Metagenome Family F050273

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050273
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	49 residues
Representative Sequence	MSYNLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKAEEEEE
Number of Associated Samples	84
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	73.10 %
% of genes near scaffold ends (potentially truncated)	15.17 %
% of genes from short scaffolds (< 2000 bps)	66.90 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (98.621 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.276 % of family members)
Environment Ontology (ENVO)	Unclassified (45.517 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.345 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00270	DEAD	43.45
PF00149	Metallophos	9.66
PF00271	Helicase_C	8.97
PF08494	DEAD_assoc	6.21
PF01336	tRNA_anti-codon	3.45
PF12850	Metallophos_2	2.07
PF07282	OrfB_Zn_ribbon	2.07
PF07883	Cupin_2	0.69
PF14595	Thioredoxin_9	0.69
PF07617	DUF1579	0.69
PF00464	SHMT	0.69
PF01545	Cation_efflux	0.69
PF04138	GtrA	0.69
PF01813	ATP-synt_D	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1201	Lhr-like helicase	Replication, recombination and repair [L]	6.21
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.69
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.69
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.69
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.69
COG1394	Archaeal/vacuolar-type H+-ATPase subunit D/Vma8	Energy production and conversion [C]	0.69
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.31 %
Viruses	superkingdom	All Organisms → Viruses	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	98.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	26.21 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	26.21 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	26.21 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	26.21 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.69 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1019426	All Organisms → cellular organisms → Archaea	1192	Open in IMG/M
3300002558\|JGI25385J37094_10000398	All Organisms → cellular organisms → Archaea	11416	Open in IMG/M
3300002558\|JGI25385J37094_10000445	All Organisms → cellular organisms → Archaea	10999	Open in IMG/M
3300002558\|JGI25385J37094_10001199	All Organisms → cellular organisms → Archaea	8092	Open in IMG/M
3300002558\|JGI25385J37094_10005550	All Organisms → cellular organisms → Archaea	4441	Open in IMG/M
3300002558\|JGI25385J37094_10021551	All Organisms → cellular organisms → Archaea	2298	Open in IMG/M
3300002558\|JGI25385J37094_10034621	All Organisms → cellular organisms → Archaea	1766	Open in IMG/M
3300002558\|JGI25385J37094_10068048	All Organisms → cellular organisms → Archaea	1144	Open in IMG/M
3300002561\|JGI25384J37096_10126506	All Organisms → cellular organisms → Archaea	849	Open in IMG/M
3300002562\|JGI25382J37095_10044397	All Organisms → cellular organisms → Archaea	1725	Open in IMG/M
3300002562\|JGI25382J37095_10067166	All Organisms → cellular organisms → Archaea	1344	Open in IMG/M
3300002908\|JGI25382J43887_10046318	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	2365	Open in IMG/M
3300002912\|JGI25386J43895_10004254	All Organisms → cellular organisms → Archaea	3846	Open in IMG/M
3300005166\|Ga0066674_10134680	All Organisms → cellular organisms → Archaea	1161	Open in IMG/M
3300005167\|Ga0066672_10363586	All Organisms → cellular organisms → Archaea	945	Open in IMG/M
3300005167\|Ga0066672_10805598	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	590	Open in IMG/M
3300005172\|Ga0066683_10130327	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1537	Open in IMG/M
3300005172\|Ga0066683_10731700	All Organisms → cellular organisms → Archaea	583	Open in IMG/M
3300005176\|Ga0066679_10018788	All Organisms → cellular organisms → Archaea	3621	Open in IMG/M
3300005176\|Ga0066679_10785088	All Organisms → cellular organisms → Archaea	609	Open in IMG/M
3300005180\|Ga0066685_10365806	All Organisms → cellular organisms → Archaea	1001	Open in IMG/M
3300005445\|Ga0070708_100028516	All Organisms → cellular organisms → Bacteria	4804	Open in IMG/M
3300005446\|Ga0066686_10615099	All Organisms → cellular organisms → Archaea	738	Open in IMG/M
3300005518\|Ga0070699_100012681	All Organisms → cellular organisms → Archaea	7268	Open in IMG/M
3300005540\|Ga0066697_10085666	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1823	Open in IMG/M
3300005540\|Ga0066697_10513888	All Organisms → cellular organisms → Archaea	678	Open in IMG/M
3300005542\|Ga0070732_10000425	All Organisms → cellular organisms → Archaea	27415	Open in IMG/M
3300005554\|Ga0066661_10166265	All Organisms → cellular organisms → Archaea	1356	Open in IMG/M
3300005554\|Ga0066661_10173204	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1329	Open in IMG/M
3300005555\|Ga0066692_11003697	All Organisms → cellular organisms → Archaea	511	Open in IMG/M
3300005556\|Ga0066707_10034978	All Organisms → cellular organisms → Archaea	2818	Open in IMG/M
3300005561\|Ga0066699_10030772	All Organisms → cellular organisms → Archaea	3103	Open in IMG/M
3300005568\|Ga0066703_10221686	All Organisms → cellular organisms → Archaea	1150	Open in IMG/M
3300005568\|Ga0066703_10292152	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	987	Open in IMG/M
3300005586\|Ga0066691_10437960	All Organisms → cellular organisms → Archaea	780	Open in IMG/M
3300006034\|Ga0066656_10383888	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	908	Open in IMG/M
3300006034\|Ga0066656_10593907	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	717	Open in IMG/M
3300006794\|Ga0066658_10000014	All Organisms → cellular organisms → Archaea	56174	Open in IMG/M
3300006806\|Ga0079220_10689754	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	748	Open in IMG/M
3300007255\|Ga0099791_10073420	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1553	Open in IMG/M
3300007255\|Ga0099791_10504111	All Organisms → cellular organisms → Archaea	588	Open in IMG/M
3300007255\|Ga0099791_10659174	All Organisms → cellular organisms → Archaea	514	Open in IMG/M
3300007258\|Ga0099793_10009149	All Organisms → cellular organisms → Archaea	3776	Open in IMG/M
3300007258\|Ga0099793_10056827	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1741	Open in IMG/M
3300007258\|Ga0099793_10266570	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	829	Open in IMG/M
3300007265\|Ga0099794_10135651	All Organisms → cellular organisms → Archaea	1245	Open in IMG/M
3300007265\|Ga0099794_10279677	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	863	Open in IMG/M
3300007265\|Ga0099794_10484470	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	650	Open in IMG/M
3300007265\|Ga0099794_10805306	All Organisms → cellular organisms → Archaea	502	Open in IMG/M
3300009012\|Ga0066710_103429285	All Organisms → cellular organisms → Archaea	601	Open in IMG/M
3300009038\|Ga0099829_10072067	All Organisms → cellular organisms → Archaea	2622	Open in IMG/M
3300009038\|Ga0099829_10353712	All Organisms → cellular organisms → Archaea	1210	Open in IMG/M
3300009038\|Ga0099829_10372682	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1177	Open in IMG/M
3300009038\|Ga0099829_10553821	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	956	Open in IMG/M
3300009038\|Ga0099829_11539517	All Organisms → cellular organisms → Archaea	549	Open in IMG/M
3300009088\|Ga0099830_10378577	All Organisms → Viruses → Predicted Viral	1142	Open in IMG/M
3300009088\|Ga0099830_10780766	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	788	Open in IMG/M
3300009088\|Ga0099830_10946453	All Organisms → cellular organisms → Archaea	713	Open in IMG/M
3300009089\|Ga0099828_10027146	All Organisms → cellular organisms → Archaea	4564	Open in IMG/M
3300009089\|Ga0099828_11093468	All Organisms → cellular organisms → Archaea	709	Open in IMG/M
3300009090\|Ga0099827_10009578	All Organisms → cellular organisms → Archaea	6159	Open in IMG/M
3300009090\|Ga0099827_10131035	All Organisms → cellular organisms → Archaea	2031	Open in IMG/M
3300009090\|Ga0099827_10380216	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1205	Open in IMG/M
3300009090\|Ga0099827_11454494	All Organisms → cellular organisms → Archaea	596	Open in IMG/M
3300009090\|Ga0099827_11961127	All Organisms → cellular organisms → Archaea	509	Open in IMG/M
3300010333\|Ga0134080_10004874	All Organisms → cellular organisms → Archaea	4608	Open in IMG/M
3300010335\|Ga0134063_10435655	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	648	Open in IMG/M
3300010336\|Ga0134071_10453929	All Organisms → cellular organisms → Archaea	658	Open in IMG/M
3300011269\|Ga0137392_10234023	All Organisms → cellular organisms → Archaea	1509	Open in IMG/M
3300011269\|Ga0137392_11084658	All Organisms → cellular organisms → Archaea	657	Open in IMG/M
3300011270\|Ga0137391_10125488	All Organisms → cellular organisms → Archaea	2229	Open in IMG/M
3300011270\|Ga0137391_10298555	All Organisms → cellular organisms → Archaea	1390	Open in IMG/M
3300011270\|Ga0137391_11157271	All Organisms → cellular organisms → Archaea	621	Open in IMG/M
3300011271\|Ga0137393_11532620	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	556	Open in IMG/M
3300012096\|Ga0137389_10409633	All Organisms → cellular organisms → Archaea	1158	Open in IMG/M
3300012189\|Ga0137388_10806926	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	870	Open in IMG/M
3300012199\|Ga0137383_10524710	All Organisms → cellular organisms → Archaea	867	Open in IMG/M
3300012199\|Ga0137383_11211393	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300012201\|Ga0137365_10004292	All Organisms → cellular organisms → Archaea	11446	Open in IMG/M
3300012203\|Ga0137399_10013679	All Organisms → cellular organisms → Archaea	5024	Open in IMG/M
3300012203\|Ga0137399_10027419	All Organisms → cellular organisms → Archaea	3863	Open in IMG/M
3300012203\|Ga0137399_10078760	All Organisms → cellular organisms → Archaea	2495	Open in IMG/M
3300012203\|Ga0137399_10127894	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2004	Open in IMG/M
3300012203\|Ga0137399_11045139	All Organisms → cellular organisms → Archaea	688	Open in IMG/M
3300012206\|Ga0137380_11310531	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	609	Open in IMG/M
3300012207\|Ga0137381_11561690	All Organisms → cellular organisms → Archaea	551	Open in IMG/M
3300012210\|Ga0137378_10968660	All Organisms → cellular organisms → Archaea	764	Open in IMG/M
3300012349\|Ga0137387_10041928	All Organisms → cellular organisms → Archaea	3013	Open in IMG/M
3300012360\|Ga0137375_10073484	All Organisms → cellular organisms → Archaea	3598	Open in IMG/M
3300012362\|Ga0137361_10788147	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	865	Open in IMG/M
3300012363\|Ga0137390_10699465	All Organisms → cellular organisms → Archaea	976	Open in IMG/M
3300012918\|Ga0137396_10005526	All Organisms → cellular organisms → Archaea	7348	Open in IMG/M
3300012918\|Ga0137396_10057742	All Organisms → cellular organisms → Archaea	2679	Open in IMG/M
3300012927\|Ga0137416_10582554	All Organisms → cellular organisms → Archaea	973	Open in IMG/M
3300012977\|Ga0134087_10241342	All Organisms → cellular organisms → Archaea	825	Open in IMG/M
3300012977\|Ga0134087_10453906	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	635	Open in IMG/M
3300017654\|Ga0134069_1131618	All Organisms → cellular organisms → Archaea	828	Open in IMG/M
3300018431\|Ga0066655_10341468	All Organisms → cellular organisms → Archaea	981	Open in IMG/M
3300018431\|Ga0066655_10868722	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	615	Open in IMG/M
3300018431\|Ga0066655_11219053	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	534	Open in IMG/M
3300018468\|Ga0066662_10035901	All Organisms → cellular organisms → Archaea	3007	Open in IMG/M
3300018468\|Ga0066662_11764611	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	648	Open in IMG/M
3300021046\|Ga0215015_10103201	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1992	Open in IMG/M
3300021046\|Ga0215015_10256106	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1442	Open in IMG/M
3300021088\|Ga0210404_10084526	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1570	Open in IMG/M
3300024330\|Ga0137417_1070184	All Organisms → cellular organisms → Archaea	871	Open in IMG/M
3300026296\|Ga0209235_1000392	All Organisms → cellular organisms → Archaea	21733	Open in IMG/M
3300026296\|Ga0209235_1003305	All Organisms → cellular organisms → Archaea	8996	Open in IMG/M
3300026296\|Ga0209235_1025703	All Organisms → cellular organisms → Archaea	3096	Open in IMG/M
3300026296\|Ga0209235_1262609	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	530	Open in IMG/M
3300026297\|Ga0209237_1188513	All Organisms → cellular organisms → Archaea	688	Open in IMG/M
3300026298\|Ga0209236_1000502	All Organisms → cellular organisms → Archaea	22654	Open in IMG/M
3300026298\|Ga0209236_1190700	All Organisms → cellular organisms → Archaea	790	Open in IMG/M
3300026309\|Ga0209055_1024878	All Organisms → cellular organisms → Archaea	2818	Open in IMG/M
3300026309\|Ga0209055_1195862	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	619	Open in IMG/M
3300026317\|Ga0209154_1009962	All Organisms → cellular organisms → Archaea	4688	Open in IMG/M
3300026318\|Ga0209471_1022859	All Organisms → cellular organisms → Archaea	3132	Open in IMG/M
3300026325\|Ga0209152_10000093	All Organisms → cellular organisms → Archaea	44453	Open in IMG/M
3300026328\|Ga0209802_1000724	All Organisms → cellular organisms → Archaea	25414	Open in IMG/M
3300026334\|Ga0209377_1248465	All Organisms → cellular organisms → Archaea	585	Open in IMG/M
3300026342\|Ga0209057_1016178	All Organisms → cellular organisms → Archaea	4367	Open in IMG/M
3300026469\|Ga0257169_1074300	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	552	Open in IMG/M
3300026507\|Ga0257165_1093291	All Organisms → cellular organisms → Archaea	557	Open in IMG/M
3300026538\|Ga0209056_10025022	All Organisms → cellular organisms → Archaea	5752	Open in IMG/M
3300026548\|Ga0209161_10003339	All Organisms → cellular organisms → Archaea	12966	Open in IMG/M
3300026551\|Ga0209648_10383690	All Organisms → cellular organisms → Archaea	938	Open in IMG/M
3300027643\|Ga0209076_1083613	All Organisms → cellular organisms → Archaea	907	Open in IMG/M
3300027655\|Ga0209388_1038501	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1377	Open in IMG/M
3300027671\|Ga0209588_1037264	All Organisms → cellular organisms → Archaea	1565	Open in IMG/M
3300027748\|Ga0209689_1018188	All Organisms → cellular organisms → Archaea	4412	Open in IMG/M
3300027846\|Ga0209180_10189367	All Organisms → cellular organisms → Archaea	1187	Open in IMG/M
3300027846\|Ga0209180_10548333	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	644	Open in IMG/M
3300027862\|Ga0209701_10026627	All Organisms → cellular organisms → Archaea	3761	Open in IMG/M
3300027862\|Ga0209701_10496303	All Organisms → cellular organisms → Archaea	664	Open in IMG/M
3300027862\|Ga0209701_10710176	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	517	Open in IMG/M
3300027875\|Ga0209283_10015654	All Organisms → cellular organisms → Archaea	4577	Open in IMG/M
3300027875\|Ga0209283_10456067	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	827	Open in IMG/M
3300027875\|Ga0209283_10497264	All Organisms → cellular organisms → Archaea	785	Open in IMG/M
3300027882\|Ga0209590_10046544	All Organisms → cellular organisms → Archaea	2392	Open in IMG/M
3300027882\|Ga0209590_10111259	All Organisms → cellular organisms → Archaea	1652	Open in IMG/M
3300027882\|Ga0209590_10120865	All Organisms → cellular organisms → Archaea	1591	Open in IMG/M
3300027882\|Ga0209590_10338799	All Organisms → cellular organisms → Archaea	968	Open in IMG/M
3300028536\|Ga0137415_10014104	All Organisms → cellular organisms → Archaea	7934	Open in IMG/M
3300028536\|Ga0137415_10226182	All Organisms → cellular organisms → Archaea	1684	Open in IMG/M
3300028536\|Ga0137415_11115226	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.62%
Loam	Environmental → Terrestrial → Soil → Loam	1.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	41.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	18.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10194262	3300002557	Grasslands Soil	MSYSLQPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGESKKKVAEEEE*
JGI25385J37094_100003983	3300002558	Grasslands Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGESKKKVEEEE*
JGI25385J37094_1000044510	3300002558	Grasslands Soil	LSYSLPPDQGFALLQLLLYIFSFVSLILIFLYIAAERPGEAKKKTAEEEE*
JGI25385J37094_100011996	3300002558	Grasslands Soil	MSYSLPPDQGYALLQLLLYIFSFVSLVLIFLYIAAERPGEAKKKAAEEEE*
JGI25385J37094_100055503	3300002558	Grasslands Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAAEEEE*
JGI25385J37094_100215512	3300002558	Grasslands Soil	MSYSLDPNSEYALLQLLLYIFSFVTLILIFLYIASERPGEGKKKVEEEE*
JGI25385J37094_100346212	3300002558	Grasslands Soil	MSYNLDPNSEYALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEE*
JGI25385J37094_100680481	3300002558	Grasslands Soil	MSYSLPPEQEFALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKAEEEEE*
JGI25384J37096_101265062	3300002561	Grasslands Soil	EMSYSLDPNSEYALLQLLLYIFSFVTLILIFLYIASERPGEGKKKVEEEE*
JGI25382J37095_100443972	3300002562	Grasslands Soil	MSYSLPPDQEFALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKAEEEE*
JGI25382J37095_100671663	3300002562	Grasslands Soil	MSYNLDPNSEYALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEEE*
JGI25382J43887_100463182	3300002908	Grasslands Soil	MSYNLDPNSEYALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKXAEEEEE*
JGI25386J43895_100042544	3300002912	Grasslands Soil	MSYNLDPNSEYALLQLLLYIFSFVTLVLIFLYVAAERPGEGKKKAEEEEE*
Ga0066674_101346802	3300005166	Soil	MSYSLQPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE*
Ga0066672_103635862	3300005167	Soil	MSYSLDQNSEYALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEEE*
Ga0066672_108055982	3300005167	Soil	MSYNLDPNSEYALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKAEEEEE*
Ga0066683_101303271	3300005172	Soil	MSYSLPPDTEYSLLQLILYIFSFVTLVLIFFYIASERPGEKRKKEEE
Ga0066683_107317001	3300005172	Soil	MSYSLLPEQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKAEEEEE*
Ga0066679_100187882	3300005176	Soil	MSYNLDPNQEFALLQLLLYILSFVSLILIFLYIAAERPGEAKKKAAEEEE*
Ga0066679_107850882	3300005176	Soil	VSYSLDQNSEYALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEEE*
Ga0066685_103658062	3300005180	Soil	MSYSLPPDTEYSLLQLILYVFSFVTLVLIFFYIASERPGEKKKKEEEED*
Ga0070708_1000285168	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSYSLPPDQEYALLQLLLYIFSFVSLILIFLYIAAERPGEAKKKAAEEEE*
Ga0066686_106150992	3300005446	Soil	MSYSLDPNSEYALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE*
Ga0070699_1000126812	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSYSLPPDQEFALLQLLLYIFSFISLILIFLYIAAERPGEAKKKAAEEEE*
Ga0066697_100856662	3300005540	Soil	MSYSLAPEQEFALLQLLLYIFSFVTLIMIFLYIAAERPGEGKKKVEEEE*
Ga0066697_105138882	3300005540	Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEEE*
Ga0070732_1000042518	3300005542	Surface Soil	VSYGLSPDSEYSLLQLLLYIFSFVAIILIFFYIASERPAEKKKKDEED*
Ga0066661_101662652	3300005554	Soil	PDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE*
Ga0066661_101732042	3300005554	Soil	MSYNLLPDQEFALLQLLLYIFGFVTLIMIFLYIAAERPGEGKKKVEEEEE*
Ga0066692_110036971	3300005555	Soil	MSYNLDPNSEYALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKAEEEE*
Ga0066707_100349785	3300005556	Soil	MSYSLPSDQEFALLQLLLYIFSFVALILIFLYIAAERPGEGKKKAAEEEE*
Ga0066699_100307722	3300005561	Soil	MSYSLLPDQEFALLQLLLYIFSFVTLIMIFLYIAAERPGEGKKKVEEEEE*
Ga0066703_102216861	3300005568	Soil	DMSYNLDPNSEYALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKAEEEEE*
Ga0066703_102921523	3300005568	Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE*
Ga0066691_104379602	3300005586	Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGESKKKAVEEEE*
Ga0066656_103838882	3300006034	Soil	MSYSLQPEQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE*
Ga0066656_105939071	3300006034	Soil	MSYSLQPDQEFALLQLLLYIFSFVTLILIFLYIAAERP
Ga0066658_1000001438	3300006794	Soil	MSYNLLPDQEFALLQLLLYIFSFVTLIMIFLYIAAERPGEGKKKVEEEEE*
Ga0079220_106897542	3300006806	Agricultural Soil	MSYNLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEAKKKSEEEE*
Ga0099791_100734202	3300007255	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVTLILIFLYIAAERPGEAKKKAAEEEE*
Ga0099791_105041112	3300007255	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEAKKKAEEEE*
Ga0099791_106591741	3300007255	Vadose Zone Soil	GFRERTGQADMSYNLPTDQQYALLQLLLYIFSFVSLILIFLYIAAERPGEGKKKAAEEEE
Ga0099793_100091492	3300007258	Vadose Zone Soil	MSYNLDPNQEFALLQLLLYIFSFVSLILIFLYIAAERPGEAKKKAAEEEE*
Ga0099793_100568272	3300007258	Vadose Zone Soil	MSYSLPPDQGYALLQLLLYIFSFVSLVLIFLYIAAERPGEAKKKVEEEEE*
Ga0099793_102665701	3300007258	Vadose Zone Soil	MSYNLDPNQEFALLQLLLYIFSFVALILIFLYIAAERPGEGKKKAAEEEE*
Ga0099794_101356512	3300007265	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAEEEE*
Ga0099794_102796772	3300007265	Vadose Zone Soil	MSYNLQPDQQYALIQLLLYIFSFLALILIFLYIAAERPGESKKKVEEEE*
Ga0099794_104844702	3300007265	Vadose Zone Soil	MSYSLPPDQEFALLQLILYIFSFVSLILIFLYIAAERPGEAKKKVEEEEE*
Ga0099794_108053061	3300007265	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFVTLVLIFLYIAAERPGEAKKKAEEEEE*
Ga0066710_1034292851	3300009012	Grasslands Soil	EPADMSYSLQPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGESKKKVAEEEE
Ga0099829_100720672	3300009038	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFATLILIFLYIAAERPGEAKKKAAEEEE*
Ga0099829_103537122	3300009038	Vadose Zone Soil	MSYNLQPDQQFALLQLLLYIFSFLTLILIFLYIAAERPGESKKKVEEEEE*
Ga0099829_103726823	3300009038	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAEEEEE*
Ga0099829_105538213	3300009038	Vadose Zone Soil	VSYNPSPDAQFQILQLILYIFSFVALILIFLYIAAERPGETKKKEEEEE*
Ga0099829_115395171	3300009038	Vadose Zone Soil	MSYSLPADQEFALLQLLLYIFSFVSLILIFLYIAAERPGEAKKKAAEEEE*
Ga0099830_103785772	3300009088	Vadose Zone Soil	DQEFALLQLLLYIFSFATLILIFLYIAAERPGEGQKKAAEEEE*
Ga0099830_107807662	3300009088	Vadose Zone Soil	VSYNPSPDTQFQILQLILYIFSFVALIHIFLYIAAERPGETKKKEEEEEE*
Ga0099830_109464532	3300009088	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVSLILIFLYIAAERPGEARKKAAEEEE*
Ga0099828_100271463	3300009089	Vadose Zone Soil	VSYNPSPDTQFQILQLILYIFSFVALILIFLYIAAERPGETKKKEEEEE*
Ga0099828_110934682	3300009089	Vadose Zone Soil	MSYSLPPDQGYALLQLLLYIFSFVSLILIFLYIAAERPGEGKKKPAEEEE*
Ga0099827_100095783	3300009090	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVSLILIFLYIAAERPGEGKKKAAEEEE*
Ga0099827_101310352	3300009090	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEEE*
Ga0099827_103802162	3300009090	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKAAEEEE*
Ga0099827_114544942	3300009090	Vadose Zone Soil	MSYNLQPDQQYALIQLLLYIFSFLTLILIFLYIAAERPGESKKKVEEEEE*
Ga0099827_119611272	3300009090	Vadose Zone Soil	MSYSLPADQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAEEEEEE*
Ga0134080_100048743	3300010333	Grasslands Soil	MSYSLLPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE*
Ga0134063_104356551	3300010335	Grasslands Soil	MSYTLQPHQEFALLELLLYILSFVTLILIFLYIAAERPGESKKKV
Ga0134071_104539292	3300010336	Grasslands Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEAKKKVEEEEE*
Ga0137392_102340232	3300011269	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVSLILIFLYIAAERPREGRKKAAEEEE*
Ga0137392_110846582	3300011269	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAVEEEE*
Ga0137391_101254882	3300011270	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEAKKKAAEEEE*
Ga0137391_102985552	3300011270	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKAEEEEE*
Ga0137391_111572711	3300011270	Vadose Zone Soil	ADMSYSLPPDQGYALLQLLLYIFSFVSLILIFLYIAAERPGEAKKKAVEEEEE*
Ga0137393_115326201	3300011271	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVSLILIFLYIAAERPGEGKKKAAEE
Ga0137389_104096332	3300012096	Vadose Zone Soil	MSYNLQPDQEYALLQLLLYIFSFVTLILIFLYIAAERPGESKKKVEEEEE*
Ga0137388_108069261	3300012189	Vadose Zone Soil	MSYNLQPDQEYALLQLLLYIFSFLTLILIFLYIAAERPGESKKKVEEEEE*
Ga0137383_105247102	3300012199	Vadose Zone Soil	MSYNLDPNQEFALLQLLLYIFSFATLILIFLYIAAERPGEAKKKAAEEEE*
Ga0137383_112113932	3300012199	Vadose Zone Soil	MSYNLDPNQEFALLQLLLYIFSFVTLILIFLYIAAERPGEAKKKAAEEEE*
Ga0137365_1000429210	3300012201	Vadose Zone Soil	MSYSLPSDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEAKKKVEEEEE*
Ga0137399_100136792	3300012203	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVSLILIFLYIAAERPGEGRKKAEEEEE*
Ga0137399_100274192	3300012203	Vadose Zone Soil	MSYNLQPDQQFALLQLLLYIFSFVTLILIFLYIAAERPGESKKKVEEEEE*
Ga0137399_100787603	3300012203	Vadose Zone Soil	MSYSLPPDQEFALIQLLLYIFSFVCLILIFLYIAAERPGEARKKAEEEEE*
Ga0137399_101278943	3300012203	Vadose Zone Soil	LSYSLPPDQEFALLQLLLYIFSFVSLILIFLYIAAERPGEAKKKTPEEEE*
Ga0137399_110451392	3300012203	Vadose Zone Soil	MSYNLDPNQEFALLQLLLYIFSFVTLIMIFLYIAAERPGESRKKVEEEEE*
Ga0137380_113105311	3300012206	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVTLILIFLYIAAERPGEAKKKAAE
Ga0137381_115616901	3300012207	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVTLVLIFLYIAAERPGEAKKKAVEEEE*
Ga0137378_109686601	3300012210	Vadose Zone Soil	QEFALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEE*
Ga0137387_100419282	3300012349	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGESKKKVAEEEE*
Ga0137375_100734844	3300012360	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPG*
Ga0137361_107881472	3300012362	Vadose Zone Soil	MSYNLDPNQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGRKKAAEEEE*
Ga0137390_106994652	3300012363	Vadose Zone Soil	MSYNLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAVEEEE*
Ga0137396_100055268	3300012918	Vadose Zone Soil	LSYNLPPDQEFALLQLLLYIFSFVALILIFLYIAAERPGEAKKKVEEEEE*
Ga0137396_100577424	3300012918	Vadose Zone Soil	MSYSLPPDQEFALIQLLLYIFSFVCLILIFLYIAGEGPGEARKKAEEEEEYIVLADD*
Ga0137416_105825543	3300012927	Vadose Zone Soil	MSYSLPPDQGYALLQLLLYIFSFATLVLIFLYIAAERPGESKKKAAEEEE*
Ga0134087_102413422	3300012977	Grasslands Soil	YSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE*
Ga0134087_104539062	3300012977	Grasslands Soil	MSYSLQPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVE
Ga0134069_11316182	3300017654	Grasslands Soil	MSYSLLPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE
Ga0066655_103414682	3300018431	Grasslands Soil	MSYSLDPNSEYALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE
Ga0066655_108687222	3300018431	Grasslands Soil	MSYSLPPDTEYSLLQLILYIFSFVTLVLIFFYIASERPGEKRKKEEEE
Ga0066655_112190532	3300018431	Grasslands Soil	MSYSLQPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGESKKKVAEEEE
Ga0066662_100359013	3300018468	Grasslands Soil	MSYNLDPNSEYALLQLLLYIFSFVTLVLIFLYVAAERPGEGKKKAEEEEE
Ga0066662_117646112	3300018468	Grasslands Soil	MSYSLPPEQEFALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKAEEEEE
Ga0215015_101032012	3300021046	Soil	MSYNLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKAEEEEE
Ga0215015_102561063	3300021046	Soil	VSYNLQPDQQYALLQLLLYIFSFVSMILIFLYIAAERPGESKKKAEEEEE
Ga0210404_100845261	3300021088	Soil	MSYNLDPNQEFALLQLLLYIFSFVSLILIFLYIAAER
Ga0137417_10701842	3300024330	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAVEEEE
Ga0209235_100039220	3300026296	Grasslands Soil	MSYSLPPDQGYALLQLLLYIFSFVSLVLIFLYIAAERPGEAKKKAAEEEE
Ga0209235_10033056	3300026296	Grasslands Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGESKKKVEEEE
Ga0209235_10257032	3300026296	Grasslands Soil	MSYNLDPNSEYALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEE
Ga0209235_12626091	3300026296	Grasslands Soil	MSYSLDPNSEYALLQLLLYIFSFVTLILIFLYIASERPGEGKKKV
Ga0209237_11885131	3300026297	Grasslands Soil	MSYSLPPDQEFALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKAEEEE
Ga0209236_100050218	3300026298	Grasslands Soil	LSYSLPPDQGFALLQLLLYIFSFVSLILIFLYIAAERPGEAKKKTAEEEE
Ga0209236_11907002	3300026298	Grasslands Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEAKKKVEEEEE
Ga0209055_10248782	3300026309	Soil	MSYSLQPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE
Ga0209055_11958621	3300026309	Soil	MSYNLLPDQEFALLQLLLYIFSFVTLIMIFLYIAAERPGEG
Ga0209154_10099623	3300026317	Soil	MSYSLDQNSEYALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEEE
Ga0209471_10228592	3300026318	Soil	MSYNLDPNQEFALLQLLLYILSFVSLILIFLYIAAERPGEAKKKAAEEEE
Ga0209152_1000009323	3300026325	Soil	MSYNLLPDQEFALLQLLLYIFSFVTLIMIFLYIAAERPGEGKKKVEEEEE
Ga0209802_100072423	3300026328	Soil	MSYNLDPNSEYALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEEE
Ga0209377_12484652	3300026334	Soil	MSYNLDPNSEYALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKAEEEE
Ga0209057_10161782	3300026342	Soil	MSYSLQPEQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKVEEEE
Ga0257169_10743002	3300026469	Soil	MSYNLPTDQQYALLQLLLYIFSFVSLILIFLYIAAERPGE
Ga0257165_10932911	3300026507	Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEAKKKAEEEE
Ga0209056_100250224	3300026538	Soil	MSYSLPPDTEYSLLQLILYIFSFVTLVLIFFYIASERPGEKRKKEEEED
Ga0209161_100033392	3300026548	Soil	MSYSLPSDQEFALLQLLLYIFSFVALILIFLYIAAERPGEGKKKAAEEEE
Ga0209648_103836902	3300026551	Grasslands Soil	MSYSLPSDQEFALLQLLLYIFSFVALIMIFLYIAAERPGEAKKKAAEEEE
Ga0209076_10836132	3300027643	Vadose Zone Soil	MSYNLDPNQEFALLQLLLYIFSFVALILIFLYIAAERPGEGKKKAAEEEE
Ga0209388_10385012	3300027655	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVTLILIFLYIAAERPGEAKKKAAEEEE
Ga0209588_10372643	3300027671	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAEEEE
Ga0209689_10181886	3300027748	Soil	MSYNLDPNSEYALLQLLLYIFSFATLVLIFLYIAAERPGEGKKKA
Ga0209180_101893673	3300027846	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAEEEEE
Ga0209180_105483331	3300027846	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFATLILIFLYIAAERPGEAKKKAAEEEE
Ga0209701_100266272	3300027862	Vadose Zone Soil	VSYNPSPDAQFQILQLILYIFSFVALILIFLYIAAERPGETKKKEEEEE
Ga0209701_104963032	3300027862	Vadose Zone Soil	MSYNLQPDQQFALLQLLLYIFSFLTLILIFLYIAAERPGESKKKVEEEEE
Ga0209701_107101762	3300027862	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKA
Ga0209283_100156545	3300027875	Vadose Zone Soil	MSYSLPADQEFALLQLLLYIFSFATLILIFLYIAAERPGEGKKKAEEEEEE
Ga0209283_104560672	3300027875	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFVTLVLIFLYIAAERPGEAKKKAEEEEE
Ga0209283_104972642	3300027875	Vadose Zone Soil	MSYSLPPDQEYALLQLLLYIFSFVSLILIFLYIAAERPGEAKKKAAEEEE
Ga0209590_100465442	3300027882	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVSLILIFLYIAAERPGEGKKKAAEEEE
Ga0209590_101112592	3300027882	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFVTLVLIFLYIAAERPGEGKKKAEEEEE
Ga0209590_101208653	3300027882	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKAAEEEE
Ga0209590_103387992	3300027882	Vadose Zone Soil	MSYSLPPDQEFALLQLLLYIFSFITLILIFLYIAAERPGEGKKKAEEEEE
Ga0137415_100141042	3300028536	Vadose Zone Soil	MSYNLPTDQQYALLQLLLYIFSFVTLILIFLYIAAERPGEGKKKAAEEEE
Ga0137415_102261823	3300028536	Vadose Zone Soil	MSYSLPPDQEFALIQLLLYIFSFVCLILIFLYIAAERPGEARKKAEEEEE
Ga0137415_111152262	3300028536	Vadose Zone Soil	MSYNLDPNQEFALLQLLLYIFSFVSLILIFLYIAAERPGEAKKKAAEEEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050273

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences