Metagenome / Metatranscriptome Family F050456

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050456
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	46 residues
Representative Sequence	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGANKVFGWA
Number of Associated Samples	136
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.72 %
% of genes near scaffold ends (potentially truncated)	97.24 %
% of genes from short scaffolds (< 2000 bps)	88.97 %
Associated GOLD sequencing projects	133
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.931 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.310 % of family members)
Environment Ontology (ENVO)	Unclassified (27.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.552 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.72% β-sheet: 12.68% Coil/Unstructured: 67.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00571	CBS	46.21
PF08495	FIST	15.86
PF04237	YjbR	11.72
PF10442	FIST_C	8.28
PF13489	Methyltransf_23	1.38
PF12706	Lactamase_B_2	1.38
PF01625	PMSR	1.38
PF07973	tRNA_SAD	0.69
PF13673	Acetyltransf_10	0.69
PF00296	Bac_luciferase	0.69
PF13189	Cytidylate_kin2	0.69
PF03625	DUF302	0.69
PF01810	LysE	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG3287	FIST domain protein MJ1623, contains FIST_N and FIST_C domains	Signal transduction mechanisms [T]	15.86
COG4398	Small ligand-binding sensory domain FIST	Signal transduction mechanisms [T]	15.86
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	11.72
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	1.38
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.69
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.93 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.93 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.93 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	69.66 %
Unclassified	root	N/A	2.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	68.28 %
Unclassified	root	N/A	2.07 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	51.03 %
Unclassified	root	N/A	2.07 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	48.28 %
Unclassified	root	N/A	2.07 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	48.28 %
Unclassified	root	N/A	2.07 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c1039331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300000156\|NODE_c0738519	All Organisms → cellular organisms → Bacteria	11538	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101115662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300000880\|AL20A1W_1248535	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300000891\|JGI10214J12806_10548579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1566	Open in IMG/M
3300000891\|JGI10214J12806_10710234	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300000953\|JGI11615J12901_11673129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300000956\|JGI10216J12902_109903230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300001334\|A2165W6_1021791	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300001686\|C688J18823_10155879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1564	Open in IMG/M
3300004114\|Ga0062593_100926567	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300004480\|Ga0062592_100708295	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300004643\|Ga0062591_101443475	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005171\|Ga0066677_10449294	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005172\|Ga0066683_10468634	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005329\|Ga0070683_101901652	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005332\|Ga0066388_100124993	All Organisms → cellular organisms → Bacteria	3105	Open in IMG/M
3300005335\|Ga0070666_10520082	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005337\|Ga0070682_100113907	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300005437\|Ga0070710_10681521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300005441\|Ga0070700_101063165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300005445\|Ga0070708_101167560	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005450\|Ga0066682_10378795	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005535\|Ga0070684_100581294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300005543\|Ga0070672_100390462	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300005545\|Ga0070695_100590326	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005553\|Ga0066695_10689751	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005553\|Ga0066695_10852204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	523	Open in IMG/M
3300005556\|Ga0066707_10420812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	868	Open in IMG/M
3300005558\|Ga0066698_10527939	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005560\|Ga0066670_10042522	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300005566\|Ga0066693_10010653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2585	Open in IMG/M
3300005569\|Ga0066705_10660196	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005587\|Ga0066654_10527312	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005764\|Ga0066903_100729534	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300006028\|Ga0070717_10134664	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300006237\|Ga0097621_100041760	All Organisms → cellular organisms → Bacteria	3693	Open in IMG/M
3300006755\|Ga0079222_10888834	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006804\|Ga0079221_10981734	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300006806\|Ga0079220_11043036	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300006881\|Ga0068865_100105026	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300007821\|Ga0104323_113347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1271	Open in IMG/M
3300009012\|Ga0066710_100380990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2096	Open in IMG/M
3300009093\|Ga0105240_10653089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1152	Open in IMG/M
3300009100\|Ga0075418_11679688	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009137\|Ga0066709_104140441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300009148\|Ga0105243_10021607	All Organisms → cellular organisms → Bacteria	4885	Open in IMG/M
3300009148\|Ga0105243_10187030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1806	Open in IMG/M
3300009148\|Ga0105243_12720296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300009162\|Ga0075423_11374976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300009545\|Ga0105237_12541788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300010040\|Ga0126308_10009152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4906	Open in IMG/M
3300010145\|Ga0126321_1033508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300010320\|Ga0134109_10125127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300010326\|Ga0134065_10320726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300010337\|Ga0134062_10611338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300010360\|Ga0126372_11374667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300010371\|Ga0134125_10661384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1153	Open in IMG/M
3300010373\|Ga0134128_12102308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300010375\|Ga0105239_10226637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2097	Open in IMG/M
3300010396\|Ga0134126_12610868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300010398\|Ga0126383_13172778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300010400\|Ga0134122_10452745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1149	Open in IMG/M
3300011996\|Ga0120156_1068866	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300011999\|Ga0120148_1063680	Not Available	733	Open in IMG/M
3300012206\|Ga0137380_11151411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300012207\|Ga0137381_10854215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300012210\|Ga0137378_10877787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300012211\|Ga0137377_10410201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1293	Open in IMG/M
3300012211\|Ga0137377_11803377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300012356\|Ga0137371_10158486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1775	Open in IMG/M
3300012356\|Ga0137371_11186501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300012360\|Ga0137375_10855757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300012507\|Ga0157342_1068939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300012508\|Ga0157315_1055187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300012532\|Ga0137373_10114665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2328	Open in IMG/M
3300012955\|Ga0164298_10229879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1105	Open in IMG/M
3300012958\|Ga0164299_10336599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	943	Open in IMG/M
3300012961\|Ga0164302_10664634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300012977\|Ga0134087_10247390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	816	Open in IMG/M
3300012984\|Ga0164309_10858819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300012986\|Ga0164304_10668169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300013102\|Ga0157371_11093514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300013307\|Ga0157372_10565853	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300013308\|Ga0157375_13224390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300014157\|Ga0134078_10353835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300017654\|Ga0134069_1112697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	892	Open in IMG/M
3300017939\|Ga0187775_10049827	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300018061\|Ga0184619_10115963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1211	Open in IMG/M
3300018066\|Ga0184617_1259025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300018081\|Ga0184625_10358177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300018465\|Ga0190269_10388934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300018482\|Ga0066669_12143031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300019869\|Ga0193705_1057310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300020022\|Ga0193733_1042620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300021080\|Ga0210382_10030422	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300022694\|Ga0222623_10122634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1012	Open in IMG/M
3300022756\|Ga0222622_10726052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300022893\|Ga0247787_1044224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300022915\|Ga0247790_10000882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5908	Open in IMG/M
3300023071\|Ga0247752_1000962	All Organisms → cellular organisms → Bacteria	3614	Open in IMG/M
3300024224\|Ga0247673_1011124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1159	Open in IMG/M
3300024286\|Ga0247687_1012165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1168	Open in IMG/M
3300024310\|Ga0247681_1023023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M
3300025901\|Ga0207688_10833730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300025915\|Ga0207693_10125841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2015	Open in IMG/M
3300025921\|Ga0207652_11065567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300025931\|Ga0207644_11707369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300025935\|Ga0207709_10928524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300025944\|Ga0207661_11446710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300025949\|Ga0207667_11645592	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300025960\|Ga0207651_11191690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300026088\|Ga0207641_12102322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300026118\|Ga0207675_100254483	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300026306\|Ga0209468_1139766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300026308\|Ga0209265_1136456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300026550\|Ga0209474_10394939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300027907\|Ga0207428_10967560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300028281\|Ga0247689_1025013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300028704\|Ga0307321_1081669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300028708\|Ga0307295_10129349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300028711\|Ga0307293_10043113	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300028713\|Ga0307303_10143641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300028714\|Ga0307309_10009213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1739	Open in IMG/M
3300028715\|Ga0307313_10021012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1774	Open in IMG/M
3300028715\|Ga0307313_10183047	Not Available	649	Open in IMG/M
3300028716\|Ga0307311_10169513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300028719\|Ga0307301_10065508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300028784\|Ga0307282_10183781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300028784\|Ga0307282_10590800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300028793\|Ga0307299_10286435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300028796\|Ga0307287_10374019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300028807\|Ga0307305_10172181	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300028819\|Ga0307296_10080615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1734	Open in IMG/M
3300028872\|Ga0307314_10197151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300028872\|Ga0307314_10316030	Not Available	501	Open in IMG/M
3300028876\|Ga0307286_10334632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300030511\|Ga0268241_10093706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300031091\|Ga0308201_10120122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300031901\|Ga0307406_11056305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300031996\|Ga0308176_10248141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1705	Open in IMG/M
3300032004\|Ga0307414_10695154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300032013\|Ga0310906_10362996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300032770\|Ga0335085_10537198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1327	Open in IMG/M
3300034819\|Ga0373958_0105670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	19.31%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.17%
Plants	Host-Associated → Plants	19.31%
Aquatic	Environmental → Aquatic	4.83%
Solid Waste	Engineered → Solid Waste	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.83%
Sediment	Environmental → Aquatic → Sediment	3.45%
Freshwater	Environmental → Aquatic → Freshwater	1.38%
Roots	Host-Associated → Plants → Roots	0.69%
Grass	Engineered → Solid Waste → Grass	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.45%
Loam	Environmental → Terrestrial → Soil → Loam	10.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%
Composting	Engineered → Solid Waste → Grass → Composting	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.14%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.07%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.07%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.07%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007821	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 Soapdenovo	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_10393312	2228664021	Soil	VRKATIERRITELALSFPESYEDRPWGDFPVFKVGQNKVFGWMVT
NODE_07385199	3300000156	Sugar Cane Bagasse Incubating Bioreactor	VRKATLERRITELALSFPEAYEDRPWGDFPVFKVGKNKVFGWLVADENGVRV
INPhiseqgaiiFebDRAFT_1011156621	3300000364	Soil	VPFRPKTAIRRVRELALSFPQAYEDDPWGFPVFKVA
AL20A1W_12485353	3300000880	Permafrost	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGANKVFGWAQVEGGAVHVTVS*
JGI10214J12806_105485794	3300000891	Soil	MRVAAIERRITEEALSFPESYEDRPWGDFPVFKVGE
JGI10214J12806_107102341	3300000891	Soil	VRKTTIERRITELALSFPEAYEDRPWGDFPVFKVG
JGI11615J12901_116731292	3300000953	Soil	VRVAAIERRITEEALSFPESYEDRPWGDFPVFKVGENK
JGI10216J12902_1099032302	3300000956	Soil	VRLKAIEEQIRSSALAFPGTYEDRPWGDFPVFKVGE
A2165W6_10217911	3300001334	Permafrost	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGANKVFGWAQVEGGAVHVTVKLT
C688J18823_101558791	3300001686	Soil	MRVATIERRITELALSFPEAYEDRPWGDFPVFKVGDNKVFA
Ga0062593_1009265671	3300004114	Soil	MRVAAIERRITEEALSFPESYEDRPWGDFPVFKVGENKVF
Ga0062592_1007082951	3300004480	Soil	VRLEQIEARIREVALGFPESYEDHPWGDFPVFKVGQNKVFGW
Ga0062591_1014434752	3300004643	Soil	MRRDELARLRQIEAKIHEVALGFPEAYEDRPWGDFPVFKV
Ga0066677_104492941	3300005171	Soil	VRLQAIEERVKETALGFPQAYEDRPWGDFPVFKVGQNKVFGWAVVRD
Ga0066683_104686343	3300005172	Soil	VRLSTIERRIHDLALSFPETYEDRPWGDFPVFKVGENKVFGWA
Ga0070683_1019016522	3300005329	Corn Rhizosphere	MRAATIERKVKELALSFPEAYEDRPWGDFPVFKVGDNKVFGWAVTRDGAVDV
Ga0066388_1001249934	3300005332	Tropical Forest Soil	VRVSAIKRRITEVALSFPQSYEDRPWGDFPVFKVGENKVF
Ga0070666_105200821	3300005335	Switchgrass Rhizosphere	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAIT
Ga0070682_1001139071	3300005337	Corn Rhizosphere	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAVAREESVDVTVKL
Ga0070710_106815213	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VVGTAFEQRIRELALSFPETYEDHPWGDFPVFKVGDNKVFAW
Ga0070700_1010631651	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLGEALEERIRELALSFPETYEDHPWGDFPVFKVGSNKVFAWL
Ga0070708_1011675601	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MESTTPAERQNAAVRLKAIEERITELALGFPQTYEDRPWGDFPVYKVG
Ga0066682_103787953	3300005450	Soil	MRLQAIEERIVELALGFPQAYEDRPWGDFPVFKVGENRVFGWAVVEDGAVHVTVKLTAEERD
Ga0070684_1005812941	3300005535	Corn Rhizosphere	VRNGQNAAVRTATIERRITELALSFPEAYEDRPWGDFPVFKVGQ
Ga0070672_1003904622	3300005543	Miscanthus Rhizosphere	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKV
Ga0070695_1005903261	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VRLATIERRIKDAALAFPEAYEDRPWGDFPVFKVGQNKVFGWA
Ga0066695_106897511	3300005553	Soil	VRLEVIEERIKDLALGFPQAYEDRPWGDFPVFKVGENKVFGWAV
Ga0066695_108522042	3300005553	Soil	VRLSTIERRIHDLALSFPETYEDRPWGDFPVFKVGENKVFGWAVVEDGAVH
Ga0066707_104208121	3300005556	Soil	VRLELIEERIKELALGFPQAYEDRPWGDFPVFKVGENKVFG
Ga0066698_105279391	3300005558	Soil	MRLNAIERRIRDLALSFPEAYEDRPWGDFPVFKVGENKVFGWAVAE
Ga0066670_100425221	3300005560	Soil	VRGTAIEERIRELALSFPETYEDHPWGDFPVFKVGA
Ga0066693_100106531	3300005566	Soil	VLGTAIEARIRELALSFPETYEDHPWGDFPVFKVG
Ga0066705_106601961	3300005569	Soil	VRLATIEERIHDLALGFPEAYEDRPWGDFPVYKVGENKVFGW
Ga0066654_105273122	3300005587	Soil	VRGTAIEERIRELALSFPETYEDHPWGDFPVFKVGSN
Ga0066903_1007295341	3300005764	Tropical Forest Soil	MRGTAIEDRIRELALSFPETYEDHPWGDFPVFKVG
Ga0070717_101346643	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGENKVFGWVVA
Ga0097621_1000417606	3300006237	Miscanthus Rhizosphere	VRTATIERRITELALSFPEAYEDRPWGNFPVFKVGQNKVFGWVVAREESV
Ga0079222_108888341	3300006755	Agricultural Soil	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVF
Ga0079221_109817341	3300006804	Agricultural Soil	MRAVRLGAIEQRITELALGFPQAYEDRPWGDFPVFKVGDNKVF
Ga0079220_110430361	3300006806	Agricultural Soil	VRASTIERRIIELALSFPEAYEDRPWGDFPVFKVGQNKVFGW
Ga0068865_1001050261	3300006881	Miscanthus Rhizosphere	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAITRDGAV
Ga0104323_1133471	3300007821	Soil	VSSRNRENGAVRTATIERRITELALSFPQSYEDRPWGDFPVFKVGENKVFG
Ga0066710_1003809904	3300009012	Grasslands Soil	VRLEVIEERIKDLALGFPQAYEDRPWGDFPVFKVGENKVFGWAVVDDGAVHVT
Ga0105240_106530894	3300009093	Corn Rhizosphere	LATIERRIKDAALAFPEAYEDRPWGDFPVFKVGQNKVFGWAVTREESVDVTMKLTAE
Ga0075418_116796881	3300009100	Populus Rhizosphere	VRKTTIERRITELALSFPEAYEDRPWGDFPVFKVGQNKV
Ga0066709_1041404411	3300009137	Grasslands Soil	VRLELIEERIKELALGFPQAYEDRPWGDFPVFKVGENKVFGWAVVDDGAVHVT
Ga0105243_100216078	3300009148	Miscanthus Rhizosphere	VRTATIERRITELALSFPEAYEDRPWGNFPVFKVGQNKVFGWAIVRDG
Ga0105243_101870304	3300009148	Miscanthus Rhizosphere	VRAATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAIVRDGAVDVT
Ga0105243_127202962	3300009148	Miscanthus Rhizosphere	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAITRDGAVDVTV
Ga0075423_113749761	3300009162	Populus Rhizosphere	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGENKVFGWAQVAEGAVHVTV
Ga0105237_125417882	3300009545	Corn Rhizosphere	MRAATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAITRDGAV
Ga0126308_100091521	3300010040	Serpentine Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQVEDGA
Ga0126321_10335081	3300010145	Soil	MGGVRTATIQRRITELALSFPEAYEDRPWGDFPVFKVGANKVF
Ga0134109_101251273	3300010320	Grasslands Soil	VRLATIEERIRELALGFPESYEDRPWGDFPVYKVGENKVFGW
Ga0134065_103207262	3300010326	Grasslands Soil	VRLSTIERRIRELALGFPEAYEDRPWGDFPVYKVGQNKVFGWAIVRDGSVDVTLKL
Ga0134062_106113381	3300010337	Grasslands Soil	VRLEVIEERLNDLALGFPQAYEDRPWGDFPVFKVGENKVFGWA
Ga0126372_113746672	3300010360	Tropical Forest Soil	VRVATIERRVTELALSFPESYEDRPWGDFPVFKVGENKVF
Ga0134125_106613841	3300010371	Terrestrial Soil	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAITR
Ga0134128_121023081	3300010373	Terrestrial Soil	VVGTAIEQRMRELALSFPETYEDHPWGDFPVFKVG
Ga0105239_102266374	3300010375	Corn Rhizosphere	MRAVRKTTIERRITELALSFPEAYEDRPWGDFPVFKVGENKVFGWMV
Ga0134126_126108682	3300010396	Terrestrial Soil	VTLEDLAAEIHGLALSFPEAHEDRPWGDLPVYKVGENRVFAWAVRDDACVRVTLKLTP
Ga0126383_131727782	3300010398	Tropical Forest Soil	VRGTAIEERIRVLALSFPETYEDHPWGDFPVFKVGANKV
Ga0134122_104527451	3300010400	Terrestrial Soil	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAITRDG
Ga0120156_10688663	3300011996	Permafrost	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGANKVFGWAQVEGGAVHV
Ga0120148_10636801	3300011999	Permafrost	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGANKVFGWA
Ga0137380_111514111	3300012206	Vadose Zone Soil	VRLKAIEERITELALGFPEAYEDRPWGDFPVFKVGE
Ga0137381_108542153	3300012207	Vadose Zone Soil	VLGESIEQRIRELALSFPETYEDHPWGDFPVFKVG
Ga0137378_108777871	3300012210	Vadose Zone Soil	VLGESIEQRIRELALSFPETYEDHPWGDFPVFKVGENKV
Ga0137377_104102011	3300012211	Vadose Zone Soil	VLGESIEQRIRELALSFPETYEDHPWGDFPVFKVGENK
Ga0137377_118033771	3300012211	Vadose Zone Soil	VRLATIEKRIKELALGFPEAYEDRPWGDFPVFKVGENKVFG
Ga0137371_101584863	3300012356	Vadose Zone Soil	VRLEAIEQRITELALSFPEAYEDRPWGDFPVFKVGD
Ga0137371_111865011	3300012356	Vadose Zone Soil	VRLATIEERIRELALGFPEAYEDRPWGDFPVYKVGENKVFGWAIVRDESVDVTVKLT
Ga0137375_108557573	3300012360	Vadose Zone Soil	VRTATIERRISELALSFPESYEDRPWGDFPVFKVGA
Ga0157342_10689392	3300012507	Arabidopsis Rhizosphere	VRTTAIERRITELALSFPESYEDRPWGDFPVFKVGQNKVFGWVVAREESVDVTVKLTA
Ga0157315_10551872	3300012508	Arabidopsis Rhizosphere	VLKATIERRITELALSFPESYEDRPWGDFPVFKVGQNKVFGWMVT
Ga0137373_101146655	3300012532	Vadose Zone Soil	VRTATIERRISELALSFPESYEDRPWGDFPVFKVGANKVFGWAQV
Ga0164298_102298791	3300012955	Soil	VVGTAIEQRIRELALSFPETYEDHPWGDFPVFKVGDNKVFAW
Ga0164299_103365992	3300012958	Soil	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAVTRDGAVDVTVKLTL
Ga0164302_106646341	3300012961	Soil	VVGTAIEQRVRELALSFPETYEDHPWGDFPVFKVGDNKVFAWL
Ga0134087_102473901	3300012977	Grasslands Soil	VRLATIEERIRDLALGFPEAYEDRPWGDFPVYKVGENRVF
Ga0164309_108588191	3300012984	Soil	MRPATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAVTR
Ga0164304_106681692	3300012986	Soil	MRPATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAVT
Ga0157371_110935142	3300013102	Corn Rhizosphere	LATIERRIKDAALAFPEAYEDRPWGDFPVFKVGQNKVFGWAVTREDSVDVTMKLT
Ga0157372_105658531	3300013307	Corn Rhizosphere	VRNGQNAAVRTATIERRITELALSFPEAYEDRPWGDFPVFK
Ga0157375_132243902	3300013308	Miscanthus Rhizosphere	MLGEALEARIRELALSFPETYEDHPWGDFPVFKVGSNKVF
Ga0134078_103538351	3300014157	Grasslands Soil	VRLSTIERRIHDLALSFPETYEDRPWGDFPVFKVGENKVFCWAVAQDGA
Ga0134069_11126971	3300017654	Grasslands Soil	VRLSTIERRIYDLALSFPEAYEDRPWGDFPVFKVGQN
Ga0187775_100498273	3300017939	Tropical Peatland	VRLATIEERIRELALGFPEAYEDRPWGDFPVYKVGENKVFGWAIVRDGSVDVTVKLTHEE
Ga0184619_101159631	3300018061	Groundwater Sediment	MLGTAIETRIRELALSFPATYEDHRWGDFPVFKVGENK
Ga0184617_12590252	3300018066	Groundwater Sediment	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQVEDGAVHLTVKRTAEE
Ga0184625_103581771	3300018081	Groundwater Sediment	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQVE
Ga0190269_103889341	3300018465	Soil	VRKATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAV
Ga0066669_121430312	3300018482	Grasslands Soil	VRLSTIERRIYDLALSFPEAYEDRPWGDFPVFKVGQNKVFGWAVAENGAVHVTV
Ga0193705_10573101	3300019869	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGA
Ga0193733_10426201	3300020022	Soil	VRLATIEERIRELALGFPEAYEDRPWGDFPVYKVGESKVFGWAI
Ga0210382_100304225	3300021080	Groundwater Sediment	MLGTVIETRIRELALSFPATYEDHPWGDFPVFKVGENKVFAWLTI
Ga0222623_101226344	3300022694	Groundwater Sediment	VRKATIERRITALALSFPEAYEDRPWGDFPVFKVGQN
Ga0222622_107260521	3300022756	Groundwater Sediment	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQVEGGAVHVTVK
Ga0247787_10442242	3300022893	Soil	VRKTTIERRITELALSFPEAYEDRPWGDFPVFKVGENKVFGWMVTRDDSVDL
Ga0247790_100008821	3300022915	Soil	VRKTTIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGWMVTRDDSVDLTLK
Ga0247752_10009626	3300023071	Soil	VRKTTIERRITELALSFPEAYEDRPWGDFPVFKVGENKVFG
Ga0247673_10111241	3300024224	Soil	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFG
Ga0247687_10121652	3300024286	Soil	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGEN
Ga0247681_10230231	3300024310	Soil	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAVRREDRVDVTMKL
Ga0207688_108337301	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAITRDGAVDVTVKLT
Ga0207693_101258413	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VGQNGPVRMATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGW
Ga0207652_110655671	3300025921	Corn Rhizosphere	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGWA
Ga0207644_117073691	3300025931	Switchgrass Rhizosphere	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFAWAVTR
Ga0207709_109285241	3300025935	Miscanthus Rhizosphere	VRAATIERKITELALSFPEAYEDRPWGDFPVFKVGQNKVFGW
Ga0207661_114467102	3300025944	Corn Rhizosphere	MRAATIERKVKELALSFPEAYEDRPWGDFPVFKVGDNKVFGWAVTRDGAVDVT
Ga0207667_116455921	3300025949	Corn Rhizosphere	VRTATIERRITELALSFPEAYEDRPWGNFPVFKVGQNKVFGWAIVRDGAVDVTVK
Ga0207651_111916901	3300025960	Switchgrass Rhizosphere	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGWVVAREESVDVTVKL
Ga0207641_121023221	3300026088	Switchgrass Rhizosphere	MRAATIERKVKELALSFPEAYEDRPWGDFPVFKVGDNKVFGWAVTRDGAVDVTVKL
Ga0207675_1002544831	3300026118	Switchgrass Rhizosphere	VRAATIERKVTELALSFPEAYEDRPWGDFPVFKVGQNKVFGW
Ga0209468_11397661	3300026306	Soil	MQGTAIEARIRELALSLPKTYEDHPWGDFPVFKVGANKVFAWLT
Ga0209265_11364562	3300026308	Soil	VRGTAIEERIRELALSFPETYEDHPWGDFPVFKVGANKVFAWL
Ga0209474_103949391	3300026550	Soil	VRLETIEGRIKELALSFPEAYEDRPWGDFPVFKVGDNKVFGWA
Ga0207428_109675601	3300027907	Populus Rhizosphere	VRVAAIERRITEEALSFPESYEDRPWGDFPVFKVGENKVFGWAVVEEGGVHVTVKL
Ga0247689_10250131	3300028281	Soil	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGWVV
Ga0307321_10816691	3300028704	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQIEDGAVHLTV
Ga0307295_101293492	3300028708	Soil	VQAATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGW
Ga0307293_100431134	3300028711	Soil	VRKATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAVAEDDAVHV
Ga0307303_101436412	3300028713	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQVEGGAVHVTVKL
Ga0307309_100092131	3300028714	Soil	VRAATIERKVKELALSFPEAYEDRPWGDFPVFKVGDNKVFGWAVVR
Ga0307313_100210124	3300028715	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFG
Ga0307313_101830472	3300028715	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQVQEGAVH
Ga0307311_101695131	3300028716	Soil	MRRNELARLRQIEAKIHEVALGFPEAYEDRPWGDFPVFKVGQNKVFGWAVTRED
Ga0307301_100655081	3300028719	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQIEDGAVHLTVKLT
Ga0307282_101837814	3300028784	Soil	MLGTAIETRIRELALSFPATYEDHPWGDFPVFKVGE
Ga0307282_105908002	3300028784	Soil	LACPTGRVRNGKNAAVRLEAIEQRITELALSFPEAYEDRPWGDFPVFKVGDNKVFGWAVV
Ga0307299_102864352	3300028793	Soil	MRLEAMEQRIRGLALSFPEAYEDRPWGDFPVFKVGDNKVFGWAVLED
Ga0307287_103740191	3300028796	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVF
Ga0307305_101721811	3300028807	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQV
Ga0307296_100806154	3300028819	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQVEDG
Ga0307314_101971511	3300028872	Soil	MRLEAMEQRIRGLALSFPEAYEDRPWGDFPVFKVGDNKVFGWAVLE
Ga0307314_103160301	3300028872	Soil	VRTATIERRITELALSFPESYEDRPWGDFPVFKVGAN
Ga0307286_103346322	3300028876	Soil	VQAATIERRITELALSFPEAYEDRPWGDFPVFKVGQNKVFGWAVTRDGA
Ga0268241_100937061	3300030511	Soil	VRLSTIERRIKELALSFPQAYEDRPWGDFPVFKVG
Ga0308201_101201221	3300031091	Soil	VRKATIERRITELALSFPESYEDRPWGDFPVFKVGANKVFGWAQVQEGAVHVTMKLTAEE
Ga0307406_110563051	3300031901	Rhizosphere	MRPVRKTTIERRIMELALSFPEAYEDRPWGDFPVFKVGQNKVFGWMVTRDDSVDVT
Ga0308176_102481411	3300031996	Soil	MRVSAIERRIHELALSFPEAYEDRPWGDFPVYKVGAN
Ga0307414_106951541	3300032004	Rhizosphere	MRPVRKTTIERRIMELALSFPEAYEDRPWGDFPVFKVGQNKVFGWMVTRDDSVD
Ga0310906_103629962	3300032013	Soil	VGQNGPVRMATIERRITELALSFPEAYEDRPWGDFPVFKVGENKV
Ga0335085_105371982	3300032770	Soil	VRLATIEERIRELALGFPEAYEDRPWGDFPVYKVGENKVFGWAIVREGSVDVTVKLTQE
Ga0373958_0105670_516_665	3300034819	Rhizosphere Soil	VRTATIERRITELALSFPEAYEDRPWGDFPVFKVGENKVFGWVVAREESV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences