Metagenome / Metatranscriptome Family F050266

Overview

Basic Information

• Family ID: F050266
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 145
• Average Sequence Length: 41 residues
• Representative Sequence: PVDIVTEVINRAEHALATSLVQGPGKVVALGPALAAGAVA
• Number of Associated Samples: 129
• Number of Associated Scaffolds: 145

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 2.76 %
• % of genes near scaffold ends (potentially truncated): 97.24 %
• % of genes from short scaffolds (< 2000 bps): 90.34 %
• Associated GOLD sequencing projects: 117
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (87.586 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.414 % of family members)
• Environment Ontology (ENVO): Unclassified (26.897 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (58.621 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 54.41%
  β-sheet: 0.00%
  Coil/Unstructured: 45.59%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00108	Thiolase_N	43.45
PF00903	Glyoxalase	13.10
PF02803	Thiolase_C	10.34
PF02737	3HCDH_N	1.38
PF05163	DinB	1.38
PF12681	Glyoxalase_2	1.38
PF12762	DDE_Tnp_IS1595	1.38
PF02810	SEC-C	0.69
PF00581	Rhodanese	0.69
PF13643	DUF4145	0.69
PF01590	GAF	0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	53.79
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.38
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	1.38
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.38
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.38
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.38
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	1.38
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	1.38
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.38

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.59 %
Unclassified	root	N/A	12.41 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.59 %
Unclassified	root	N/A	12.41 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.59 %
Unclassified	root	N/A	12.41 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	53.79 %
Unclassified	root	N/A	12.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.34 %

Level 5

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.10 %
Unclassified	root	N/A	12.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.07 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.10 %
Unclassified	root	N/A	12.41 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.34 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.07 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.10 %
Unclassified	root	N/A	12.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.34 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.07 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.10 %
Unclassified	root	N/A	12.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.34 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.69 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001082|JGI12664J13189_1001205	All Organisms → cellular organisms → Bacteria	3274
3300001166|JGI12694J13545_1022249	All Organisms → cellular organisms → Bacteria	586
3300001471|JGI12712J15308_10051752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042
3300001661|JGI12053J15887_10177046	All Organisms → cellular organisms → Bacteria	1100
3300002245|JGIcombinedJ26739_100495792	All Organisms → cellular organisms → Bacteria	1098
3300002907|JGI25613J43889_10118519	All Organisms → cellular organisms → Bacteria	672
3300004080|Ga0062385_10122310	All Organisms → cellular organisms → Bacteria	1300
3300004635|Ga0062388_100475464	All Organisms → cellular organisms → Bacteria	1111
3300005184|Ga0066671_10299749	All Organisms → cellular organisms → Bacteria	1008
3300005332|Ga0066388_105672841	All Organisms → cellular organisms → Bacteria	632
3300005434|Ga0070709_11633336	All Organisms → cellular organisms → Bacteria → Acidobacteria	525
3300005537|Ga0070730_10016099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5941
3300005541|Ga0070733_10478900	All Organisms → cellular organisms → Bacteria	832
3300005542|Ga0070732_10698276	Not Available	617
3300005564|Ga0070664_100691722	All Organisms → cellular organisms → Bacteria	949
3300005568|Ga0066703_10680998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593
3300005591|Ga0070761_10115068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1559
3300005591|Ga0070761_10864927	All Organisms → cellular organisms → Bacteria	571
3300005610|Ga0070763_10907044	Not Available	525
3300005712|Ga0070764_11112007	All Organisms → cellular organisms → Bacteria → Acidobacteria	501
3300005764|Ga0066903_107599433	All Organisms → cellular organisms → Bacteria	559
3300005921|Ga0070766_10168775	All Organisms → cellular organisms → Bacteria → Acidobacteria	1351
3300005921|Ga0070766_10691181	All Organisms → cellular organisms → Bacteria → Acidobacteria	690
3300006028|Ga0070717_11942002	All Organisms → cellular organisms → Bacteria	531
3300006050|Ga0075028_100348247	All Organisms → cellular organisms → Bacteria → Acidobacteria	836
3300006794|Ga0066658_10724600	All Organisms → cellular organisms → Bacteria	552
3300006794|Ga0066658_10743371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546
3300006800|Ga0066660_11203191	Not Available	595
3300006893|Ga0073928_10574404	All Organisms → cellular organisms → Bacteria	799
3300006954|Ga0079219_12055437	All Organisms → cellular organisms → Bacteria	545
3300007982|Ga0102924_1202733	All Organisms → cellular organisms → Bacteria → Acidobacteria	858
3300007982|Ga0102924_1222471	Not Available	800
3300009012|Ga0066710_102470541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752
3300009029|Ga0066793_10283171	All Organisms → cellular organisms → Bacteria	959
3300009090|Ga0099827_11863660	All Organisms → cellular organisms → Bacteria → Acidobacteria	524
3300009520|Ga0116214_1104522	Not Available	1042
3300009624|Ga0116105_1042340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023
3300009635|Ga0116117_1150704	All Organisms → cellular organisms → Bacteria	599
3300009645|Ga0116106_1120722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844
3300009683|Ga0116224_10435899	All Organisms → cellular organisms → Bacteria	624
3300009759|Ga0116101_1195858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514
3300009760|Ga0116131_1103906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849
3300009762|Ga0116130_1255102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558
3300009824|Ga0116219_10779583	Not Available	521
3300010043|Ga0126380_12181476	All Organisms → cellular organisms → Bacteria → Acidobacteria	511
3300010046|Ga0126384_12147802	Not Available	536
3300010048|Ga0126373_10456755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1313
3300010379|Ga0136449_100420488	All Organisms → cellular organisms → Bacteria → Acidobacteria	2361
3300010398|Ga0126383_13190946	Not Available	535
3300012205|Ga0137362_11072313	Not Available	685
3300012927|Ga0137416_11828283	All Organisms → cellular organisms → Bacteria	555
3300012971|Ga0126369_13223848	All Organisms → cellular organisms → Bacteria → Acidobacteria	534
3300012988|Ga0164306_11514012	All Organisms → cellular organisms → Bacteria → Acidobacteria	575
3300014201|Ga0181537_10167804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507
3300014489|Ga0182018_10260704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	952
3300014657|Ga0181522_10399858	All Organisms → cellular organisms → Bacteria → Acidobacteria	821
3300014838|Ga0182030_10536782	All Organisms → cellular organisms → Bacteria	1152
3300016294|Ga0182041_10944657	All Organisms → cellular organisms → Bacteria → Acidobacteria	777
3300017927|Ga0187824_10170923	All Organisms → cellular organisms → Bacteria → Acidobacteria	728
3300017955|Ga0187817_11100233	All Organisms → cellular organisms → Bacteria → Acidobacteria	510
3300017970|Ga0187783_10608933	All Organisms → cellular organisms → Bacteria → Acidobacteria	790
3300017975|Ga0187782_10257661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312
3300017975|Ga0187782_11068307	All Organisms → cellular organisms → Bacteria → Acidobacteria	629
3300018007|Ga0187805_10027437	All Organisms → cellular organisms → Bacteria	2517
3300018022|Ga0187864_10225185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	873
3300018026|Ga0187857_10067066	All Organisms → cellular organisms → Bacteria	1795
3300018038|Ga0187855_10177642	All Organisms → cellular organisms → Bacteria	1262
3300018038|Ga0187855_10836319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537
3300018058|Ga0187766_11208699	All Organisms → cellular organisms → Bacteria → Acidobacteria	547
3300018086|Ga0187769_10907045	All Organisms → cellular organisms → Bacteria → Acidobacteria	667
3300018086|Ga0187769_11039485	All Organisms → cellular organisms → Bacteria → Acidobacteria	620
3300018482|Ga0066669_11403591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633
3300019888|Ga0193751_1000667	All Organisms → cellular organisms → Bacteria	25212
3300020579|Ga0210407_10628630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836
3300020579|Ga0210407_11294515	All Organisms → cellular organisms → Bacteria	545
3300020580|Ga0210403_11098168	Not Available	618
3300020582|Ga0210395_10964615	Not Available	632
3300020582|Ga0210395_11444151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501
3300021168|Ga0210406_10267527	All Organisms → cellular organisms → Bacteria	1398
3300021168|Ga0210406_10803639	All Organisms → cellular organisms → Bacteria → Acidobacteria	715
3300021181|Ga0210388_11524945	All Organisms → cellular organisms → Bacteria → Acidobacteria	557
3300021401|Ga0210393_10235872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1482
3300021405|Ga0210387_11096442	All Organisms → cellular organisms → Bacteria → Acidobacteria	694
3300021407|Ga0210383_11464031	All Organisms → cellular organisms → Bacteria → Acidobacteria	566
3300021432|Ga0210384_10258659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1567
3300021433|Ga0210391_10259179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365
3300021474|Ga0210390_11649847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503
3300021478|Ga0210402_10971950	All Organisms → cellular organisms → Bacteria → Acidobacteria	776
3300023255|Ga0224547_1012697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067
3300025414|Ga0208935_1016103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1000
3300025442|Ga0208034_1041999	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005
3300025906|Ga0207699_10962739	All Organisms → cellular organisms → Bacteria → Acidobacteria	630
3300025914|Ga0207671_10805791	All Organisms → cellular organisms → Bacteria → Acidobacteria	745
3300025939|Ga0207665_10570491	All Organisms → cellular organisms → Bacteria → Acidobacteria	881
3300025945|Ga0207679_10804172	All Organisms → cellular organisms → Bacteria	857
3300026320|Ga0209131_1047727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2428
3300026551|Ga0209648_10113182	All Organisms → cellular organisms → Bacteria → Acidobacteria	2203
3300027559|Ga0209222_1067574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688
3300027609|Ga0209221_1094652	Not Available	771
3300027652|Ga0209007_1025015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1537
3300027684|Ga0209626_1215143	All Organisms → cellular organisms → Bacteria → Acidobacteria	509
3300027745|Ga0209908_10014429	All Organisms → cellular organisms → Bacteria	1404
3300027745|Ga0209908_10084343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	763
3300027867|Ga0209167_10310648	All Organisms → cellular organisms → Bacteria → Acidobacteria	853
3300027879|Ga0209169_10495315	All Organisms → cellular organisms → Bacteria → Acidobacteria	642
3300027879|Ga0209169_10608706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570
3300027882|Ga0209590_10580009	All Organisms → cellular organisms → Bacteria	722
3300028047|Ga0209526_10989891	Not Available	503
3300028536|Ga0137415_11489375	All Organisms → cellular organisms → Bacteria → Acidobacteria	502
3300028759|Ga0302224_10373096	All Organisms → cellular organisms → Bacteria → Acidobacteria	578
3300028806|Ga0302221_10063098	Not Available	1678
3300028906|Ga0308309_10656449	All Organisms → cellular organisms → Bacteria → Acidobacteria	911
3300029945|Ga0311330_10527767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	944
3300029952|Ga0311346_10842671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766
3300029999|Ga0311339_11569923	All Organisms → cellular organisms → Bacteria → Acidobacteria	582
3300030524|Ga0311357_10608221	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004
3300030688|Ga0311345_11155937	All Organisms → cellular organisms → Bacteria → Acidobacteria	567
3300030760|Ga0265762_1017020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1321
3300030879|Ga0265765_1068935	All Organisms → cellular organisms → Bacteria → Acidobacteria	510
3300030991|Ga0073994_10011878	All Organisms → cellular organisms → Bacteria	1032
3300031057|Ga0170834_113702062	All Organisms → cellular organisms → Bacteria → Acidobacteria	595
3300031234|Ga0302325_10681998	Not Available	1486
3300031234|Ga0302325_12703864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585
3300031236|Ga0302324_100310115	All Organisms → cellular organisms → Bacteria → Acidobacteria	2413
3300031249|Ga0265339_10114468	All Organisms → cellular organisms → Bacteria → Acidobacteria	1392
3300031525|Ga0302326_10330477	All Organisms → cellular organisms → Bacteria → Acidobacteria	2413
3300031708|Ga0310686_117148146	All Organisms → cellular organisms → Bacteria → Acidobacteria	710
3300031718|Ga0307474_10440180	All Organisms → cellular organisms → Bacteria	1018
3300031754|Ga0307475_10803526	All Organisms → cellular organisms → Bacteria → Acidobacteria	746
3300031823|Ga0307478_10099023	All Organisms → cellular organisms → Bacteria → Acidobacteria	2255
3300031823|Ga0307478_11542499	All Organisms → cellular organisms → Bacteria → Acidobacteria	549
3300031894|Ga0318522_10309108	Not Available	599
3300031947|Ga0310909_10493339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027
3300031962|Ga0307479_10541929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1146
3300032160|Ga0311301_10338299	All Organisms → cellular organisms → Bacteria → Acidobacteria	2367
3300032160|Ga0311301_13054186	Not Available	501
3300032205|Ga0307472_101015389	All Organisms → cellular organisms → Bacteria → Acidobacteria	778
3300032782|Ga0335082_11387933	All Organisms → cellular organisms → Bacteria	572
3300032783|Ga0335079_10234988	All Organisms → cellular organisms → Bacteria → Acidobacteria	2021
3300032892|Ga0335081_10298906	All Organisms → cellular organisms → Bacteria → Acidobacteria	2134
3300032892|Ga0335081_12361189	All Organisms → cellular organisms → Bacteria → Acidobacteria	554
3300032954|Ga0335083_10018915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8009
3300033004|Ga0335084_12146105	Not Available	542
3300033545|Ga0316214_1044180	All Organisms → cellular organisms → Bacteria → Acidobacteria	642
3300033826|Ga0334847_031279	All Organisms → cellular organisms → Bacteria → Acidobacteria	598

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.55%
Host-Associated	Host-Associated	3.45%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.69%
Aquatic	Environmental → Aquatic	15.86%
Plants	Host-Associated → Plants	3.45%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.72%
Freshwater	Environmental → Aquatic → Freshwater	13.10%
Peat	Environmental → Terrestrial → Peat	8.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.76%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.07%
Sediment	Environmental → Aquatic → Sediment	0.69%
Roots	Host-Associated → Plants → Roots	0.69%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.76%
Loam	Environmental → Terrestrial → Soil → Loam	17.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.97%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.69%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.07%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.69%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.14%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.07%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.07%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.07%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.38%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	1.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.38%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.69%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.69%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.69%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.69%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300029945	I_Bog_N2 coassembly	Environmental
3300029952	II_Bog_N3 coassembly	Environmental
3300029999	I_Palsa_E3 coassembly	Environmental
3300030524	II_Palsa_N3 coassembly	Environmental
3300030688	II_Bog_N2 coassembly	Environmental
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12664J13189_10012056	3300001082	Forest Soil	YDAVDVVTEVINRAEQALALSQAQGSGKAVVLGPALAAGAVA*
JGI12694J13545_10222492	3300001166	Forest Soil	SYDPVDIVTEVINRAEFALATSVAQGPGKVVALGAALAAGAVA*
JGI12712J15308_100517522	3300001471	Forest Soil	RAEYDPADVVTEVINRAEHALGQAMAQGPGKIVALGQALAAGAVA*
JGI12053J15887_101770462	3300001661	Forest Soil	QEYDPVDIVTEVINRAEHALATSVVQGPGKVVALGPALAAGAVA*
JGIcombinedJ26739_1004957921	3300002245	Forest Soil	EVINRAEHALHTSLGQGHGKIVALGAARAAGAVA*
JGI25613J43889_101185192	3300002907	Grasslands Soil	SYDPVDIVTEVINRAEHALATSLVQGPGKVVALAAALAAGAVA*
Ga0062385_101223103	3300004080	Bog Forest Soil	IRAEYDPADVVTEVINRAEHALSQAMAQGPGKIVALGQAMAAGAVA*
Ga0062388_1004754641	3300004635	Bog Forest Soil	AVVKESYDPVDIVTEVINRAEHALASSLAQGHGKVVALGAALAAGAVA*
Ga0066671_102997491	3300005184	Soil	SYDPVDIVTEVINRVEHALATSLVQGPGKVVALGAALAAGAVA*
Ga0066388_1056728412	3300005332	Tropical Forest Soil	RTEFDPVDVVTEVINRVEHALGQATGQGLGHVVALGPTALAAGAVA*
Ga0070709_116333361	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DPIDVVTEVINRAEHALQQAVAQGPGKVVALGPAALAAGAVA*
Ga0070730_100160997	3300005537	Surface Soil	EVINRVEHALAQAMAKGPGHVVAQGPAALAEGAVA*
Ga0070733_104789001	3300005541	Surface Soil	YDPIDVVTEVINRAEHALQQAMAQGPGKVVALGPAALAAGAVA*
Ga0070732_106982762	3300005542	Surface Soil	HTDYDPLDVVTEVINRAEHALVQAMAQGPGKIVALGPALATGAVA*
Ga0070664_1006917221	3300005564	Corn Rhizosphere	DPIDVVTEIINRVEYALSQAVAQGPAKVVALEPAALAAGAVA*
Ga0066703_106809984	3300005568	Soil	EVINRAEHALAVALTQGTGKVTALGAALAAGAVA*
Ga0070761_101150681	3300005591	Soil	DSIDIVTEVINRAEHALASSLAQGPGKIVALGAALATGAVA*
Ga0070761_108649271	3300005591	Soil	AEAVIKESYDPVDIVTEVINRAEHALATSLAHGLGKVVVLVAALAAGAVA*
Ga0070763_109070441	3300005610	Soil	TEVINRAEHALAQSLTQGPGKVVALSAALAAGAVA*
Ga0070764_111120071	3300005712	Soil	IVTEVINRAEHALTTSLAHGLGKVVVLVAALAAGAVA*
Ga0066903_1075994332	3300005764	Tropical Forest Soil	RSEYDPADIVTEVINRVEHALGQAMGQGLGHVVALGPTALASGAVA*
Ga0070766_101687751	3300005921	Soil	IVTEVINRAEHALATSLGQGPGKVVALGPALAAGAVA*
Ga0070766_106911811	3300005921	Soil	PIDVVTEIINRAEHALSQAMAQGPGKVVALGPAALAATAVA*
Ga0070717_119420021	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRENYDPVDIVTEVINRAEHALAVALTQGPGKVTALGAALAAGAVA*
Ga0075028_1003482472	3300006050	Watersheds	DPVDIVTEVINRAEYALSQAMAQGPGKVVALGPTALAEGAVA*
Ga0066658_107246003	3300006794	Soil	EYDPLDVVTEIINRAEQALAQAMAQGPGRVVALGPAALAAGAVA*
Ga0066658_107433712	3300006794	Soil	VIRAEYDPIDVVTEIINRVEYALSQAVAQGPAKVVALEPAALAAGAVA*
Ga0066660_112031912	3300006800	Soil	DIVTEVINRAEHALATSLVQGPGKVVALGAALAAGAVA*
Ga0073928_105744041	3300006893	Iron-Sulfur Acid Spring	YDPVDIVTEVINRAEHALATSLVQGPGKVVALGAALAAGAVA*
Ga0079219_120554372	3300006954	Agricultural Soil	VVKQDYDPVDIVTEVINRAEHALATSLVQGPGKIVALAPTLAAGAVA*
Ga0102924_12027331	3300007982	Iron-Sulfur Acid Spring	EYDPVDVVTEVINRGSQALAQAMARGPGHIVAQGAASLAECAVA*
Ga0102924_12224713	3300007982	Iron-Sulfur Acid Spring	VVTEVINRAEHALAQGMAQGPGKVVALGPALAAGAVA*
Ga0066710_1024705411	3300009012	Grasslands Soil	NYDPVDIVTEVINRAEHALSVALTHGPGKVTALGAALAAGAVA
Ga0066793_102831712	3300009029	Prmafrost Soil	TEYDPVDVVTEVINRAEHALGQAMAQGIGKVVALGPALAAGAVA*
Ga0099827_118636601	3300009090	Vadose Zone Soil	IDIVTEVINRAEHALATSLVQGPGKVVVLGAALAAGAVA*
Ga0116214_11045222	3300009520	Peatlands Soil	VDVVTEVINRAEHALSQAMAQGPGKIVALAPALAAGAVA*
Ga0116105_10423402	3300009624	Peatland	PVDIVTEVINRAEHALAQSLAQGPGKVVALSAALAAGAVA*
Ga0116117_11507042	3300009635	Peatland	ESYDPVDIVTEVINRAEFALAASTVQGPGKVVALGAALVAGAVA*
Ga0116106_11207221	3300009645	Peatland	DIVTEVINRAEFALAASLGQGPGKVMALGAALAAGAVA*
Ga0116224_104358992	3300009683	Peatlands Soil	VIRSEYDPVDVVTEVINRAEYALAQAMAQGQGKIVALGPAAMAAGAVA*
Ga0116101_11958582	3300009759	Peatland	RESYDPLDIVTEVINRAEFALATSLAQGHGKVVALGAALAAGAVA*
Ga0116131_11039063	3300009760	Peatland	EVINRAEHALATSLVQGPGKVVALGAALAAGAVA*
Ga0116130_12551021	3300009762	Peatland	IVTEVINRAEFALAASLGQGPGKVMALGAALAAGAVA*
Ga0116219_107795831	3300009824	Peatlands Soil	VTEVINRAEHALSQAMSQGPGKIIALSAALAAGAVA*
Ga0126380_121814761	3300010043	Tropical Forest Soil	TEVINRVEHALGQAMGQGLGHVVALGPTALAAGAVA*
Ga0126384_121478021	3300010046	Tropical Forest Soil	TEVINRAEHALEKSVDEGPGKAVALPAALAAAAVA*
Ga0126373_104567552	3300010048	Tropical Forest Soil	IRAEYDPVDVVTEIINRAEHALAQAVAQGPGKVVALGPAAMASGAVA*
Ga0136449_1004204884	3300010379	Peatlands Soil	TEVINRAEHALSQAMSQGPGKIVALGPALASGAVA*
Ga0126383_131909462	3300010398	Tropical Forest Soil	EFDPVDVVTEVINRVEHALSQSMTQGLGKVVALGPALAAGAVA*
Ga0137362_110723133	3300012205	Vadose Zone Soil	PVDIVTEVINRAEHALATSVVQGPGKVVALGAALAAGAVA*
Ga0137416_118282831	3300012927	Vadose Zone Soil	YDPVDIVTEVINRAEHALAVALTQGPGKVTALGAALAAGAVA*
Ga0126369_132238482	3300012971	Tropical Forest Soil	DVVTEVINRAEHALGQAMGQGLGHVVALGPTALAAGAVA*
Ga0164306_115140121	3300012988	Soil	IDVVTEIINRVEHALSQAVAQGPAKVVALGPAALAAGAVA*
Ga0181537_101678042	3300014201	Bog	NRPEYDPIDIVTEVINRAEHALTQAVNHGPGKIIALGPALAAGAVA*
Ga0182018_102607043	3300014489	Palsa	EVINRADRTLATSFVQGPGEAVALGAALATGAVA*
Ga0181522_103998581	3300014657	Bog	EVINRAEHALAQSLTQGPGKVVALSAALSAGAVA*
Ga0182030_105367821	3300014838	Bog	AVVRESYDPVDIVTEVINRAEFALAASTVQGPGKVVALGAALVTGAVA*
Ga0182041_109446571	3300016294	Soil	PVDVVTEVINRAEHALGQAMGQGLGHVVALGPTALAAGAVA
Ga0187824_101709232	3300017927	Freshwater Sediment	TEIINRVEYALSQAVAQGPGKVVALEPAALAAGAVA
Ga0187817_111002332	3300017955	Freshwater Sediment	EAVIRTEYDPVDVVTEVINRAERALSQAMAQGPGKIVVLGPASAGAVA
Ga0187783_106089331	3300017970	Tropical Peatland	DIVTEVINRAEHALATSLAHGLGKVVALGAALAAGAVA
Ga0187782_102576612	3300017975	Tropical Peatland	YDPVDVVTEIINRAEHALAQAVAQGPGKVVALGPAAMASGAVA
Ga0187782_110683071	3300017975	Tropical Peatland	DVVTEVINRAEHALHKAMAQGLGKIVAEGPAALASGAVA
Ga0187805_100274371	3300018007	Freshwater Sediment	VVTEVINRAEHALSQAMVQGLGKVMALGPAAMASGAVA
Ga0187864_102251852	3300018022	Peatland	ESYDPVDIVTEVINRAEHALATSLVQGPGKVVALGAAMATGAVA
Ga0187857_100670663	3300018026	Peatland	VDIVTEVINRAEFALAASLGQGPGKVMALGAALAAGAVA
Ga0187855_101776423	3300018038	Peatland	VTEVINRAEHALAQAMAQGPGKIIALGPALAAGAVA
Ga0187855_108363192	3300018038	Peatland	AVVKESYDPVDIVTEVINRAEHALATSLGQGHGKVVALGAAKAAGAVA
Ga0187766_112086991	3300018058	Tropical Peatland	TEVINRAEQALSQAMTQGLGKIVALAPGLAAGAVA
Ga0187769_109070452	3300018086	Tropical Peatland	VTEVINRAEFALSQAVAEGLGKIAALGPAAMAEGAVA
Ga0187769_110394852	3300018086	Tropical Peatland	DPADVVTEVINRAEHALAQAMAQGPGKIVAEGPAPLAAGAVA
Ga0066669_114035913	3300018482	Grasslands Soil	VTEIINRAEHALVQATAQGPGRVVALAPATLAAGAVA
Ga0193751_10006671	3300019888	Soil	YDPVDVVTEVINRAEHALGQAMAQGPGKVVALGPALAAGAVA
Ga0210407_106286303	3300020579	Soil	DIVTEVINRAEHALHTSLGQGHGKIVALGAARAAGAVA
Ga0210407_112945151	3300020579	Soil	RESYDPVDIVTEVINRAEHALATSLVQGPGKVVALGAALAAGAVA
Ga0210403_110981682	3300020580	Soil	TEVINRAEHALAQAMAQGPGKVVALGPAALAAGAVA
Ga0210395_109646151	3300020582	Soil	DPIDVVTEVINRAEHALAQGMAQGPGHVVALGPALAAGAVA
Ga0210395_114441512	3300020582	Soil	DPVDVVTEVINRAEHALAQAMAQGPGKIIALGPALAAGAVA
Ga0210406_102675271	3300021168	Soil	VTEVINRAEQALALSLAQGPGKIVALGPALAAGAVA
Ga0210406_108036391	3300021168	Soil	VTEVINRAEHALATSLVQGPGKVVALGAALAAGAVA
Ga0210388_115249451	3300021181	Soil	IRTEFDPIDVVTEVINRVEHALGQAMSQGLGHVVALGPTVLAAGAVA
Ga0210393_102358722	3300021401	Soil	SVTEVINRAEHALHTSLGQGHGKIVALGAARAAGAVA
Ga0210387_110964421	3300021405	Soil	YDPVDIVTEVINRAEHALAQSLAQGPGKVVALSAALAAGAVA
Ga0210383_114640312	3300021407	Soil	TEYDPADVVTEVINRAEHALAQAMAQGPGKIVALGPSTLVAGAVA
Ga0210384_102586592	3300021432	Soil	VVRESYDPVDIVTEVINRAEHALATSLVQGPGKVVALGAALAAGAVA
Ga0210391_102591791	3300021433	Soil	RTEYDPVDVVTEVINRAEHALSQAITQGPGKIVALGPALAAGAVA
Ga0210390_116498472	3300021474	Soil	IVTEVINRAEHALHTSLGQGHGKIVALAAARAAGAVA
Ga0210402_109719502	3300021478	Soil	PVDIVTEVINRAEHALATSLVQGPGKVVALGPALAAGAVA
Ga0224547_10126971	3300023255	Soil	SYDPVDIVTEVINRAEHALATSLAQGPGKVVALGAALAAGAVA
Ga0208935_10161031	3300025414	Peatland	IVTEVINRAEFALAASTVQGPGKVVALGAALVAGAVA
Ga0208034_10419992	3300025442	Peatland	VTEVINRAEHALGQAMAQGPGKVVALGPALAAGAVA
Ga0207699_109627391	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	DPIDVVTEVINRAEHALQQAVAQGPGKVVALGPAALAAGAVA
Ga0207671_108057912	3300025914	Corn Rhizosphere	VVTEIINRVEHALSQAVAQGPAKVVALGPAALAAGAVA
Ga0207665_105704912	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	DPVDVVTEVINRAEHALAQAMAQGPGKVVALGAAMAAGAVA
Ga0207679_108041723	3300025945	Corn Rhizosphere	DVVTEIINRVEYALSQAVAQGPAKVVALEPAALAAGAVA
Ga0209131_10477274	3300026320	Grasslands Soil	DPVDIVTEVINRAEHALATSLVQGPGKVVALAAALAAGAVA
Ga0209648_101131823	3300026551	Grasslands Soil	VVRENYDPVDIVTEVINRAEHALAMALTQGPGKVTALGAALAAGAVA
Ga0209222_10675742	3300027559	Forest Soil	VTEVINRAEFALATSVVQGPGKVVALGAALAAGAVA
Ga0209221_10946521	3300027609	Forest Soil	VDIVTEVINRAEHALAQSLAQGPGKVVALSAALAAGAVA
Ga0209007_10250152	3300027652	Forest Soil	DVVTEVINRAEHALSQAMAQGLGKVVTLGPAALAASAIA
Ga0209626_12151431	3300027684	Forest Soil	VIRAEYDAADVVTEVINRAEHALGQAMAQGPGKIVALGAALAASAVA
Ga0209908_100144293	3300027745	Thawing Permafrost	LQMCIRDRSYDPVDIVTEVINRAEHALATSMAQGPGKVVALGAALAAGAVA
Ga0209908_100843432	3300027745	Thawing Permafrost	SYDPVDIVTEVINRAEFALATSVVQGPGKVVALGAALAAGAVA
Ga0209167_103106481	3300027867	Surface Soil	YDPIDVVTEVINRAEHALQQAMAQGPGKVVALGPAALAAGAVA
Ga0209169_104953152	3300027879	Soil	DIVTEVINRAEHALTTSLAHGLGKVVVLVAALAAGAVA
Ga0209169_106087061	3300027879	Soil	VTEVINRAEHALASSLAQGHGKVVALGAALAAGAVA
Ga0209590_105800091	3300027882	Vadose Zone Soil	VKDSYDPIDIVTEVINRAEHALATSLVQGPGKVVVLGAALAAGAVA
Ga0209526_109898911	3300028047	Forest Soil	DIVTEVMNRAEHALAVALTNGPGKVTALGAALAAGAVA
Ga0137415_114893752	3300028536	Vadose Zone Soil	PVDIVTEVINRVEHALATSVVQGPGKVVALGPALAAGAVA
Ga0302224_103730962	3300028759	Palsa	AVVKESYDPLDIVTEVINRAEHALATSLVQGSGKVVALGAALAAVAVA
Ga0302221_100630982	3300028806	Palsa	VIRTEYDPVDVVTEVINRAEHALSQAMVQGPGKIVALGQALAAGAVA
Ga0308309_106564492	3300028906	Soil	AVVKQEYDPVDIVTEVINRAEHALAQSLVQGPGKVVALSAALAAGAVA
Ga0311330_105277671	3300029945	Bog	VRESYDPVDIVTEVINRAEFALAASTVQGPGKVVALGAALAAGAVA
Ga0311346_108426712	3300029952	Bog	VDIVTEVINRAEFALAASTVQGPGKIVALGAALVAGAVA
Ga0311339_115699232	3300029999	Palsa	SYDPVDIVTEVINRAEHALATSLAHGLGKVVVLVAALAAGAVA
Ga0311357_106082213	3300030524	Palsa	VVKQEYDPVDIVTEVINRAEHALAQSLAQGPGKVVALSAALAAGAVA
Ga0311345_111559371	3300030688	Bog	TEVINRAEHALATSLGQGPGKVVALSPALAAGAVA
Ga0265762_10170201	3300030760	Soil	QEYDPVDIVTEVINRAEHALAQSLTQGPGKVVALSAALATGAVA
Ga0265765_10689351	3300030879	Soil	PIDIVTEVINRAEHALGSSLAQGPGKVVALGAALAAGAVA
Ga0073994_100118783	3300030991	Soil	DVVTEVINRAEHALGQAMAQGPGKVVALGPALAAGAVA
Ga0170834_1137020621	3300031057	Forest Soil	YDPIDVVTEIINRAEHALGQAMAQGPGKVVALEPAALAAGAVA
Ga0302325_106819981	3300031234	Palsa	PLDIVTEVINRAEHALATSLAQGHGKIVALGAALAAGAVA
Ga0302325_127038641	3300031234	Palsa	AVVKESYDPVDIVTEVINRAEQALTNSLAQGPGKVVALGAALAAGAVA
Ga0302324_1003101153	3300031236	Palsa	IVTEVINRAEHALATSLAHGLGKVVVLVAALAAGAVA
Ga0265339_101144682	3300031249	Rhizosphere	VTEVINRAEHALSQAMAQGPGKVVALGAALAAGAVA
Ga0302326_103304773	3300031525	Palsa	DIVTEVINRAEHALATSLAHGLGKVVVLVAALAAGAVA
Ga0310686_1171481462	3300031708	Soil	DIVTEVINRAEHALASSLAQGHGKVVALGAALAAGAGA
Ga0307474_104401801	3300031718	Hardwood Forest Soil	SYDPVDIVTEVINRAEHALHTSLGQGHGKIVALGAARAAGAVA
Ga0307475_108035261	3300031754	Hardwood Forest Soil	VVTEVINRVEHALGQAMSQGLGHVVALGPTVLAAGAVA
Ga0307478_100990231	3300031823	Hardwood Forest Soil	DVVTEVINRVEHALAQAMGQGPGKIVALGPAVVAASAVA
Ga0307478_115424991	3300031823	Hardwood Forest Soil	DPIDIVTEVINRAEHALATSLVQGPGKVVALSAAMAAAAVA
Ga0318522_103091082	3300031894	Soil	DVVTEVINRVEHAVGQAMGQGLGHVVALGPTKAAGAAA
Ga0310909_104933391	3300031947	Soil	TEFDPVDVVTEVINRAEHALGQAMGQGLGHVVALGPTALAAGAVA
Ga0307479_105419291	3300031962	Hardwood Forest Soil	DPLDIVTEIINRVEHALAVALVQGPGKVVAMPAGLAAGAVA
Ga0311301_103382991	3300032160	Peatlands Soil	VTEVINRAEHALSQAMSQGPGKIVALGPALASGAVA
Ga0311301_130541861	3300032160	Peatlands Soil	VTEVINRAEHALAQAMAQGPGKVVALGPALAAGAVA
Ga0307472_1010153891	3300032205	Hardwood Forest Soil	DPVDVVTEVINRVEHALAQAMAQGPGKVVALGPALAAGAVA
Ga0335082_113879332	3300032782	Soil	EYDPVDIVTEVINRVEHALGQAMGQGLGHVVALGPTALAAGAVA
Ga0335079_102349883	3300032783	Soil	VDVVTEVINRAEHALSQAMGQGPGKVVALGPAALAAGAVA
Ga0335081_102989063	3300032892	Soil	VVTEVINRAEHALSQAMGQGPGKVVALGPAALAAGAVA
Ga0335081_123611891	3300032892	Soil	VVTEVINRAEHALSQAMSQGPGKIVALGPTALAAGAVA
Ga0335083_100189156	3300032954	Soil	VIRTEYDPIDVVTEVINRAEHALAQAMAQGPGKVVALGAALAAGAVA
Ga0335084_121461052	3300033004	Soil	IVTEVINRVEHALGQAMGQGLGHVVALGPTALAAGAVA
Ga0316214_10441801	3300033545	Roots	ESYDPIDIVTEVINRAEHALATSLVQGPGKVVALGAALAAGAVA
Ga0334847_031279_2_136	3300033826	Soil	EYDPIDVVTEVINRAEHALGQAMAQGPGKVVALGPAVLAAGAVA