Metagenome / Metatranscriptome Family F050220

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050220
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	67 residues
Representative Sequence	VETEELLSKLDLIEEQARLTLDEFPQHLTKERQRMIIALVKHIRWAIADSGPDAADDPEATVRLPS
Number of Associated Samples	103
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.38 %
% of genes near scaffold ends (potentially truncated)	19.31 %
% of genes from short scaffolds (< 2000 bps)	83.45 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.931 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (23.448 % of family members)
Environment Ontology (ENVO)	Unclassified (39.310 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (30.345 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.87% β-sheet: 0.00% Coil/Unstructured: 52.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF13488	Gly-zipper_Omp	30.71
PF03737	RraA-like	23.57
PF13441	Gly-zipper_YMGG	6.43
PF13291	ACT_4	3.57
PF01425	Amidase	3.57
PF11219	DUF3014	1.43
PF01738	DLH	1.43
PF02698	DUF218	1.43
PF10049	DUF2283	1.43
PF04143	Sulf_transp	0.71
PF04545	Sigma70_r4	0.71
PF09360	zf-CDGSH	0.71
PF12644	DUF3782	0.71
PF13450	NAD_binding_8	0.71
PF00988	CPSase_sm_chain	0.71
PF00313	CSD	0.71
PF00664	ABC_membrane	0.71
PF03992	ABM	0.71
PF00211	Guanylate_cyc	0.71
PF13646	HEAT_2	0.71
PF14196	ATC_hydrolase	0.71
PF13803	DUF4184	0.71
PF00072	Response_reg	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	23.57
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	3.57
COG0505	Carbamoylphosphate synthase small subunit	Amino acid transport and metabolism [E]	1.43
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	1.43
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	1.43
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.71
COG2391	Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains	General function prediction only [R]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.93 %
Unclassified	root	N/A	42.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.93 %
Unclassified	root	N/A	42.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.93 %
Unclassified	root	N/A	42.07 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.03 %
Unclassified	root	N/A	42.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.38 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	19.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.07 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.38 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.76 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.38 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.69 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.38 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.69 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.38 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	0.69 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.07 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.38 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.69 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0711904	All Organisms → cellular organisms → Bacteria → Proteobacteria	1087	Open in IMG/M
3300000956\|JGI10216J12902_108511470	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300003267\|soilL1_10043237	All Organisms → cellular organisms → Bacteria → Proteobacteria	2356	Open in IMG/M
3300003267\|soilL1_10086368	All Organisms → cellular organisms → Bacteria → Proteobacteria	1912	Open in IMG/M
3300003319\|soilL2_10214979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1034	Open in IMG/M
3300003321\|soilH1_10121900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1795	Open in IMG/M
3300003321\|soilH1_10121900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1795	Open in IMG/M
3300003324\|soilH2_10150715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1795	Open in IMG/M
3300003990\|Ga0055455_10100764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	850	Open in IMG/M
3300004114\|Ga0062593_100887513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300004114\|Ga0062593_100887513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300004157\|Ga0062590_101446198	Not Available	686	Open in IMG/M
3300004463\|Ga0063356_100011969	All Organisms → cellular organisms → Bacteria → Proteobacteria	7845	Open in IMG/M
3300004463\|Ga0063356_100162895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2566	Open in IMG/M
3300004463\|Ga0063356_102940902	Not Available	734	Open in IMG/M
3300005336\|Ga0070680_100241548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1527	Open in IMG/M
3300005341\|Ga0070691_10962202	Not Available	530	Open in IMG/M
3300005441\|Ga0070700_100470300	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300005458\|Ga0070681_10912733	Not Available	797	Open in IMG/M
3300005458\|Ga0070681_10912733	Not Available	797	Open in IMG/M
3300005530\|Ga0070679_101391283	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300005561\|Ga0066699_10636074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	766	Open in IMG/M
3300005576\|Ga0066708_10391005	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005981\|Ga0081538_10138648	Not Available	1126	Open in IMG/M
3300006804\|Ga0079221_10350203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	891	Open in IMG/M
3300006806\|Ga0079220_10472641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300006844\|Ga0075428_100729112	All Organisms → cellular organisms → Bacteria → Proteobacteria	1055	Open in IMG/M
3300006845\|Ga0075421_100064954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4608	Open in IMG/M
3300006845\|Ga0075421_100210260	All Organisms → cellular organisms → Bacteria → Proteobacteria	2403	Open in IMG/M
3300006845\|Ga0075421_101401267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	769	Open in IMG/M
3300006847\|Ga0075431_100413903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1348	Open in IMG/M
3300006871\|Ga0075434_102210246	Not Available	554	Open in IMG/M
3300006876\|Ga0079217_10121786	All Organisms → cellular organisms → Bacteria → Proteobacteria	1213	Open in IMG/M
3300006894\|Ga0079215_10043827	All Organisms → cellular organisms → Bacteria → Proteobacteria	1692	Open in IMG/M
3300006894\|Ga0079215_10100677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300006894\|Ga0079215_10110074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1234	Open in IMG/M
3300006894\|Ga0079215_10185737	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300006918\|Ga0079216_10413596	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300006918\|Ga0079216_10628250	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
3300007004\|Ga0079218_10284236	All Organisms → cellular organisms → Bacteria → Proteobacteria	1331	Open in IMG/M
3300007004\|Ga0079218_10536995	Not Available	1047	Open in IMG/M
3300007004\|Ga0079218_12062934	Not Available	655	Open in IMG/M
3300007004\|Ga0079218_13925403	Not Available	505	Open in IMG/M
3300007265\|Ga0099794_10076289	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300009100\|Ga0075418_11455335	Not Available	743	Open in IMG/M
3300009147\|Ga0114129_10273335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2260	Open in IMG/M
3300009444\|Ga0114945_10116539	All Organisms → cellular organisms → Bacteria → Proteobacteria	1512	Open in IMG/M
3300009444\|Ga0114945_10318374	Not Available	918	Open in IMG/M
3300009553\|Ga0105249_13203949	Not Available	526	Open in IMG/M
3300009597\|Ga0105259_1008108	All Organisms → cellular organisms → Bacteria → Proteobacteria	2015	Open in IMG/M
3300009609\|Ga0105347_1014244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2723	Open in IMG/M
3300009610\|Ga0105340_1000454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	19856	Open in IMG/M
3300009678\|Ga0105252_10059364	All Organisms → cellular organisms → Bacteria → Proteobacteria	1465	Open in IMG/M
3300009678\|Ga0105252_10522060	Not Available	548	Open in IMG/M
3300010399\|Ga0134127_13608100	Not Available	508	Open in IMG/M
3300011398\|Ga0137348_1003275	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300011402\|Ga0137356_1004383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2388	Open in IMG/M
3300011402\|Ga0137356_1025226	All Organisms → cellular organisms → Bacteria → Proteobacteria	1083	Open in IMG/M
3300011403\|Ga0137313_1008613	All Organisms → cellular organisms → Bacteria → Proteobacteria	1679	Open in IMG/M
3300011409\|Ga0137323_1012861	Not Available	1917	Open in IMG/M
3300011409\|Ga0137323_1019979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1501	Open in IMG/M
3300011416\|Ga0137422_1062522	Not Available	894	Open in IMG/M
3300011432\|Ga0137428_1014953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1952	Open in IMG/M
3300011435\|Ga0137426_1183322	Not Available	622	Open in IMG/M
3300011437\|Ga0137429_1185244	Not Available	651	Open in IMG/M
3300011439\|Ga0137432_1068283	Not Available	1085	Open in IMG/M
3300011439\|Ga0137432_1103608	Not Available	893	Open in IMG/M
3300012039\|Ga0137421_1083316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	906	Open in IMG/M
3300012122\|Ga0137332_1011894	Not Available	940	Open in IMG/M
3300012122\|Ga0137332_1047983	Not Available	506	Open in IMG/M
3300012146\|Ga0137322_1019218	Not Available	927	Open in IMG/M
3300012179\|Ga0137334_1141490	Not Available	544	Open in IMG/M
3300012232\|Ga0137435_1156762	Not Available	696	Open in IMG/M
3300012922\|Ga0137394_10378950	All Organisms → cellular organisms → Bacteria → Proteobacteria	1206	Open in IMG/M
3300014300\|Ga0075321_1035582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	835	Open in IMG/M
3300014864\|Ga0180068_1056456	Not Available	651	Open in IMG/M
3300014866\|Ga0180090_1065173	Not Available	641	Open in IMG/M
3300014872\|Ga0180087_1061533	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300014874\|Ga0180084_1071793	Not Available	707	Open in IMG/M
3300014876\|Ga0180064_1139629	Not Available	515	Open in IMG/M
3300014881\|Ga0180094_1171846	Not Available	508	Open in IMG/M
3300014885\|Ga0180063_1238351	Not Available	582	Open in IMG/M
3300015170\|Ga0120098_1015621	Not Available	889	Open in IMG/M
3300015257\|Ga0180067_1015867	Not Available	1396	Open in IMG/M
3300015259\|Ga0180085_1046696	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300018084\|Ga0184629_10291605	Not Available	858	Open in IMG/M
3300018422\|Ga0190265_10058898	All Organisms → cellular organisms → Bacteria → Proteobacteria	3401	Open in IMG/M
3300018422\|Ga0190265_10200322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2006	Open in IMG/M
3300018422\|Ga0190265_10436481	All Organisms → cellular organisms → Bacteria → Proteobacteria	1414	Open in IMG/M
3300018469\|Ga0190270_11281827	Not Available	774	Open in IMG/M
3300018469\|Ga0190270_11893838	Not Available	653	Open in IMG/M
3300018469\|Ga0190270_12103481	Not Available	624	Open in IMG/M
3300018469\|Ga0190270_12250007	Not Available	606	Open in IMG/M
3300018469\|Ga0190270_12497796	Not Available	579	Open in IMG/M
3300018476\|Ga0190274_10467007	All Organisms → cellular organisms → Bacteria → Proteobacteria	1249	Open in IMG/M
3300019360\|Ga0187894_10164760	All Organisms → cellular organisms → Bacteria → Proteobacteria	1112	Open in IMG/M
3300019377\|Ga0190264_10281957	Not Available	991	Open in IMG/M
3300019458\|Ga0187892_10002104	All Organisms → cellular organisms → Bacteria → Proteobacteria	41706	Open in IMG/M
3300019487\|Ga0187893_10014802	All Organisms → cellular organisms → Bacteria → Proteobacteria	10561	Open in IMG/M
3300020060\|Ga0193717_1014728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3557	Open in IMG/M
3300020063\|Ga0180118_1211389	Not Available	585	Open in IMG/M
3300020067\|Ga0180109_1024178	Not Available	533	Open in IMG/M
3300020131\|Ga0196972_1052601	Not Available	605	Open in IMG/M
3300020146\|Ga0196977_1122150	Not Available	597	Open in IMG/M
3300020202\|Ga0196964_10049939	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300020202\|Ga0196964_10081784	All Organisms → cellular organisms → Bacteria → Proteobacteria	1401	Open in IMG/M
3300020202\|Ga0196964_10220082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	883	Open in IMG/M
3300020202\|Ga0196964_10566052	Not Available	558	Open in IMG/M
3300020215\|Ga0196963_10140153	Not Available	1030	Open in IMG/M
3300020215\|Ga0196963_10226279	Not Available	813	Open in IMG/M
3300022563\|Ga0212128_10032150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3379	Open in IMG/M
3300022563\|Ga0212128_10212875	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300025912\|Ga0207707_11172708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	623	Open in IMG/M
3300025912\|Ga0207707_11391996	Not Available	560	Open in IMG/M
3300025912\|Ga0207707_11391996	Not Available	560	Open in IMG/M
3300027326\|Ga0209731_1014277	Not Available	1064	Open in IMG/M
3300027364\|Ga0209967_1028615	Not Available	831	Open in IMG/M
3300027395\|Ga0209996_1013100	All Organisms → cellular organisms → Bacteria → Proteobacteria	1118	Open in IMG/M
3300027513\|Ga0208685_1063033	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300027533\|Ga0208185_1000279	All Organisms → cellular organisms → Bacteria → Proteobacteria	28424	Open in IMG/M
3300027639\|Ga0209387_1050899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	911	Open in IMG/M
3300027639\|Ga0209387_1150607	Not Available	609	Open in IMG/M
3300027639\|Ga0209387_1189779	Not Available	559	Open in IMG/M
3300027639\|Ga0209387_1233588	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300027671\|Ga0209588_1066867	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300027678\|Ga0209011_1143273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	674	Open in IMG/M
3300027886\|Ga0209486_10088984	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1619	Open in IMG/M
3300027909\|Ga0209382_10182738	Not Available	2412	Open in IMG/M
3300027909\|Ga0209382_10298521	All Organisms → cellular organisms → Bacteria → Proteobacteria	1817	Open in IMG/M
3300028809\|Ga0247824_10375093	Not Available	816	Open in IMG/M
3300030511\|Ga0268241_10077247	Not Available	747	Open in IMG/M
3300031548\|Ga0307408_100148370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1849	Open in IMG/M
3300031548\|Ga0307408_100615585	Not Available	967	Open in IMG/M
3300031901\|Ga0307406_11909426	Not Available	529	Open in IMG/M
3300031903\|Ga0307407_10688301	Not Available	769	Open in IMG/M
3300032144\|Ga0315910_10016284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5589	Open in IMG/M
3300032144\|Ga0315910_10578637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	869	Open in IMG/M
3300033412\|Ga0310810_10002624	All Organisms → cellular organisms → Bacteria → Proteobacteria	19368	Open in IMG/M
3300033412\|Ga0310810_10002624	All Organisms → cellular organisms → Bacteria → Proteobacteria	19368	Open in IMG/M
3300033417\|Ga0214471_10028057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4529	Open in IMG/M
3300033417\|Ga0214471_10577919	Not Available	893	Open in IMG/M
3300033486\|Ga0316624_10085786	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300033550\|Ga0247829_10161060	All Organisms → cellular organisms → Bacteria → Proteobacteria	1756	Open in IMG/M
3300034147\|Ga0364925_0063509	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300034151\|Ga0364935_0062008	All Organisms → cellular organisms → Bacteria → Proteobacteria	1105	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.52%
Host-Associated	Host-Associated	14.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.55%
Aquatic	Environmental → Aquatic	28.97%
Plants	Host-Associated → Plants	14.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.10%
Sediment	Environmental → Aquatic → Sediment	24.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.76%
Cave	Environmental → Terrestrial → Cave	2.07%
Freshwater	Environmental → Aquatic → Freshwater	1.38%
Floodplain	Environmental → Terrestrial → Floodplain	1.38%
Marine	Environmental → Aquatic → Marine	0.69%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	24.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.34%
Loam	Environmental → Terrestrial → Soil → Loam	7.59%
Sand	Environmental → Terrestrial → Soil → Sand	5.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.45%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.07%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.38%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.38%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.69%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	24.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	18.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.21%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	5.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	2.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.38%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.38%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	23.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	12.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.90%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	5.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	4.14%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.07%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.38%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.38%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.69%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.69%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012122	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT200_2	Environmental	Open in IMG/M
3300012146	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020131	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20-13C	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_07119042	2228664021	Soil	MQTKELLSKLDLIEEQARLTLDALPHLAKERQRLIMALVKQLRWELTEGAPTLNDPESTVRLPS
JGI10216J12902_1085114702	3300000956	Soil	MQTEELLSKLDLIEEQAKHTLEEFPQHLTKERQRMIIALVKHIRWMVADEASAVGADPEATVP
soilL1_100432373	3300003267	Sugarcane Root And Bulk Soil	MQTEELLSKLEMIEEQAKHTLEEFPQHLTKERQRMIIALVKHIRWMVTETSPEAMLDPEATVPAPIVKRVA*
soilL1_100863683	3300003267	Sugarcane Root And Bulk Soil	METEELLSKLDMIEEQAKCTLEEFPQLTKERQRMIIALAKQIRWMVSENTPGAMLDPEATVPATAVKRVA*
soilL2_102149792	3300003319	Sugarcane Root And Bulk Soil	MQTEEMLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWALTDATPETAVDPESTVRLSS*
soilH1_101219003	3300003321	Sugarcane Root And Bulk Soil	VEKEDLLAKLDLIEEQARLTLDEHPRHLTKERQRMIISLAKHIRWLLNDTSEAVVRLPVDRRLS*
soilH1_101219004	3300003321	Sugarcane Root And Bulk Soil	VQSEELLSKLELIEEQARLTLDEHPRHLTRERQRMIISLAKHIRWLLNDAPSAEAAIRLPADRRLS*
soilH2_101507152	3300003324	Sugarcane Root And Bulk Soil	VEIEELLSKLELIEEQARLTLDEFPRHLTKERQRMIISLAKNIRWLMNEAANPEATIRMVDRRLS*
Ga0055455_101007641	3300003990	Natural And Restored Wetlands	VQKPEREELLAKLDLIEEQARLTLEEYPQPLKKERQRMIISLAKHIRLAARETGGALLADPEATVKLRVS*
Ga0062593_1008875132	3300004114	Soil	VETEELLSKLELIEEQARLTLDEFPKHLTKERQRMIISLAKNIRWMVNETANPEATIRMIDRRLS*
Ga0062593_1008875133	3300004114	Soil	LETEKQEREELLAKLDLIEEQARLTLEEFPQEMKKERQRMIIALVKHIRWAATDPQVSMAIDPEETVKLRVS*
Ga0062590_1014461981	3300004157	Soil	VESEELLAKLELIEEQARFTLEEFPRHLAKERQRMIISLAKHIRWLIAESGDPESTVRLIDRRLS*
Ga0063356_1000119699	3300004463	Arabidopsis Thaliana Rhizosphere	MEPKELLSKLELIEEQARRTLEEFPQNLSKERQRMIIALAKQMRWQIADSLPPRADDPEATVRLPS*
Ga0063356_1001628952	3300004463	Arabidopsis Thaliana Rhizosphere	METEELLSKLDMIEEQAKHTLEEFPQHLTKERQRMIIALVKHIRWMVSETSPTGIVDPEATVPAPVVKRVA*
Ga0063356_1029409021	3300004463	Arabidopsis Thaliana Rhizosphere	MQTKELLSKLDLIEEQARLTLDALPHLAKERQRLIMALVKQLRWELTEGAPTLNDPESTVRLPS*
Ga0070680_1002415481	3300005336	Corn Rhizosphere	MQNEELLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWAVTDSNTETAVDPESTIRLPQ*
Ga0070691_109622022	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MDADELLSKLDLIEEQARLTLEQFPAHLVPERQRMIISLAKQIRWALADARATTWEDPEATVELPS*
Ga0070700_1004703001	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MERDELLSKLEMIEEQARLTLDEYPQHLTKERQRMIIALVKHLRWEIADANRGAVEDPESTVRLPS*
Ga0070681_109127332	3300005458	Corn Rhizosphere	MEAKKQEREELLAKLDLIEEQARLTLEEFPQEMKKERQRMIIALVKHIRWAATDPQVSLAIDPEETVKLRVS*
Ga0070681_109127333	3300005458	Corn Rhizosphere	TEELLSKLELIEEQARLTLDEFPKHLTKERQRMIISLAKNIRWMVNETANPEATIRMIDRRLS*
Ga0070679_1013912831	3300005530	Corn Rhizosphere	VDTEELLSKLELIEEQARLTLDEFPRHLTKERQRMIISLAKNIRWLLSEVAEPDAEATLRMPVDRRLS*
Ga0066699_106360744	3300005561	Soil	NNAEPQVEKEELLSKLDLIEEQARLTLAEFPQHLTKERQRMIIALAKHIRWLVLDGAPAVDPEATIALPKSPLQN*
Ga0066708_103910052	3300005576	Soil	VQNEEVMAKLELIEEQARLTLDEFPRLSKERQRMIISLAKHIRWLLTNTNLDAADPEATIRLPNDRRFS*
Ga0081538_101386481	3300005981	Tabebuia Heterophylla Rhizosphere	VHTNELLSKLDLIEEQARRTMDESPQQRAKERQLMIIALVKHIRWALADTEPAALDDPEATVRLPS*
Ga0079221_103502032	3300006804	Agricultural Soil	VDTEELLSKLDLIAEQARLTLDEFPRHLTKERQRMIISLAKNIRWLLSEAANPEATIRLVDRRLS*
Ga0079220_104726412	3300006806	Agricultural Soil	VQSEELLSKLELIEEQARLTLDEHPRHLTKERQRMIISLAKHIRWLLNDTAEAALRLPADRRLS*
Ga0075428_1007291121	3300006844	Populus Rhizosphere	MPRVHVHNDELLSKLDLIEEQARRTMDEITYQRPKERQLMIIALVKHIRWAATDSTPVERIDPEATVRLSS*
Ga0075421_1000649544	3300006845	Populus Rhizosphere	MPRVHVHNDELLSKLDLIEEQARRTMDEITHQRAKERQLMIIALVKHIRWAATDSTPVERIDPEATVRLSS*
Ga0075421_1002102603	3300006845	Populus Rhizosphere	METEDLLSKLDLIEEQARRTLEEFPQHLVAERQRVIISLARHVRWALAGASPRAVEDPEATVHSDDPEATVRQPS*
Ga0075421_1014012672	3300006845	Populus Rhizosphere	METKEIFSKLDLIEEQARLTVDALPQIAKERQRMIMALVKQIRWQLTESDAEALADPEATVRLSS*
Ga0075431_1004139033	3300006847	Populus Rhizosphere	METEDLLSKLDLIEEQARRTLEEFPQHLVAERQRVIISLARHVRWALAGASPRAVEDPEATVH
Ga0075434_1022102462	3300006871	Populus Rhizosphere	VELQEQAELLAKLDLIEEQARLTLDEFPRELRKERQRMIISLVKHIRAAATDPRVSLAIDPEETVNLSAS*
Ga0079217_101217862	3300006876	Agricultural Soil	VDREELLSKLDLIEEQARLTLEDYPQHLTKERQRMIIALAKHIRWSLADPAVGDDPEATVRMPS*
Ga0079215_100438272	3300006894	Agricultural Soil	LVRSPRTYNKLESKVDREELLSKLDLIEEQARLTLEDYPQHLTKERQRMIIALAKHIRWSLADPAVGDDPEATVRMPS*
Ga0079215_101006772	3300006894	Agricultural Soil	MFVQRKELLEKLDLIEEQARLTVDALPHLAKERQRLIIAQIKQIRWSLAESAPESFDDPEDTIRLPS*
Ga0079215_101100742	3300006894	Agricultural Soil	VERDELLSKLELIEEQARLTLNEFPQHLAKERQRMIIALIKHIRWAISDTPGAADDPETTVRLPL*
Ga0079215_101857372	3300006894	Agricultural Soil	LETKELLTKLDLIEEQARLTVDALPYLAKERQRMIIALVKQIRWALSDSSGDAAPDPEATVRLPS*
Ga0079216_104135962	3300006918	Agricultural Soil	MQNEELLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWAMTDTNPETAVDPESTVRLPS*
Ga0079216_106282502	3300006918	Agricultural Soil	LETKELLTKLDLIEEQARLTVDALPYLAKERQRMIIALVKQIRWALSDSSGEAAPDPEATVRLPS*
Ga0079218_102842364	3300007004	Agricultural Soil	LGAAHLDTKELLTKLDLIEEQARLTVDALPYLAKERQRMIIALVKQIRWALSDSSGEAAQDPEATVRLPS*
Ga0079218_105369952	3300007004	Agricultural Soil	LEINELLSKLKLIEEQARLTIDEFPQHLAKERQRMIIALIKHIRWGIDDSTPGAAHDPEATVGLPS*
Ga0079218_120629342	3300007004	Agricultural Soil	VDREELLSKLDLIEEQARLTLEDYPQHLTKERQRMIIALAKHIRWSLADPAVGDDPEATVRMPS
Ga0079218_139254031	3300007004	Agricultural Soil	MQTEELLSKLELIEEQARLTIEELPRHLVQERQRMIIALTKHIRWALADARSSAAGDPEATVRLPS*
Ga0099794_100762891	3300007265	Vadose Zone Soil	LLGSLRVHNKLESPVERDELLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWGFSDRTDGLDADPEATIALPEPFQKLSS*
Ga0075418_114553351	3300009100	Populus Rhizosphere	VHNDELLSKLDLIEEQARRTMDEITYQRPKERQLMIIALVKHIRWAATDSTPVERIDPEATVRLSS*
Ga0114129_102733355	3300009147	Populus Rhizosphere	MRIHIRFASLAAQLITSWERHMQTKELLSKLDLIEEQARLTLDALPHLAKERQRLIMALVKQLRWELTEGAPTLNDPESTVRLPS*
Ga0114945_101165393	3300009444	Thermal Springs	VETQELLSKLDLIEEQARLTLDEFPQHLAKERQRMIIALVKHIRWAIADSGPDATDDPEATVRLPS*
Ga0114945_103183742	3300009444	Thermal Springs	VETEELLSKLDLIEEQARLTLDEFPQHLTKERQRMIIALVKHIRWAIADSGPDAADDPEATVRLPS*
Ga0105249_132039492	3300009553	Switchgrass Rhizosphere	YKAGSLPMQNEELLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWAVTDSNTETAVDPESTIRLPQ*
Ga0105259_10081081	3300009597	Soil	VKTEELLSKLELIEEQARLTLDELPQHLGKERQRMIIALVKHIRWAVTDPNSQALSDPEATVRLPS*
Ga0105347_10142442	3300009609	Soil	MKTEELLSKLELIEEQARLSLDELPQHLGKERQRMIIALVKHIRWALTDPNSPALVDPEATVRLPS*
Ga0105340_100045416	3300009610	Soil	VETKELLSKLDLIEEQARLTLDAPPHLAKERQRMIIALVKHIRWAVKDPNSDELSDPEATVRLPS*
Ga0105252_100593642	3300009678	Soil	MKTEELLSKLELIEEQARLSLDELPQHLGKERQRMIIALVKHIRWALTDPNSPALIDPEATVRLPS*
Ga0105252_105220601	3300009678	Soil	MRLHAAFARLAGKSKTSGGRRVETKELLAKLDLIEEQARLTVDALPQVAKERQRMIIALVKQIRWALADGGPQPMDDPEATVRMPS*
Ga0134127_136081001	3300010399	Terrestrial Soil	ELLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWALADKSPETAVDPESTIRLPQ*
Ga0137348_10032754	3300011398	Soil	VETKELLSKLDLIEEQARLTLDAPPHLAKERQRMIIALVKHIRWALTDPNSPALIDPEATVRLPS*
Ga0137356_10043833	3300011402	Soil	VETKELLSKLDLIEEQARLTLDALPHLAKERQRMIVALVKQIRWAVKDPNSDELSDPEATVRLPS*
Ga0137356_10252263	3300011402	Soil	VQTGELLSKLDLIEEQARLTLDEYPQHLAKERQRMIIALVKHIRWGLADGAPQAPDPESTVRLPS*
Ga0137313_10086133	3300011403	Soil	LELIEEQARLSLDELPQHLGKERQRMIIALVKHIRWALTDPNSPALIDPEATVRLPS*
Ga0137323_10128613	3300011409	Soil	MKTEELLSKLELIEEQARLSLDELPQHLGKERQRMIIALVKHIRWALTDPNSPALVDPEA
Ga0137323_10199792	3300011409	Soil	MKTEELLSKLELIEEQARLSLDELPQHLGKERQRMIIALVKHIRCALTDPNSPALIDPEATVRLPS*
Ga0137422_10625221	3300011416	Soil	KTSGGRRVETKELLAKLDLIEEQARLTVDALPQVAKERQRMIIALVKQIRWALADGGPQPMDDPEATVRMPS*
Ga0137428_10149533	3300011432	Soil	VETKELLSKLDLIEEQARLTVEALPHLAKERQRMIVALVKQIRWALSDPNAQGLDDPESTVRLPS*
Ga0137426_11833221	3300011435	Soil	MKTEELLSKLELIEEQARLSLDELPQHLGKERQRMIIALVKQIRWSLTDSRAPAPPDPEATVSLPE
Ga0137429_11852441	3300011437	Soil	IEEQARLSLDELPQHLGKERQRMIIALVKHIRWALTDPNSPALVDPEATVRLPS*
Ga0137432_10682831	3300011439	Soil	MQTEELLSKLELIEEQARLTLDEYPQHLAQERQRMIIALVKHIRWALTDPNSPALVDPEATVR
Ga0137432_11036082	3300011439	Soil	MFIKPLLGSRAANINKLGAPMQNEELLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWAVTDNNPETAIDPESTVRLSS*
Ga0137421_10833162	3300012039	Soil	MQTEELLSKLDLIEEQARLTLDEFPQHLAKERQRMIIALVKHIRWGLADGAPQAPDPESTVRLPS*
Ga0137332_10118942	3300012122	Soil	VETKELLSKLDLIEEQARLTVEALPHLAKERQRMIVALVKQIRWALAEPNAQELVDPESTVRLPS*
Ga0137332_10479831	3300012122	Soil	MKTEELLSKLELIEEQARLSLDELPQHLGKERQRMIIALVKHICWALTDPNSPALVDPEATVRLPS*
Ga0137322_10192183	3300012146	Soil	MQTEELLSKLDLIEEQAKHTLEEFPQHLTKERQRMIIALVKHIRWALTDPNSPALIDPEATVRLPS*
Ga0137334_11414901	3300012179	Soil	VQLHIAFARLAGMKTEELLSKLELIEEQARLSLDELPQHLGKERQRMIIALVKHIRWALTDPNSPALVDPEATVRLPS*
Ga0137435_11567622	3300012232	Soil	MQKEELLSKLELIEEQARLTLDELPHLGKERQRMIIALVKHIRSAISDPNAQAFDDPEATVRLPS*
Ga0137394_103789502	3300012922	Vadose Zone Soil	VETEELLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWGFSDGTVGLDADPEATIALPEAFQKLSN*
Ga0075321_10355822	3300014300	Natural And Restored Wetlands	VESEELMSKLELIEEQARLTLEEFPRHLAKERQRLIISLSKHIRWLLAEADPEATLG
Ga0180068_10564562	3300014864	Soil	MQTEELLSKLDLIEEQAKHTLEEFPQHLTKERQRMIIALVKHIRWMVAEGAPPAGADPESTIPAAMIKRVA*
Ga0180090_10651731	3300014866	Soil	VKTEELLSKLELIEEQARLTLDELPQHLGKERQRMIIALVKHIRWALTDPNSPALIDPEATVRLPS*
Ga0180087_10615332	3300014872	Soil	VKTEELLSKLELIEEQARLTLDELPQHLGKERQRMIIALVKHIRWALTDPNSPALVDPEATVRLPS*
Ga0180084_10717932	3300014874	Soil	MQTEELLSKLDLIEEQAKHTLEEFPQHLTKERQRMIIALVKHIRWMVAEGEPPAGADPEATVPAAMIKRVA*
Ga0180064_11396291	3300014876	Soil	MQKEELLSKLELIEEQARLTLDAPPHLAKERQRMIIALVKHIRWAVKDPNSDELSDPEATVRLPS*
Ga0180094_11718462	3300014881	Soil	MQTEELLSKLDLIEEQARLTLDEFPQHLAKERQRMIIALVKHIRRGLADGAPQALDPEAT
Ga0180063_12383512	3300014885	Soil	MQTEELLSKLDLIEEQARLTLDEFPQHLAKERQRMIIALVKHIRWGLADGAPQAPDPEST
Ga0120098_10156212	3300015170	Fossill	VETEELLSKLDLIEEQARLTLDEFPQHLTKERQRMIIALVKHIRWAVTDSTPEELSDPEATVRLPS*
Ga0180067_10158672	3300015257	Soil	MQTEELLSKLDLIEEQAKHTLEEFPQHLTKERQRMIIALRKHIPWMVAEGAPPAGADPEATIPAAMIKRVA*
Ga0180085_10466963	3300015259	Soil	RHVETKELLSKLDLIEEQARLTLDALPHLAKERQRMIVALVKQIRWAVKDPNSDELSDPEATVRLPS*
Ga0184629_102916052	3300018084	Groundwater Sediment	VETKELLSKLDLIEEQARLTVEALPHLAKERQRMIVALVKQIRWALADSNAQGLDDPESTVRLPS
Ga0190265_100588983	3300018422	Soil	MEREELLSKLEMIEEQARLTLDEYPQHLTKERQRMIIALVKHLRWELADPNRAAAEDPESTVRLPS
Ga0190265_102003224	3300018422	Soil	VETKELMSKLDLIEEQARRTLDEPVQQRAKERQLMIIALVKHIRWAVTDATDPLSDPEATVRLPS
Ga0190265_104364812	3300018422	Soil	VQINELLSKLDLIEEQARRTMDESPQQRAKERQLMIIALVKHIRWALADTEPPALDDPEATVRLPS
Ga0190270_112818272	3300018469	Soil	METEDLLSKLDLIEEQARRTLEEFPQHLVAERQRVIISLARHIRWALAEASPKAAEDPEATVRSEDPEATVRQPS
Ga0190270_118938381	3300018469	Soil	RQVQINELLSKLDLIEEQARRTMDESPQQRAKERQLMIVALVKHIRWALADTEPPALDDPEATVRLPS
Ga0190270_121034811	3300018469	Soil	MQTEELLSKLDLIEEQAKHTLEEFPQHLAKERQRMIIALVKHIRWMVADATPPIGIDPEATVPAAIFKRVA
Ga0190270_122500071	3300018469	Soil	MQTEELLSKLELIEEQAKHTLEEFPQHLTKERQRMIIALVKHIRWMVADEQPAAGADPEATVPAIMKRVA
Ga0190270_124977961	3300018469	Soil	MERDELLSKLEMIEEQARLTLDEYPQHLTKERQRMIIALVKHLRWELADPNGPAVEDPESTVRLPS
Ga0190274_104670073	3300018476	Soil	MQTEELLSKLDLIEEQAKHTLEEFPQHLTKERQRMIIALVKHIRWMVADEQPAAGADPEATVPAIMKRVA
Ga0187894_101647601	3300019360	Microbial Mat On Rocks	MDREELLSKLELIEEQARLTLEEYPQHLVKERQRMIIALAKHVRWLVADATSQDPEATVEQSSGRKAA
Ga0190264_102819572	3300019377	Soil	VETKELLSKLDLIEEQARLTVEALPHLAKERQRMIVALVKQIRWALADTEPPALDDPEATVRLPS
Ga0187892_100021045	3300019458	Bio-Ooze	MDREELLSKLELIEEQARLTLEEYPQHLAKERQRMIIALAKHIRWLAADASPQDPEATVEQPLGKKAA
Ga0187893_100148026	3300019487	Microbial Mat On Rocks	MEREELLSKLELIEEQARLTLEEFPQHLAKERQRMIIALAKHIRRLVADENPQDPEATVEQPLGKKAA
Ga0193717_10147284	3300020060	Soil	VETKELLSKLDLIEEQARLTVEALPHLAKERQRMIVALVKQIRWALDDSNGQGILDPEATLRLPS
Ga0180118_12113892	3300020063	Groundwater Sediment	VQTGELLSKLDLIEEQARLTLDEYPQHLAKERQRMIIALVKHIRWGLADGAPQAPDPESTVRLPS
Ga0180109_10241782	3300020067	Groundwater Sediment	MQTEELLSKLDLIEEQARLTLDEFPQHLAKERQRMIIALVKHIRWGLADGAPQAPDPESTVRLPS
Ga0196972_10526012	3300020131	Soil	METKDILSKLDLIEEQARLTIDALPQLAKERQRMIVALVKQIRWQLTDGELEALADPEATIRLTS
Ga0196977_11221502	3300020146	Soil	METKEILSKLDLIEEQARLTIDALPQLAKERQRMIVALVKQIRWQLNEGELEALADPEATIRLTS
Ga0196964_100499395	3300020202	Soil	MKELLSKLDLIEEQARLTVDSLPHLARERQRMIIALVKQLRWAIAEPGSETAADPEATIRLTS
Ga0196964_100817843	3300020202	Soil	MKELVSKLDLIEEQARLTVDSLPHLARERQRMIIALVKQIRWAIAEPGTETAADPEATIRLTS
Ga0196964_102200822	3300020202	Soil	MELKELLSKLDLIEEHARHTLDEFPRHLTKERQRMIIALVHQIRVGCDPEATVRIPVQTQ
Ga0196964_105660521	3300020202	Soil	ELMSKLDLIEEQARLTVEALPHLAKERQRMIIALVKQIRWAVTEPNAGAAADPEATIRLT
Ga0196963_101401532	3300020215	Soil	MKELVSKLDLIEEQARLTVDSLPHLARERQRMIIALVKQLRWAIAEPGSETAADPEATIRLT
Ga0196963_102262792	3300020215	Soil	VETKELLSKLDLIEEQARLTVEALPHLAKERQRMIIALAKQIRWALSEPNAESGVDPEATIRLPS
Ga0212128_100321502	3300022563	Thermal Springs	VETEELLSKLDLIEEQARLTLDEFPQHLTKERQRMIIALVKHIRWAIADSGPDAADDPEATVRLPS
Ga0212128_102128752	3300022563	Thermal Springs	VETQELLSKLDLIEEQARLTLDEFPQHLAKERQRMIIALVKHIRWAIADSGPDATDDPEATVRLPS
Ga0207707_111727082	3300025912	Corn Rhizosphere	VDTEELLSKLELIEEQARLTLDEFPRHLTKERQRMIISLAKNIRWLLSEAGAPDPEATLRMPIDRRLS
Ga0207707_113919961	3300025912	Corn Rhizosphere	MEAKKQEREELLAKLDLIEEQARLTLEEFPQEMKKERQRMIIALVKHIRWAATDPQVSLAIDPEETVKLRVS
Ga0207707_113919962	3300025912	Corn Rhizosphere	VETEELLSKLELIEEQARLTLDEFPKHLTKERQRMIISLAKNIRWMVNETANPEATIRMIDRRLS
Ga0209731_10142771	3300027326	Forest Soil	VQTSELLSKLDLIEEQARRTMDEATQQRAKERQLMIIALVKHIRWALADTEPPALDDPEATIRLIS
Ga0209967_10286152	3300027364	Arabidopsis Thaliana Rhizosphere	MLAQELLSKLDLIEEQARLTLDALPHLAKERQRLIMALVKQLRWELTEGAPTLNDPESTVRLPS
Ga0209996_10131003	3300027395	Arabidopsis Thaliana Rhizosphere	KLDLIEEQARLTLDALPHLAKERQRLIMALVKQLRWELTEGAPTLNDPESTVRLPS
Ga0208685_10630332	3300027513	Soil	MKTEELLSKLELIEEQARLSLDELPQHLGKERQRMIIALVKHIRWALTDPNSPALIDPEATVRLPS
Ga0208185_100027926	3300027533	Soil	VETKELLSKLDLIEEQARLTLDAPPHLAKERQRMIIALVKHIRWAVKDPNSDELSDPEATVRLPS
Ga0209387_10508992	3300027639	Agricultural Soil	LVRSPRTYNKLESKVDREELLSKLDLIEEQARLTLEDYPQHLTKERQRMIIALAKHIRWSLADPAVGDDPEATVRMPS
Ga0209387_11506071	3300027639	Agricultural Soil	RGQKQAEPQVERDELLSKLELIEEQARLTLNEFPQHLAKERQRMIIALIKHIRWAISDTPGAADDPETTVRLPL
Ga0209387_11897792	3300027639	Agricultural Soil	LLASPAAFITSWELHLDTKELLTKLDLIEEQARLTVDALPYLAKERQRMIIALVKQIRWALSDSSGDAAPDPEATVRLPS
Ga0209387_12335882	3300027639	Agricultural Soil	MQNEEMLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWAMTDKNPEAAVDPESTVRLPS
Ga0209588_10668674	3300027671	Vadose Zone Soil	GSLRVHNKLESPVERDELLSKLDLIEEQARLTLDEYPQHLTKERQRMIIALVKHIRWGFSDRTDGLDADPEATIALPEPFQKLSS
Ga0209011_11432731	3300027678	Forest Soil	MELEELLSKLDLIEEQARLTHDEYPKHLTKERQRMIIALVKHIRWEVLDSGQPVDEDATVALPGVQLQN
Ga0209486_100889842	3300027886	Agricultural Soil	MFVQRKELLEKLDLIEEQARLTVDALPHLAKERQRLIIALIKQIRWSLAEPAPESFDDPEDTIRLPS
Ga0209382_101827383	3300027909	Populus Rhizosphere	METEDLLSKLDLIEEQARRTLEEFPQHLVAERQRVIISLARHVRWALAGASPRAVEDPEATVHSDDPEATVRQPS
Ga0209382_102985213	3300027909	Populus Rhizosphere	MPRVHVHNDELLSKLDLIEEQARRTMDEITYQRPKERQLMIIALVKHIRWAATDSTPVERIDPEATVRLSS
Ga0247824_103750932	3300028809	Soil	MQTKELLSKLDLIEEQARLTLDALPHLAKERQRLIMALVKQLRWELTEGAPTLNDPEST
Ga0268241_100772472	3300030511	Soil	VQSEELLSKLELIEEQARLTLDEHPRHLTKERQRMIISLAKHIRWLLNDTSEAVLRLPADRRLS
Ga0307408_1001483702	3300031548	Rhizosphere	MQREELLSKLEMIEEQARLTLDEYPQHLTKERQRMIIALVKHLRWELADANRAAVEDPESTVRLPS
Ga0307408_1006155852	3300031548	Rhizosphere	LETNKQEREELLAKLDLIEEQARLTLEEFPQEMKKERQRMIIALVKHIRWAATDPQVSMAIDPEETVKLRVS
Ga0307406_119094262	3300031901	Rhizosphere	MIEEQARLTLDEYPQHLTKERQRMIIALVKHLRWELADANRAAVEDPESTVRLPS
Ga0307407_106883011	3300031903	Rhizosphere	MEIKEILSKLDLIEEQARLTIDALPQLAKERQRMIVALVKQIRWQLTDGELEALADPEATVRLSS
Ga0315910_100162848	3300032144	Soil	MERDELLSKLEMIEEQARLTLDEYPQHLTKERQRMIIALVKHLRWELSDANRAAVEDPESTVRLPS
Ga0315910_105786372	3300032144	Soil	MERDELLSKLEMIEEQARLTLDEYPQHLTKERQRMIIALVKHLRWELAEPDRATAEDPESTVRLPS
Ga0310810_100026246	3300033412	Soil	VDTEELLSKLELIEEQARLTLDEFPRHLTKERQRMIISLAKNIRWLLAETASPEATIRMIDRRLS
Ga0310810_100026247	3300033412	Soil	VELQEQAELLAKLDLIEEQARLTLDEFPRELRKERQRMIISLVKHIRAAATDPRVSLAIDPEETVNLSAS
Ga0214471_100280574	3300033417	Soil	MQTEELLSKLDLIEEQARLTLDEFPQHLAKERQRMIIALVKHMRWAITDTPPQALDDPEADPEATVRLPS
Ga0214471_105779192	3300033417	Soil	MKELLVKLDLIEEQARLALNEPSDHLANERQRMIIALVKQIRWGLTDSAPPALDDPEATVRLPS
Ga0316624_100857864	3300033486	Soil	VESEELLSKLELIEEQARLTLEEFPRHLTRERQRVIISLAKNIRWLLSESMDAEATIPAPVDRRLS
Ga0247829_101610604	3300033550	Soil	MERDELLSKLEMIEEQARLTLDEYPQHLTKERQRMIIALVKHLRWEIADANRGAVEDPESTVRLPS
Ga0364925_0063509_990_1190	3300034147	Sediment	VKTEELLSKLELIEEQARLTLDELPQHLGKERQRMIIALVKHIRWAVTDPNSQALSDPEATVRLPS
Ga0364935_0062008_151_351	3300034151	Sediment	MKTEELLSKLELIEEQARLSLDELPQHLGKERQRMIIALVKHIRWAVTDPNSQALSDPEATVRLPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050220

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences