NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F050487

Metagenome / Metatranscriptome Family F050487

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F050487
Family Type Metagenome / Metatranscriptome
Number of Sequences 145
Average Sequence Length 53 residues
Representative Sequence MDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS
Number of Associated Samples 98
Number of Associated Scaffolds 145

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 84.83 %
% of genes near scaffold ends (potentially truncated) 18.62 %
% of genes from short scaffolds (< 2000 bps) 94.48 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (88.276 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(19.310 % of family members)
Environment Ontology (ENVO) Unclassified
(44.828 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(82.069 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 59.26%    β-sheet: 0.00%    Coil/Unstructured: 40.74%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 145 Family Scaffolds
PF01925TauE 3.45
PF00486Trans_reg_C 2.07
PF01226Form_Nir_trans 2.07
PF03704BTAD 1.38
PF08241Methyltransf_11 0.69
PF13545HTH_Crp_2 0.69
PF01970TctA 0.69
PF13458Peripla_BP_6 0.69
PF13437HlyD_3 0.69
PF00400WD40 0.69
PF01243Putative_PNPOx 0.69
PF11578DUF3237 0.69
PF06568DUF1127 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 145 Family Scaffolds
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 3.45
COG2116Formate/nitrite transporter FocA, FNT familyInorganic ion transport and metabolism [P] 2.07
COG3629DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domainTranscription [K] 1.38
COG3947Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domainsTranscription [K] 1.38
COG1784TctA family transporterGeneral function prediction only [R] 0.69
COG3333TctA family transporterGeneral function prediction only [R] 0.69
COG5457Uncharacterized conserved protein YjiS, DUF1127 familyFunction unknown [S] 0.69


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A88.28 %
All OrganismsrootAll Organisms11.72 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c2262044Not Available712Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101532799Not Available2240Open in IMG/M
3300000956|JGI10216J12902_103630647Not Available1330Open in IMG/M
3300004156|Ga0062589_102527546Not Available532Open in IMG/M
3300004643|Ga0062591_100163206All Organisms → cellular organisms → Bacteria → Proteobacteria1576Open in IMG/M
3300005289|Ga0065704_10621736Not Available596Open in IMG/M
3300005290|Ga0065712_10488902Not Available657Open in IMG/M
3300005290|Ga0065712_10528900Not Available631Open in IMG/M
3300005293|Ga0065715_10566289Not Available730Open in IMG/M
3300005294|Ga0065705_10244158Not Available1203Open in IMG/M
3300005295|Ga0065707_10189639Not Available1348Open in IMG/M
3300005295|Ga0065707_10379729Not Available879Open in IMG/M
3300005295|Ga0065707_10603313Not Available689Open in IMG/M
3300005328|Ga0070676_10318418Not Available1060Open in IMG/M
3300005331|Ga0070670_100135028All Organisms → cellular organisms → Bacteria2132Open in IMG/M
3300005331|Ga0070670_100897892Not Available803Open in IMG/M
3300005333|Ga0070677_10798264Not Available539Open in IMG/M
3300005340|Ga0070689_102121547Not Available515Open in IMG/M
3300005343|Ga0070687_100490181Not Available825Open in IMG/M
3300005345|Ga0070692_10794395Not Available646Open in IMG/M
3300005353|Ga0070669_100116917Not Available2030Open in IMG/M
3300005353|Ga0070669_101626100Not Available563Open in IMG/M
3300005354|Ga0070675_101659918Not Available590Open in IMG/M
3300005356|Ga0070674_100283185All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1315Open in IMG/M
3300005356|Ga0070674_101198741All Organisms → cellular organisms → Bacteria → Proteobacteria674Open in IMG/M
3300005356|Ga0070674_101554390Not Available596Open in IMG/M
3300005364|Ga0070673_100265112Not Available1502Open in IMG/M
3300005364|Ga0070673_102275671Not Available515Open in IMG/M
3300005365|Ga0070688_100296154Not Available1168Open in IMG/M
3300005365|Ga0070688_100558732Not Available871Open in IMG/M
3300005367|Ga0070667_102304088Not Available507Open in IMG/M
3300005441|Ga0070700_100704943Not Available803Open in IMG/M
3300005444|Ga0070694_101705049Not Available536Open in IMG/M
3300005456|Ga0070678_101707038Not Available593Open in IMG/M
3300005466|Ga0070685_10453753Not Available899Open in IMG/M
3300005543|Ga0070672_100474321Not Available1080Open in IMG/M
3300005543|Ga0070672_101551130Not Available594Open in IMG/M
3300005544|Ga0070686_101279595Not Available612Open in IMG/M
3300005549|Ga0070704_101769000Not Available572Open in IMG/M
3300005564|Ga0070664_100980259Not Available794Open in IMG/M
3300005578|Ga0068854_101642423Not Available586Open in IMG/M
3300005719|Ga0068861_101182038Not Available739Open in IMG/M
3300005719|Ga0068861_101535597Not Available654Open in IMG/M
3300005840|Ga0068870_10280198All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300005844|Ga0068862_100880547Not Available879Open in IMG/M
3300005844|Ga0068862_102342842Not Available546Open in IMG/M
3300006177|Ga0075362_10375576Not Available714Open in IMG/M
3300006237|Ga0097621_101090347Not Available749Open in IMG/M
3300006606|Ga0074062_11607023Not Available658Open in IMG/M
3300006844|Ga0075428_100077560All Organisms → cellular organisms → Bacteria3627Open in IMG/M
3300009053|Ga0105095_10478960Not Available689Open in IMG/M
3300009087|Ga0105107_10155764Not Available1607Open in IMG/M
3300009094|Ga0111539_10261694All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2014Open in IMG/M
3300009094|Ga0111539_10820222Not Available1082Open in IMG/M
3300009098|Ga0105245_12473522Not Available573Open in IMG/M
3300009100|Ga0075418_11386566Not Available762Open in IMG/M
3300009100|Ga0075418_11790899Not Available668Open in IMG/M
3300009100|Ga0075418_12399097Not Available575Open in IMG/M
3300009100|Ga0075418_13173829Not Available500Open in IMG/M
3300009147|Ga0114129_11890372Not Available724Open in IMG/M
3300009148|Ga0105243_10157868Not Available1953Open in IMG/M
3300009148|Ga0105243_11796210Not Available644Open in IMG/M
3300009148|Ga0105243_12221046Not Available586Open in IMG/M
3300009156|Ga0111538_12834866Not Available607Open in IMG/M
3300009162|Ga0075423_12848442Not Available530Open in IMG/M
3300009176|Ga0105242_10745214Not Available964Open in IMG/M
3300009553|Ga0105249_12004320Not Available652Open in IMG/M
3300010399|Ga0134127_11810021Not Available687Open in IMG/M
3300010400|Ga0134122_10662068Not Available975Open in IMG/M
3300010400|Ga0134122_10827604Not Available887Open in IMG/M
3300012905|Ga0157296_10147987Not Available699Open in IMG/M
3300012911|Ga0157301_10269811Not Available607Open in IMG/M
3300012914|Ga0157297_10350736Not Available574Open in IMG/M
3300013306|Ga0163162_10875146Not Available1012Open in IMG/M
3300013308|Ga0157375_13389911Not Available531Open in IMG/M
3300014326|Ga0157380_11315319Not Available770Open in IMG/M
3300014968|Ga0157379_10764560Not Available910Open in IMG/M
3300014969|Ga0157376_10528313Not Available1164Open in IMG/M
3300015201|Ga0173478_10624893Not Available563Open in IMG/M
3300015371|Ga0132258_11305511All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1834Open in IMG/M
3300017792|Ga0163161_10595097Not Available911Open in IMG/M
3300018072|Ga0184635_10338029Not Available581Open in IMG/M
3300018073|Ga0184624_10066953All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. PRIMUS421489Open in IMG/M
3300018073|Ga0184624_10358447Not Available653Open in IMG/M
3300018432|Ga0190275_10098269Not Available2588Open in IMG/M
3300018432|Ga0190275_10287335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense1606Open in IMG/M
3300018432|Ga0190275_10307818Not Available1557Open in IMG/M
3300018469|Ga0190270_10406558Not Available1262Open in IMG/M
3300018469|Ga0190270_10855036Not Available923Open in IMG/M
3300018469|Ga0190270_11241838Not Available785Open in IMG/M
3300018469|Ga0190270_11306999Not Available768Open in IMG/M
3300018469|Ga0190270_12415148Not Available587Open in IMG/M
3300018476|Ga0190274_10496196Not Available1219Open in IMG/M
3300018476|Ga0190274_10713368Not Available1049Open in IMG/M
3300018476|Ga0190274_12068228Not Available666Open in IMG/M
3300018476|Ga0190274_13218677Not Available549Open in IMG/M
3300018476|Ga0190274_13759946Not Available513Open in IMG/M
3300018481|Ga0190271_10265160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1759Open in IMG/M
3300018481|Ga0190271_10357208Not Available1544Open in IMG/M
3300018481|Ga0190271_10956798Not Available981Open in IMG/M
3300018481|Ga0190271_10973494Not Available973Open in IMG/M
3300018481|Ga0190271_11897765Not Available706Open in IMG/M
3300018481|Ga0190271_13402454Not Available533Open in IMG/M
3300018481|Ga0190271_13794575Not Available506Open in IMG/M
3300019361|Ga0173482_10418467Not Available628Open in IMG/M
3300019362|Ga0173479_10766002Not Available529Open in IMG/M
3300019377|Ga0190264_10870876Not Available698Open in IMG/M
3300025315|Ga0207697_10242105Not Available797Open in IMG/M
3300025893|Ga0207682_10226699Not Available865Open in IMG/M
3300025893|Ga0207682_10413845Not Available637Open in IMG/M
3300025901|Ga0207688_10235328Not Available1106Open in IMG/M
3300025901|Ga0207688_10656936Not Available662Open in IMG/M
3300025904|Ga0207647_10531123Not Available654Open in IMG/M
3300025907|Ga0207645_10273267Not Available1121Open in IMG/M
3300025908|Ga0207643_10248202Not Available1096Open in IMG/M
3300025918|Ga0207662_10740729Not Available690Open in IMG/M
3300025923|Ga0207681_10123244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1904Open in IMG/M
3300025923|Ga0207681_11709582Not Available526Open in IMG/M
3300025926|Ga0207659_10696461Not Available870Open in IMG/M
3300025926|Ga0207659_11420195Not Available595Open in IMG/M
3300025930|Ga0207701_10067703All Organisms → cellular organisms → Bacteria → Proteobacteria3245Open in IMG/M
3300025930|Ga0207701_10287545All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300025933|Ga0207706_11396013Not Available575Open in IMG/M
3300025935|Ga0207709_10432107Not Available1014Open in IMG/M
3300025936|Ga0207670_10926567Not Available731Open in IMG/M
3300025936|Ga0207670_11772573Not Available525Open in IMG/M
3300025937|Ga0207669_10053578All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2431Open in IMG/M
3300025937|Ga0207669_10691803Not Available837Open in IMG/M
3300025937|Ga0207669_10705409Not Available830Open in IMG/M
3300025938|Ga0207704_11608385Not Available558Open in IMG/M
3300025940|Ga0207691_10712896Not Available846Open in IMG/M
3300025945|Ga0207679_10497020Not Available1088Open in IMG/M
3300026075|Ga0207708_10767289Not Available828Open in IMG/M
3300026116|Ga0207674_10261943Not Available1676Open in IMG/M
3300026118|Ga0207675_102522197Not Available525Open in IMG/M
3300026121|Ga0207683_10722044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria924Open in IMG/M
3300026121|Ga0207683_10821033Not Available863Open in IMG/M
3300026121|Ga0207683_11701795Not Available580Open in IMG/M
3300027907|Ga0207428_10332849All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1120Open in IMG/M
3300028597|Ga0247820_11349632Not Available518Open in IMG/M
3300028802|Ga0307503_10691450Not Available572Open in IMG/M
3300031547|Ga0310887_10542385Not Available706Open in IMG/M
3300031740|Ga0307468_100465276Not Available990Open in IMG/M
3300031740|Ga0307468_101839643Not Available575Open in IMG/M
3300032174|Ga0307470_10193157Not Available1293Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere11.72%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.59%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere6.21%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.21%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.14%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.45%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.45%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.76%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.07%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.07%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.07%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere2.07%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.07%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.07%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.07%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.07%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.38%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.38%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.38%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.69%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.69%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.69%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006177Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_226204423300000033SoilMDMXLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPHLDCRARLIWESGS*
INPhiseqgaiiFebDRAFT_10153279943300000364SoilMDMLLGGLAFAALIFGQFVALVAVYEVRKSRVSEASARSHLDHRAKLIWDSGS*
JGI10216J12902_10363064723300000956SoilMDMLLGGLAFAAIILGQFAAVIAVHSERKRRQSDASNPMHFDDRAELIWQAGS*
Ga0062589_10252754613300004156SoilLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS*
Ga0062591_10016320623300004643SoilMDMLLGGLAFAAIIFGQFAAVVAVHGERKNRESEASAPQNFDHRTRLIWHSGS*
Ga0065704_1062173623300005289Switchgrass RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPHLDHRARLIWESGS*
Ga0065712_1048890213300005290Miscanthus RhizosphereMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPQLDDRARLIWDFGS*
Ga0065712_1052890013300005290Miscanthus RhizosphereAAIIFGQFAAVVAVHGERKRRESEASAPQNLDHRTRLIWDSGS*
Ga0065715_1056628913300005293Miscanthus RhizosphereGIILAQFAAVVAVHGERKSRESDALSPTRLDDRTKLIWRCGS*
Ga0065705_1024415823300005294Switchgrass RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPYLDHRARLIWESGS*
Ga0065707_1018963933300005295Switchgrass RhizosphereMDMLLGGLAFAAIVLGQFAAVVAVHGERTNLESDALSPTHLDNREKLIWQSGS*
Ga0065707_1037972923300005295Switchgrass RhizosphereMDLLLGGIAFAAIIFGQFAAVVAVHGERKSRQSEASAPPHLDHRAMIVWHSGS*
Ga0065707_1060331323300005295Switchgrass RhizosphereMDTLLGGIAFAAIIVGHLAAVVAVHGERKNRESEASAPPHFDRREMLIWQSGS*
Ga0070676_1031841833300005328Miscanthus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWESGS*
Ga0070670_10013502823300005331Switchgrass RhizosphereMLIGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS*
Ga0070670_10089789223300005331Switchgrass RhizosphereMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASAPQNLDHRTRLIWDSGS*
Ga0070677_1079826423300005333Miscanthus RhizosphereMDMLLVGLAFAAIILGQFAAVIAVHGERKSRESDALTPTRLDDRAKLIWQSGG*
Ga0070689_10212154723300005340Switchgrass RhizosphereMDLLLGGLAFAAIVFGQVAAVVAVHGEGKRREAEASAPPHLDHRARLIW
Ga0070687_10049018123300005343Switchgrass RhizosphereMDILLGGLAFAAMILAQFAAVVAVHHERKSRESEASAPRRVDHRARHIWDSAS*
Ga0070692_1079439523300005345Corn, Switchgrass And Miscanthus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS*
Ga0070669_10011691743300005353Switchgrass RhizosphereMDMLLGGVAFAALILGQFAAVIAVHGERKSRESDALSPTRLDDRTKLIWQCGS*
Ga0070669_10162610023300005353Switchgrass RhizosphereMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS*
Ga0070675_10165991823300005354Miscanthus RhizosphereMDMLLGGLAFAAIILGQFAAVVAVHGERTSRESDALSPTHLDDREKLTWQSGS*
Ga0070674_10028318533300005356Miscanthus RhizosphereMDMLLGGLAFGAIMFGQFAAVVAIHRERKIRESGAVAPPPLDHCARLIWDSGS*
Ga0070674_10119874133300005356Miscanthus RhizosphereSEESTMDMLLGGLAFAAIILGQFAAVIAVHRERKSRESDALSPTRLDDRTKLIWQCGS*
Ga0070674_10155439013300005356Miscanthus RhizosphereMDMLLGGVAFAALILGQFAAVIAVQGERKRRESEALAPPHLDHRARLIWESGS*
Ga0070673_10026511223300005364Switchgrass RhizosphereMDLLLGGLAFAAIVFGQVAAVVAVHGEGKRREAEASAPPHLDHRARLIWESGS*
Ga0070673_10227567113300005364Switchgrass RhizosphereMDMLLGGLAFGAIILSQFAAVIAVHGERKRRESETFAPPHVDHRTRLIWGCGS*
Ga0070688_10029615423300005365Switchgrass RhizosphereTSEESTMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPQLDDRARLIWDFGS*
Ga0070688_10055873213300005365Switchgrass RhizosphereMDMWLGGPAFAAIIFGPFAAVVAVHGERKSRESEAFDAPRLDHRERLIWDRAVEYAVRST
Ga0070667_10230408813300005367Switchgrass RhizosphereMDMLLGSLALAAIIFGQFAAIVTVHGERKRRQSDASNPLQFDHRTKLIWNFGS*
Ga0070700_10070494323300005441Corn, Switchgrass And Miscanthus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGERKRREAEAPALPRLDHRARLIWESGS*
Ga0070694_10170504923300005444Corn, Switchgrass And Miscanthus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPQLDHRAMVIWDSGS*
Ga0070678_10170703823300005456Miscanthus RhizosphereMDLLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASAPQNLDHRTRLIWDSGS*
Ga0070685_1045375313300005466Switchgrass RhizosphereMDMLLGGVAFAALILGQFAAVIAVHGERKSRESDALTPTRLDDRAKLIWQS
Ga0070672_10047432133300005543Miscanthus RhizosphereMDTLLGGLAFAGIILAQFAAVVAVHGERKSRESDALSPTRLDDRTKLIWQSGS*
Ga0070672_10155113013300005543Miscanthus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGERKRREAEAPALPRLDHRARLIWESAS*
Ga0070686_10127959513300005544Switchgrass RhizosphereMEMLLGGLAFAAIIFGQFAAVVAVHGERKNRESEASAPPNFDHRTRLIWHSGS*
Ga0070704_10176900023300005549Corn, Switchgrass And Miscanthus RhizosphereLGGLAFAAIIFGQFAAVVAVHGERKRRESEASAPQNLDHRTRLIWDSGS*
Ga0070664_10098025913300005564Corn RhizosphereMEMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASAPQNLDHRTRLIWDSGG*
Ga0068854_10164242323300005578Corn RhizosphereMDMLLGGLAFAALILGQFAAVIAVHGVRKGRALDASDGLQFDHRTRLIWNSG
Ga0068861_10118203823300005719Switchgrass RhizosphereMDMLLGGLAFAAIIFAQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS*
Ga0068861_10153559713300005719Switchgrass RhizosphereMDILLGGLAFAAMILAQFAAVVAVHHERKSRESEASAPRRVDHRARHIWDFAS*
Ga0068870_1028019833300005840Miscanthus RhizosphereMDMLLGGLAFAAIIFGQFAAVVAVHGERKRREAEAPALPRLDHRARLIWESAS*
Ga0068862_10088054713300005844Switchgrass RhizosphereMEMLLGGLAFAVMIFGQFSAVVAVHGERKRRELEASSAPRLDHRARSIWDFGS*
Ga0068862_10234284223300005844Switchgrass RhizosphereMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPQLDHRAMVIWDSGS*
Ga0075362_1037557613300006177Populus EndosphereMDMVLGGLAFAAIIFGQFAAVVAVHRERTSREAQAADLPHLDHRARLIWHGN*
Ga0097621_10109034723300006237Miscanthus RhizosphereVPPPAKTSEESTMDMLLGGVAFAALILGQFAAVIAVQGERKRRESEALAPPHLDHRARLIWESAS*
Ga0074062_1160702313300006606SoilMDMALGGLAFAAIIFGQFAAVVAVHGERKRREAEAPALPRLDHRARLIWESAS*
Ga0075428_10007756043300006844Populus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPHLDCRARLIWESGS*
Ga0105095_1047896023300009053Freshwater SedimentMDMLLGGLAFVAIIFGQFVAVVADRKRKSPEQETLALPHHDYRARLIWHAGG*
Ga0105107_1015576423300009087Freshwater SedimentMDMLLGGLAFVAIIFGQFAAVVAVVTDRKRKSPEQETLALPHHDYRARLIWHAGG*
Ga0111539_1026169433300009094Populus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASTPPHLDHRARLIWESGS*
Ga0111539_1082022223300009094Populus RhizosphereMDILLGGLAFAAIILGQGRAVKKNHGERKSRESDALSPTRLDDRTKLIWRCGS*
Ga0105245_1247352223300009098Miscanthus RhizosphereMDMALGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS*
Ga0075418_1138656613300009100Populus RhizosphereMDILLGGLAFAAIILGQFAAVIAVHGERKSREADALSPTRFDDRAKLIWQSGS*
Ga0075418_1179089923300009100Populus RhizosphereMDMLLGGLAFAAIILGKFAAVLAVHGERKSRESDALSPMHLDDRTKLIWQSGS*
Ga0075418_1239909723300009100Populus RhizosphereMDILLGGLAFGAIMFGQFAAVVAVHRERKIRESEAVAPPPLDHRTRLIWDSGS*
Ga0075418_1317382923300009100Populus RhizosphereDMLLGALAFAAIILGQFAAVVAVHRERTSRESNALSPTHLDDREKLIWQSGS*
Ga0114129_1189037223300009147Populus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPHLDYRARLIWESGS*
Ga0105243_1015786833300009148Miscanthus RhizosphereMDTLLGGIAFAAIIFGHLAAVVAVHGERKNRESEAAAPPHFDHRAMLIWHSGS*
Ga0105243_1179621023300009148Miscanthus RhizosphereMDMALVGLAFAAIIFGQFAAVVAVHGERKRREAEAPALPRLDHRARLIWESAS*
Ga0105243_1222104613300009148Miscanthus RhizosphereMDLLLGGLAFAVIIFGQFAAVVAVHDEGKSRQPEAFDAYRTRLIWDSGN*
Ga0111538_1283486623300009156Populus RhizosphereAFAGIILAQFAAVVAVHGERKSRESDALSPTRLDDRTKLIWRCGS*
Ga0075423_1284844223300009162Populus RhizosphereLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASTPPHLDDRARLIWESGS*
Ga0105242_1074521413300009176Miscanthus RhizosphereMDMLLGGLAFAVIILGQFAAVVAVHGERKRCESEASSPPHLDHRARLIWDSGSSQCAPASQSR*
Ga0105249_1200432023300009553Switchgrass RhizosphereMDMLLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASTPPHLDHRARLIWESAS*
Ga0134127_1181002133300010399Terrestrial SoilMDMLLGGLAFAAIIFGQFAAVVAVHDEGKSRQPEAFDAYRTRLIWDSGN*
Ga0134122_1066206823300010400Terrestrial SoilMKMDTLLGGLAFAMIIFGQFAAIIAVHGEKTRRDPDTSALPHLDDCARLVWHGS*
Ga0134122_1082760433300010400Terrestrial SoilMDMALGGLAFAAIIFGQFAAVVAVHRERTSREAQAADLPDLDPRARLIWHGN*
Ga0157296_1014798733300012905SoilMDMLLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPYLDHRARLIWESGS*
Ga0157301_1026981113300012911SoilMDMLLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPHLDCRARLIWEAGS*
Ga0157297_1035073613300012914SoilMDTLLGGLAFAGIILAQFAAVVAVHGERKSRESDALSPTRLDDRTKLIWRCGS*
Ga0163162_1087514623300013306Switchgrass RhizosphereMDMVLGGLAFAAIIFGQFAAAVAVHGERKRREAEAPALPRLDHRARLIWESAS*
Ga0157375_1338991123300013308Miscanthus RhizosphereMDMLLGGLAFAALILGRFAAVIKVHGKRKSRETDALSPMRLDDRTKLIWQSGS*
Ga0157380_1131531923300014326Switchgrass RhizosphereMDMLLGGLAFAAIILGQFAAVVAVHRERTIRESDALSPTHLDNREKLIWQSGS*
Ga0157379_1076456023300014968Switchgrass RhizosphereMDMALGGLAFAAIIFGQFAAVVAVHGERKNRESEASAPQNFDHRTRLIWHSGS*
Ga0157376_1052831323300014969Miscanthus RhizosphereMDMLLGGLAFAAIIFGQFAAVIAVHGERKSRESDALNPTRLDDRTKLIWQSGS*
Ga0173478_1062489313300015201SoilMDMLLGGLAFAAIIFGQFAAVIAVHGERKSRESDALSPTRLDDRTKLIWQSGS*
Ga0132258_1130551133300015371Arabidopsis RhizosphereMDTLLGGLAFAGIILAQFAAVVAVHGERKSRESDALSPTRLDDRTKLIWQCGS*
Ga0163161_1059509733300017792Switchgrass RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGERKRREAEAPALPRLDHRARLIWESAS
Ga0184635_1033802923300018072Groundwater SedimentMDMLLGGLAFAAIIFAQFAAVVAVHGERKRRESEASPPPQLDDRARLIWDFGS
Ga0184624_1006695333300018073Groundwater SedimentMDMLLGGLAFAAIIFAQFAAVVAVHGERKRRESEASSPPQLDHRAMVIWDSGS
Ga0184624_1035844723300018073Groundwater SedimentMDMLLGGLAFAAIIFGQFAAVIAVHGERKSRESDALNPTRLDDRTKLIWQSGS
Ga0190275_1009826923300018432SoilVDMLLGGLAFAAIILGQFAAVLAVHGERKSRESDALSPTRFDDRTKLIWQSGS
Ga0190275_1028733523300018432SoilMDMLLGGLAFGAIIFGQFAAVIAVHGERKCRESETFAPPHVDHRTRLIWECGS
Ga0190275_1030781833300018432SoilMDMLLGGVAFAAIILGQLAAVIAVHGERKRHESEAFALPHVNHRTRLIWECGS
Ga0190270_1040655823300018469SoilMDMLLGGLAFAAIILGQFAAVIAVHGERKSRESDALSPMHLDDRTKLIWQCGS
Ga0190270_1085503623300018469SoilMDMLLGGLAFGAIIFGQFAAVIAVHGERKRRESEAFAPPHVGHRTKLIWECGS
Ga0190270_1124183833300018469SoilMDMLLGGLTFAAIILGQFAAVIAVHGERKRRESDALSPTHLDRTKLIWQSGS
Ga0190270_1130699923300018469SoilMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEAPAPQNLDHRTRLIWDSGS
Ga0190270_1241514823300018469SoilMDMLLGGLAFTAVILGQFAAVIAVYGERKRRESDALSPTHLDDRTKLIWQSGS
Ga0190274_1049619633300018476SoilMDMMLGGLAFAAIILGQFAAVIAVHSERKRRESDALSPTHLDDRTKLIWQSGS
Ga0190274_1071336823300018476SoilMDMLLGGLAFAAIILGQFAAVVAVHGERKRRESDALSPMHLDDRAKLIWQSGS
Ga0190274_1206822813300018476SoilMDMLLGGLAFAAIILGQFAAVIAVHSERKSRESDALSPTRLDDRTKLIWQSGS
Ga0190274_1321867713300018476SoilMDMLLGGLAFAVIIFGQFAAVVAVHRERKSRESVAVAQPHLDHRARLIWDFGS
Ga0190274_1375994623300018476SoilMDMLLGGLAFAAIILGQFAAVIAVHGERTSRESEASAPQNLDYRTRLIWDSGG
Ga0190271_1026516033300018481SoilMDMLLGGLAFGAIIFGQFAAVIAVHGERKCRESEAFAPPHVDHRTRLIWESGS
Ga0190271_1035720823300018481SoilMDMLLGGLAFAAIIFGQFAAVIAVHGERKSREFEAFSPPHVDHRTRLIWECGS
Ga0190271_1095679833300018481SoilMDMLLGGLAFAAIILGQFAAVIAVQGERKRRESDALRPTHFDDRTKLIWQSGS
Ga0190271_1097349433300018481SoilMDMLLGGLAFAAIILGQFAAVIAVHGERKSRESDALSPMHLDDRTKLIWQSGS
Ga0190271_1189776513300018481SoilAFAAIILGQFAAVVAVHGERKIRESDALSPTRLDDRTKLIWQSGS
Ga0190271_1340245423300018481SoilMDMLLGGLAFAAIIFGQFAAVIAVHGERKRRQSDASNPLQFDHRTQLIWNSGS
Ga0190271_1379457513300018481SoilMDMLLGGLAFASIILGHFAAVIAVHGERKRQESDALSPTHLDDRTKLIWQ
Ga0173482_1041846713300019361SoilMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPQLDHRAMVIWDSGS
Ga0173479_1076600213300019362SoilMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPQLDDRARLIWDFGS
Ga0190264_1087087623300019377SoilGQFAAAVAVHGERKRRESDALSPMHLDDRAKLIWQAGS
Ga0207697_1024210523300025315Corn, Switchgrass And Miscanthus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPQLDDRARLIWDSGS
Ga0207682_1022669913300025893Miscanthus RhizosphereMDMLLGGLAFAAIIFAQFAAVVAVHGERKRRESEASSPPHLDHRARLIWDSGSSQCAPASQSR
Ga0207682_1041384523300025893Miscanthus RhizosphereMDMLLVGLAFAAIILGQFAAVIAVHGERKSRESDALTPTRLDDRAKLIWQSGS
Ga0207688_1023532813300025901Corn, Switchgrass And Miscanthus RhizosphereMDMALGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPQLDHRAMVIWDSGS
Ga0207688_1065693623300025901Corn, Switchgrass And Miscanthus RhizosphereMDMLLGGLAFAAIIFGQFAAVIAVHGARKGRESDASEGLQFDHRTRLIWNSGS
Ga0207647_1053112313300025904Corn RhizosphereHRTSEERTMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWESG
Ga0207645_1027326723300025907Miscanthus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGERKRRESEASAPQNLDHRTRLIWDSGS
Ga0207643_1024820223300025908Miscanthus RhizosphereMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASAPQNLDHRTRLIWDSGS
Ga0207662_1074072923300025918Switchgrass RhizosphereMDLLLGGLAFAAIVFGQVAAVVAVHGEGKRREAEASAPPHLDHRARLIWESGS
Ga0207681_1012324423300025923Switchgrass RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPYLDHRARLIWESGS
Ga0207681_1170958223300025923Switchgrass RhizosphereMDMLLGGLAFAVIILGQFAAVIAVHGARKGRESDASDRLPFDHRTRLIWNSGS
Ga0207659_1069646133300025926Miscanthus RhizospherePSSHRTSEESTMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPQLDDRARLIWDFGS
Ga0207659_1142019523300025926Miscanthus RhizosphereMDTLLGGLAFAGIILAQFAAVVAVHGERKSRESDALSPTRLDDRTKLIWRCGS
Ga0207701_1006770323300025930Corn, Switchgrass And Miscanthus RhizosphereMDMLLGGLAFAAIIFAQFAAVVAVHGERKRRESEASSPPQLDDRARLIWDSGS
Ga0207701_1028754533300025930Corn, Switchgrass And Miscanthus RhizosphereMDMLLGGLAFAAIIFGQFAAVIAVHGERKSRESDALSPTRLDDRTKLIWRCGS
Ga0207706_1139601323300025933Corn RhizosphereRENAMDMVLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPYLDHRARLIWESGS
Ga0207709_1043210723300025935Miscanthus RhizosphereMDMALVGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS
Ga0207670_1092656713300025936Switchgrass RhizosphereMDLLLGGLAFAAIIFGQFAAVVAVHDEGKSRQPEAFDAYRTRLIWDSGN
Ga0207670_1177257313300025936Switchgrass RhizosphereMDMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDDRARLIWDFGS
Ga0207669_1005357833300025937Miscanthus RhizosphereMDMLLVGLAFAAIILGQFAAVIAVHGERKSRESDALTPTRLDDRAKLIWQSGG
Ga0207669_1069180323300025937Miscanthus RhizosphereMDMLLGGVAFAALILGQFAAVIAVQGERKRRESEALAPPHLDHRARLIWESGS
Ga0207669_1070540933300025937Miscanthus RhizosphereGQFQEESAMDMLLGGLAFAAIIFGQFAAVVAVHGERKSREFEAFSPPHADHHTRLIWECG
Ga0207704_1160838523300025938Miscanthus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASTPPHLDHRARLIWESAS
Ga0207691_1071289623300025940Miscanthus RhizosphereMDTLLGGLAFAGIILAQFAAVVAVHGERKRCESEASSPPHLDDRARLIWDFGS
Ga0207679_1049702013300025945Corn RhizosphereMEMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASAPQNLDHRTRLIWDSGG
Ga0207708_1076728923300026075Corn, Switchgrass And Miscanthus RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGERKRREAEAPALPRLDHRARLIWESGS
Ga0207674_1026194343300026116Corn RhizosphereMDMVLGGLAFAAIIFGQFAAVVAVHGEGKRREAEASAPPHLDHRARLIWESGS
Ga0207675_10252219723300026118Switchgrass RhizosphereMDMLLGGLAFAAIIFAQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS
Ga0207683_1072204413300026121Miscanthus RhizosphereGLAFAAIIFGQFAAVVAVHGERKRREAEAPALPRLDHRARLIWESAS
Ga0207683_1082103323300026121Miscanthus RhizosphereMEMLLGGLAFAAIIFGQFAAVVAVHGERKRRESEASSPPHLDHRARLIWNSGS
Ga0207683_1170179523300026121Miscanthus RhizosphereMDMLLGGLAFAAIIFGQFAAVIAVHGERKSRESDALSPMRLDDRTKLIWQSGS
Ga0207428_1033284933300027907Populus RhizosphereRQDAFRENTMDMVLGGLAFAAIIFGQFAAVVAVHGERKRREAEAPALSRLDHRARLIWESGS
Ga0247820_1134963223300028597SoilMDILLGGLAFGAIMFGQFAAVVAVHRERKIRESEAVAPPPLDHRTRLIWDSGS
Ga0307503_1069145023300028802SoilQESTMEMFLGGLAFAALIFAQFAAVVAVHGERKSRESEASDPPQLDPRARQIWDSGS
Ga0310887_1054238523300031547SoilMDMLLGGLAFAAIIFGQFAAVVAVHAERRRRESKASVPQNLDHRTRLIWDSGS
Ga0307468_10046527633300031740Hardwood Forest SoilDMVLGGLAFAAIIFGQFAAVVAVYGERKRREAEAPVQPHLDAAQPHLDHRARLIWESGS
Ga0307468_10183964323300031740Hardwood Forest SoilMDMLLGGLAFAAIIFGQFAAVIAVHGARKGRELDASDRLPFDHRTRLIWNSGS
Ga0307470_1019315723300032174Hardwood Forest SoilMDMVLGGLAFAAIIFGQFAAVVAVHREGKRREAEASAPLHLDHRARLIWESGS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.