Metagenome / Metatranscriptome Family F050199

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050199
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	66 residues
Representative Sequence	MPWVRLSTWSDMRARNERVEALLEQWDSDVAAARSDPCKFSSVFEVLGTCAGELHEALDGGCDDED
Number of Associated Samples	117
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	86.90 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.276 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.552 % of family members)
Environment Ontology (ENVO)	Unclassified (34.483 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.828 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.38% β-sheet: 0.00% Coil/Unstructured: 43.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00583	Acetyltransf_1	4.14
PF00589	Phage_integrase	2.07
PF00248	Aldo_ket_red	2.07
PF01370	Epimerase	2.07
PF00561	Abhydrolase_1	2.07
PF04101	Glyco_tran_28_C	1.38
PF01569	PAP2	1.38
PF07690	MFS_1	1.38
PF06803	DUF1232	0.69
PF04185	Phosphoesterase	0.69
PF02518	HATPase_c	0.69
PF01872	RibD_C	0.69
PF02517	Rce1-like	0.69
PF00872	Transposase_mut	0.69
PF03860	DUF326	0.69
PF03649	UPF0014	0.69
PF01979	Amidohydro_1	0.69
PF02909	TetR_C_1	0.69
PF13088	BNR_2	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.69
COG0390	ABC-type iron transport system FetAB, permease component	Inorganic ion transport and metabolism [P]	0.69
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.69
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.69
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.69
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	0.69
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.69
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
All Organisms	root	All Organisms	31.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
cellular organisms	root	All Organisms → cellular organisms	31.03 %
Viruses	superkingdom	All Organisms → Viruses	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22.07 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.62 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	7.59 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.45 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.38 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Actinopolysporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	4.14 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.38 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1.38 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.38 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.38 %
Actinopolysporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae	0.69 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	2.76 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	1.38 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.38 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.38 %
Microcella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella	0.69 %
Citricoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Citricoccus	0.69 %
Actinopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora	0.69 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
Microlunatus sagamiharensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus sagamiharensis	2.07 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.38 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.38 %
Actinopolyspora mzabensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	0.69 %
unclassified Citricoccus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Citricoccus → unclassified Citricoccus	0.69 %
Friedmanniella luteola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	0.69 %
Microcella alkaliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella → Microcella alkaliphila	0.69 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.28 %
Microlunatus sagamiharensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus sagamiharensis	2.07 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.38 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.38 %
Citricoccus sp. SGAir0253	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Citricoccus → unclassified Citricoccus → Citricoccus sp. SGAir0253	0.69 %
Arthrobacter sp. Hiyo8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. Hiyo8	0.69 %
Actinopolyspora mzabensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	0.69 %
Friedmanniella luteola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	0.69 %
Microcella alkaliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella → Microcella alkaliphila	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0502187	Not Available	531	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105382464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1019	Open in IMG/M
3300000559\|F14TC_104914752	Not Available	623	Open in IMG/M
3300000787\|JGI11643J11755_11479212	Not Available	544	Open in IMG/M
3300000956\|JGI10216J12902_106667659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2069	Open in IMG/M
3300000956\|JGI10216J12902_121294242	Not Available	924	Open in IMG/M
3300002568\|C688J35102_119888833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus sagamiharensis	804	Open in IMG/M
3300002899\|JGIcombinedJ43975_10049531	Not Available	708	Open in IMG/M
3300004114\|Ga0062593_100912297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella → Microcella alkaliphila	889	Open in IMG/M
3300004156\|Ga0062589_100281415	Not Available	1271	Open in IMG/M
3300004157\|Ga0062590_100768258	Not Available	880	Open in IMG/M
3300004463\|Ga0063356_102879020	Not Available	741	Open in IMG/M
3300004479\|Ga0062595_100079289	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300004479\|Ga0062595_100832657	Not Available	766	Open in IMG/M
3300004479\|Ga0062595_102593657	Not Available	508	Open in IMG/M
3300005168\|Ga0066809_10063075	Not Available	851	Open in IMG/M
3300005169\|Ga0066810_10055268	Not Available	787	Open in IMG/M
3300005334\|Ga0068869_100482979	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1032	Open in IMG/M
3300005347\|Ga0070668_100500744	Not Available	1051	Open in IMG/M
3300005354\|Ga0070675_102127336	Not Available	517	Open in IMG/M
3300005366\|Ga0070659_101453882	Not Available	610	Open in IMG/M
3300005441\|Ga0070700_100965547	Not Available	698	Open in IMG/M
3300005441\|Ga0070700_100999741	Not Available	687	Open in IMG/M
3300005459\|Ga0068867_100409602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1146	Open in IMG/M
3300005615\|Ga0070702_100729256	Not Available	759	Open in IMG/M
3300005616\|Ga0068852_101440775	Not Available	711	Open in IMG/M
3300005937\|Ga0081455_10199670	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300006058\|Ga0075432_10006315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	4029	Open in IMG/M
3300006853\|Ga0075420_101108910	Not Available	680	Open in IMG/M
3300006881\|Ga0068865_100818357	Not Available	805	Open in IMG/M
3300007076\|Ga0075435_100029847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4283	Open in IMG/M
3300009098\|Ga0105245_11109906	Not Available	837	Open in IMG/M
3300009098\|Ga0105245_12318645	Not Available	590	Open in IMG/M
3300009147\|Ga0114129_12755508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. Hiyo8	585	Open in IMG/M
3300009176\|Ga0105242_10132257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2155	Open in IMG/M
3300009553\|Ga0105249_13322703	Not Available	517	Open in IMG/M
3300010042\|Ga0126314_10065845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2395	Open in IMG/M
3300010147\|Ga0126319_1202136	Not Available	1335	Open in IMG/M
3300010154\|Ga0127503_10603153	Not Available	624	Open in IMG/M
3300010371\|Ga0134125_12653567	Not Available	545	Open in IMG/M
3300010375\|Ga0105239_11197699	Not Available	875	Open in IMG/M
3300012212\|Ga0150985_111351488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	1188	Open in IMG/M
3300012212\|Ga0150985_118883273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	2067	Open in IMG/M
3300012491\|Ga0157329_1029860	Not Available	561	Open in IMG/M
3300012508\|Ga0157315_1023576	Not Available	670	Open in IMG/M
3300012915\|Ga0157302_10102121	Not Available	906	Open in IMG/M
3300012955\|Ga0164298_10067467	Not Available	1785	Open in IMG/M
3300012958\|Ga0164299_10012169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3256	Open in IMG/M
3300012958\|Ga0164299_10097997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1516	Open in IMG/M
3300012960\|Ga0164301_10798990	Not Available	721	Open in IMG/M
3300012961\|Ga0164302_11384175	Not Available	573	Open in IMG/M
3300012989\|Ga0164305_11405109	Not Available	615	Open in IMG/M
3300013096\|Ga0157307_1134578	Not Available	560	Open in IMG/M
3300013297\|Ga0157378_12792721	Not Available	541	Open in IMG/M
3300013306\|Ga0163162_10033566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5101	Open in IMG/M
3300013306\|Ga0163162_12550708	Not Available	588	Open in IMG/M
3300013307\|Ga0157372_10852357	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300013307\|Ga0157372_11617943	Not Available	746	Open in IMG/M
3300013307\|Ga0157372_12117602	Not Available	646	Open in IMG/M
3300013307\|Ga0157372_12389764	Not Available	607	Open in IMG/M
3300015077\|Ga0173483_10261652	Not Available	829	Open in IMG/M
3300015371\|Ga0132258_10090846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	7161	Open in IMG/M
3300015371\|Ga0132258_12368007	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300015371\|Ga0132258_12655650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1250	Open in IMG/M
3300015372\|Ga0132256_100570957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus sagamiharensis	1245	Open in IMG/M
3300015372\|Ga0132256_102969650	Not Available	570	Open in IMG/M
3300015373\|Ga0132257_100979504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus sagamiharensis	1063	Open in IMG/M
3300015373\|Ga0132257_104033584	Not Available	534	Open in IMG/M
3300017792\|Ga0163161_10981487	Not Available	720	Open in IMG/M
3300017792\|Ga0163161_11403585	Not Available	610	Open in IMG/M
3300017792\|Ga0163161_11450275	Not Available	601	Open in IMG/M
3300018000\|Ga0184604_10085492	Not Available	951	Open in IMG/M
3300018051\|Ga0184620_10238434	Not Available	609	Open in IMG/M
3300018066\|Ga0184617_1033107	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300018073\|Ga0184624_10102084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1228	Open in IMG/M
3300018074\|Ga0184640_10304993	Not Available	723	Open in IMG/M
3300019361\|Ga0173482_10621737	Not Available	546	Open in IMG/M
3300019867\|Ga0193704_1098983	Not Available	512	Open in IMG/M
3300020005\|Ga0193697_1047135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1073	Open in IMG/M
3300020069\|Ga0197907_11442746	Not Available	625	Open in IMG/M
3300020082\|Ga0206353_10421811	Not Available	634	Open in IMG/M
3300021078\|Ga0210381_10098596	Not Available	946	Open in IMG/M
3300021078\|Ga0210381_10197237	Not Available	701	Open in IMG/M
3300021968\|Ga0193698_1045468	Not Available	570	Open in IMG/M
3300022756\|Ga0222622_10017577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3572	Open in IMG/M
3300022756\|Ga0222622_10596195	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300022756\|Ga0222622_10913897	Not Available	644	Open in IMG/M
3300023261\|Ga0247796_1014976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	1154	Open in IMG/M
3300025899\|Ga0207642_10746704	Not Available	619	Open in IMG/M
3300025901\|Ga0207688_10211132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Citricoccus → unclassified Citricoccus → Citricoccus sp. SGAir0253	1166	Open in IMG/M
3300025927\|Ga0207687_10202631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1552	Open in IMG/M
3300025935\|Ga0207709_10596402	Not Available	874	Open in IMG/M
3300025935\|Ga0207709_11238283	Not Available	616	Open in IMG/M
3300025961\|Ga0207712_11633996	Not Available	577	Open in IMG/M
3300025972\|Ga0207668_10910640	Not Available	783	Open in IMG/M
3300026075\|Ga0207708_10619264	All Organisms → cellular organisms → Bacteria → Terrabacteria group	918	Open in IMG/M
3300026089\|Ga0207648_10122626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2285	Open in IMG/M
3300026089\|Ga0207648_11633270	Not Available	606	Open in IMG/M
3300026118\|Ga0207675_100012788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	7841	Open in IMG/M
3300027523\|Ga0208890_1033274	Not Available	782	Open in IMG/M
3300027907\|Ga0207428_10001293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26675	Open in IMG/M
3300028587\|Ga0247828_11190709	Not Available	510	Open in IMG/M
3300028708\|Ga0307295_10117477	Not Available	725	Open in IMG/M
3300028709\|Ga0307279_10019139	Not Available	926	Open in IMG/M
3300028710\|Ga0307322_10048608	Not Available	1032	Open in IMG/M
3300028711\|Ga0307293_10101891	Not Available	911	Open in IMG/M
3300028712\|Ga0307285_10027835	Not Available	1336	Open in IMG/M
3300028712\|Ga0307285_10086947	All Organisms → cellular organisms → Bacteria → Terrabacteria group	815	Open in IMG/M
3300028713\|Ga0307303_10011022	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300028718\|Ga0307307_10150927	Not Available	725	Open in IMG/M
3300028721\|Ga0307315_10206949	Not Available	609	Open in IMG/M
3300028722\|Ga0307319_10333455	Not Available	503	Open in IMG/M
3300028744\|Ga0307318_10012073	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300028754\|Ga0307297_10014860	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300028755\|Ga0307316_10052509	Not Available	1371	Open in IMG/M
3300028768\|Ga0307280_10119330	Not Available	891	Open in IMG/M
3300028778\|Ga0307288_10036859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1641	Open in IMG/M
3300028784\|Ga0307282_10103121	Not Available	1325	Open in IMG/M
3300028784\|Ga0307282_10147242	Not Available	1114	Open in IMG/M
3300028787\|Ga0307323_10088520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300028787\|Ga0307323_10248387	Not Available	641	Open in IMG/M
3300028790\|Ga0307283_10205134	Not Available	565	Open in IMG/M
3300028796\|Ga0307287_10342212	Not Available	564	Open in IMG/M
3300028799\|Ga0307284_10383674	Not Available	571	Open in IMG/M
3300028810\|Ga0307294_10095895	Not Available	933	Open in IMG/M
3300028810\|Ga0307294_10219841	Not Available	663	Open in IMG/M
3300028811\|Ga0307292_10019465	Not Available	2381	Open in IMG/M
3300028814\|Ga0307302_10646830	Not Available	526	Open in IMG/M
3300028819\|Ga0307296_10032139	Not Available	2768	Open in IMG/M
3300028828\|Ga0307312_10407918	Not Available	893	Open in IMG/M
3300028875\|Ga0307289_10048278	Not Available	1699	Open in IMG/M
3300028876\|Ga0307286_10368799	Not Available	536	Open in IMG/M
3300028881\|Ga0307277_10067317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1482	Open in IMG/M
3300028881\|Ga0307277_10554344	Not Available	516	Open in IMG/M
3300030905\|Ga0308200_1024319	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300030905\|Ga0308200_1083684	Not Available	655	Open in IMG/M
3300031091\|Ga0308201_10042402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1100	Open in IMG/M
3300031093\|Ga0308197_10039449	Not Available	1162	Open in IMG/M
3300031184\|Ga0307499_10068268	Not Available	912	Open in IMG/M
3300031421\|Ga0308194_10356286	Not Available	522	Open in IMG/M
3300033550\|Ga0247829_11144644	Not Available	645	Open in IMG/M
3300033551\|Ga0247830_10074482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2316	Open in IMG/M
3300034447\|Ga0370544_19213	Not Available	551	Open in IMG/M
3300034681\|Ga0370546_033571	Not Available	739	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.83%
Host-Associated	Host-Associated	35.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.55%
Plants	Host-Associated → Plants	35.17%
Aquatic	Environmental → Aquatic	8.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.93%
Sediment	Environmental → Aquatic → Sediment	5.52%
Freshwater	Environmental → Aquatic → Freshwater	2.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.83%
Loam	Environmental → Terrestrial → Soil → Loam	4.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.07%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.38%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.38%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_05021872	3300000033	Soil	MPWVRLSTWSDMRARNERVEALLEQWDSDVAAARSDPCKFSSAFEVLGTCAAEVREALDGGCDDED*
INPhiseqgaiiFebDRAFT_1053824642	3300000364	Soil	MPWVRLSTWSDMRARNERVEALLEQWDSDVAAARSDPCKFSSVFEVLGTCAGELHEALDGGCDDED*
F14TC_1049147521	3300000559	Soil	MPRVRLATWSDMRAREERVAALLEQWDSDVAAARSDPCKFSSAFEVLGTCAGELHEALDGRCDDED*
JGI11643J11755_114792122	3300000787	Soil	MPWVXLXTWXDMRARXERVXALLEQWDSDVAAARSDPCKFSSAFDVLGTCAAEVREALDGGCDDED*
JGI10216J12902_1066676592	3300000956	Soil	MPWVRLSKWRDIRAREARVEALLEQWDSDVSAARSAPSESWSEFEVLATCAGELHEALDGRCAEDWADLD*
JGI10216J12902_1212942422	3300000956	Soil	MPWVRLSKWRGIHAREERVEALLKQWDSDVSAARNAPRTFLSAFEVLATCAGELHEALDGRSDDDWADLD*
C688J35102_1198888331	3300002568	Soil	MPWVRLSKWRDIRAREARVEALLEQWDSDVSAARSGPCEFWSEFEVLATCAGELHEALDGRCAEDWADLD*
JGIcombinedJ43975_100495311	3300002899	Soil	MPWVRLATWSDMRAREERVAALLEQWDSDVAAARSDPCKFSSAFEVLGTCAAEVREALDGGCDDED*
Ga0062593_1009122972	3300004114	Soil	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARNDPWKFSSAFEVLGTCAGELHEALDEGCDDKD*
Ga0062589_1002814152	3300004156	Soil	MPWVRLSTWRDIRAREERVRTLLEQWDSDVSAARSDPGKFSSAFEVLGTCAGELHEALDGGCDDD*
Ga0062590_1007682581	3300004157	Soil	MPWVRLSTWRDIRAREERVRTLLEQWDSDVSAARSDPGKFSSAFEVLGTCAGELHEAL
Ga0063356_1028790202	3300004463	Arabidopsis Thaliana Rhizosphere	MPWVRLSTWRDMRAREERIEALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED*
Ga0062595_1000792893	3300004479	Soil	MPWVRLATWSDMRAREERVAALLEQWDSDVAAARSDPCKFSSAFEVLSTCAAEVREALDMGLR*
Ga0062595_1008326572	3300004479	Soil	MPWGRLSKWRDVCAREERVEALLQQWDSDVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY*
Ga0062595_1025936571	3300004479	Soil	MPWVRLSTWRDVCAREERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY*
Ga0066809_100630752	3300005168	Soil	MPWVRLSKWRDMRAREERVEALLEQWDSDVSAARSDPGTFSRAFEVLGTCADDLREAMDGVCDDNDDYY*
Ga0066810_100552682	3300005169	Soil	MPWVRLSKWREVRAREERVEALLEQWDSDVSAARSDPGTFSRAFEVLGTCADDLREAMDGVCDDNDDYY*
Ga0068869_1004829791	3300005334	Miscanthus Rhizosphere	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDSCKFSGAFEVLGTCAGELHEALDG
Ga0070668_1005007442	3300005347	Switchgrass Rhizosphere	MPWVRLSKWRDVCAREERVEALLQQWDSDVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY*
Ga0070675_1021273361	3300005354	Miscanthus Rhizosphere	MPWMRLARWRDMCAREERVQGLLERWDSDVSAARSDPGTFSRAFEVLGTCADELREALDG
Ga0070659_1014538822	3300005366	Corn Rhizosphere	MRAREERVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED*
Ga0070700_1009655471	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPWVRLSTWRDMRARDERVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED*
Ga0070700_1009997412	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPWVRLSKWRDVCAREERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY*
Ga0068867_1004096021	3300005459	Miscanthus Rhizosphere	MPWVRLSTWRDMRAREVRVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED*
Ga0070702_1007292562	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPWVRLSTWRNMRAREVRVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED*
Ga0068852_1014407751	3300005616	Corn Rhizosphere	FVLRFFTACLSDASRRTLGGSMPWVRLSTWRDVCAREERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY*
Ga0081455_101996703	3300005937	Tabebuia Heterophylla Rhizosphere	MPWVRLSEWRDIRAREERVEALLEQWDLNVSAARSDPRRFSSEFEVLGNCAAELHGALDGCSDDDWSDLD*
Ga0075432_100063158	3300006058	Populus Rhizosphere	MPWVRLSKWKDIRAREERVEALLEQWDTDVSAARNDPCRFSSAFEVLGTCAGELHEAVDGRSDDDWADLD*
Ga0075420_1011089101	3300006853	Populus Rhizosphere	MPWVRLSTWRDVCAREERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADE
Ga0068865_1008183571	3300006881	Miscanthus Rhizosphere	MPWVRLSTWRNMRAREVRVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCA
Ga0075419_100501923	3300006969	Populus Rhizosphere	VRIFVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY*
Ga0075435_1000298478	3300007076	Populus Rhizosphere	ARRKLGGSMPWVRLSKWKDIRAREERVEALLEQWDTDVSAARNDPCRFSSAFEVLGTCAGELHEAVDGRSDDDWADLD*
Ga0105245_111099061	3300009098	Miscanthus Rhizosphere	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED*
Ga0105245_123186452	3300009098	Miscanthus Rhizosphere	AGERWEEAGRKLGGSMPWVRLSTWRDMRAREERVEALLEQWDSNIAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED*
Ga0114129_127555082	3300009147	Populus Rhizosphere	EERVEALLEQWDTDVSAARNDPCRFSSAFEVLGTCAGELHEAVDGRSDDDWADLD*
Ga0105242_101322571	3300009176	Miscanthus Rhizosphere	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDSCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED*
Ga0105249_133227031	3300009553	Switchgrass Rhizosphere	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEAL
Ga0126314_100658452	3300010042	Serpentine Soil	MPLVRLSTWRDMRAREARVEALLEQWDSDVAAARSERCKFSSALEMLGTCAGELHEALDGGCDDQD*
Ga0126319_12021362	3300010147	Soil	AREERVEALLERWDSDVSAARSDPGTFSRAFEVLGTCAGELREALDGVCDDDDDYF*
Ga0127503_106031531	3300010154	Soil	MRAREERVEALLEQWDSNVAAARSDTRKFSSAFEVLGTCAGELHEALDGDCDEDCDDED*
Ga0134125_126535671	3300010371	Terrestrial Soil	MRAREVRVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED*
Ga0105239_111976991	3300010375	Corn Rhizosphere	MPWVRLSTWRDVCAREERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADELHEAVD
Ga0150985_1113514882	3300012212	Avena Fatua Rhizosphere	MPWVRLSKWRGIRAREERVEALLRQWDSDVSAARNDPCRFSSAFEALATCEGELHEALYGRSDDDWADLD*
Ga0150985_1188832732	3300012212	Avena Fatua Rhizosphere	MPWVRLSKWRDIRAREARVEALVEQWDSDVSAARSGPCEFWSEFEVLATCAGELHEALDGRCAEDWADLD*
Ga0157329_10298601	3300012491	Arabidopsis Rhizosphere	MPWVRLSKWRDIRAREERVEALLEQWDLNVSAARSDPCKFSSGFEVLGTCAAELHGALDGRSDDDWADL
Ga0157315_10235761	3300012508	Arabidopsis Rhizosphere	MPWVRLSKWRDIRAREERVEALLEQWDLNVSAARSDPCKFSSGFEVLGTCAAELHGALDGRSDDDWADLD*
Ga0157302_101021211	3300012915	Soil	MRAREERVEALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED*
Ga0164298_100674672	3300012955	Soil	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED*
Ga0164299_100121692	3300012958	Soil	MRAREVRVEALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED*
Ga0164299_100979971	3300012958	Soil	TWRDVRAREERVEELLEQWDSHVSAARSDPGKFSSAFEVLGMCADELHDALDGVCDDDYY
Ga0164301_107989901	3300012960	Soil	MPWVRLSTWRDLRAREERVEALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEAL
Ga0164302_113841751	3300012961	Soil	MPWVRYSTWRDVRAREERVEELLEQWDSHVSAARSDPGKFSSAFEVLGMCADELHDALDGVCDDDYY*
Ga0164305_114051091	3300012989	Soil	MRLSRWRDMCAREERVQGLLERWDSDVSAARSDPGTFSRAFEVLGTCADDLREAMDGVCDDDYF*
Ga0157307_11345781	3300013096	Soil	MPWVRLSKWRDICAREERVEALLRQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED*
Ga0157378_127927211	3300013297	Miscanthus Rhizosphere	MPGVRLSKWRDVCAREERVEALLQQWDSDVSAARSDPGKFSSAFEVLGTCADELHEAV
Ga0163162_100335661	3300013306	Switchgrass Rhizosphere	GCMPWVRLSKWRDVCAREERVEALLQQWDSDVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY*
Ga0163162_125507081	3300013306	Switchgrass Rhizosphere	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDSCKFSSAFEVLGTCAGELHEA
Ga0157372_108523572	3300013307	Corn Rhizosphere	MRLARWRDMCAREERVQGLLERWDSDVSAARSDPGTFSRAFEVLGTCADELREALDGVCDDDDDYF*
Ga0157372_116179431	3300013307	Corn Rhizosphere	MPWVRLSTWRDMRARDERVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCDEDCDDED*
Ga0157372_121176021	3300013307	Corn Rhizosphere	MPWVRLSKWRDVCAREERVEALLQQWDSDVSAARSDPGKVSSAFEVLGTCADELHEGVDGVCDDDYY*
Ga0157372_123897642	3300013307	Corn Rhizosphere	MPWMRLSTWRDIRAREERVEALLRQWDSDVSAARNDPCRFSSAFEALATCEGELHEALYGRSDDDWADPD*
Ga0173483_102616523	3300015077	Soil	MPWVRLSKWRDIRAREERVEALLKQWDSDVSAARNDPCSFSSAFEVVATCAGELHEALVGRSDDDWADL
Ga0132258_100908466	3300015371	Arabidopsis Rhizosphere	MRAREERVEALLEEWDSDVAAARSDPGKFSSEFEVLGTCAGELHDALDGGGDDED*
Ga0132258_123680072	3300015371	Arabidopsis Rhizosphere	VRLSKWRDIRAREERVEALLEQWDSDVSAARSDPYRFSGAFEVLGTCAGELHEALDGRSDDDWADLD*
Ga0132258_126556501	3300015371	Arabidopsis Rhizosphere	MPWVRLSKWRDIRVREERVDALLKQWDSDVSAARNDPRSFTSAFEVVATCAGELHEALDGHSDDDWADLD*
Ga0132256_1005709571	3300015372	Arabidopsis Rhizosphere	MPWVRLSKWRDIRVREERVEALLKQWDSDVSAARNDPRSFTSAFEVVATCAGELHEALDGRSDDDWADMD*
Ga0132256_1029696502	3300015372	Arabidopsis Rhizosphere	LSKWKDIRAREERVGALLEQWDTDVSAARNDPCRFSSAFEVLGTCAGELHEAVDGRSDDDWADLD*
Ga0132257_1009795042	3300015373	Arabidopsis Rhizosphere	MPGVRLSKWRDIRAREERVEALLEQWDSDVSAARSDPYRFSGAFEVLGTCAGELHEALDGRFDDDWADLD*
Ga0132257_1040335842	3300015373	Arabidopsis Rhizosphere	WVRLSTLRDMRAREERVEALLEEWDSDIAAARSDPCKFSSAFDVLGTCAGELHDALDGVGDDED*
Ga0163161_109814872	3300017792	Switchgrass Rhizosphere	MPWVRLSTWRDVCAREERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY
Ga0163161_114035851	3300017792	Switchgrass Rhizosphere	MPWVRLSTWRNMRAREVRVEALLEQWDSNVAAARGDPCKFSSAFEVLGTCAGELHEALDGDCDE
Ga0163161_114502751	3300017792	Switchgrass Rhizosphere	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDSCKFSGAFEVLGTCAGELHEALDGDCDEDCDDED
Ga0184604_100854922	3300018000	Groundwater Sediment	MPWVRLATWSDMRAREERVKALLEQWDSDVAAARSDPCKFSSAFDVLGTCAAEVREALNEGGDDED
Ga0184620_102384341	3300018051	Groundwater Sediment	MPWVRLSTWSDMRARLERVEALLEQWDSDVAAARSDPCKFSSAFEVVGTCAGELYEALDGGGDDAN
Ga0184617_10331072	3300018066	Groundwater Sediment	MPWVRLPTWSDMRAREERVKALLEQWDSDVAAARSDPCKFSSAFDVLGTCAAEVREALNEGGDDED
Ga0184624_101020842	3300018073	Groundwater Sediment	RAREERVDALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED
Ga0184640_103049931	3300018074	Groundwater Sediment	MRAREERVDALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED
Ga0173482_106217371	3300019361	Soil	MPWVRLSTWRDIRAREERVRTLLEQWDSDVSAARSDPGKFSSAFEVLGTCAGELHEALDGGCDDD
Ga0193704_10989831	3300019867	Soil	MPWVRLSTWRDMRAREERVDALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED
Ga0193697_10471352	3300020005	Soil	MPWVRHSTWRHVRAREERVEELLEQWDSRVSAARSDPGKFSSAFEVLGMCADELHDALDEVCDDDYY
Ga0197907_114427463	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	GSMPWVRLSTWRDVCAREERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY
Ga0206353_104218111	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	SMPWVRLSTWRDVCASEERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY
Ga0210381_100985961	3300021078	Groundwater Sediment	MRAREERVEALLERWDSDVSAARSDPGTFLRAFEVLGTCADELHQALD
Ga0210381_101972371	3300021078	Groundwater Sediment	TLGGTMPWVRLSTWTEMRAREQRLEALLEQWDSDVSAARSDPCKFSSAFDVLGTCAGELHEALDGGCDDD
Ga0193698_10454681	3300021968	Soil	SMPWVRLSTWRDMRAREERVEALLEQWDSNVAAARNEPGKFSSAFEVLGTCAGELHEALDEGCDEED
Ga0222622_100175776	3300022756	Groundwater Sediment	VRLSRWRDMRAREERVEALLERWDSDVSAARSDPGTFLRAFEVLGTCADELHQALDGVCDDDYL
Ga0222622_105961951	3300022756	Groundwater Sediment	WRTLGGSMPWVRLATWSDMRAREERVKALLEQWDSDVAAARSNPCKFSSAFDVLGTCAAEVREALNEGGDDED
Ga0222622_109138971	3300022756	Groundwater Sediment	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCDEDCDDED
Ga0247796_10149762	3300023261	Soil	SMPWVRLSTWRDIRAREERVRTLLEQWDSDVSAARSDPGKFSSAFEVLGTCAGELHEALDGGCDDD
Ga0207642_107467041	3300025899	Miscanthus Rhizosphere	MRARDERVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED
Ga0207688_102111321	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDSCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED
Ga0207687_102026312	3300025927	Miscanthus Rhizosphere	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED
Ga0207709_105964021	3300025935	Miscanthus Rhizosphere	MRAREERVEALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEAL
Ga0207709_112382831	3300025935	Miscanthus Rhizosphere	MPWVRLSKWRDVCAREERVEALLQQWDSDVSAARSDPGKFSSAFEVLGTCADELREALDGVCDDDDDYF
Ga0207712_116339961	3300025961	Switchgrass Rhizosphere	MPWVRLSTWRDMRAREERVEALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED
Ga0207668_109106401	3300025972	Switchgrass Rhizosphere	MPWVRLSKWRDVCAREERVEALLQQWDSDVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY
Ga0207708_106192643	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	WVRLSTWRDMRARDERVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED
Ga0207648_101226261	3300026089	Miscanthus Rhizosphere	MPWVRLSTWRDMRAREVRVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED
Ga0207648_116332701	3300026089	Miscanthus Rhizosphere	MPWVRLSTWRDVCAREERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCAGELHEALDEGCDEED
Ga0207675_1000127888	3300026118	Switchgrass Rhizosphere	MPWVRLSTWRNMRAREVRVEALLEQWDSNVAAARSDPCKFSSAFEVLGTCAGELHEALDGDCAEDCDDED
Ga0208890_10332742	3300027523	Soil	MPWVRLSKWREVRAREERVEALLEQWDSDVSAARSDPGTFSRAFEVLGTCADDLREAMDGVCDDNDDYY
Ga0207428_1000129315	3300027907	Populus Rhizosphere	MPWVRLSKWKDIRAREERVEALLEQWDTDVSAARNDPCRFSSAFEVLGTCAGELHEAVDGRSDDDWADLD
Ga0247828_111907091	3300028587	Soil	MPWVRLAKWRHIRAREERVEALLEQWDLNVSAARSDPCKLSSAFDVLGTCAGELHEALDGGCDDD
Ga0307295_101174773	3300028708	Soil	LSACPGDSGRRTLGGRMPWVRLSKWRDMRAREERVEALLERWDSDVSAARSDPGTFLRAFEVLGTCADELHQALDGVCDDDYL
Ga0307279_100191392	3300028709	Soil	MPWVRLSTWSDMRARLERVEALLEQWDSDVAAARSDPCKFSSAFEVVGTCAGELYEALDGGG
Ga0307322_100486082	3300028710	Soil	MPWVRLSTWRDMRAREERVEALLEQWDSDVAAARSDPCKFSSAFEVLGTCACDLHEALDG
Ga0307293_101018911	3300028711	Soil	MPWVRLSTWTEMRAREQRLEALLEQWDSDVSAARSDPCKFSSAFDVLGTCAGELHEALDGGCDDD
Ga0307285_100278352	3300028712	Soil	MRAREERVEALLERWDSDVSAARSDPGTFLRAFEVLGTCADELHQALDGVCDDDYL
Ga0307285_100869471	3300028712	Soil	TKLGGSMPWVRLSAWRDMRAREERVEALLEQWDSNVAAARSDTRKFSSAFEVLGTCAGELHEALDGDCDEDCDDED
Ga0307303_100110223	3300028713	Soil	MPWVRLATWSDMRAREERVKALLEQWDSDVAAARINPCKFSSAFDVLGTCAAEVREALNEGGDDED
Ga0307307_101509271	3300028718	Soil	TEMRAREQRLEALLEQWDSDVSAARSDPCKFSSAFDVLGTCAGELHEALDGGCDDD
Ga0307315_102069491	3300028721	Soil	MPWVRLSTWTEMRAREQRVEAMLEQWDSDVSAARSDPCKFSSAFDVLGTCAGELHEALDGGCDDD
Ga0307319_103334551	3300028722	Soil	VPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDTRKFSSAFEVLGTCAGELHEAL
Ga0307318_100120734	3300028744	Soil	MRAREERVEALLERWDSDVSAARSDPGTFLRAFEVDGVCDDDYL
Ga0307297_100148602	3300028754	Soil	MPWVRLSTWTEMRAREQRLEALLEQWDSDVSAARSDPCKFSSAFDVLGTCAGELHEALDG
Ga0307316_100525091	3300028755	Soil	MRAREERVEALLEQWDSNVAAARSDTRKFSSAFEVLGTCAGELHEALDGDCDEDCDDED
Ga0307280_101193301	3300028768	Soil	MPWVRLSKWRDMRAREERVEALLERWDSDVSAARSDPGKFSRAFEVLGTCADELHEAMDGVCDDDDDYF
Ga0307288_100368591	3300028778	Soil	AGQPLESAGRKLGGSMPWVRLSTWRDMRAREERVDALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED
Ga0307282_101031213	3300028784	Soil	MDMRAREERVEALLERWDSDVSAARSDPGKFSRAFEVLGTCADELHEAMDGVCDDDDDYF
Ga0307282_101472422	3300028784	Soil	MPWVRLSRWRDMCAREERVKGLLERWDSDVSAARSDPGTFSRAFEVLGTCADELREALDGVCDDDDDYF
Ga0307323_100885201	3300028787	Soil	WTEMRAREQRLEALLEQWDSDVSAARSDPCKFSSAFDVLGTCAGELHEALDGGCDDD
Ga0307323_102483872	3300028787	Soil	MPWVRLSKWRDMRAREERVEALLERWDSDVSAARSDPGTFLRAFEVLGTCADELHQALDGVCDDDYL
Ga0307283_102051341	3300028790	Soil	AYNTGNRWRALGGSMPWVRLSTWSDMRARLERVEALLEQWDSDVAAARSDPCKFSSAFEVVGTCAGELYEALDGGGDDAN
Ga0307287_103422121	3300028796	Soil	VPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDTRKFSSAFEVLGTCAGELH
Ga0307284_103836741	3300028799	Soil	WVRLSRWRDMRAREERVEALLERWDSDVSAARSDPGKFSRAFEVLGTCADELHEAMDGVCDDDDDYF
Ga0307294_100958952	3300028810	Soil	MRAREERVEALLERWDSDVSAARSDPGTFLRAFEVLGTCADELHQALDGVCDDDYLYGLSRT
Ga0307294_102198411	3300028810	Soil	PWVRLSTWRDMRAREERVDALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED
Ga0307292_100194652	3300028811	Soil	VRLSRWRDMRAREERVEALLERWDSDVSAARSDPGKFSRAFEVLGTCADELHEAMDGVCDDDDDYF
Ga0307302_106468301	3300028814	Soil	VQARRQPLGRIALQTPERKLGGSVPWVRLSTWRDMRAREERVEALLEQWDSNVAAARSDTRKFSSAFEVLGTCAGELHEALDGDCDEDCDDED
Ga0307296_100321392	3300028819	Soil	ITLFRWRTLGGTMPWVRLSTWTEMRAREQRVEALLEQWDSDVSAARSDPCKFSSAFDVLGTCAGELHEALDGGCDDD
Ga0307312_104079181	3300028828	Soil	MPWVRLSTWRDMRAREERVDALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDGDCDEDCDDED
Ga0307289_100482781	3300028875	Soil	MPWVRLSTWRDMRAREERVDALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGC
Ga0307286_103687992	3300028876	Soil	MPWVRHSTWRHVRAREERVEELLEQWDSRVSAARSDPGKFSSAFEVLGMCADELHDALDGVCDDDYY
Ga0307277_100673172	3300028881	Soil	MPWVRLSKWRDMRAREERVEALLEQWDSDVLAARSAPCKFSSEFEVLGTCAGELHEALDGGCDDD
Ga0307277_105543441	3300028881	Soil	MPWVRLPTWSDMRAREERVKALLEQWDSDVAAARSNPCKFSSAFDVLGTCAAEVREALNEGGDDED
Ga0308200_10243192	3300030905	Soil	MPWVRLATWSDMRAREERVKALLEQWDSDVAAARSNPCKFSSAFDVLGTCAAEVREALNEGGDDED
Ga0308200_10836841	3300030905	Soil	RSGRTTLQPLESAGRKLGGSMPWVRLSTWRDMRAREERVEALLEQWDSNVAAARNDPGKFSSAFEVLGTCAGELHEALDEGCDEED
Ga0308201_100424021	3300031091	Soil	SMPWVRLSTWSDMRARLERVEALLEQWDSDVAAARSDPCKFSSAFEVVGTCAGELYEALDGGGDDAN
Ga0308197_100394491	3300031093	Soil	MRARLERVEALLEQWDSDVAAARSDPCKFSSAFEVVGTCAGELYEALDGGGDDAN
Ga0307499_100682681	3300031184	Soil	MPWVRLSTWRAMRAREERVEALLEQWDSNVAAARGDACKFSSAFEVLGTCAGELHEALDGDCDEDCDDED
Ga0308194_103562861	3300031421	Soil	MPWVRLATWSDMRAREERVKALLEQWDSDVAAARSDPCKFSSAFDVLGTCAAEVREAL
Ga0247829_111446442	3300033550	Soil	MPWVRLSMWREMRAREERVEALLEQWDSDVSAARSDPCKLSSAFDVLGTCAGELHEALDGGCDDD
Ga0247830_100744823	3300033551	Soil	FFTACLSDASRRTLGGSMPWVRLSTWRDVCAREERVEALLEQWDSHVSAARSDPGKFSSAFEVLGTCADELHEAVDGVCDDDYY
Ga0370544_19213_224_421	3300034447	Soil	MPWVRLSTWTEMRAREQRVEALLEQWDSDVSAARSDPCKFSSAFDVLGTCAGELHEALDGGCDDD
Ga0370546_033571_531_734	3300034681	Soil	MPWVRLSRWRDMCAREERVKGLLERWDSDVSAARSDPGTFSRAFEVLGTCADELREALDGVCDDDYF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050199

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences