NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F050194

Metagenome / Metatranscriptome Family F050194

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F050194
Family Type Metagenome / Metatranscriptome
Number of Sequences 145
Average Sequence Length 43 residues
Representative Sequence GVEDDLRDGENVDTATERVYKFVENKLIEKTREVEEELKRGK
Number of Associated Samples 110
Number of Associated Scaffolds 145

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 0.70 %
% of genes near scaffold ends (potentially truncated) 97.24 %
% of genes from short scaffolds (< 2000 bps) 88.28 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Duplodnaviria (77.931 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(14.483 % of family members)
Environment Ontology (ENVO) Unclassified
(50.345 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(58.621 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.14%    β-sheet: 0.00%    Coil/Unstructured: 52.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 145 Family Scaffolds
PF03796DnaB_C 33.10
PF13662Toprim_4 1.38
PF07733DNA_pol3_alpha 0.69
PF01807zf-CHC2 0.69
PF07235DUF1427 0.69
PF00154RecA 0.69
PF02811PHP 0.69
PF03819MazG 0.69
PF00082Peptidase_S8 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 145 Family Scaffolds
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 33.10
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 33.10
COG0358DNA primase (bacterial type)Replication, recombination and repair [L] 0.69
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.69
COG0587DNA polymerase III, alpha subunitReplication, recombination and repair [L] 0.69
COG2176DNA polymerase III, alpha subunit (gram-positive type)Replication, recombination and repair [L] 0.69
COG4317Xanthosine utilization system component, XapX domainNucleotide transport and metabolism [F] 0.69


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.62 %
UnclassifiedrootN/A21.38 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001836|RCM27_1028510All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage502Open in IMG/M
3300002161|JGI24766J26685_10134973All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage519Open in IMG/M
3300004128|Ga0066180_10312518All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage619Open in IMG/M
3300004240|Ga0007787_10052871All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1821Open in IMG/M
3300005517|Ga0070374_10145292All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1231Open in IMG/M
3300005517|Ga0070374_10159790All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1168Open in IMG/M
3300005517|Ga0070374_10196798Not Available1038Open in IMG/M
3300005525|Ga0068877_10699035All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage543Open in IMG/M
3300005528|Ga0068872_10381420All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage769Open in IMG/M
3300005581|Ga0049081_10075604All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1265Open in IMG/M
3300005581|Ga0049081_10100115All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1081Open in IMG/M
3300005581|Ga0049081_10111486All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1016Open in IMG/M
3300005662|Ga0078894_10144217Not Available2134Open in IMG/M
3300005662|Ga0078894_10226065Not Available1695Open in IMG/M
3300005662|Ga0078894_10565880All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1015Open in IMG/M
3300005662|Ga0078894_11119155All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage671Open in IMG/M
3300005662|Ga0078894_11432927All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage576Open in IMG/M
3300005941|Ga0070743_10265766All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage556Open in IMG/M
3300006875|Ga0075473_10016024All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2887Open in IMG/M
3300006875|Ga0075473_10335475All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage612Open in IMG/M
3300007559|Ga0102828_1014394Not Available1660Open in IMG/M
3300007559|Ga0102828_1018068All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1510Open in IMG/M
3300007590|Ga0102917_1067363Not Available1261Open in IMG/M
3300007600|Ga0102920_1133547All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage794Open in IMG/M
3300007603|Ga0102921_1174202All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage776Open in IMG/M
3300007603|Ga0102921_1323115All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage549Open in IMG/M
3300007624|Ga0102878_1050391All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1271Open in IMG/M
3300007651|Ga0102900_1148318Not Available517Open in IMG/M
3300007658|Ga0102898_1140896All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage565Open in IMG/M
3300007972|Ga0105745_1085514Not Available913Open in IMG/M
3300007992|Ga0105748_10067342All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1401Open in IMG/M
3300008052|Ga0102893_1213241All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage557Open in IMG/M
3300008107|Ga0114340_1250362All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage542Open in IMG/M
3300008108|Ga0114341_10138253All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1431Open in IMG/M
3300008108|Ga0114341_10311037All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage813Open in IMG/M
3300008108|Ga0114341_10445927All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage607Open in IMG/M
3300008110|Ga0114343_1224009All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage524Open in IMG/M
3300008111|Ga0114344_1100969All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1046Open in IMG/M
3300008113|Ga0114346_1000863All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes58444Open in IMG/M
3300008113|Ga0114346_1221381All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage734Open in IMG/M
3300008116|Ga0114350_1103868All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage891Open in IMG/M
3300008120|Ga0114355_1258565All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage506Open in IMG/M
3300008259|Ga0114841_1123848All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1075Open in IMG/M
3300008262|Ga0114337_1258172All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage660Open in IMG/M
3300008262|Ga0114337_1322844All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage539Open in IMG/M
3300008267|Ga0114364_1035759All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1899Open in IMG/M
3300009158|Ga0114977_10672499Not Available553Open in IMG/M
3300009161|Ga0114966_10125353All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1698Open in IMG/M
3300009161|Ga0114966_10580756All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage628Open in IMG/M
3300009164|Ga0114975_10302181All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage886Open in IMG/M
3300009164|Ga0114975_10560768All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage612Open in IMG/M
3300009181|Ga0114969_10688642All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage551Open in IMG/M
3300009223|Ga0103850_1024655All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage697Open in IMG/M
3300009419|Ga0114982_1098277All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage905Open in IMG/M
3300010312|Ga0102883_1093625All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage874Open in IMG/M
3300010370|Ga0129336_10644178All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage563Open in IMG/M
3300010388|Ga0136551_1055754All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage716Open in IMG/M
3300011268|Ga0151620_1185438All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage632Open in IMG/M
3300012000|Ga0119951_1056708All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1088Open in IMG/M
3300012667|Ga0157208_10022256Not Available850Open in IMG/M
3300013004|Ga0164293_10037873Not Available3967Open in IMG/M
(restricted) 3300013131|Ga0172373_10359107All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage919Open in IMG/M
(restricted) 3300013131|Ga0172373_10754119All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage571Open in IMG/M
3300017788|Ga0169931_10080869All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3231Open in IMG/M
3300017788|Ga0169931_10935996All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage543Open in IMG/M
3300020083|Ga0194111_10131141Not Available1946Open in IMG/M
3300020083|Ga0194111_10857824All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage542Open in IMG/M
3300020084|Ga0194110_10303739Not Available1126Open in IMG/M
3300020155|Ga0194050_1033503All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay1400Open in IMG/M
3300020190|Ga0194118_10420555Not Available669Open in IMG/M
3300020193|Ga0194131_10116562Not Available1400Open in IMG/M
3300020493|Ga0208591_1019190Not Available877Open in IMG/M
3300020519|Ga0208223_1000366All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay11363Open in IMG/M
3300020519|Ga0208223_1000681All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay8038Open in IMG/M
3300020528|Ga0208224_1012509All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1277Open in IMG/M
3300020603|Ga0194126_10080466All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2765Open in IMG/M
3300020603|Ga0194126_10354669Not Available954Open in IMG/M
3300021424|Ga0194117_10350761All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage685Open in IMG/M
3300021519|Ga0194048_10290070All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage591Open in IMG/M
3300021956|Ga0213922_1033201All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1223Open in IMG/M
3300023174|Ga0214921_10040342Not Available4325Open in IMG/M
3300024346|Ga0244775_10279709Not Available1386Open in IMG/M
3300024346|Ga0244775_10765070All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage774Open in IMG/M
3300024348|Ga0244776_10164032All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1608Open in IMG/M
3300024348|Ga0244776_10854484All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage544Open in IMG/M
3300024357|Ga0255165_1031783All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage943Open in IMG/M
3300024503|Ga0255152_1000559Not Available9571Open in IMG/M
3300024505|Ga0255150_1000718Not Available8703Open in IMG/M
3300024865|Ga0256340_1166280All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage527Open in IMG/M
3300025732|Ga0208784_1182701All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage614Open in IMG/M
3300026455|Ga0255155_1055578All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage664Open in IMG/M
3300026457|Ga0255160_1020764All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1176Open in IMG/M
3300027139|Ga0255082_1046751Not Available680Open in IMG/M
3300027144|Ga0255102_1046167Not Available707Open in IMG/M
3300027155|Ga0255081_1008882All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Trinavirus2422Open in IMG/M
3300027242|Ga0208806_1039148All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage958Open in IMG/M
3300027329|Ga0255109_1092028Not Available632Open in IMG/M
3300027586|Ga0208966_1206564Not Available500Open in IMG/M
3300027600|Ga0255117_1038612All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1008Open in IMG/M
3300027601|Ga0255079_1020620All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1523Open in IMG/M
3300027621|Ga0208951_1107453Not Available756Open in IMG/M
3300027697|Ga0209033_1173366All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage658Open in IMG/M
3300027710|Ga0209599_10195529All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage545Open in IMG/M
3300027732|Ga0209442_1184254Not Available783Open in IMG/M
3300027744|Ga0209355_1305127All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage602Open in IMG/M
3300027754|Ga0209596_1121741All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1199Open in IMG/M
3300027770|Ga0209086_10395337All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage556Open in IMG/M
3300027782|Ga0209500_10444882All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage511Open in IMG/M
3300027816|Ga0209990_10155991All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1078Open in IMG/M
3300027892|Ga0209550_10374918All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage889Open in IMG/M
3300027892|Ga0209550_10415801All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage829Open in IMG/M
3300028025|Ga0247723_1007445All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay4638Open in IMG/M
3300028025|Ga0247723_1030997All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1685Open in IMG/M
(restricted) 3300028571|Ga0247844_1082677All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1570Open in IMG/M
3300031758|Ga0315907_10242505All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1497Open in IMG/M
3300031758|Ga0315907_10266671All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1415Open in IMG/M
3300031758|Ga0315907_10712848Not Available761Open in IMG/M
3300031787|Ga0315900_10225465All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1629Open in IMG/M
3300031787|Ga0315900_10402181All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1080Open in IMG/M
3300031787|Ga0315900_10874219All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage608Open in IMG/M
3300031857|Ga0315909_10221648All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1478Open in IMG/M
3300031963|Ga0315901_10296014All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1343Open in IMG/M
3300032050|Ga0315906_10197064All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1899Open in IMG/M
3300032050|Ga0315906_10258368All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1595Open in IMG/M
3300032050|Ga0315906_10791143All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage745Open in IMG/M
3300032050|Ga0315906_10847291All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage709Open in IMG/M
3300032116|Ga0315903_10946864All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage609Open in IMG/M
3300032116|Ga0315903_11146757All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage529Open in IMG/M
3300033557|Ga0316617_102598051All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage526Open in IMG/M
3300033981|Ga0334982_0466032All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage563Open in IMG/M
3300034013|Ga0334991_0132857All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1153Open in IMG/M
3300034019|Ga0334998_0428211All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage753Open in IMG/M
3300034051|Ga0335024_0418833All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage666Open in IMG/M
3300034063|Ga0335000_0403685All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage812Open in IMG/M
3300034066|Ga0335019_0027844Not Available3904Open in IMG/M
3300034068|Ga0334990_0282052All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage904Open in IMG/M
3300034071|Ga0335028_0408781Not Available773Open in IMG/M
3300034082|Ga0335020_0366333All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage698Open in IMG/M
3300034093|Ga0335012_0116866All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1478Open in IMG/M
3300034101|Ga0335027_0574755All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage691Open in IMG/M
3300034102|Ga0335029_0620082All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage602Open in IMG/M
3300034120|Ga0335056_0631024All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage550Open in IMG/M
3300034166|Ga0335016_0027040All Organisms → Viruses → Predicted Viral4736Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater14.48%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake12.41%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton9.66%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater9.66%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine9.66%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater8.28%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.21%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake5.52%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic3.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater2.76%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.76%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water2.07%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.07%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater1.38%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.38%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.38%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.69%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.69%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.69%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.69%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.69%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water0.69%
Pond Fresh WaterEnvironmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water0.69%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.69%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.69%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.69%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001836Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM27, ROCA_DNA191_0.2um_MCP-N_C_3aEnvironmentalOpen in IMG/M
3300002161Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USAEnvironmentalOpen in IMG/M
3300004128Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (version 2)EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005528Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007590Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02EnvironmentalOpen in IMG/M
3300007600Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3EnvironmentalOpen in IMG/M
3300007603Estuarine microbial communities from the Columbia River estuary - metaG 1568-02EnvironmentalOpen in IMG/M
3300007624Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02EnvironmentalOpen in IMG/M
3300007651Estuarine microbial communities from the Columbia River estuary - metaG 1555C-3EnvironmentalOpen in IMG/M
3300007658Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3EnvironmentalOpen in IMG/M
3300007972Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0umEnvironmentalOpen in IMG/M
3300007992Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2umEnvironmentalOpen in IMG/M
3300008052Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008111Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008259Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NAEnvironmentalOpen in IMG/M
3300008262Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009223Microbial communities of water from Amazon river, Brazil - RCM3EnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300010312Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02EnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010388Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV, may 2015EnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300012000Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007AEnvironmentalOpen in IMG/M
3300012667Freshwater microbial communities from Maskinonge River, Ontario, Canada - S15EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300020083Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020155Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-10mEnvironmentalOpen in IMG/M
3300020190Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surfaceEnvironmentalOpen in IMG/M
3300020193Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120mEnvironmentalOpen in IMG/M
3300020493Freshwater microbial communities from Lake Mendota, WI - 14NOV2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020519Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300020528Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020603Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150mEnvironmentalOpen in IMG/M
3300021424Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surfaceEnvironmentalOpen in IMG/M
3300021519Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5mEnvironmentalOpen in IMG/M
3300021956Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MGEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024357Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8dEnvironmentalOpen in IMG/M
3300024503Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8hEnvironmentalOpen in IMG/M
3300024505Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8hEnvironmentalOpen in IMG/M
3300024865Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025732Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026455Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8hEnvironmentalOpen in IMG/M
3300026457Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8hEnvironmentalOpen in IMG/M
3300027139Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8hEnvironmentalOpen in IMG/M
3300027144Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_0hEnvironmentalOpen in IMG/M
3300027155Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8hEnvironmentalOpen in IMG/M
3300027242Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027329Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8hEnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027600Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8hEnvironmentalOpen in IMG/M
3300027601Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepB_8hEnvironmentalOpen in IMG/M
3300027621Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027697Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027710Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)EnvironmentalOpen in IMG/M
3300027732Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027744Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300028571 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch201714.5m_1EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300034013Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034EnvironmentalOpen in IMG/M
3300034019Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049EnvironmentalOpen in IMG/M
3300034051Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097EnvironmentalOpen in IMG/M
3300034063Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034068Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M
3300034093Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034120Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172EnvironmentalOpen in IMG/M
3300034166Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
RCM27_102851023300001836Marine PlanktonYESIKIGIGVEDTVREGETVNTATERVYQFVEEKLIQKTTEVEEELKGGK*
JGI24766J26685_1013497313300002161Freshwater And SedimentIGVEDTVRQGENVDSATERVYKFVEXKLIEKTREVEEELKRGK*
Ga0066180_1031251813300004128Freshwater LakeVEDDLRLGENVELATERVYKFVEDKLIEKTREVEEELKRGK*
Ga0007787_1005287113300004240Freshwater LakeGNYESIRINIGVEDDVRNGENVDSATERVYTFVENKLIEKTREVEQELKNGK*
Ga0070374_1014529213300005517Freshwater LakeIKIGVGIEDDVRQGETVDAATERIYAFVENKLIQKTQEVEEELKRGK*
Ga0070374_1015979033300005517Freshwater LakeSGETVDSATERVYAFVERKLVQKTSEVEEELKSGKQ*
Ga0070374_1019679813300005517Freshwater LakeVEDNVRDGENVDTATERVYKFVEEKLIEKTSEIEKELKNGK*
Ga0068877_1069903513300005525Freshwater LakeGENVDSATERVYKFVEEKLIQKTREVEEELSGGKK*
Ga0068872_1038142013300005528Freshwater LakeSIRINVGVEDDVRKGENVETATERVYAFVENKLIQKTREVEKELNSGK*
Ga0049081_1007560433300005581Freshwater LenticINVGVEDDVRKGENVETATERVYAFVENKLIQKTREVEKELNSGK*
Ga0049081_1010011533300005581Freshwater LenticGENVDSATERVYAFVENKLIEKTREVEKELKSGK*
Ga0049081_1011148613300005581Freshwater LenticGNYESIRINVGVEDDVRKGENVETATERVYAFVENKLIQKTREVEKELNSGK*
Ga0078894_1014421713300005662Freshwater LakeYESIRINIGVEDDVRNGENVDSATERVYTFVENKLIEKTREVEQELKNGK*
Ga0078894_1022606513300005662Freshwater LakeGVEDDLRDGENVDTATERVYKFVENKLIEKTREVEEELKRGK*
Ga0078894_1056588033300005662Freshwater LakeREGENADTATERVYQFVESKLIEKTREVEEELSSRGK*
Ga0078894_1111915513300005662Freshwater LakeSIRINVGVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELKNGK*
Ga0078894_1143292733300005662Freshwater LakeESIKIGVGIEDDVRQGETVDAATERIYAFVENKLIQKTQEVEEELKRGK*
Ga0070743_1026576633300005941EstuarineRIGLGVEDWVREGENADTATERVYQFVESKLIEKTREVEEELSSRGK*
Ga0075473_1001602413300006875AqueousENVDSATERIYKFVEDKLIQKTREVEEELSGGKK*
Ga0075473_1033547533300006875AqueousDTVRQGENVDSATERVYKFVEDKLIEKTREVEEELKRGK*
Ga0099848_101471343300007541AqueousVEDFVREEENVDKAMERVYAFVEKKLVEKVATIDSELKK*
Ga0102828_101439443300007559EstuarineGVGIEDDLRDGENVDTATERVYKFVEDKLIEKTREVEEELKRGK*
Ga0102828_101806813300007559EstuarineKIGVGIEDDVRQGETVDAATERVYAFVENKLIQKTQEVEEELKRGKQ*
Ga0102917_106736333300007590EstuarineESIKIGVGVEDDLRDGENVDTATERVYKFVENKLIEKTREVEEELKRGK*
Ga0102920_113354733300007600EstuarineYESIKVSVGVEDFVRSDENVDKATERVYAFVEGKLIEKMQEIETELKS*
Ga0102921_117420233300007603EstuarineVRQGETVDAATERVYAFVESKLIEKTQEVEEELKRGK*
Ga0102921_132311533300007603EstuarineRSGENVDTATERVYKFVEEKLIQKTQEVEEELKRGK*
Ga0102878_105039133300007624EstuarineESIKIGIGVEDDVRQGEHVDAATERVYKFVEEKLIQKTQEVEEELKRGK*
Ga0102900_114831833300007651EstuarineSGENVDTATERVYKFVEDKLIQKTREVEEELKRGK*
Ga0102898_114089613300007658EstuarineRQGENADSATDRVYKFVEEKLIEKTAEMEEELKGGK*
Ga0105745_108551413300007972Estuary WaterIEDDLRDGENVDAATERVYKFVEDKLIEKTREVEEELKRGK*
Ga0105748_1006734233300007992Estuary WaterDDLRSGENVDTATERVYKFVEDKLIQKTREGEEELKRGK*
Ga0105748_1014879313300007992Estuary WaterSIGVEDFLRSEENVDKATERVYAFVEGKLIEKMQEIEKELKS*
Ga0102893_121324133300008052EstuarineGETVDAATERVYAFVESKLVQKTSEVEEELKSGK*
Ga0114340_125036213300008107Freshwater, PlanktonIRINVGVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELKNGK*
Ga0114341_1013825313300008108Freshwater, PlanktonIKIGIGVDDFVRDGETVDDATERVYKFVESKLIAKTQEVEEELNGSK*
Ga0114341_1031103733300008108Freshwater, PlanktonGETATTATERVYKFVEEKLIEKTREVEKELSGGK*
Ga0114341_1044592713300008108Freshwater, PlanktonNVGVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELKNGK*
Ga0114343_122400913300008110Freshwater, PlanktonVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELKNGK*
Ga0114344_110096933300008111Freshwater, PlanktonGENVETATERVYAFVENKLIQKTREVEKELNSGK*
Ga0114346_1000863243300008113Freshwater, PlanktonVTTRVKVDTATERVYKFVEDKLIEKTREVEEELKSGK*
Ga0114346_122138133300008113Freshwater, PlanktonFVRDGENVDSATERVYEFVESKLIEKTREVEEELRGK*
Ga0114350_110386833300008116Freshwater, PlanktonLGNYESIRINVGVEDDVRKGENVETATERVYAFVENKLIQKTREVEKELNSGK*
Ga0114355_125856523300008120Freshwater, PlanktonIRINVGVEDDVRKGENVETATERVYAFVENKLIQKTREVEKELNSGK*
Ga0114841_112384813300008259Freshwater, PlanktonIGVEDDVRSGENVNSATERVYKFVEEKLIEKTREVEKELNNGK*
Ga0114337_125817213300008262Freshwater, PlanktonSIKIGIGVEDNVRSGENVDTATERVYAFVENKLIEKTREVEEELKRGK*
Ga0114337_132284413300008262Freshwater, PlanktonNYESIRINIGVEDDVRKGENVDAATERVYAFVENKLIEKTREVEKELNSGK*
Ga0114364_103575913300008267Freshwater, PlanktonIEDNVRSGENVDTATERVYAFVENKLIEKTREVEEELKRAK*
Ga0114977_1067249913300009158Freshwater LakeIGVGIEDDLRDGENVDAATERVYKFVEDKLIEKTREVEEELKRGK*
Ga0114966_1012535333300009161Freshwater LakeVGIEDDLRDGENVDAATERVYKFVEEKLIEKTREVEEELKRGK*
Ga0114966_1058075613300009161Freshwater LakeFVREGETVDAAADRVYKFVEDKLIQKTQEVEEELRGSK*
Ga0114975_1030218133300009164Freshwater LakeEDDLRSGENVDTATERVYKFVEDKLIQKTREVEEELKRGK*
Ga0114975_1056076833300009164Freshwater LakeSIKIGIGIEDIVRHGETVETATERVYKFVEEKLIQKTTEVEEELKSGK*
Ga0114969_1068864233300009181Freshwater LakeGNYESIKIGVGIEDDVRQGETVDAATERVYAFVESKLIEKTQEVEEELKRGK*
Ga0103850_102465533300009223River WaterLGNYESIKIGIGIEDFVRSGETVESATERVYAFVENKLIEKTQEIEKELKNNG*
Ga0114982_109827713300009419Deep SubsurfaceSVGVEDDVRNGETVDAATERVYAFVENKLIQKTSEVEKELSNGK*
Ga0102883_109362533300010312EstuarineIGVGIEDDLRSGENVDTATERVYKFVEDKLIQKTREVEEELKRGK*
Ga0129336_1064417813300010370Freshwater To Marine Saline GradientGENADTATERVYKFVEEKLIQKTREVEEELKSGK*
Ga0136551_105575433300010388Pond Fresh WaterSIKIGIGIEDDIRQGETVDSATERVYEFVENKLIEKTREVEEELKRGK*
Ga0151620_118543813300011268FreshwaterEDDVRQGETVEAATERVYTFVENKLIQKTEEVEEELKRGK*
Ga0119951_105670833300012000FreshwaterGVGVEDDLREGENVDAATERVYKFVEDKLIEKTREVEEELKNGK*
Ga0157208_1002225613300012667FreshwaterYESIKIGIGVEDIVRQGENVDTATERVYEFVESKLIEKTREVEEELKRGK*
Ga0164293_1003787363300013004FreshwaterYESIRINVGVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELNSGK*
(restricted) Ga0172373_1035910733300013131FreshwaterVGVEDDVRKGENVETATERVYAFVENKLIQKTREVEKELNNGK*
(restricted) Ga0172373_1075411933300013131FreshwaterVGVEDDVRKGENVETATERVYAFVENKLIQKTREVEKELNSGK*
Ga0169931_1008086953300017788FreshwaterIGVGIEDWVRDGETADSATERVYKFVENKLIEKTREIEQELKSGK
Ga0169931_1093599613300017788FreshwaterIGLGVEDIVRSGENVTSATERVYKFVEEKIIEKTREVEEELRGSKK
Ga0194111_1013114113300020083Freshwater LakeVEDDVRKGENVDSATERVYAFVESKLIEKTREVEKELNSGKT
Ga0194111_1085782413300020083Freshwater LakeGIGVEDDVRKGENVDSATERVYAFVESKLIEKTREVEKELNSGK
Ga0194110_1030373913300020084Freshwater LakeNYESVRIGIGVEDDVRKGENVDSATERVYAFVESKLIEKTREVEKELNSGKT
Ga0194050_103350313300020155Anoxic Zone FreshwaterLGVQDYVRDGENVNAAMDRVYAFVEDKLITKMEEIEKELKG
Ga0194118_1042055513300020190Freshwater LakeENIKINIGVEDDVRKGENVDLATERVYAFVENKLIQKTREVEEELKSGK
Ga0194131_1011656213300020193Freshwater LakeEDDVRKGENVDSATERVYAFVESKLIEKTREVEKELNSGKT
Ga0208591_101919033300020493FreshwaterNVRNGENVDTATERVYKFVEEKLIEKTQEIEKELKDGKXSSHFPGXKK
Ga0208223_1000366183300020519FreshwaterGVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELKNGK
Ga0208223_100068193300020519FreshwaterGVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELNSGK
Ga0208224_101250933300020528FreshwaterKIGVGVEDSVRDGETVNDATERVYKFVEDKLIEKTQDIEKELKSGK
Ga0194126_1008046643300020603Freshwater LakeDVRKGENVDSATERVYAFVESKLIEKTREVEKELNSGKT
Ga0194126_1035466933300020603Freshwater LakeGIGVEDSVRSGETVSAATERVYKFVEDKLIEKTREIEEELKGGKTGH
Ga0194117_1035076113300021424Freshwater LakeIGVEDDVRKGENVDSATERVYAFVESKLIEKTREVEKELNSGK
Ga0194048_1029007013300021519Anoxic Zone FreshwaterDLRDGENVDTATERVYKFVEDKLIEKTREVEEELKRGK
Ga0213922_103320133300021956FreshwaterIGIGIEDIVRQGETVDTATERVYKFVEEKLIQKTIEVEEELKSGK
Ga0214921_1004034213300023174FreshwaterNYESIKIGIGIEDDVRQGETVDAATERVYAFVENKLIEKTQEVEEELKRGK
Ga0244775_1027970913300024346EstuarineRSGENVDTATERVYKFVEEKLIQKTREVEEELKRGK
Ga0244775_1076507033300024346EstuarineEDDLRSGENVDTATERVYKFVEDKLIQKTREVEEELKRGK
Ga0244776_1016403233300024348EstuarineDLRSGENVDTATERVYKFVEDKLIQKTREVEEELKRGK
Ga0244776_1085448433300024348EstuarineHGETVSVATERVYKFVEEKLIEKTREIEKELSVSDKQ
Ga0255165_103178333300024357FreshwaterIKIGIGIEDWVRDGENVDSATERVYKFVEDKLVEKTREVEEELKRGK
Ga0255152_100055913300024503FreshwaterEDDVRQGETVDAATERVYGFVENKLIEKTQEVEEELKRGK
Ga0255150_100071813300024505FreshwaterVRSGENVDSATERIYKFVEDKLIQKTREVEEELSGGKK
Ga0256340_116628013300024865FreshwaterGIGVEDWVRDGENADSATERVYKFVEDKLIQKTREIEEELKSGK
Ga0208784_118270113300025732AqueousDTVRQGENVDSATERVYKFVEDKLIEKTREVEEELKRGK
Ga0255155_105557813300026455FreshwaterVRQGETVDAATERVYGFVENKLIEKTQEVEEELKRGK
Ga0255160_102076433300026457FreshwaterIGVEDWVRDGENADSATERVYKFVEDKLIQKTREIEEELKSGK
Ga0255082_104675113300027139FreshwaterVGVEDDLRSGESVDAATERVYKFVEDKLIQKTREVEEELKSGK
Ga0255102_104616733300027144FreshwaterKRDEENIDQAFERVYKFVENKLIEKSNEAKEFKSE
Ga0255081_100888213300027155FreshwaterGVGVEDDLRSGESVDAATERVYKFVEDKLIQKTREVEEELKSGK
Ga0208806_103914833300027242EstuarineNIGVEDIVRSGENVDTATERVYKFVEEKLIQKTQEVEEELKRGK
Ga0255109_109202833300027329FreshwaterIEDDLRDGENVDAATERVYKFVEDKLIEKTREVEEELKRGK
Ga0208966_120656413300027586Freshwater LenticIGVEDDVRSGENVDSATERVYKFVEEKLIKKTQEIEEELNSGK
Ga0255117_103861213300027600FreshwaterKIGIGIEDDVRQGENVDTATERVYAFVENKLIEKTREVEEELKRGK
Ga0255079_102062033300027601FreshwaterGVEDDLRSGETVNVATERVYKFVEEKLIEKTREVEEELKRGK
Ga0208951_110745313300027621Freshwater LenticVRSGENVDSATERVYKFVEEKLIKKTQEIEEELNSGK
Ga0209033_117336633300027697Freshwater LakeKIGIGVDDFVREGETVDTAADRVYKFVEDKLIQKTQEVEEELRGSK
Ga0209599_1019552913300027710Deep SubsurfaceSVGVEDDVRNGETVDAATERVYAFVENKLIQKTSEVEKELSNGK
Ga0209442_118425413300027732Freshwater LakeISIGVEDDVRSGENVDSATERVYKFVEEKLIKKTQEIEEELNSGK
Ga0209355_130512733300027744Freshwater LakeIEDDLRSGENVDTATERVYKFVEEKLIQKTREVEEELKRGK
Ga0209596_112174133300027754Freshwater LakeRINIGVEDDVRSGENVDSATERVYAFVENKLIEKTREVEKELKSGK
Ga0209086_1039533723300027770Freshwater LakeMKEDDVRSGETVDSATERVYAFVENKLVQKTSEVEEELKSGKQ
Ga0209500_1044488213300027782Freshwater LakeYESIRINIGVEDDVRSGENVDSATERVYAFVENKLIEKTREVEKELKSGK
Ga0209990_1015599113300027816Freshwater LakeQGETVDAATERVYAFVEGKLIAKTAEVEEELKNGK
Ga0209550_1037491833300027892Freshwater LakeKINVGVEDDVRSGETVDAATERVYAFVENKLIQKTAEVEEELKSGK
Ga0209550_1041580133300027892Freshwater LakeDLRAGENVDTATERVYKFVEDKLIEKTREVEEELKRGK
Ga0247723_100744513300028025Deep Subsurface SedimentGVEDSVRDGETVNDATERVYKFVENKLIEKTQDIEKELKSGK
Ga0247723_103099713300028025Deep Subsurface SedimentGIEDNVRQGENVDTATERVYKFVEDKLIEKTREVEEELSSRGK
(restricted) Ga0247844_108267713300028571FreshwaterRINVGVEDDVRKGENVETATERVYAFVENKLIQKTREVEKELNSGK
Ga0315907_1024250513300031758FreshwaterVRDGENADSATERVYQFVENKLIEKTREVEEELKRGKQ
Ga0315907_1026667133300031758FreshwaterDFVRSGETADSATERVYKFVEDKLIEKTREIEEELKSGK
Ga0315907_1071284813300031758FreshwaterIGIEDIVRSGETVNAATERVYKFVEEKLIEKTREVEEELKGGKTKS
Ga0315900_1022546533300031787FreshwaterGVEDFVRDGENADSATERVYKFVEDKLIQKTREIEEELKSGK
Ga0315900_1040218113300031787FreshwaterVEDDVRQGENVDTATERVYKFVEEKLIQKTREVEEELKSGK
Ga0315900_1087421913300031787FreshwaterYESIRINVGVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELKNGK
Ga0315909_1022164833300031857FreshwaterDVRKGENVDAATERVYAFVENKLIEKTREVEKELNSGK
Ga0315901_1029601413300031963FreshwaterNYESIRINVGVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELKNGK
Ga0315906_1019706443300032050FreshwaterRKGENVETATERVYAFVENKLIEKTREVEKELNSGK
Ga0315906_1025836833300032050FreshwaterDIVRSGENVDSATERVYKFVEEKLIQKTREVEEELSGGKK
Ga0315906_1079114333300032050FreshwaterDVRSGETATTATERVYKFVEEKLIEKTREVEKELSGGK
Ga0315906_1084729133300032050FreshwaterINIGVEDDVRNGENVDSATERVYTFVENKLIEKTREVEQELKNGK
Ga0315903_1094686433300032116FreshwaterIRINIGVEDDVRKGENVDAATERVYAFVENKLIEKTREVEKELNSGK
Ga0315903_1114675713300032116FreshwaterDNVRSGENVDTATERVYAFVENKLIEKTREVEEELKRGK
Ga0316617_10259805113300033557SoilIKIGIGIEDWVRDGENADTATERVYKFVEDKLIEKTREVEEELKHGK
Ga0334982_0466032_410_5623300033981FreshwaterYESIKIGIGVEDDVRQGETVDAATERVYTFVENKLIEKTQEVEEELKRGK
Ga0334991_0132857_1043_11533300034013FreshwaterRQGETVDAATERVYAFVESKLIEKTQEVEEELKSGK
Ga0334998_0428211_613_7533300034019FreshwaterIGIGVEDIVRSGENVDSATERVYKFVEDKLIQKTREVEEELSGGKK
Ga0335024_0418833_1_1113300034051FreshwaterREGETVDAAADRVYKFVEDKLIQKTQEVEEELRGSK
Ga0335000_0403685_1_1233300034063FreshwaterEDDVRKGENVETATERVYAFVENKLIEKTREVEKELNSGK
Ga0335019_0027844_1_1173300034066FreshwaterFVRDGETVDAAADRVYKFVEDKLIQKTQEVEEELRGSK
Ga0334990_0282052_2_1513300034068FreshwaterESIKIGIGVEDDLRLGENVESATERVYKFVEDKLIEKTREVEEELKRGK
Ga0335028_0408781_1_1083300034071FreshwaterKRDDENIDQAFERVYKFVENKLIEKSNEAKEFKSE
Ga0335020_0366333_1_1323300034082FreshwaterVGIEDDVRSGENVDAATERVYKFVENKLIEKTTEIEKELKDGK
Ga0335012_0116866_1_1413300034093FreshwaterKIGIGVEDDLRLGENVESATERVYKFVEDKLIEKTREVEEELKRGK
Ga0335027_0574755_3_1613300034101FreshwaterGNYESIRINVGVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELNSGK
Ga0335029_0620082_3_1133300034102FreshwaterRDGETVNDATERVYKFVENKLIEKTQDIEKELKSGK
Ga0335056_0631024_1_1173300034120FreshwaterDLRLGETVDFATERVYKFVEDKLIQKTREVEEELKSAK
Ga0335016_0027040_3_1283300034166FreshwaterVEDDVRKGENVETATERVYAFVENKLIEKTREVEKELKNGK


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