKLINDLRDEASQHRKYLALVKRFIQPE
Ga0187820_10249162	3300017924	Freshwater Sediment	VYGVAVRSEGEGNGVAEDSWNAHIAYLEDEVKKIDERADRLEATIPDLENEQKKHALRELVKHMRDEASEYRKYLALVKKK
Ga0187807_11716541	3300017926	Freshwater Sediment	VYGVAVRSEGEGNGVAEDSWNAHIGYLKDEVKKIDERADRLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQKYPFNAKGAGEG
Ga0187824_100027807	3300017927	Freshwater Sediment	LTDNSWNAHTRYLEDELKKLDERAGKLEEIIADLENGQKKHALRELVNRLRDEASCHRKYLALVKQ
Ga0187824_100521592	3300017927	Freshwater Sediment	MVENSWNAHIAYLEDEVKKIDERAEKLEAMLPSLESGQKKRALRELINHIRDEASEHRKYLALVKQK
Ga0187824_100539291	3300017927	Freshwater Sediment	VPRAAARREEEGKAVAETSWDGHIDYLEDEVKKIDERVDRLVAMIRQQENEQKKQALRELVKHLQDEATEDRKYLALVKRRR
Ga0187806_10728051	3300017928	Freshwater Sediment	VAEDSWNAHIGYLKDEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEYRKYLALMKQK
Ga0187825_100257112	3300017930	Freshwater Sediment	VAETSWDGHIDYLEDEVKKIDERVDRLVAMIREQENEQKKQALRELVKHLQDEATEDRKYLALVKRQ
Ga0187825_101219952	3300017930	Freshwater Sediment	MAENSWNAHIAYLEDEVKKIDERAEKLEAMLPSLESGQKKRALRELINHIRDEASEHRKYLALVKQK
Ga0187801_101949681	3300017933	Freshwater Sediment	MVCRKGANGMAEDPWKAHISYLEEEVKKIGERADRLEAMLPNLEDEQKKYAVRELISHLRDELNEHRKYLAVMKPRRPPAAQP
Ga0187821_100016802	3300017936	Freshwater Sediment	MVENSWNAHIAYLEDEVKKIDERAEKLEAMLPSLESGQKKRALLELINHIRVEASEHRKYLALVKQK
Ga0187821_100076014	3300017936	Freshwater Sediment	VAEDSWNTHIGYLEDEVKKIDDRADKLEATIPDLENEQKKHALRELIKHLRDEASEHRKYLALVKQK
Ga0187821_100093093	3300017936	Freshwater Sediment	VAETSWDGHIGYLEDEVKKIDERVDRLVAMIRQQENEQKKQALRELVKHLQDEATEDRKYLALVKRQ
Ga0187821_100718822	3300017936	Freshwater Sediment	VAEDSWNAHIAYLEDEVKKIDERADRLEATIPDLENEQKKHALRELVKHMRDEASEYRKYLALVKQK
Ga0187808_100209592	3300017942	Freshwater Sediment	VAEDSWNAHIGYLEDEVKKIDERADKLEATIPDLKNEQKKHALRELVKHLRDEATEYRKYLALVKQK
Ga0187819_100687712	3300017943	Freshwater Sediment	VYGVAVRSEGEGNGVVEDSWNAHISYLEDEVKKIEERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK
Ga0187819_103536041	3300017943	Freshwater Sediment	MAEDPWKAHISYLEEEVKKIGERADRLEAMLPNLEDEQKKYAVRELISHLRDELNEHRKYLAVMKPRRPPAAQP
Ga0187817_101097934	3300017955	Freshwater Sediment	VAVRSEGEGNGVAEDSWNAHISYLEDEVKKNEERAAKLEATIPDLENEQKKHALRELVKHLRDEASEYRKYLALVKQK
Ga0187817_105389802	3300017955	Freshwater Sediment	MGINEVADDSWNAHIKYLEDEVKKIEERAEKLENMIPDLKNEPKKHACRKLVNDLRDEASQHRKYLALVKRFIQHE
Ga0187823_102107801	3300017993	Freshwater Sediment	MAVRSNGEGNGVAEDSWNTHIGYLEDEVKKIDDRADKLEATIPDLENEQKKHALRELVKHMRDEASEYRKYLALVKQK
Ga0187822_100270152	3300017994	Freshwater Sediment	LTDNSWNAHTSYLEDELKKLDKRAGKLEEMIADLENGQKKHALRELVNRLRDEASCHRKYLALVKQ
Ga0187816_104389432	3300017995	Freshwater Sediment	MGVNQVADDSWNAHIRYLEDEVKKIDERAGKLDKMIPDMKNEPKKHACRELVNGLRDEASQYRKYLALVKRFIQHE
Ga0187815_100336202	3300018001	Freshwater Sediment	VYGVAVRSEGEGNGVAEDSWNAHISYLEDEVKKIDERADKLEATIPDLKNEQKKHALRELVKHLRDEASEYRKYLALVKQK
Ga0187804_101500372	3300018006	Freshwater Sediment	VAEDSWNAHISYLEDEVKKIDERADKLEATIPDLKNEQKKHALRELVKHLRDEASEYRKYLALVKQK
Ga0187805_103690051	3300018007	Freshwater Sediment	MAEDPWKAHISYLEEEVKKIGERVDRLEAMLPNLEDEQKKYAVRELISHLRDELNEHRKYLAVMKPRRPPAAQP
Ga0187810_100621482	3300018012	Freshwater Sediment	VYGVAVRSEGEGNGVVEDSWNAHISYLEDEVKKIDERADKLEATIPDLENEQKRHALRELVKHLRDEASEHRKYLALVKQK
Ga0066667_100325712	3300018433	Grasslands Soil	VAEDSWNAHIGYLENEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK
Ga0210400_107549592	3300021170	Soil	MTEDSWNAHISYLEDEVKKIEERADKVENMIPDLESEQKIYASRELVNRLRSEASYQRKYLALVKQK
Ga0210393_107352442	3300021401	Soil	MVRPKIDVAENSWHAHTAYLEDEVKKLDARADRLETIIPGVENEPKKHALQELLKQLQDEASEHRKYLALVKPK
Ga0210383_101451102	3300021407	Soil	MADYSWNAHTSYLEDEVKKLDERAGKLDEMITNLENGQKKYALRELVNRLRDEASSHRKYLALVKQ
Ga0210394_100555862	3300021420	Soil	MAEDSWNAHIGYLEDEVKKIDARADKLEATIPNLEDEPKKHALRELVKHLRDEASEHRKYLALVKQK
Ga0210394_101344353	3300021420	Soil	MVEDPRNAHIRYLEEEVKKLGERADKLEAMILNLENEQKKHAVRELVSHLRDEVREHRKYLALMKPK
Ga0210394_101442882	3300021420	Soil	MAEDSWNDHIGYLESEVKKIDERADKLEAMIAGQESEAKKGALREIVNRLRREASEHRKYLALVKQK
Ga0210394_102373561	3300021420	Soil	VAEDSWDAHIGYLEDEVKKIDERADKLEAIILDLENEQKKHALRELVRHLRDEACEHRKYLALVKHK
Ga0210394_104128503	3300021420	Soil	AHISYLEDEVKRLEERADKLENMIPDLESDERIHALRELVNHLREEARYHRKYLALVKQK
Ga0209002_101342681	3300025289	Soil	MTEESLNVHLSYLEDEVKKTDERANALEAMVPDLKSEQKRHAARELVSHLRDEVSERRKYLALVRQK
Ga0209751_106828512	3300025327	Soil	MTEESLNVHLSYLEDEVKKTDERANALEAMVPDLKSEQKRHAARELVSHLRDEVSE
Ga0209483_10300944	3300025862	Arctic Peat Soil	MADDSWTAHIAYLEDDVKKIAERVAKLEKMIPDLTNESRKHLCRKRIHDLRDQANEHRKYLALVKQFVHPG
Ga0207710_100975642	3300025900	Switchgrass Rhizosphere	VADDSWNAHIKYLEDEVKKIEERAGKLEKMIPDLKNEPKKHACRKLINDLRDEANQHRKYLALVKRFIQHK
Ga0209239_11259052	3300026310	Grasslands Soil	HAARGQGNGVAEDSWNAHIGYLENEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASQHRKYLALVKQK
Ga0209154_10154414	3300026317	Soil	MVWRHAARGQGNGVAEDSWNAHIGYLENEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK
Ga0209375_10293035	3300026329	Soil	VAEDSWNAHIGYLEDEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK
Ga0209377_11315871	3300026334	Soil	MAEDSWKAHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVKHLRDEASEHLKYLALVRQK
Ga0209056_103489602	3300026538	Soil	MVWRHAARGQGNGAAEDSWNAHIGYLENEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK
Ga0209214_10149351	3300027071	Forest Soil	VAEDSWNAHIGYLEDEVKKIDERADKLEAAIPDLENEQKKHALRELVKHLRDEASEHRK
Ga0208043_11496881	3300027570	Peatlands Soil	MGVNQVADDSWNAHIRYLEDEVKKIDERAGKLDKMIPGMKNEAKKHACRELVNGLRDEARQYRKYLALVKRFIQHE
Ga0208827_10599842	3300027641	Peatlands Soil	VADDSWNAHIRYLEDEVKKIDERAGKLDILIPDMKNEAKKHACRELVNGLRDEARQYRKYLALVKRFIQHE
Ga0209736_10138163	3300027660	Forest Soil	MAEDSWNAHIRYLEDEVKKLEERADKLENMIPDLESDEKIHALRELVNHLRDEARYHRKYLALVKQK
Ga0208696_10776021	3300027696	Peatlands Soil	TRGVYLMGVNQVADDSWNAHIRYLEDEVKKIDERAGKLDKMIPGMKNEAKKHACRELVNGLRDEARQYRKYLALVKRFIQHE
Ga0209060_101132322	3300027826	Surface Soil	MNQTAHTSYLENEVKKLDERAGKLEEIIADLENGQKKHAFRELVNRLRGEASCHRKYLALVKQ
Ga0209517_100263725	3300027854	Peatlands Soil	VADDSWNAHIRYLEDEVKKIDERAGKLDILIPDMKNEAKKHACRELVNGLRDEARQYRKYLPLVKRFIQQE
Ga0209579_102432292	3300027869	Surface Soil	MAQDSWNVHSGYLEDEVKKIDERADKLEEMISGPKNEQKKHALRELVNHLRDEASYHRKYLALVKRK
Ga0209579_104359011	3300027869	Surface Soil	MAEDAWNDHIGYLESEVKKIDERADKLEAMIADLESETKKDALRELVNRLRGEASEHRKYLALVKRK
Ga0209579_104705681	3300027869	Surface Soil	VHYELPVVCRVWCGGVEVRSGEGNEVAEDSWNAHIGYLEDEVKKIDARADKLEATIPDLEDEPKKHALRELVKRLRDEASEHRKYLALVKQK
Ga0209380_106436191	3300027889	Soil	VAEDSWNAHIGYLEDEVKKIDARADKLEATIPDLEDEPKKQALRELVKHLRDEASEHRKYLALVKQK
Ga0209068_100109313	3300027894	Watersheds	VADDARKAHIKYLEDEVKKIGERADKLEKMIPGLANEQRKHAFKELVNGLRDEASQYRKYLELVKRFIQHE
Ga0209415_100296621	3300027905	Peatlands Soil	VADDSWNAHIRYLEDEVKKIDERAGKLDILIPDMKNEAKKHACRELVNGLRDEARQYR
Ga0209415_100964851	3300027905	Peatlands Soil	MGVNQVADDSWNAHIRYLEDEVKKIDERAGKLDKMIPGMKNEAKKHACRELVNGLRDEARQYR
Ga0209583_107028241	3300027910	Watersheds	VADDSWNAHIKYLEDEVKKINERVDKLEKMIPDLKNEPKKHACRKLINDLRDEASQHRKYLALVKRFIQHE
Ga0209069_107773142	3300027915	Watersheds	VADDSWNAHIKYLEDEVKKINERADKLEKMIPDLKNEPKKQACRELVNGLRDEASQYRKYLALVKRFIQHQ
Ga0209062_100103614	3300027965	Surface Soil	VCGVAERSEGEGNRVVEDSWNTHIDYLEDEVKKIDERAGRLEVTIADLENEQKKHALRELVQHLRDAAKEHRKYLALVKRK
Ga0209168_100371543	3300027986	Surface Soil	MAEDSWNAHISYLEDEVKKIDERADKLEEMIPGLENEQKKHALRELVNHLRDESSYHRKYLSLVKRK
Ga0209168_100553542	3300027986	Surface Soil	MAEDSWNAHISYLEDEVKKIDERADKLEEMIPGLENEQRKRALRELVNHLRDEASYHRKFLALVKRK
Ga0209168_100763851	3300027986	Surface Soil	MAEDSWDAHISYLEDEVKKIDERADKLAEMIPALENEQKKNALRELVNHLRDGASYHRKYLALVKQK
Ga0209168_104513741	3300027986	Surface Soil	PHGVRWFRAEEPMAEDSWNEHIGYLESEVKKIDERANRLEATIADLESEAKKQALRELVNRLRDEASEHRKYLALVKRK
Ga0137415_101779752	3300028536	Vadose Zone Soil	MAEDSWKAHIAYLEDEVKKIGERADKLEAMIPDLESEPKKQALRELVSHLRDEASEHLKFLALVKQK
Ga0265338_105793762	3300028800	Rhizosphere	MPEDSWNAHIAYLEDEVKKMDERADKLEAMLPHLESERQKHALQELATHLREEAGEHRKYLALVKRK
Ga0308309_115424601	3300028906	Soil	VAEDSWNAHIGYLEDEVKKIDARAGKLEATIPGLEDEPKKHALRELVKRLRDEASEHRKYLALVKQK
Ga0311339_115522301	3300029999	Palsa	TVEGNGVAEDSWKAHIAYLEDEVTKIDERADKLEAIIPVLENEQKKHALREHLKQLRYEASEHRKYLSLVKHD
Ga0316363_100156261	3300030659	Peatlands Soil	VADDSWNAHIRYLEDEVKKIDERAGKLDILIPDMKNEAKKHACRELVNGLRDEARQYRKYLALVKR
Ga0075388_113176652	3300030848	Soil	MEWPKSWNAHIGYLEDEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK
Ga0170823_135329192	3300031128	Forest Soil	MEWPKSWNAHIGYLGDEVKKIDERADKLEATIPDLENEQKKHALRELVKHLRDEASEHRKYLALVKQK
Ga0302325_1004803210	3300031234	Palsa	VAEDSWKAHIAYLEDEVTKIDERADKLEAIIPVLENEQKKHALREHLKQLRYEASEHRKYLSLVKHD
Ga0302325_133036612	3300031234	Palsa	TADNAVAENSWNAHTSYLEDEVKKLDARADRLETIIPGVQNEPKKHVLQELLKQLRDQASEHRKYLALVTPK
Ga0302326_106213482	3300031525	Palsa	GVAEDSWKAHIAYLEDEVTKIDERADKLEAIIPVLENEQKKHALREHLKQLRYEASEHRKYLSLVKHD
Ga0302326_107237091	3300031525	Palsa	VTFTSETKPTSPPPEPTADNAVAENSWNAHTSYLEDEVKKLDARADRLETIIPGVQNEPKKHVLQELLKQLRDQASEHRKYLALVTPK
Ga0265342_103766532	3300031712	Rhizosphere	MTEDPWKAHISYLEAEVEKMIERANKLEAMIPDLESVQKKQALRGLISRLRDDVSEHRKFLALVKQK
Ga0307476_101979152	3300031715	Hardwood Forest Soil	MVPPKIDVAENSWHAHTAYLEDEVKKLDARADRLETIIPGVENEPKKHALQELLKQLQDEASEHRKYLALVKPK
Ga0214473_101319321	3300031949	Soil	MGGDSWAAPISYLEDEMKRIDQRADKLEKMSPDLESERKKHALREPVSHLRDEASYHPVSGASQHK
Ga0335085_125082141	3300032770	Soil	LIGVNEVADVSWNAHIKYLEDEVKKIEERADKLEKMIPDLKNEPKKHACRKLVSDLRDEASQHRKYLALVKRFIQHE
Ga0335084_102616761	3300033004	Soil	MAEDPWKAHIGYLEDEVKKISERANKLEAMIPDLESEQKKHALREIVGHLRDEVSEHRKFLALVKQQ
Ga0326726_100298064	3300033433	Peat Soil	MAEDPWKAHISYLEAEVDKMVERAGKLEAMIPELESNEKKRALRELVSHLRDDVSEHRKFLALVKQK
Ga0326726_106242872	3300033433	Peat Soil	VADDSWNAHIKYLEDEVKKIEERADKLEKMIPDLKNEPKKHACRKLINDLRDEANQHR
Ga0326726_118482522	3300033433	Peat Soil	MADDPWKSHIRYLEEEVEKIGERADKLEALIPGLESEPKKRALRELIIRLRSEANEHRKYLALM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050488

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences