Metagenome / Metatranscriptome Family F050352

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050352
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	61 residues
Representative Sequence	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVTE
Number of Associated Samples	132
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.93 %
% of genes near scaffold ends (potentially truncated)	98.62 %
% of genes from short scaffolds (< 2000 bps)	84.14 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.965 % of family members)
Environment Ontology (ENVO)	Unclassified (31.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.759 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.23% β-sheet: 11.49% Coil/Unstructured: 48.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF01315	Ald_Xan_dh_C	33.10
PF02738	MoCoBD_1	20.69
PF01977	UbiD	20.00
PF14534	DUF4440	1.38
PF00005	ABC_tran	1.38
PF03401	TctC	0.69
PF09084	NMT1	0.69
PF09917	DUF2147	0.69
PF00355	Rieske	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	20.00
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.69
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.69
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.10 %
Unclassified	root	N/A	11.03 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.28 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	17.24 %
Unclassified	root	N/A	11.03 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	15.17 %
Unclassified	root	N/A	11.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.97 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	15.17 %
Unclassified	root	N/A	11.03 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	7.59 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	15.17 %
Unclassified	root	N/A	11.03 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	7.59 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.69 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.69 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	15.17 %
Unclassified	root	N/A	11.03 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	6.90 %
Cupriavidus basilensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus basilensis	0.69 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	15.17 %
Unclassified	root	N/A	11.03 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6.90 %
Cupriavidus basilensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus basilensis	0.69 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1064189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus basilensis	650	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10038802	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300002917\|JGI25616J43925_10029340	All Organisms → cellular organisms → Bacteria → Proteobacteria	2435	Open in IMG/M
3300003911\|JGI25405J52794_10160488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300004480\|Ga0062592_102611200	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300005187\|Ga0066675_10442376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	965	Open in IMG/M
3300005332\|Ga0066388_101045798	Not Available	1374	Open in IMG/M
3300005363\|Ga0008090_10110828	All Organisms → cellular organisms → Bacteria → Proteobacteria	1963	Open in IMG/M
3300005445\|Ga0070708_100367616	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300005471\|Ga0070698_101701274	Not Available	583	Open in IMG/M
3300005557\|Ga0066704_10422592	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300005564\|Ga0070664_100649891	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300005713\|Ga0066905_100018850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3605	Open in IMG/M
3300005713\|Ga0066905_102343946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300006028\|Ga0070717_12099242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300006058\|Ga0075432_10381346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300006577\|Ga0074050_10005198	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006845\|Ga0075421_100708162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1169	Open in IMG/M
3300006846\|Ga0075430_100168885	All Organisms → cellular organisms → Bacteria → Proteobacteria	1820	Open in IMG/M
3300006847\|Ga0075431_102067011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300006854\|Ga0075425_100256701	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300006935\|Ga0081246_1384760	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300007265\|Ga0099794_10803402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300007788\|Ga0099795_10305302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	701	Open in IMG/M
3300009011\|Ga0105251_10130888	Not Available	1137	Open in IMG/M
3300009038\|Ga0099829_11202909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	627	Open in IMG/M
3300009143\|Ga0099792_10819883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	611	Open in IMG/M
3300009162\|Ga0075423_11068686	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300009174\|Ga0105241_11039953	Not Available	768	Open in IMG/M
3300009792\|Ga0126374_10459850	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300010046\|Ga0126384_10902694	All Organisms → cellular organisms → Bacteria → Proteobacteria	798	Open in IMG/M
3300010046\|Ga0126384_11016602	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300010046\|Ga0126384_11325426	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300010046\|Ga0126384_11762317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300010046\|Ga0126384_12296423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300010047\|Ga0126382_11492518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300010047\|Ga0126382_11513872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	618	Open in IMG/M
3300010159\|Ga0099796_10532552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	527	Open in IMG/M
3300010325\|Ga0134064_10505830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300010358\|Ga0126370_10775473	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300010359\|Ga0126376_11358954	Not Available	733	Open in IMG/M
3300010360\|Ga0126372_12319243	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010361\|Ga0126378_10802657	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300010361\|Ga0126378_12089074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300010362\|Ga0126377_12427821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	600	Open in IMG/M
3300010376\|Ga0126381_100046544	All Organisms → cellular organisms → Bacteria	5287	Open in IMG/M
3300010398\|Ga0126383_10816246	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300010398\|Ga0126383_13203013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	534	Open in IMG/M
3300010863\|Ga0124850_1013116	All Organisms → cellular organisms → Bacteria	2636	Open in IMG/M
3300011271\|Ga0137393_10895216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300012204\|Ga0137374_10094782	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300012206\|Ga0137380_10445785	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300012211\|Ga0137377_10092432	All Organisms → cellular organisms → Bacteria	2859	Open in IMG/M
3300012349\|Ga0137387_11210838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300012355\|Ga0137369_10651350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	728	Open in IMG/M
3300012357\|Ga0137384_11283536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	579	Open in IMG/M
3300012361\|Ga0137360_11658200	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012930\|Ga0137407_10499085	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300012955\|Ga0164298_10024310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2636	Open in IMG/M
3300012986\|Ga0164304_11114356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	632	Open in IMG/M
3300012989\|Ga0164305_11199982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	657	Open in IMG/M
3300013296\|Ga0157374_10276607	Not Available	1657	Open in IMG/M
3300014150\|Ga0134081_10343578	Not Available	546	Open in IMG/M
3300015356\|Ga0134073_10238322	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300015371\|Ga0132258_10207322	All Organisms → cellular organisms → Bacteria	4759	Open in IMG/M
3300015373\|Ga0132257_102843512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	631	Open in IMG/M
3300016270\|Ga0182036_10010295	All Organisms → cellular organisms → Bacteria → Proteobacteria	4942	Open in IMG/M
3300016319\|Ga0182033_11870770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	545	Open in IMG/M
3300016319\|Ga0182033_12075391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300016371\|Ga0182034_11948668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300016387\|Ga0182040_11746095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300018031\|Ga0184634_10407506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	619	Open in IMG/M
3300018058\|Ga0187766_10743423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	681	Open in IMG/M
3300018082\|Ga0184639_10275632	Not Available	887	Open in IMG/M
3300018468\|Ga0066662_11993418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	608	Open in IMG/M
3300019886\|Ga0193727_1044156	Not Available	1465	Open in IMG/M
3300019996\|Ga0193693_1046882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	704	Open in IMG/M
3300020581\|Ga0210399_10648089	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300021082\|Ga0210380_10088112	Not Available	1365	Open in IMG/M
3300021478\|Ga0210402_11748031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300021559\|Ga0210409_11163727	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300021560\|Ga0126371_12509952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300022694\|Ga0222623_10303136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	613	Open in IMG/M
3300023062\|Ga0247791_1062043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	602	Open in IMG/M
3300026327\|Ga0209266_1245909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300026536\|Ga0209058_1186411	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300027161\|Ga0208368_111510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300027824\|Ga0209040_10180740	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300027874\|Ga0209465_10436164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300027875\|Ga0209283_10076552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2162	Open in IMG/M
3300028536\|Ga0137415_10081092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3103	Open in IMG/M
3300028719\|Ga0307301_10101773	Not Available	910	Open in IMG/M
3300028755\|Ga0307316_10169280	Not Available	782	Open in IMG/M
3300028771\|Ga0307320_10439585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	525	Open in IMG/M
3300028819\|Ga0307296_10035352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2637	Open in IMG/M
3300028878\|Ga0307278_10093361	Not Available	1354	Open in IMG/M
3300028884\|Ga0307308_10396358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	661	Open in IMG/M
3300030294\|Ga0311349_11382707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	655	Open in IMG/M
3300030336\|Ga0247826_10873749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	708	Open in IMG/M
3300031170\|Ga0307498_10325652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	582	Open in IMG/M
3300031543\|Ga0318516_10016773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3663	Open in IMG/M
3300031543\|Ga0318516_10093726	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300031545\|Ga0318541_10798531	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300031549\|Ga0318571_10285325	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031564\|Ga0318573_10117619	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300031668\|Ga0318542_10029836	All Organisms → cellular organisms → Bacteria	2339	Open in IMG/M
3300031679\|Ga0318561_10316395	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300031679\|Ga0318561_10807224	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300031680\|Ga0318574_10734160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	579	Open in IMG/M
3300031682\|Ga0318560_10303987	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300031744\|Ga0306918_10084504	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300031747\|Ga0318502_10093160	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300031751\|Ga0318494_10616545	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031763\|Ga0318537_10003521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5016	Open in IMG/M
3300031768\|Ga0318509_10208731	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300031771\|Ga0318546_10011096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4806	Open in IMG/M
3300031777\|Ga0318543_10342147	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300031778\|Ga0318498_10064937	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300031782\|Ga0318552_10449844	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300031795\|Ga0318557_10073971	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300031821\|Ga0318567_10319399	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300031894\|Ga0318522_10019819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2169	Open in IMG/M
3300031897\|Ga0318520_10048995	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300031910\|Ga0306923_10141691	All Organisms → cellular organisms → Bacteria	2740	Open in IMG/M
3300031941\|Ga0310912_10044831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3082	Open in IMG/M
3300031946\|Ga0310910_10638494	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300031947\|Ga0310909_10487738	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300032009\|Ga0318563_10559806	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300032010\|Ga0318569_10336320	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300032035\|Ga0310911_10646040	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300032043\|Ga0318556_10763134	Not Available	503	Open in IMG/M
3300032044\|Ga0318558_10182033	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300032051\|Ga0318532_10315666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300032059\|Ga0318533_11175672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300032063\|Ga0318504_10541077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300032066\|Ga0318514_10171867	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300032067\|Ga0318524_10069756	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300032094\|Ga0318540_10011423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3483	Open in IMG/M
3300032094\|Ga0318540_10083153	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300032094\|Ga0318540_10601886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300032174\|Ga0307470_10645756	Not Available	798	Open in IMG/M
3300032179\|Ga0310889_10570369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	581	Open in IMG/M
3300032180\|Ga0307471_101645230	Not Available	797	Open in IMG/M
3300032397\|Ga0315287_10502925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1439	Open in IMG/M
3300033290\|Ga0318519_10332287	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.03%
Host-Associated	Host-Associated	8.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.90%
Plants	Host-Associated → Plants	8.97%
Aquatic	Environmental → Aquatic	4.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.90%
Freshwater	Environmental → Aquatic → Freshwater	2.07%
Sediment	Environmental → Aquatic → Sediment	2.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.07%
Peat	Environmental → Terrestrial → Peat	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.31%
Loam	Environmental → Terrestrial → Soil → Loam	6.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Lake	Environmental → Aquatic → Freshwater → Lake	0.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.38%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.07%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.38%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006935	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027161	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10641893	3300000655	Forest Soil	MPALNRTLLACLVIVGIGPLLSPAAPAQEITVKVGTVRSISTATILWGVEKGYFKE
AF_2010_repII_A001DRAFT_100388022	3300000793	Forest Soil	MTLGRILIAWLAIIAGANALHAQEVTVKVGTVRSISTATILWGVEKGYFKEYGINVVTETLDT
JGI25616J43925_100293401	3300002917	Grasslands Soil	MRLRRILFASFAIVATALAANAQELTVKVGTVRSISTATILWGVEKGYFKCACGARTNTA
JGI25405J52794_101604881	3300003911	Tabebuia Heterophylla Rhizosphere	MTPVFQRCLLACLLAIGASAAQAQEVTVKVGTVRSISTATILWAVEKGYFKEHGIKVVTXTLD
Ga0062592_1026112002	3300004480	Soil	MSVVLQRSLLACLVTLGAVHAPAAGAQEIAVKVGAVRSISTVAILWASEKGYFKEYGIKVVPETL
Ga0066675_104423761	3300005187	Soil	MPAFPRTLLACVAVLSAAFSRAPACAHEVTVKIGTVRSISTVAILWAAEQGYFKEFGIKVVNENLDTAANSIALLAQ
Ga0066388_1010457981	3300005332	Tropical Forest Soil	MTPVFQRCLLACLLAVGAGAAQAQELTVKVGTVRSISTATILWAVEKGYF
Ga0008090_101108282	3300005363	Tropical Rainforest Soil	MTVQRTLLACLAIIGGASAVYGQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTET
Ga0070708_1003676162	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRRSLFACSFIIGGTLAANAQEVTVKVGTVRSISTATI
Ga0070698_1017012742	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRRTLFASIAIIAGALAVHAQEVTVKVGTVRSISTATILWGVEKGY
Ga0066704_104225921	3300005557	Soil	MRLRRILFASIAIIAGDLAVNAQEVTVKVGTVRSISTATILWGVEKGYFKEHGINVVTETLDTAANSI
Ga0070664_1006498911	3300005564	Corn Rhizosphere	MSVVLQRSLLACLVTLGAVHAPAAGAQEVTVKVGAVRSISTVAILWASEKGYFKEYGIKVVPETLDTAAN
Ga0066905_1000188501	3300005713	Tropical Forest Soil	MRLRRSLFACFAIIGGALAANAQEVTVKVGTVRSISTATILWGVEQGYFKDYGIK
Ga0066905_1023439462	3300005713	Tropical Forest Soil	MTFQRTLLACLAVVAGVGAAHAQEVTVKVGTVRSISTATILWAVEKGYFKEYGIKVV
Ga0070717_120992422	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRVQRTLLACLAVIGSASVAHAQEVTVKIGTVRSISTATILWGVEKGYFKDYGIKVVTETLDTAANSIAL
Ga0075432_103813463	3300006058	Populus Rhizosphere	MTTRRTLLAALAIIAGANTLHAQEVTVKVGAVRSISTATILWGVEKGYFKEYGIKLITE
Ga0074050_100051982	3300006577	Soil	MSFVLRRSVLACLATLGAVLAPAADAQEVTVKVGAVRSISTVAILWASEKGYFKEYGIKVSMDTLDTAA
Ga0075421_1007081621	3300006845	Populus Rhizosphere	MTPVFQRCLLACLLAIGASAVHAQEVTVKVGTVRSISTATILWAVEKGYFKEYGIKVVTE
Ga0075430_1001688852	3300006846	Populus Rhizosphere	MTPVFQRCLLACLLAIGASAVHAQEVTVKVGTVRSISTATILWAVEKGYFKE
Ga0075431_1020670111	3300006847	Populus Rhizosphere	MTLQRSLLVVLGFLGGTFAAHAQEVTVKVGTVRSISTTTILWAAEKGYFKQYGIKVVPETLETAANSI
Ga0075425_1002567012	3300006854	Populus Rhizosphere	MRLRRSLFACSFIIGGTLAANAQEVTVKVGTVRSISTATILWGVEQGYF
Ga0081246_13847603	3300006935	Tropical Rainforest Soil	MTLQRILLACLAIVGGASAVYGQEVTVKVGTVRSISTATILWAVEKGYFKDYGIKVVTE
Ga0099794_108034021	3300007265	Vadose Zone Soil	TLVIKRTLLACLAVVGGASIASDSVVQAQEVSVKVGTVRSISTGTILWAA*
Ga0099795_103053022	3300007788	Vadose Zone Soil	MTSVLQRTLLACLAIVGGSIAAQAEEITVRVGTVRSISTATILWAVEKGYFKE
Ga0105251_101308881	3300009011	Switchgrass Rhizosphere	MSFVLRRSVLACLATLGAVLAPAADAQEVTVKVGAVRSISTVAILWASEKGYFKEYGIKVSMDT
Ga0099829_112029092	3300009038	Vadose Zone Soil	MAVMVQRKLLVLLGVVGGALAAHAQEVTVKVGTVRSISTVSILWAAEKGYFKEFGIKVVTENLDT
Ga0099792_108198831	3300009143	Vadose Zone Soil	MTSAIPRTLLACLAIIGGASAFHGQAAQAGEVTVRVGTVRSISTATILWAVE
Ga0075423_110686862	3300009162	Populus Rhizosphere	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTATILWGVEKGYFKDYGIKVVTETLDTAANS
Ga0105241_110399532	3300009174	Corn Rhizosphere	MSFVLRRSVLACLATLGAVLAPAADAQEVTVKVGAVRSISTVAILWASEKGYFKEYGIKVVPETL
Ga0126374_104598501	3300009792	Tropical Forest Soil	MTVQRTLLACLAIIGGASMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAANSIALL
Ga0126384_109026941	3300010046	Tropical Forest Soil	MPALNRTLLACLVIVGIGPLLSRAAPAQEVTVKVGTVRSISTATILWGVEQGYFKDYGIK
Ga0126384_110166023	3300010046	Tropical Forest Soil	MTVQRTLLACLAIIGGASMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAAN
Ga0126384_113254261	3300010046	Tropical Forest Soil	MTVRRTLLACLAIIGGASAAYAQEVTVKVGAVRSISTAAILWGVDKGYFKDYGIK
Ga0126384_117623173	3300010046	Tropical Forest Soil	MTARRTLLACLAIIGGASVAYAQEVTVKVGAVRSISTVAILWGVDKGYFKDYGIKVVTETLDTA
Ga0126384_122964231	3300010046	Tropical Forest Soil	MTIQRILLACIAIVGGASAVHGQEVIVKVGTVRSISTATILWAVEKGYFKDYGIK
Ga0126382_114925182	3300010047	Tropical Forest Soil	MTVRRTLLACLAIIGGASAAYAQEVTVKVGAVRSISTAAILWGVDKGYFKDYGIKVVTET
Ga0126382_115138722	3300010047	Tropical Forest Soil	MTFQRTLLACLAVVAGVGAAHAQEVTVKVGTVRSISTATILWAVEKGYFKDYGI
Ga0099796_105325521	3300010159	Vadose Zone Soil	MTLVIKRTLLACFAVVGGASIAPDRVAQAQEVTVKVGTVRSISTATILWAAEKGYFKEYGIKVVTETLDTAANSI
Ga0134064_105058302	3300010325	Grasslands Soil	MRLRRILFASIAIIAGELAVNAQEVTVKVGTVRSISTATILWGVEKGYFKEHGINVVT
Ga0126370_107754732	3300010358	Tropical Forest Soil	MTVQRTLLACLAIIGGASMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAA
Ga0126376_113589542	3300010359	Tropical Forest Soil	MTPVFQRCLLAYLLIIGASAAHAQEVTVKVGTVRSISTVSILWAVEKGYFKEHGIKVVTE
Ga0126372_123192432	3300010360	Tropical Forest Soil	MRVQRTLLACLAVIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKNYGIKVVT
Ga0126378_108026571	3300010361	Tropical Forest Soil	MTVRRTLLACLAIIGGASAAYAQEVTVKVGAVRSISTAAILWGVDKGYFKDYGIKVVTETLDTAAN
Ga0126378_120890743	3300010361	Tropical Forest Soil	MTIQRILLACIAIVGGASAVYGQEVTVKVGTVRSISTATILWAVEKGYF
Ga0126377_124278212	3300010362	Tropical Forest Soil	MTSVVQRLFACSALACVALADGTPAQAEELTVKVGTVRSISTATILWASEKGYFRDYGIKVVTETLDTAANSIALLAQ
Ga0126381_1000465441	3300010376	Tropical Forest Soil	MTLGRILIAWLAIIAGANALHAQEVTVKVGTVRSISTATILWGVEKGYFKEYGINV
Ga0126383_108162461	3300010398	Tropical Forest Soil	MPALNRTLLACLVIVGIGPLLSPAAPAQEVTVKVGTVRSISTATILWGVEKGYFKEHGINVV
Ga0126383_132030131	3300010398	Tropical Forest Soil	MTFLRSRTLLACLAILGGAGAAPADEVTVKVGTVRSISTATILWAAEKGYFK
Ga0124850_10131163	3300010863	Tropical Forest Soil	MTVQRTLLACLAIIGGASMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDY
Ga0137393_108952163	3300011271	Vadose Zone Soil	MAATLQRNLLVLFGIVGGAFAAHAQEVTVKVGTVRSISTVSILWAVEKGYFKEYGIK
Ga0137374_100947822	3300012204	Vadose Zone Soil	MTVQRTLLACLAIIGGASVAYAQEVTVKVGTVRSISTATILWAVEKGYFKDYGIKVVTETLDTA
Ga0137380_104457852	3300012206	Vadose Zone Soil	MIQRLLLACLAIVGGASAVYGQEVTVKVGTVRSISTAAILWGGREGLFQRLRH*
Ga0137377_100924322	3300012211	Vadose Zone Soil	MRLRRTLFAAIAIIAGDLAVNAQEVTVNVGTVRSISTATILWGIEKGYFKEHGINVVTETLD
Ga0137387_112108382	3300012349	Vadose Zone Soil	MRLRRTLFASIAIIAGDLAVNAQEVTVKVGTVRSISTATILWGVEKGYFKEHGINVVTETLDTAANSIAL
Ga0137369_106513502	3300012355	Vadose Zone Soil	MTVQRTLLACLAIIGGASVAYAQEVTVKVGTVRSISTATILWAVEKGYFKDYGIKVVTETLDTAANSIALLAQ
Ga0137384_112835363	3300012357	Vadose Zone Soil	MPVLQRTLLASLAMVGAAVAPAAQAQEVTVKVGTVRSISTVSILWAVEQGYFKEHGIK
Ga0137360_116582002	3300012361	Vadose Zone Soil	MTVQRTLLACLAIIGGASVAYAQEVTVKVGTVRSISTATILWAVEKGYF
Ga0137407_104990851	3300012930	Vadose Zone Soil	MPALSHSILACTAAFIGLGAGVAHAQEVTVRVGTVRSISTVSILWAVEKGYFKEYGIKVVNENLDTAANS
Ga0164298_100243103	3300012955	Soil	MSFVLRRSVLACLATLGAVLAPAADAQEVTVKIGAVRSISTVAILWASEKGYFKEYGIKVSMDTLDTAANSIA
Ga0164304_111143561	3300012986	Soil	MRVQRTLLACLAVIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDY
Ga0164305_111999822	3300012989	Soil	MSFVLRRSVLACLATLGAVLAPAADAQEVTVKVGAVRSISTVAILWASEKGYFKEYGIKVSMDTLDT
Ga0157374_102766072	3300013296	Miscanthus Rhizosphere	MSFVLRRSVLACLATLGAVLAPAADAQEGTVKVGAVRSISTFANLWASEKGYFKEYGIKVVPETLDTAANS
Ga0134081_103435781	3300014150	Grasslands Soil	MRLRRILFASIAIIAGDLAVNAQEVTVKVGTVRSISTATILWGVEK
Ga0134073_102383221	3300015356	Grasslands Soil	MRLRRTLFAAIAIIAGALAVNAQEITVKVGTVRSISTATILWG
Ga0132258_102073221	3300015371	Arabidopsis Rhizosphere	MSFVLRRSVLACLATLGAILAPAADAQEVTVKVGAVRSISTVAILWASEKGYFKEYGIKVSMDTLDTAAN
Ga0132257_1028435121	3300015373	Arabidopsis Rhizosphere	MSVVLQRSLLACLVTLGAVYAPAAGAQEVTVKVGAVRSISTVAILWASEKGYFKEYGITVVPETLDTAANSIAL
Ga0182036_100102955	3300016270	Soil	MHAAKRILLVCIAICVTMAAGAAAAPADEITVKVGTVRSISTVAILWAAEKGYFREYGIKVVNEDLDTAA
Ga0182033_118707702	3300016319	Soil	MSAAKRILLVCIAAMASTVRAPAQEVTVKVGTVRSISTVAILWAAEKGYFKDYGI
Ga0182033_120753911	3300016319	Soil	MTPQRTLLACLAIIGGASMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKV
Ga0182034_119486682	3300016371	Soil	MRVQRTLLACLAVIGGAGVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGI
Ga0182040_117460951	3300016387	Soil	MTVQRALLACLAIIGGASAVYGQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAANSI
Ga0184634_104075062	3300018031	Groundwater Sediment	MSVVLQRSLLACLVTLGAVHAPAAGAQEVTVRVGAVRSISTVAILWAAEKGYFKEYGIKV
Ga0187766_107434231	3300018058	Tropical Peatland	MRVPRSLLAFLLVVSAGAAHSQEVTIKVGTVRSISTVAILWAIERGYFTGYGIKV
Ga0184639_102756322	3300018082	Groundwater Sediment	MSFVLRRSVLACLATLGAVPAPAADAQEVTVKVGAVRSISTVSILWAVEKGYFKEYGIKV
Ga0066662_119934182	3300018468	Grasslands Soil	MNSMLCRGLLACLLTIGAGVLDARSARAEEVTIKVGTVRSISTATILWASEKGYFKEFGIKVVT
Ga0193727_10441562	3300019886	Soil	MSFVLQRSLLACLVTFGAVHAPAAGAQEVTVKVGAVRSISTVSILWAAEKGYFKEYGIKV
Ga0193693_10468822	3300019996	Soil	MSFVLQRSLLACLVTFGAVHAPAAGAQEVTVKVGAVRSISTVSILWAAEKGYFKEYGIKVATETL
Ga0210399_106480892	3300020581	Soil	MTVQRTLLACLAIVGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVT
Ga0210380_100881122	3300021082	Groundwater Sediment	MSVVLQRSLLACLVTLGAVHAPAAGAQEVTVKVGAVRSISTVAILWAAEKGYFKEYGIKVATETLDTAANSIA
Ga0210402_117480311	3300021478	Soil	MTSVIQRSLLACLAIIVGAGIYGQAAHAGEVTVRVGTVRSISTATILWAVEKGYFKDYGIKVVTETLDTAANSIALLA
Ga0210409_111637272	3300021559	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIK
Ga0126371_125099521	3300021560	Tropical Forest Soil	MTLQRILLACLAIVGGASAVHGQEVIVKVGTVRSISTATILWAVEKGYFKDYGIKVVTETLDTAANSIALLA
Ga0222623_103031361	3300022694	Groundwater Sediment	MSFVLQRSLLACLVTFGAVHAPAAGAQEVTVKVGAVRSISTVSILWADEKGYFKEYGI
Ga0247791_10620431	3300023062	Soil	MSVVLQRSLLACLVTLGAVHAPAAGAQEVTVKVGAVRSISTVAILWASEKGYFKEYGIKVVPET
Ga0209266_12459092	3300026327	Soil	MRLRRILFASIAIIAGDLAVNAQEVTVKVGTVRSISTATILWGVEKGYFKEHGINVVTETLDTAANSIA
Ga0209058_11864111	3300026536	Soil	MRLRRILFAAIAIIAGDLAVNAQEVTVKVGTVRSISTATILWGVEKGYFKEHGINVVTETLDTAANSI
Ga0208368_1115101	3300027161	Forest Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVTET
Ga0209040_101807402	3300027824	Bog Forest Soil	MPAVPRILLACIAVAAGAGIAPAQEVTVKVGTVRSISTVAILWAAEKGYFKEYGIKVVNEDL
Ga0209465_104361642	3300027874	Tropical Forest Soil	MTIQRILLACIAIVGGASAVYGQEVTVKVGTVRSISTATILWAVEKGYFKDYGIKVVTET
Ga0209283_100765523	3300027875	Vadose Zone Soil	MTPVLQRSLLACLAVVGAAGAASAEEVTVKVGTVRSISTVSILWAVEKGYFKEHGIKVVT
Ga0137415_100810921	3300028536	Vadose Zone Soil	MTSVIQRALLACLAVVGGAGSIHVHAARAQEVTVRVGTVRSISTATILWAVEKGYFKEYGIKVVTDTLDTAAN
Ga0307301_101017732	3300028719	Soil	MSVVLQRSLLVCLVTLGAVHAPAAGAQEVTVRVGAVRSISTVAILWAAEKGYFKEYGIKVATETLDTAANSIA
Ga0307316_101692801	3300028755	Soil	MTLVIKRTLLACLAVVGGASIAPDRVAQAQEVTVKVGTVRSISTATILWAAEKGYFKEYGIKV
Ga0307320_104395851	3300028771	Soil	MTLVIKRTLLACLAVVGGASIAPDRVAQAQEVTVKVGTVRSISTATILWAAEKGYFKEYGIKVVTETLDTAANSIALL
Ga0307296_100353521	3300028819	Soil	MSFVLQRSLLACLVTFGAVHAPAAGAQEVTVKVGAVRSISTVSILWAAEKGYFKEYGIKVATETLDTA
Ga0307278_100933611	3300028878	Soil	MTVQRTLLVCLAIIGGASAAHAQEVTVKVGAVRSISTAAILWGAEKGYFKD
Ga0307308_103963581	3300028884	Soil	MSVVLQRSLLACLVTLGAIHAPAAGAQEVTVKVGAVRSISTVAILWAAEKGYFKEYGIKVATETLDTAANSIA
Ga0311349_113827072	3300030294	Fen	MVVFKQSLLACFAVIAGTGIASAQEVTVKIGTVRSISTVAILWAVEKGYFKEFGIKVVNENLDTAANSI
Ga0247826_108737491	3300030336	Soil	MSFVLRRSVLACLATLGAVLAPAADAQEVTVKVGAVRSISTVAILWASEKGYFKEYGIKVSMDTL
Ga0307498_103256521	3300031170	Soil	MTSVIQRCLVACFGLACGASAAQAEELTVKVGTVRSISTATILWAVEKGYFKDYGIKVVTETLDTAANSIALLAQ
Ga0318516_100167734	3300031543	Soil	MTVQRILLACLAIVGGASAVYGQEVTVKVGTVRSISTATILWAVEKGYFKD
Ga0318516_100937262	3300031543	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKD
Ga0318541_107985311	3300031545	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDY
Ga0318571_102853252	3300031549	Soil	MTVQRALLACLAIIGGASAVYGQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLD
Ga0318573_101176192	3300031564	Soil	MTVQRTLLACLAIIGGTSMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAA
Ga0318542_100298362	3300031668	Soil	MTVQRALLACLAIIGGASAVYGQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDT
Ga0318561_103163952	3300031679	Soil	MTVQRTLLACLAIIGGTSMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAANSIALLA
Ga0318561_108072242	3300031679	Soil	MRVQRTLLACLAVIGGASLAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDY
Ga0318574_107341601	3300031680	Soil	MTLQRTLLACAAIAVGSAGAAHAEELTVKVGTVRSITTVAILWAAEKGYFK
Ga0318560_103039872	3300031682	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYG
Ga0306918_100845041	3300031744	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAANSIAL
Ga0318502_100931601	3300031747	Soil	MHAAKRILLVCIAICVTMAAGATAAPTDEITVKVGTVRSISTVAILWAAEKGYFREYGIKVVNEDLDTAANS
Ga0318494_106165451	3300031751	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAANS
Ga0318537_100035215	3300031763	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAAN
Ga0318509_102087312	3300031768	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAANSIALL
Ga0318546_100110965	3300031771	Soil	MTVQRALLACLAIIGGASAVYGQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIK
Ga0318543_103421472	3300031777	Soil	MTLGRTLIAWLAIVAGANALHAQEVTVKVGTVRSISTATILWGVEKGYFKEYGINV
Ga0318498_100649371	3300031778	Soil	MTVQRTLLACLAIIGGTSMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKD
Ga0318552_104498442	3300031782	Soil	MTLGRTLIAWLAIVAGANALHAQEVTVKVGTVRSISTATILWGVEKDYFKEYGINV
Ga0318557_100739711	3300031795	Soil	MHAAKRILLVCIAICVTMAAGAAAAPADEITVKVGTVRSISTVAILWAAEKGYFREYGIKVVN
Ga0318567_103193992	3300031821	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVTE
Ga0318522_100198191	3300031894	Soil	MTVQRALLACLAIIGGASAVYGQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTET
Ga0318520_100489953	3300031897	Soil	MTPQRTLLACLAIIGGASMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTET
Ga0306923_101416911	3300031910	Soil	MTVQRALLACLAIIGGASAVYGQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAANSIALLA
Ga0310912_100448313	3300031941	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVTETLDT
Ga0310910_106384941	3300031946	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYF
Ga0310909_104877382	3300031947	Soil	MTVQRTLLACLAIIGGTSMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIK
Ga0318563_105598062	3300032009	Soil	MTVQRTLLACLAIIGGASVAHAQEVTVKIGTVRSISTAAILWGVEKGYFKDYGIKVVTETLD
Ga0318569_103363201	3300032010	Soil	MHAAKRILLVCIAICVTMPAGAAAAPADEITVKVGTVRSISTVAILWAAEKGYFREYGIK
Ga0310911_106460402	3300032035	Soil	MTLGRTLIAWLAIVAGANALHAQEVTVKVGTVRSISTATILWGVEKDYFKEYGINVVTET
Ga0318556_107631342	3300032043	Soil	MHAAKRILLVCIAICITMAAGAAAARAEEVTVKVGTVRSISTVAILWAAEKGYFKEFGIKVVNEDLDTAANSIALLA
Ga0318558_101820333	3300032044	Soil	MTVRRILLACLAIIGGASAAYAQEVTVKVGAVRSISTAAILWGVDKGYFKDYGIKVV
Ga0318532_103156661	3300032051	Soil	MTVQRTLLACLAIIGGTSMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLD
Ga0318533_111756722	3300032059	Soil	MTVQRALLACLAIIGGASAVYGQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAANSIAL
Ga0318504_105410771	3300032063	Soil	MTVQRALLACLAIIGGASAVYGQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVTETLDTAANSIA
Ga0318514_101718672	3300032066	Soil	MTVQRTLLACLAIIGGTSMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKV
Ga0318524_100697561	3300032067	Soil	MTVQRILLACLAIVGGASAVYGQEVTVKVGTVRSISTATILWAVEKGYFKDYGIKVVTETLD
Ga0318540_100114231	3300032094	Soil	MTVRRILLACLAIIGGASAAYAQEVTVKVGAVRSISTAAILWGVDKGYFKYYG
Ga0318540_100831532	3300032094	Soil	MTVQRTLLACLAIIGGTSMAHAQEVTVKVGAVRSISTAAILWGVEKGYFKDYGIKVVT
Ga0318540_106018862	3300032094	Soil	MTLGRTLIAWLAIVAGANALHAQEVTVKVGTVRSISTATILWGVEKGYFKEYGINVVTETLD
Ga0307470_106457561	3300032174	Hardwood Forest Soil	MTPVFQRCLLACLLAIGASAAHAQEVTVKVGTVRSISTATILWAAEKGYFKEYGIKVV
Ga0310889_105703692	3300032179	Soil	MSVVLQRSLLACLVTLGAVHAPAAGAQEVTVKVGAVRSISTVAILWASEKGYFKEYGIKVVPETLDTAANS
Ga0307471_1016452302	3300032180	Hardwood Forest Soil	MMPVLQRSLLACLAVVGATGTASAEEVTVKVGTVRSISTVSILWAVERGYFKEHGIKVLT
Ga0315287_105029251	3300032397	Sediment	MVVFKQSLLACFAVIAGTGIASAQEVTVKIGTVRSISTVAILWAVEQGYF
Ga0318519_103322871	3300033290	Soil	MHAAKRILLVCIAICVTMAAGAAAAPADEITVKVGTVRSISTVAILWAAEKGYFREYGIKVVNEDLDTAANS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050352

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences