Metagenome / Metatranscriptome Family F050419

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050419
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	74 residues
Representative Sequence	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA
Number of Associated Samples	105
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.86 %
% of genes near scaffold ends (potentially truncated)	29.66 %
% of genes from short scaffolds (< 2000 bps)	66.90 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.483 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (12.414 % of family members)
Environment Ontology (ENVO)	Unclassified (35.862 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.483 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.85% β-sheet: 0.00% Coil/Unstructured: 71.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF01266	DAO	14.48
PF00149	Metallophos	11.03
PF00821	PEPCK_GTP	6.21
PF03695	UPF0149	3.45
PF12850	Metallophos_2	1.38
PF03466	LysR_substrate	1.38
PF13411	MerR_1	1.38
PF07286	D-Glu_cyclase	0.69
PF02472	ExbD	0.69
PF00850	Hist_deacetyl	0.69
PF02525	Flavodoxin_2	0.69
PF00113	Enolase_C	0.69
PF08335	GlnD_UR_UTase	0.69
PF14833	NAD_binding_11	0.69
PF13416	SBP_bac_8	0.69
PF01381	HTH_3	0.69
PF00106	adh_short	0.69
PF02810	SEC-C	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent	Energy production and conversion [C]	6.21
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	3.45
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.38
COG0148	Enolase	Carbohydrate transport and metabolism [G]	0.69
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.69
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.69
COG4336	Uncharacterized conserved protein YcsI, UPF0317/DUF1446 family	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
All Organisms	root	All Organisms	45.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
cellular organisms	root	All Organisms → cellular organisms	45.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.83 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.38 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	40.00 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	37.24 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.07 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.07 %
Raphidophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae	0.69 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.07 %
unclassified Comamonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae	1.38 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	0.69 %
Chattonellales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.07 %
Comamonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	1.38 %
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	0.69 %
Chattonellaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.07 %
Comamonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	1.38 %
Heterosigma	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae → Heterosigma	0.69 %
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.07 %
Comamonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	1.38 %
Heterosigma akashiwo	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae → Heterosigma → Heterosigma akashiwo	0.69 %
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|F0B48LX02HVT33	Not Available	506	Open in IMG/M
2170459003\|FZN2CUW02H4A8N	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	504	Open in IMG/M
3300002705\|JGI25156J39149_1000143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	52740	Open in IMG/M
3300002705\|JGI25156J39149_1014394	Not Available	1632	Open in IMG/M
3300002705\|JGI25156J39149_1053759	Not Available	523	Open in IMG/M
3300003316\|rootH1_10026305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2518	Open in IMG/M
3300003316\|rootH1_10026313	Not Available	1461	Open in IMG/M
3300003316\|rootH1_10054861	Not Available	1102	Open in IMG/M
3300003320\|rootH2_10023481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5985	Open in IMG/M
3300003323\|rootH1_10080037	Not Available	1266	Open in IMG/M
3300003752\|Ga0055539_1000277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	29675	Open in IMG/M
3300003752\|Ga0055539_1005104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1716	Open in IMG/M
3300003761\|Ga0055535_1000056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	128204	Open in IMG/M
3300003761\|Ga0055535_1012649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1278	Open in IMG/M
3300005327\|Ga0070658_10030001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4369	Open in IMG/M
3300005327\|Ga0070658_10096196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2445	Open in IMG/M
3300005327\|Ga0070658_10451682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1107	Open in IMG/M
3300005327\|Ga0070658_11938633	Not Available	509	Open in IMG/M
3300005329\|Ga0070683_100759122	Not Available	929	Open in IMG/M
3300005330\|Ga0070690_100029215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3418	Open in IMG/M
3300005337\|Ga0070682_100360349	Not Available	1087	Open in IMG/M
3300005339\|Ga0070660_100076057	Not Available	2629	Open in IMG/M
3300005344\|Ga0070661_100882122	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae → Heterosigma → Heterosigma akashiwo	738	Open in IMG/M
3300005364\|Ga0070673_100011083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6144	Open in IMG/M
3300005366\|Ga0070659_100438397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1106	Open in IMG/M
3300005366\|Ga0070659_100486075	Not Available	1051	Open in IMG/M
3300005456\|Ga0070678_101790395	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005458\|Ga0070681_11860919	Not Available	529	Open in IMG/M
3300005459\|Ga0068867_100792939	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005513\|Ga0077120_1089535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1389	Open in IMG/M
3300005519\|Ga0077119_10034316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3923	Open in IMG/M
3300005519\|Ga0077119_10306137	Not Available	600	Open in IMG/M
3300005519\|Ga0077119_10317986	Not Available	580	Open in IMG/M
3300005535\|Ga0070684_100454710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1184	Open in IMG/M
3300005539\|Ga0068853_101973843	Not Available	566	Open in IMG/M
3300005539\|Ga0068853_102216093	Not Available	533	Open in IMG/M
3300005543\|Ga0070672_100360789	Not Available	1240	Open in IMG/M
3300005564\|Ga0070664_101413611	Not Available	658	Open in IMG/M
3300005644\|Ga0075036_1662842	Not Available	557	Open in IMG/M
3300005841\|Ga0068863_102572048	Not Available	518	Open in IMG/M
3300006032\|Ga0066696_10297280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1048	Open in IMG/M
3300006353\|Ga0075370_10006350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5936	Open in IMG/M
3300006953\|Ga0074063_11785971	Not Available	529	Open in IMG/M
3300009093\|Ga0105240_10088785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3782	Open in IMG/M
3300009093\|Ga0105240_10189035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2423	Open in IMG/M
3300009093\|Ga0105240_10210697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2271	Open in IMG/M
3300009098\|Ga0105245_10339487	Not Available	1485	Open in IMG/M
3300009174\|Ga0105241_12692437	Not Available	501	Open in IMG/M
3300009545\|Ga0105237_11310118	Not Available	731	Open in IMG/M
3300009660\|Ga0105854_1080301	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300009660\|Ga0105854_1108491	Not Available	870	Open in IMG/M
3300009660\|Ga0105854_1242050	Not Available	612	Open in IMG/M
3300009709\|Ga0116227_10066144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3122	Open in IMG/M
3300009787\|Ga0116226_10171989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	2254	Open in IMG/M
3300010371\|Ga0134125_11264560	Not Available	806	Open in IMG/M
3300010375\|Ga0105239_13002151	Not Available	550	Open in IMG/M
3300010375\|Ga0105239_13585451	Not Available	504	Open in IMG/M
3300010403\|Ga0134123_12051259	Not Available	631	Open in IMG/M
3300010867\|Ga0126347_1104639	Not Available	1014	Open in IMG/M
3300013104\|Ga0157370_11054279	Not Available	735	Open in IMG/M
3300013104\|Ga0157370_11282366	Not Available	660	Open in IMG/M
3300013296\|Ga0157374_10745115	Not Available	994	Open in IMG/M
3300013296\|Ga0157374_12632387	Not Available	531	Open in IMG/M
3300013308\|Ga0157375_10087738	All Organisms → cellular organisms → Bacteria → Proteobacteria	3164	Open in IMG/M
3300014969\|Ga0157376_11583195	Not Available	689	Open in IMG/M
3300015202\|Ga0167663_1076210	Not Available	996	Open in IMG/M
3300016341\|Ga0182035_10007656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	6155	Open in IMG/M
3300021170\|Ga0210400_10923618	Not Available	712	Open in IMG/M
3300021403\|Ga0210397_10181763	Not Available	1492	Open in IMG/M
3300021433\|Ga0210391_11480947	Not Available	521	Open in IMG/M
3300021475\|Ga0210392_10814113	Not Available	698	Open in IMG/M
3300022561\|Ga0212090_10745002	Not Available	607	Open in IMG/M
3300022720\|Ga0242672_1125780	Not Available	529	Open in IMG/M
3300022908\|Ga0247779_1011307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2831	Open in IMG/M
3300023275\|Ga0247776_10378785	Not Available	521	Open in IMG/M
3300025226\|Ga0209674_100024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	535481	Open in IMG/M
3300025228\|Ga0209672_103291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3410	Open in IMG/M
3300025230\|Ga0209563_121717	Not Available	704	Open in IMG/M
3300025231\|Ga0207427_100531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	19835	Open in IMG/M
3300025242\|Ga0209258_100603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	29333	Open in IMG/M
3300025246\|Ga0209646_1000012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	573300	Open in IMG/M
3300025253\|Ga0209677_100793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	15900	Open in IMG/M
3300025256\|Ga0209759_1000797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	25577	Open in IMG/M
3300025256\|Ga0209759_1008637	Not Available	3157	Open in IMG/M
3300025256\|Ga0209759_1013818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2166	Open in IMG/M
3300025909\|Ga0207705_10013889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5807	Open in IMG/M
3300025909\|Ga0207705_10031978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3758	Open in IMG/M
3300025909\|Ga0207705_10282119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1272	Open in IMG/M
3300025909\|Ga0207705_10367183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1110	Open in IMG/M
3300025909\|Ga0207705_10803767	Not Available	730	Open in IMG/M
3300025913\|Ga0207695_10003993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	20356	Open in IMG/M
3300025913\|Ga0207695_10804610	Not Available	820	Open in IMG/M
3300025919\|Ga0207657_10024269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5622	Open in IMG/M
3300025919\|Ga0207657_10532977	All Organisms → cellular organisms → Bacteria → Proteobacteria	919	Open in IMG/M
3300025932\|Ga0207690_10692639	Not Available	837	Open in IMG/M
3300025934\|Ga0207686_10022927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3599	Open in IMG/M
3300025940\|Ga0207691_10244579	Not Available	1550	Open in IMG/M
3300025944\|Ga0207661_10803469	Not Available	866	Open in IMG/M
3300025949\|Ga0207667_10498539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1235	Open in IMG/M
3300025949\|Ga0207667_11138188	Not Available	762	Open in IMG/M
3300025960\|Ga0207651_10002494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8776	Open in IMG/M
3300025960\|Ga0207651_10969266	Not Available	759	Open in IMG/M
3300026023\|Ga0207677_12317056	Not Available	500	Open in IMG/M
3300026067\|Ga0207678_10475755	Not Available	1087	Open in IMG/M
3300026116\|Ga0207674_10377889	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300026116\|Ga0207674_11469722	Not Available	651	Open in IMG/M
3300028562\|Ga0302151_10000085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	54851	Open in IMG/M
3300028562\|Ga0302151_10200718	Not Available	676	Open in IMG/M
3300028574\|Ga0302153_10043902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1496	Open in IMG/M
3300028666\|Ga0265336_10000032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	167925	Open in IMG/M
3300028741\|Ga0302256_10146264	Not Available	638	Open in IMG/M
3300028765\|Ga0302198_10259910	Not Available	831	Open in IMG/M
3300028783\|Ga0302279_10001134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	38598	Open in IMG/M
3300028783\|Ga0302279_10162563	Not Available	1091	Open in IMG/M
3300028813\|Ga0302157_10719411	Not Available	507	Open in IMG/M
3300029907\|Ga0311329_10039438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4190	Open in IMG/M
3300029922\|Ga0311363_11607286	Not Available	513	Open in IMG/M
3300029951\|Ga0311371_10171320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3280	Open in IMG/M
3300029956\|Ga0302150_10014270	Not Available	3194	Open in IMG/M
3300029987\|Ga0311334_10455439	Not Available	1023	Open in IMG/M
3300029989\|Ga0311365_10236635	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300030002\|Ga0311350_10961467	Not Available	764	Open in IMG/M
3300030294\|Ga0311349_10107188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2603	Open in IMG/M
3300030520\|Ga0311372_10002925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	40840	Open in IMG/M
3300030520\|Ga0311372_11317234	Not Available	910	Open in IMG/M
3300030520\|Ga0311372_12487491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	582	Open in IMG/M
3300030617\|Ga0311356_11869560	Not Available	533	Open in IMG/M
3300030739\|Ga0302311_10250920	Not Available	1310	Open in IMG/M
3300031232\|Ga0302323_102214063	Not Available	626	Open in IMG/M
3300031456\|Ga0307513_10982928	Not Available	553	Open in IMG/M
3300031716\|Ga0310813_11715395	Not Available	588	Open in IMG/M
3300031726\|Ga0302321_101812192	Not Available	707	Open in IMG/M
3300031726\|Ga0302321_101960461	Not Available	680	Open in IMG/M
3300031730\|Ga0307516_10000803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	43064	Open in IMG/M
3300031730\|Ga0307516_10247191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1480	Open in IMG/M
3300031730\|Ga0307516_10755324	Not Available	632	Open in IMG/M
3300031736\|Ga0318501_10113153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1366	Open in IMG/M
3300031747\|Ga0318502_10026933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2858	Open in IMG/M
3300031938\|Ga0308175_101684621	Not Available	710	Open in IMG/M
3300031939\|Ga0308174_11709919	Not Available	541	Open in IMG/M
3300031946\|Ga0310910_10084876	Not Available	2318	Open in IMG/M
3300031996\|Ga0308176_10154831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2104	Open in IMG/M
3300034170\|Ga0370487_0000438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10333	Open in IMG/M
3300034170\|Ga0370487_0032235	Not Available	1572	Open in IMG/M
3300034170\|Ga0370487_0107370	Not Available	897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.93%
Environmental	Environmental	42.07%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.93%
Terrestrial	Environmental → Terrestrial	41.38%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.28%
Soil	Environmental → Terrestrial → Soil	23.45%
Peat	Environmental → Terrestrial → Peat	16.55%
Roots	Host-Associated → Plants → Roots	16.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.28%
Rhizome	Host-Associated → Plants → Rhizome	3.45%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.38%
Peat Moss	Host-Associated → Plants → Peat Moss	1.38%
Freshwater	Environmental → Aquatic → Freshwater	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.59%
Epiphytes	Host-Associated → Plants → Roots → Epiphytes	6.90%
Endophytes	Host-Associated → Plants → Roots → Endophytes	6.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.83%
Loam	Environmental → Terrestrial → Soil → Loam	4.14%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.38%
Ice	Environmental → Aquatic → Freshwater → Ice	0.69%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.69%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.59%
Unclassified	Host-Associated → Plants → Roots → Epiphytes → Unclassified	6.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.21%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	6.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.14%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	3.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.07%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.38%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	12.41%
Arabidopsis Root	Host-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root	6.90%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.21%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.21%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	6.21%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.14%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.45%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	3.45%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.76%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	2.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.07%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.07%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.38%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.38%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.38%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.38%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300002705	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS	Host-Associated	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003752	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2	Host-Associated	Open in IMG/M
3300003761	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005513	Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)	Host-Associated	Open in IMG/M
3300005519	Combined assembly of arab plate scrape CL_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005644	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_053 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015202	Arctic sediment microbial communities from supraglacial cryoconite, Storglaci?ren, Tarfala, Sweden (Sample st-12a, ablation zone cryoconite)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025226	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025228	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025230	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025231	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025242	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025246	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes)	Host-Associated	Open in IMG/M
3300025253	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025256	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_08277530	2170459002	Grass Soil	MESPMTDARRPSFLSHFGRAAQARRAPDLADMGTAFALDEALDLGDYSTLAPGETPPIRATVPVAPWRLWLGRKLGA
E4A_01263950	2170459003	Grass Soil	LTDGVPDDQRLTSHVLRNFGRSAARPRAPDLADMGTAFALDEALQQGVYDSTIPGEAPAPMRAVVPVAPWRLWLGRKLGA
JGI25156J39149_10001439	3300002705	Arabidopsis Root	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRATVRVAPWRLWLGRKLGA*
JGI25156J39149_10143941	3300002705	Arabidopsis Root	MTDARRPSFLRNFGRAAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMQAVVPVAPWRLWLGRKLGA*
JGI25156J39149_10537592	3300002705	Arabidopsis Root	MTNATRPTFLRNFGRGTASPRHPPDFADMGTAFGLDEAIESGSIDSVVPGDPSPPPLRASAPVASWRLWLGRKLGA*
rootH1_100263053	3300003316	Sugarcane Root And Bulk Soil	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALEGGAIDSVVPGDPSPPPLRAAVPVAPWRLWLGRKLGA*
rootH1_100263133	3300003316	Sugarcane Root And Bulk Soil	MTNASRPTFLRNFGRGTSSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPLRAAVPVAPWRLWLGRKLGA*
rootH1_100548612	3300003316	Sugarcane Root And Bulk Soil	MTNASRPTFLRNFGRGATSPRRPPDLADMGTAFALDEALESGHIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA*
rootH2_100234817	3300003320	Sugarcane Root And Bulk Soil	MTNASRPTFLRNFGRGATPPRRPPDLADMGTAFALDEALESGHIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA*
rootH1_100800372	3300003323	Sugarcane Root And Bulk Soil	NFGRGASSPRRPPDLADMGTAFALDEALESGHIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA*
Ga0055539_100027728	3300003752	Arabidopsis Root	MTNASRPTFLRNFGRGASSSHRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPLRAAVPVAPWRLWLGRKLGA*
Ga0055539_10051041	3300003752	Arabidopsis Root	MTNASRPTFLRHFGRPPAPDLADMGTAFALDEALENGSYDSLPPGQPPPLRAAVPVAPWRLWLGRKLGG*
Ga0055535_100005689	3300003761	Arabidopsis Root	MSNASRPTFLRNFGRGTAARRAPDLADMGTAFALDEALEQGSYDTLAPGESPPPMRAVVPVAPWRLWLGRKLGA*
Ga0055535_10126491	3300003761	Arabidopsis Root	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRAAGRVAPWRLWLGRKLGA*
Ga0070658_100300015	3300005327	Corn Rhizosphere	MTDARRPGFLRHFDRGTRARPAADLADMGTAFALDEALESGDYSTLTPGDVPPMRAVARVAPWRLWLGRKLGA*
Ga0070658_100961962	3300005327	Corn Rhizosphere	MSHASRPTFLRSLGRGASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPAPRPLRAAVPVAPWRLWLGRKLGA*
Ga0070658_104516821	3300005327	Corn Rhizosphere	MTDARRPSFLRNFGRPAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMRPVVPVAPWR
Ga0070658_119386331	3300005327	Corn Rhizosphere	MTDARRPSFLRHFERGTRPRPAADLADMGTAFALDEALESGDYSTLVPGDAPPMRAVVPVAPWRLWLGRKLGA*
Ga0070683_1007591221	3300005329	Corn Rhizosphere	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALYEALESGSIDSIVPGDPSPPPVRATVRVAPWRLWLGRKLGA*
Ga0070690_1000292152	3300005330	Switchgrass Rhizosphere	MTHASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALESGAIDSIVPGDPSPPPIRAAAPVAPWRLWLGRKLGA*
Ga0070682_1003603492	3300005337	Corn Rhizosphere	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA*
Ga0070660_1000760573	3300005339	Corn Rhizosphere	MTDARRPSFLRNFGRAAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMRAVVPVAPWRLWLGRKLGA*
Ga0070661_1008821222	3300005344	Corn Rhizosphere	MTDARRPSFLRNFGRPAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMRPVVPVAPWRLWLGRKLGA*
Ga0070673_1000110838	3300005364	Switchgrass Rhizosphere	MTDARRPTFLRNFGRGAQARRAPDLADMGTAFALDEALEMGDYSTLAPGDTPPPMRPVVPVAPWRLWLGRKLGA*
Ga0070659_1004383973	3300005366	Corn Rhizosphere	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVASW
Ga0070659_1004860752	3300005366	Corn Rhizosphere	MTDARRPGFLRHFDRGTRARPAADLADMGTAFALDEALESGDYSTLTPGDVPPMRAVVPVAPWRLWLGRKLGA*
Ga0070678_1017903952	3300005456	Miscanthus Rhizosphere	MSNASRPTFLRNFGRGAASSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPLRAAVPVAPWRLWLGRKLGA*
Ga0070681_118609191	3300005458	Corn Rhizosphere	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKL
Ga0068867_1007929392	3300005459	Miscanthus Rhizosphere	NASRPTFLRNFGRGAASSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPLRAAVPVAPWRLWLGRKLGA*
Ga0077120_10895352	3300005513	Arabidopsis Rhizosphere	MTDARRPSFLRNFGRAAQARRTPDLADMGTAFALDEALDMGDYSTLAPGETPPMRPVVPVAPWRLWLGRKLGA*
Ga0077119_100343165	3300005519	Arabidopsis Root	MTNASRPTFLRPFGRPAAPRRAPELADMGTAFALDEAIQHGAYDSIVPGDTPPPTIRAAVPVAPWRLWLGRKLGG*
Ga0077119_103061371	3300005519	Arabidopsis Root	ESPMTDARRPTFLRNFGRGAQARRAPDLADMGTAFALDEALENGDYSTLAPGDTPPPMRAVVPVAPWRLWLGRKLGA*
Ga0077119_103179861	3300005519	Arabidopsis Root	MTDARRPTFLRHFGRPAPSRRAPDLADMGTAFALDEALDMGDYSTLAPGETPPARAVVPVAPWRLWLGRKLGA*
Ga0070684_1004547103	3300005535	Corn Rhizosphere	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALEALESGSIDSIVPGDPSPPPVRAAVRVAPWRLWLGRKLGA
Ga0068853_1019738431	3300005539	Corn Rhizosphere	MTNASRPAFLRNFGRPAVPDLADMGTAFALDEALENGSYDSLPPGETPPMRAAVPVAPWRLWLGRKLGA*
Ga0068853_1022160931	3300005539	Corn Rhizosphere	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRAAVRVAPWRLWLGRKL
Ga0070672_1003607892	3300005543	Miscanthus Rhizosphere	MTNASRPTFLRPFGRAAVPRRAPELADMGTAFALDEAIEHGSIDSLVPGDAPPPPIRAAVPVAPWRLWLGRKLGG*
Ga0070664_1014136111	3300005564	Corn Rhizosphere	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRATVRVAPWRLWLGRKLGA*
Ga0075036_16628422	3300005644	Permafrost Soil	TNASRPSFLRHFGRGAAPQLASDLADMGTAFALDEALERGNYDTLVPGESPPPMRAVVPVAPWRLWLGRKLG*
Ga0068863_1025720481	3300005841	Switchgrass Rhizosphere	SHGSNPESPMTHASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALESGAIDSIVPGDPSPPPIRAAAPVAPWRLWLGRKLGA*
Ga0066696_102972803	3300006032	Soil	MTNASRPTFLRNFGRGATSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPMRAALPVAPWRLWLGRKLGA*
Ga0075370_100063505	3300006353	Populus Endosphere	MTNASRPTFLRNFGRGAASQRPPDFADMGTAFGLDEAIESGAIDSVVPGDPNPPPLRASAPVASWRLWLGRKLGA*
Ga0074063_117859712	3300006953	Soil	MTNASRPTFLRPFVRAATPRRAPELADMGTAFALDEAVQHGSYDSIVPGDSPPPPIRAAVPVAPWRLW
Ga0105240_100887853	3300009093	Corn Rhizosphere	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRAAVRVAPWRLWLGRKLGA*
Ga0105240_101890353	3300009093	Corn Rhizosphere	MESPMTDARRPSFLRNFGRPAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMRPVVPVAPWRLWLGRKLGA*
Ga0105240_102106972	3300009093	Corn Rhizosphere	MTNASRPTFLRNFGRGASSPRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA*
Ga0105245_103394872	3300009098	Miscanthus Rhizosphere	MSNASRPTFLRNFGRGAASSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA*
Ga0105241_126924371	3300009174	Corn Rhizosphere	HGSNLERPMTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA*
Ga0105237_113101181	3300009545	Corn Rhizosphere	PMTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRATVRVAPWRLWLGRKLGA*
Ga0105854_10803011	3300009660	Permafrost Soil	MECPMTNDTRPAFLRNFGRAAAAKRTPDLADMGTAFALDEALEQGVYDSLVPGEPPPMRAVPVAPWRLWLGRKLGS*
Ga0105854_11084913	3300009660	Permafrost Soil	MTNASRPTFFRHFGRGTASQLAPDLADMGTAFALDEALERGSYDTLVPGESPPPMRAVVPVAPWRLWLGRKLG*
Ga0105854_12420502	3300009660	Permafrost Soil	CSRFKQESPMPTASRPTFLRHFGRALTARQDPDLADMGTAFALDEAMEQPRYDSMTPYESASLPRPVPVAPWRLWLGRKLGS*
Ga0116227_100661442	3300009709	Host-Associated	MTNATRPTFLRGFGRGSAARRAPDLADMGTAFALDEALERGGYDTLAPGDSPPPVRAAVPVAPWRLWLGRKLG*
Ga0116226_101719893	3300009787	Host-Associated	MTQATRPPFLRPFGRGAASRRPADLADMGTAFALDEALQNGSYDTRVPGESPPPARAVVRVAPWRLWLGRKLGS*
Ga0134125_112645601	3300010371	Terrestrial Soil	THWPDVSSLEKPMTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPAPVRAAVPVAPWRLWLGRKLGA*
Ga0105239_130021511	3300010375	Corn Rhizosphere	METAMTNASRPAFLRNFGRPAVPDLADMGTAFALDEALENGSYDSLPPGETPPMRAAVPVAPWRLWLGRKLGA*
Ga0105239_135854512	3300010375	Corn Rhizosphere	MTHASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALESGAIDSIVPGDPSPPPVRATVRV
Ga0134123_120512591	3300010403	Terrestrial Soil	MESPMPTASRPTFLRHFGRPAAANRAPDLADMGTAFALDEALERGSYDSLVPGETPPMRAAVPVAPWRLWLGRKLGA*
Ga0126347_11046391	3300010867	Boreal Forest Soil	HGSNLMESPMTDARRLTFLRNLGRGKQARRAPDLADMGTAFALDEALEAGDYSTLAPGETPPPMRAAVRVAPWRLWLGRKLGA*
Ga0157370_110542791	3300013104	Corn Rhizosphere	MESPMTDARRPTFLRHFGRPAPSRRAPDLADMGTAFALDEALDMGDYSTLAPGEAPPARAVVPVAPWRLWLGRKLGA*
Ga0157370_112823662	3300013104	Corn Rhizosphere	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA*
Ga0157374_107451151	3300013296	Miscanthus Rhizosphere	MESPMTDARRPSFLRNLGRAAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMRPAVPVAPWRLWLGRKLGA*
Ga0157374_126323871	3300013296	Miscanthus Rhizosphere	MESPMTDARRPSFLRHFGRPAPLGRAPDLADMGTDFALDEALDMGDYSTLAPGETPPMRPAVPVAPWRL
Ga0157375_100877384	3300013308	Miscanthus Rhizosphere	PTFLRNFGRGASSSRRPPDLADMGTAFALDEALESGAIDSIVPGDPSPPPIRAAAPVAPWRLWLGRKLGA*
Ga0157376_115831951	3300014969	Miscanthus Rhizosphere	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALESGAIDSIVPGDPSPPPIRAAAPVAPWRLWLGRKLGG*
Ga0167663_10762102	3300015202	Glacier Forefield Soil	MTNASRSTFLRHFGRKKTARRAPDLADMGTAFALDEALERGDGETLVAGNSPSPMRSAIRVAPWRLWLGRKLG*
Ga0182035_100076568	3300016341	Soil	MTNASRPTFLRNFGRGASSQRRPPDFADLGTAFGLDEAIESGSIDSVVPGDPNPP
Ga0210400_109236182	3300021170	Soil	MTNASRPTFLRNFGRGTAARRAPDLADMGTAFALDEALEQGSYDTLAPGESPPPMRPVVPVAPWRLWLGRKLGA
Ga0210397_101817632	3300021403	Soil	MTTTSRPTFLRHFGRLAAAQRAPDLADMGTAFALDEALEQGTYDTLAPGESPPPMRAAVPVAPWRLWLGRKLGA
Ga0210391_114809472	3300021433	Soil	MTNASRPTFLRNFGRAPAHRAPDLADMGTAFALDEALETGHYDSLAPGEPMPVRTAVPVAPWRLWLGRK
Ga0210392_108141132	3300021475	Soil	MTDARRPTFLRNFGRGAQARRAPDLADMGTAFALDEALEAGDYSTLAPGETPPPIRAAVPVAPWRLWLGRKLGA
Ga0212090_107450021	3300022561	Glacier Valley	MSNASRPTFLRNFGRGSAAHRAPDLADMGTAFALDEALERGSLDTLVPGESPPPMRAAVTVAPWRLWLGRKLG
Ga0242672_11257801	3300022720	Soil	PMPNASRPTFLRNFGRHVPPPRPHEMADMGTAFALDEALEQGVYDSLPPGEQAPVRVVVPVAPWRLWLGRKLGA
Ga0247779_10113073	3300022908	Plant Litter	MNNAPRLRFLRHLARPPAQRAPDLADMGTAFALDEALESGSRDALAQGEGRSVRAAVPVAPWRLWLGRKLGG
Ga0247776_103787851	3300023275	Plant Litter	MESPMTNASRPTFLRNFGRGAAAHRAPDMADMGTAFALDEALERGALDTLVPGESPPPRRAVVPVAPWRLWLGRKLGS
Ga0209674_10002460	3300025226	Arabidopsis Root	MTNASRPTFLRNFGRGASSSHRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPLRAAVPVAPWRLWLGRKLGA
Ga0209672_1032913	3300025228	Arabidopsis Root	MSNASRPTFLRNFGRGTAARRAPDLADMGTAFALDEALEQGSYDTLAPGESPPPMRAVVPVAPWRLWLGRKLGA
Ga0209563_1217171	3300025230	Arabidopsis Root	MTDARRPSFLRNFGRAAQARRTPDLADMGTAFALDEALDMGDYSTLAPGETPPMRPVVPVAPWRLWLGRKLGA
Ga0207427_1005316	3300025231	Arabidopsis Rhizosphere	MTNASRPTFLRNFGRGASSPRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA
Ga0209258_10060322	3300025242	Arabidopsis Root	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRAAGRVAPWRLWLGRKLGA
Ga0209646_1000012443	3300025246	Arabidopsis Root	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRATVRVAPWRLWLGRKLGA
Ga0209677_10079310	3300025253	Arabidopsis Root	MTNASRPTFLRHFGRPPAPDLADMGTAFALDEALENGSYDSLPPGQPPPLRAAVPVAPWRLWLGRKLGG
Ga0209759_10007973	3300025256	Arabidopsis Root	MTDARRPSFLRNFGRAAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMQAVVPVAPWRLWLGRKLGA
Ga0209759_10086372	3300025256	Arabidopsis Root	MTNATRPTFLRNFGRGTASPRHPPDFADMGTAFGLDEAIESGSIDSVVPGDPSPPPLRASAPVASWRLWLGRKLGA
Ga0209759_10138185	3300025256	Arabidopsis Root	MTNASRPTFLRPFGRPAAPRRAPELADMGTAFALDEAIQHGAYDSIVPGDTPPPTIRAAVPVAPWRLWLGRKLGG
Ga0207705_100138897	3300025909	Corn Rhizosphere	MTDARRPSFLRNFGRPAQARRAPDLADMGTAFALDEALEMGACDSLAPGESPPARVAVPVAP
Ga0207705_100319784	3300025909	Corn Rhizosphere	MTDARRPGFLRHFDRGTRARPAADLADMGTAFALDEALESGDYSTLTPGDVPPMRAVARVAPWRLWLGRKLGA
Ga0207705_102821193	3300025909	Corn Rhizosphere	TNASRPAFLRNFGRPAVPDLADMGTAFALDEALENGSYDSLPPGETPPMRAAVPVAPWRLWLGRKLGA
Ga0207705_103671833	3300025909	Corn Rhizosphere	MSHASRPTFLRSLGRGASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPAPRPLRAAVPVAPWRLWLGRKLGA
Ga0207705_108037672	3300025909	Corn Rhizosphere	MTDARRPSFLRHFERGTRPRPAADLADMGTAFALDEALESGDYSTLVPGDAPPMRAVVPVAPWRLWLGRKLGA
Ga0207695_1000399322	3300025913	Corn Rhizosphere	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRAAVRVAPWRLWLGRKLGA
Ga0207695_108046102	3300025913	Corn Rhizosphere	MTDARRPSFLRNFGRPAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMRPVVPVAPWRLWLGRKLGA
Ga0207657_100242694	3300025919	Corn Rhizosphere	MTDARRPSFLRNFGRAAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMRAVVPVAPWRLWLGRKLGA
Ga0207657_105329771	3300025919	Corn Rhizosphere	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPAPRPLRAAVPVAPWRLWLGRKLGA
Ga0207690_106926391	3300025932	Corn Rhizosphere	LRNFGRPAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMRPVVPVAPWRLWLGRKLGA
Ga0207686_100229276	3300025934	Miscanthus Rhizosphere	MTHASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALESGAIDSIVPGDPSPPPIRAAAPVAPWRLWLGRKLGA
Ga0207691_102445791	3300025940	Miscanthus Rhizosphere	MTNASRPTFLRPFGRAAVPRRAPELADMGTAFALDEAIEHGSIDSLVPGDAPPPPIRAAVPVAPWRLWLGRKLGG
Ga0207661_108034691	3300025944	Corn Rhizosphere	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALYEALESGSIDSIVPGDPSPPPVRATVRVAPWRLWLGRKLGA
Ga0207667_104985392	3300025949	Corn Rhizosphere	MTNASRPTFLRNFGRGASSSRRLPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRAAVRVAPWRLWLGRKLGA
Ga0207667_111381882	3300025949	Corn Rhizosphere	MTNASRPAFLRNFGRPAVPDLADMGTAFALDEALENGSYDSLPPGETPPMRAAVPVAPWRLWLGRKLGA
Ga0207651_1000249410	3300025960	Switchgrass Rhizosphere	MTDARRPTFLRNFGRGAQARRAPDLADMGTAFALDEALEMGDYSTLAPGDTPPPMRPVVPVAPWRLWLGRKLGA
Ga0207651_109692661	3300025960	Switchgrass Rhizosphere	LHTGLTVPLMESPMTDARRPSFLRNFGRPAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPMRPVVPVAPWRLWLGRKLGA
Ga0207677_123170561	3300026023	Miscanthus Rhizosphere	MTNASRPTFLRNFGRGASSPRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAA
Ga0207678_104757553	3300026067	Corn Rhizosphere	MTNASRPTFLRNFGRGAASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA
Ga0207674_103778891	3300026116	Corn Rhizosphere	ARRPSFLRNFGRAAQARRAPDLADMGTAFALDEALDMGDYSTLAPGETPPVRAVVPVAPWRLWLGRKLGA
Ga0207674_114697221	3300026116	Corn Rhizosphere	MTNASRPTFLRHFGRGASSSRRPPDLADMGTAFALDEALESGSIDSIVPGDPSPPPVRAAVPVASWRLWLGRKLGA
Ga0302151_1000008546	3300028562	Bog	MTNATRPTFLRSFGRGSAARRAPDLADMGTAFALDEALDQGSYDTLAPGDSSPPVRAAVPVAPWRLWLGRKLGG
Ga0302151_102007182	3300028562	Bog	MTNASRPSFLRHFGRGAAPQLASDLADMGTAFALDEALERGSCDTLAPGESPPPIRAVVPVAPWRLWLGRKLG
Ga0302153_100439022	3300028574	Bog	MTNATRPTFLRSFGRGSAARRAPDLADMGTAFALDEALDQGSYDTLAPGDSPPPVRAAVPVAPWRLWLGRKLGG
Ga0265336_1000003244	3300028666	Rhizosphere	MTNATRPTFLRNFGRGAAARRAPDLADMGTAFALDEALEQGSYDTLPPGESPPPMRAAVPVAPWRLWLGRKLGS
Ga0302256_101462642	3300028741	Fen	MTNASRPTFLRSFGRGAAPRRAPELADMGTAFALDEALEQGSYDTLVPGASSPPTRSAVPVAPWRLWLGRKLGG
Ga0302198_102599102	3300028765	Bog	MTNASRPSFLRHFGRGAALDQASDLADMGTAFALDEALERGDCDTLVPAQSPPPMRAVVPVAPWRLWLGRKLG
Ga0302279_1000113413	3300028783	Bog	MSNSSRPQFLRHFGRAAASRRAPDLADMGTAFALDEALDRGMYETLPPEPAPARVVVPVAPWRLWLGRKLGA
Ga0302279_101625632	3300028783	Bog	SSNATRPTFLRSFGRGSAARRAPDLADMGTAFALDEALDQGSYDTLAPGDSPPPVRAAVPVAPWRLWLGRKLGG
Ga0302157_107194111	3300028813	Bog	MTNATRPTFLRGFGRGSAARRAPDLADMGTAFALDEALERGGYDTLAPGDSPPPVRAAVPVAPWRLWLGRKLG
Ga0311329_100394386	3300029907	Bog	LRSFGRGSAARRAPDLADMGTAFALDEALDQGSYDTLAPGDSSPPVRAAVPVAPWRLWLGRKLGG
Ga0311363_116072861	3300029922	Fen	TVQPLEGLMSNASRATFFRHFGRGAASRLAPDLADMGTAFALDEALERGSSCDTLVPGESPPPMRAVVPVAPWRLWLGRKLGS
Ga0311371_101713203	3300029951	Palsa	MTNASRPTFLRSFGRAAAARRAPDLADMGTAFALDEALEHGSCDSLIPGDSPPPVRTAVPVAPWRLWLGRKLGS
Ga0302150_100142701	3300029956	Bog	MTNATRPTFLRSFGRGSAARRAPDLADMGTAFALDEALDQGSYDTLAPGDSPPPVRAAVPVAPWRLWLGRKL
Ga0311334_104554392	3300029987	Fen	MTNASRPPFLRNFGRSAGPRRAPELADMGTAFALDEALEQGSCDTLAPGQSPPPVRAVVPVAPWRLWLGRKLGG
Ga0311365_102366352	3300029989	Fen	MTNASRPAFLRPFGRPAAPLAGPDLADMGTAFALDEALDQGVYDTLAPGETHPPVRAAVPVAPWRLWLGRKLGA
Ga0311350_109614671	3300030002	Fen	MTNASRPAFLRPFGRPAAPLAGPDLADMGTAFALDEALDQGVYDTLAPGETHPPVRAAVPVAPWRLWLGRKLRA
Ga0311349_101071881	3300030294	Fen	HGSPPMENQMTNASRPAFLRPFGRPAAPLAGPDLADMGTAFALDEALDQGVYDTLAPGETHPPVRAAVPVAPWRLWLGRKLGA
Ga0311372_1000292524	3300030520	Palsa	MTDARRPTFLRNFGRGAQARRAPDLADMGTAFALDEALEAGDYSTLAPGETPAPIRAAVPVAPWRLWLGRKLGA
Ga0311372_113172341	3300030520	Palsa	MTNASRPTFLRHFGRAAATPRVPDLADMGTAFALDEALEQGLHDTLVPGDSSPPVRTAVPVASWRLWLGRKLGT
Ga0311372_124874911	3300030520	Palsa	MTNASRPTFLRSFGRAAAARRAPDLADMGTAFALDQALERGSYDSQIPGDSPPPVRAAVPVAPWRLWLGRKLGS
Ga0311356_118695602	3300030617	Palsa	PTFLRNFGRGAQARRAPDLADMGTAFALDEAHEAGDYSTLAPGETPAPIRAAVPVAPWRLWLGRKLGA
Ga0302311_102509201	3300030739	Palsa	TGFTIQPLESPMTNASRPTFLRSFGRAAAARRAPDLADMGTAFALDEALEHGSCDSLIPGDSPPPVRTAVPVAPWRLWLGRKLGS
Ga0302323_1022140632	3300031232	Fen	MTNASRPAFLRPFGRPAAPLAGPDLADMGTAFALDEALDQGVYDTLAPGETRPPVRAAVPVAPWRLWLGRKLGA
Ga0307513_109829281	3300031456	Ectomycorrhiza	MTNASRPTFLRHFGRPAARHRAPELADMGTAFALDEALEQGSCDSMIPGETRPPVRAAVPVAPWRLWLGRK
Ga0310813_117153951	3300031716	Soil	MTNASRPTFLRNFGRGASSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPVRAAVPVAPWRLWLGRKLGA
Ga0302321_1018121922	3300031726	Fen	MTNASRPTFLRNFGRGAAPRRAPELADMGTAFALDEALEQGSYDTLVPGQMPPPMRAAVPVAPWRLWLGRKLGG
Ga0302321_1019604612	3300031726	Fen	MTKAPRPPFLRNFGRSAATQRTPDLADMGTAFALDEALEQGSYDSLAPGDMPPPMRAAVPVAPWRLWLGRKLGA
Ga0307516_1000080314	3300031730	Ectomycorrhiza	MTNASRPTFLRNFGRHAAPPQVPDLADMGTAFALDEALEQGAYDSQAPGDMPLPVRAVVPVAPWRLWLGRKLGA
Ga0307516_102471913	3300031730	Ectomycorrhiza	MTNASRPAFLRTFGRTAAPLAAPDLADMGTAFALDEALDLGVYDTLAPGETRPPMRAAVPVAPWRLWLGRKLGA
Ga0307516_107553241	3300031730	Ectomycorrhiza	MTNASRPTFLRNFGRHAAPPYVPDLADMGTAFALDEALEQGAYDSQAPGDMPPPMRAVVPVAPWRLWLGRKLGA
Ga0318501_101131533	3300031736	Soil	MTNASRPTFLRNFGRGASSQRRPPDFADLGTAFGLDEAIESGSIDSVVPGDPNPPPLRA
Ga0318502_100269331	3300031747	Soil	MTNASRPTFLRNFGRGASSQRRPPDFADLGTAFGLDEAIESGSIDSVVPGDPNPPPLRAATPAAPWWLWLGRKLGA
Ga0308175_1016846212	3300031938	Soil	MTNASRPTFLRNFGRGVSSSRRPPDLADMGTAFALDEVLEGGAIDSIVPGDLSPPPVRAAAPVSPWRLWLG
Ga0308174_117099192	3300031939	Soil	PTFLRNFGRPAAPHRTPDLADMGTAFALDEALDQGIYDSLPPGETPRPMRAPVPVAPWRLWLGRKLGA
Ga0310910_100848761	3300031946	Soil	MTNASRPTFLRNFGRGASSQRRPPDFADLGTAFGLDEAIESGSIDSVVPGDPNPPPLRAATPAAPWWLWLGR
Ga0308176_101548311	3300031996	Soil	MTNASRPTFLRNFGRGVSSSRRPPDLADMGTAFALDEALEGGAIDSIVPGDPSPPPMRAAVPVAPWRLWLGRKLG
Ga0370487_0000438_3874_4107	3300034170	Untreated Peat Soil	MEGLMTNASRPSFLRHFGRGSGSHRAPDLADMGTAFALDEALERATCDTLPPGESPPMRAAVPVAPWRLWLGRKLGA
Ga0370487_0032235_288_521	3300034170	Untreated Peat Soil	MESQMTNASRPPFLRGFGRGSAARRAPDLADMGTAFALDEALERGDCDTLAPGESPPPFRAAVPVAPWRLWLGRKLG
Ga0370487_0107370_370_603	3300034170	Untreated Peat Soil	MEGLMTNASRPNFLRHFGRGSVSQRAPDLADMGTAFALDEALERGSYDTLPPGESPPMRTAVPVAPWRLWLGRKLGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050419

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences