Metagenome / Metatranscriptome Family F050163

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F050163
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	58 residues
Representative Sequence	MPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPAEGE
Number of Associated Samples	90
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.59 %
% of genes near scaffold ends (potentially truncated)	21.38 %
% of genes from short scaffolds (< 2000 bps)	77.93 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.552 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.897 % of family members)
Environment Ontology (ENVO)	Unclassified (28.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.586 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.68% Coil/Unstructured: 69.32%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF04392	ABC_sub_bind	6.21
PF00072	Response_reg	5.52
PF08402	TOBE_2	4.14
PF00528	BPD_transp_1	2.07
PF02738	MoCoBD_1	2.07
PF01314	AFOR_C	1.38
PF01527	HTH_Tnp_1	1.38
PF13599	Pentapeptide_4	1.38
PF01408	GFO_IDH_MocA	1.38
PF01717	Meth_synt_2	1.38
PF03631	Virul_fac_BrkB	0.69
PF00300	His_Phos_1	0.69
PF00296	Bac_luciferase	0.69
PF13229	Beta_helix	0.69
PF13632	Glyco_trans_2_3	0.69
PF02518	HATPase_c	0.69
PF13761	DUF4166	0.69
PF12697	Abhydrolase_6	0.69
PF02416	TatA_B_E	0.69
PF08734	GYD	0.69
PF13442	Cytochrome_CBB3	0.69
PF03009	GDPD	0.69
PF01841	Transglut_core	0.69
PF14595	Thioredoxin_9	0.69
PF02371	Transposase_20	0.69
PF04773	FecR	0.69
PF01575	MaoC_dehydratas	0.69
PF06983	3-dmu-9_3-mt	0.69
PF13103	TonB_2	0.69
PF01569	PAP2	0.69
PF08546	ApbA_C	0.69
PF04055	Radical_SAM	0.69
PF00034	Cytochrom_C	0.69
PF13432	TPR_16	0.69
PF13561	adh_short_C2	0.69
PF00496	SBP_bac_5	0.69
PF03724	META	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	6.21
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	1.38
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	1.38
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.69
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.69
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.69
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.69
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.69
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.69
COG3187	Heat shock protein HslJ	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.69
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.69
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.55 %
Unclassified	root	N/A	3.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.55 %
Unclassified	root	N/A	3.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.55 %
Unclassified	root	N/A	3.45 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	70.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.21 %
Unclassified	root	N/A	3.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.69 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	70.34 %
Unclassified	root	N/A	3.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.07 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.69 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	70.34 %
Unclassified	root	N/A	3.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.07 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.69 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	65.52 %
Unclassified	root	N/A	3.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.38 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.69 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	65.52 %
Unclassified	root	N/A	3.45 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	65.52 %
Unclassified	root	N/A	3.45 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0891495	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	826	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100406290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	824	Open in IMG/M
3300000443\|F12B_10226775	Not Available	1060	Open in IMG/M
3300000955\|JGI1027J12803_100516727	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300002558\|JGI25385J37094_10024471	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300002558\|JGI25385J37094_10054183	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300002558\|JGI25385J37094_10091142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	922	Open in IMG/M
3300002562\|JGI25382J37095_10137265	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	813	Open in IMG/M
3300004267\|Ga0066396_10042466	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300004281\|Ga0066397_10004078	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300004281\|Ga0066397_10006166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1374	Open in IMG/M
3300005166\|Ga0066674_10151615	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1094	Open in IMG/M
3300005166\|Ga0066674_10400993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300005171\|Ga0066677_10539266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300005177\|Ga0066690_10069888	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2194	Open in IMG/M
3300005180\|Ga0066685_10000824	All Organisms → cellular organisms → Bacteria	12124	Open in IMG/M
3300005180\|Ga0066685_10041414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2922	Open in IMG/M
3300005186\|Ga0066676_10018544	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3592	Open in IMG/M
3300005186\|Ga0066676_10100929	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1751	Open in IMG/M
3300005332\|Ga0066388_100113673	All Organisms → cellular organisms → Bacteria	3210	Open in IMG/M
3300005332\|Ga0066388_100745203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1580	Open in IMG/M
3300005332\|Ga0066388_101600306	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300005332\|Ga0066388_102446176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	948	Open in IMG/M
3300005332\|Ga0066388_105253127	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300005444\|Ga0070694_101076646	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300005445\|Ga0070708_100556791	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1081	Open in IMG/M
3300005447\|Ga0066689_10114160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1567	Open in IMG/M
3300005451\|Ga0066681_10039599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2531	Open in IMG/M
3300005518\|Ga0070699_100493719	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300005526\|Ga0073909_10234766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	809	Open in IMG/M
3300005549\|Ga0070704_102069690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300005557\|Ga0066704_10675495	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300005574\|Ga0066694_10078984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1522	Open in IMG/M
3300005713\|Ga0066905_100475795	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1033	Open in IMG/M
3300005713\|Ga0066905_100705098	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	866	Open in IMG/M
3300005713\|Ga0066905_100831023	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	803	Open in IMG/M
3300005713\|Ga0066905_101306004	Not Available	653	Open in IMG/M
3300005764\|Ga0066903_100464959	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300007255\|Ga0099791_10085158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1444	Open in IMG/M
3300007255\|Ga0099791_10244255	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300007255\|Ga0099791_10289289	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300007258\|Ga0099793_10016171	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2989	Open in IMG/M
3300007258\|Ga0099793_10208934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	937	Open in IMG/M
3300009012\|Ga0066710_100066993	All Organisms → cellular organisms → Bacteria	4579	Open in IMG/M
3300009012\|Ga0066710_100087181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4106	Open in IMG/M
3300009012\|Ga0066710_102000218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	859	Open in IMG/M
3300009012\|Ga0066710_103193582	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	630	Open in IMG/M
3300009137\|Ga0066709_100670315	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1487	Open in IMG/M
3300009162\|Ga0075423_10471176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1320	Open in IMG/M
3300009162\|Ga0075423_10919447	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	928	Open in IMG/M
3300009804\|Ga0105063_1014698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300009817\|Ga0105062_1067273	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	675	Open in IMG/M
3300010043\|Ga0126380_10169943	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300010043\|Ga0126380_10982124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	709	Open in IMG/M
3300010046\|Ga0126384_10816359	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300010046\|Ga0126384_10861616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	815	Open in IMG/M
3300010046\|Ga0126384_12209013	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300010046\|Ga0126384_12479342	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300010047\|Ga0126382_12385379	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300010304\|Ga0134088_10085362	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300010304\|Ga0134088_10701235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300010358\|Ga0126370_10356180	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1185	Open in IMG/M
3300011271\|Ga0137393_10800543	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300012096\|Ga0137389_10039553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3492	Open in IMG/M
3300012200\|Ga0137382_10181624	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300012202\|Ga0137363_10737127	Not Available	835	Open in IMG/M
3300012202\|Ga0137363_11143911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300012203\|Ga0137399_10849667	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	769	Open in IMG/M
3300012203\|Ga0137399_10945270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	726	Open in IMG/M
3300012203\|Ga0137399_10960281	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	720	Open in IMG/M
3300012206\|Ga0137380_10049104	All Organisms → cellular organisms → Bacteria	3868	Open in IMG/M
3300012285\|Ga0137370_10656560	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	651	Open in IMG/M
3300012285\|Ga0137370_10777270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300012353\|Ga0137367_10069783	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2610	Open in IMG/M
3300012360\|Ga0137375_10129370	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2507	Open in IMG/M
3300012362\|Ga0137361_11742373	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300012401\|Ga0134055_1071465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300012685\|Ga0137397_10537463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	870	Open in IMG/M
3300012685\|Ga0137397_10627954	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	799	Open in IMG/M
3300012918\|Ga0137396_10010427	All Organisms → cellular organisms → Bacteria	5669	Open in IMG/M
3300012918\|Ga0137396_10167913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1604	Open in IMG/M
3300012918\|Ga0137396_10604312	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	811	Open in IMG/M
3300012922\|Ga0137394_11269884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300012922\|Ga0137394_11269886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300012925\|Ga0137419_10879124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300012929\|Ga0137404_10145083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1968	Open in IMG/M
3300012929\|Ga0137404_12176366	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300012930\|Ga0137407_10064779	Not Available	3021	Open in IMG/M
3300012944\|Ga0137410_10172870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1659	Open in IMG/M
3300012944\|Ga0137410_10738724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	822	Open in IMG/M
3300015358\|Ga0134089_10337317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300015371\|Ga0132258_10277169	All Organisms → cellular organisms → Bacteria → Proteobacteria	4114	Open in IMG/M
3300015371\|Ga0132258_12327140	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1343	Open in IMG/M
3300016270\|Ga0182036_11805314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300017659\|Ga0134083_10350773	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300018032\|Ga0187788_10457926	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300018431\|Ga0066655_10004008	All Organisms → cellular organisms → Bacteria → Proteobacteria	5832	Open in IMG/M
3300018431\|Ga0066655_10008397	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4369	Open in IMG/M
3300018468\|Ga0066662_12090678	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300018468\|Ga0066662_12128202	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300019789\|Ga0137408_1090986	All Organisms → cellular organisms → Bacteria	2770	Open in IMG/M
3300019789\|Ga0137408_1233228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2072	Open in IMG/M
3300019789\|Ga0137408_1375182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1696	Open in IMG/M
3300020199\|Ga0179592_10314629	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300025910\|Ga0207684_10021722	All Organisms → cellular organisms → Bacteria	5479	Open in IMG/M
3300026296\|Ga0209235_1031375	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2737	Open in IMG/M
3300026297\|Ga0209237_1024679	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3369	Open in IMG/M
3300026298\|Ga0209236_1076095	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1570	Open in IMG/M
3300026314\|Ga0209268_1118929	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300026325\|Ga0209152_10372808	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300026332\|Ga0209803_1332434	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300026342\|Ga0209057_1085741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1318	Open in IMG/M
3300026536\|Ga0209058_1104470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1426	Open in IMG/M
3300026537\|Ga0209157_1300930	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300027646\|Ga0209466_1001549	All Organisms → cellular organisms → Bacteria → Proteobacteria	4637	Open in IMG/M
3300027903\|Ga0209488_10275593	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1259	Open in IMG/M
3300028536\|Ga0137415_10091949	All Organisms → cellular organisms → Bacteria	2890	Open in IMG/M
3300028536\|Ga0137415_10184543	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1910	Open in IMG/M
3300031170\|Ga0307498_10033966	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1278	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10018313	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1802	Open in IMG/M
3300031199\|Ga0307495_10111382	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	663	Open in IMG/M
3300031538\|Ga0310888_10477147	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	743	Open in IMG/M
3300031716\|Ga0310813_11129789	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300031720\|Ga0307469_10011091	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4427	Open in IMG/M
3300031720\|Ga0307469_10037164	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2911	Open in IMG/M
3300031720\|Ga0307469_10063167	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2407	Open in IMG/M
3300031720\|Ga0307469_10102021	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300031720\|Ga0307469_10127027	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1858	Open in IMG/M
3300031740\|Ga0307468_100304826	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1159	Open in IMG/M
3300031740\|Ga0307468_100983496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	740	Open in IMG/M
3300031740\|Ga0307468_101010764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	732	Open in IMG/M
3300031820\|Ga0307473_10145727	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300031820\|Ga0307473_10323547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	980	Open in IMG/M
3300032076\|Ga0306924_10311471	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300032179\|Ga0310889_10294726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	781	Open in IMG/M
3300032180\|Ga0307471_100036748	All Organisms → cellular organisms → Bacteria → Proteobacteria	3863	Open in IMG/M
3300032180\|Ga0307471_100485219	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300032180\|Ga0307471_100891368	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300032180\|Ga0307471_101216583	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300032180\|Ga0307471_101236854	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	910	Open in IMG/M
3300032180\|Ga0307471_103708071	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300032205\|Ga0307472_100104812	Not Available	1956	Open in IMG/M
3300032205\|Ga0307472_101377555	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300032205\|Ga0307472_102190058	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	557	Open in IMG/M
3300033433\|Ga0326726_11945162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.24%
Host-Associated	Host-Associated	2.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.24%
Plants	Host-Associated → Plants	2.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.38%
Peat	Environmental → Terrestrial → Peat	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.31%
Loam	Environmental → Terrestrial → Soil → Loam	14.48%
Sand	Environmental → Terrestrial → Soil → Sand	2.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	13.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.38%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08914952	2228664022	Soil	MPQPQLVQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFXTWKRIRSEFQVESTG
INPhiseqgaiiFebDRAFT_1004062901	3300000364	Soil	MPQPQLVQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQVESTG*
F12B_102267753	3300000443	Soil	MPQPQIIQIALDSGGHNALGVDQEGGVWRGRIQRATSGEEFIVWKRIRSEFQEG*
JGI1027J12803_1005167272	3300000955	Soil	PQLVQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQVESTG*
JGI25385J37094_100244713	3300002558	Grasslands Soil	MPQPQLVQVALDAQGHAIGVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAEGEPR*
JGI25385J37094_100541831	3300002558	Grasslands Soil	MPQPQLVQVALDAQGHNTIGVDREGGVWRGRIQRDRSGEEFIVWKHMRSEFP
JGI25385J37094_100911421	3300002558	Grasslands Soil	MPQPQLVQVALDAQGHAIAVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAEGEPR*
JGI25382J37095_101372651	3300002562	Grasslands Soil	MPQPQLVQVALDAQGHNTIGVDREGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR*
Ga0066396_100424661	3300004267	Tropical Forest Soil	MAQPQLIQISLDSGGHNAIGVDQEGGVWRGRIQRATTGEEFITWKRIRSEFQES*
Ga0066397_100040782	3300004281	Tropical Forest Soil	MAQPQLIQIAMDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQVESAG*
Ga0066397_100061664	3300004281	Tropical Forest Soil	MAQPQLIQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRMRSEFQVESTG*
Ga0066674_101516153	3300005166	Soil	MPQPQLVQVALDAQGHAIAVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFP
Ga0066674_104009931	3300005166	Soil	MPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPTEGEPPR*
Ga0066677_105392662	3300005171	Soil	MPQPQLVQVALDAQSHAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPAEGEPR*
Ga0066690_100698883	3300005177	Soil	MAQPQLIQIALDSGGHNAIGVDQEGGLWRGRIQRATSGEEFIVWKRMRSEFQEG*
Ga0066685_100008243	3300005180	Soil	MAQPHLIQIALDTGGHNAAIGVDQEGGVWRGRIQRSTSGEEFVVWKRVRSEFQESGSGEASKTAAAD*
Ga0066685_100414143	3300005180	Soil	MPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR*
Ga0066676_100185441	3300005186	Soil	MPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPTEGEPPR*
Ga0066676_101009292	3300005186	Soil	MSQPQLVQIALDAQGHNTIGVDRDGGVWRGRIQRDRAGDEFIVWKRMRSEFPADAPVAAEGEPR*
Ga0066388_1001136734	3300005332	Tropical Forest Soil	MAQPHLIQITLDSGGHNAIAVDQEGGVWRGRIQRATSGEEFIVWKRIRSEFQES*
Ga0066388_1007452033	3300005332	Tropical Forest Soil	MAQPQLVQIALDSGGHNAIGVDQEGGVWRGRIQRAPSGEEFIVWKRIRSEFQES*
Ga0066388_1016003062	3300005332	Tropical Forest Soil	MAQPQLIQIALESGSHNAIGLDQEGGIWRGRIQRAPSGEELIVWKRMRSEFPQDPS*
Ga0066388_1024461762	3300005332	Tropical Forest Soil	MTEPQFIQIALESGSHNALGVDREAGVWRGRIQRAASGEELIVWKRTRSEFQQSSS*
Ga0066388_1052531271	3300005332	Tropical Forest Soil	MAQPQLVQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQVESAAAISEPQK*
Ga0070694_1010766461	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAQPQLIQIALESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRVRSEFQEG*
Ga0070708_1005567912	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPQLIQVALDAQGHNTIGVDQEGGVWHGRIQRATGGDDFSVWKRIRSEFQES*
Ga0066689_101141602	3300005447	Soil	VMPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR*
Ga0066681_100395993	3300005451	Soil	MAQPQHIQIALDSGGHNAIGVDQEGGLWRGRIQRATSGEEFIVWKRMRSEFQEG*
Ga0070699_1004937191	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAQPQLIQIALESGSHNAIGVDQERGIWRGRRIQRALSGEELIVWKRMRSEFQQSSS*
Ga0073909_102347661	3300005526	Surface Soil	MAQPQLIQIAIESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRIRSEFQEG*
Ga0070704_1020696902	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAQPQLIQIALESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKR
Ga0066704_106754953	3300005557	Soil	ALDAQGHAIAVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAEGEPR*
Ga0066694_100789841	3300005574	Soil	VMPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPTEGEPPR*
Ga0066905_1004757952	3300005713	Tropical Forest Soil	MAEPHLIQIALESGSHNAIGVDQEGGVWRGRIQRAPSGEELIVWKRMRSEFQQSSS*
Ga0066905_1007050983	3300005713	Tropical Forest Soil	MAQPQLIQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRMRSE
Ga0066905_1008310233	3300005713	Tropical Forest Soil	MAEPKLIQIALESGSHNVIGVDQEGGVWRGRIQRAASGEELIVWKRMRSEFQQSSP*
Ga0066905_1013060042	3300005713	Tropical Forest Soil	KLIQIALESGSHNAIGVDQEGGVWRGRIQRAPSGEELIVWKRMRSEFQQSSS*
Ga0066903_1004649594	3300005764	Tropical Forest Soil	MAEPQLIQIALESGSHNAIGVDREGGVWRGRIQRAASGEELIVWKRMRSEFQQSSS*
Ga0099791_100851583	3300007255	Vadose Zone Soil	MPQPQLVQVALDAQGHYAIGVDRDGGLWRGRMQRDRSGEEFIVWKRMRSEFPADTPAEGEPR*
Ga0099791_102442551	3300007255	Vadose Zone Soil	DAQGHTTIGVDRDGGVWRGRIQRDRGGEEFIVWKRVRSEFPADPPAEGEAR*
Ga0099791_102892892	3300007255	Vadose Zone Soil	MSQPQLVQIALDAQGHNTIGVDRDGGVWRGRIQRDRAGEEFIVWKRMRSEFPTDAPAVVAEGEPR*
Ga0099793_100161713	3300007258	Vadose Zone Soil	MPQPQLVQVALDAQGHYAIGVDRDGGLWRGRIQRDRSGEEFIVWKRMRSEFPADTPAEGEPR*
Ga0099793_102089343	3300007258	Vadose Zone Soil	MPQPQLVQVALDAQGHYAIGVDRDGGVWRGRIQRDRGGEEFIVWKRVRSEFPADPPAEGEAR*
Ga0066710_1000669936	3300009012	Grasslands Soil	MPQPQLVQVALDAQGHTTIGVDRDGGVWRGRIQRDRGGEEFIVWKRMRSEFPSDPPAAGEAR
Ga0066710_1000871814	3300009012	Grasslands Soil	MAQPQLIQIALDSGGHNAIGVDQEGGLWRGRIQRATSGEEFIVWKRMRSEFQEG
Ga0066710_1020002181	3300009012	Grasslands Soil	MTQPQLIQVTLDAGGHNAVGVDHDGGIWRGRIQRDRNGEEYVVWKRMRSEFPADTPTEGGGS
Ga0066710_1031935821	3300009012	Grasslands Soil	LVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPTEGEPPR
Ga0066709_1006703154	3300009137	Grasslands Soil	MPQPQLVQVALDAQGHNAMGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR*
Ga0075423_104711762	3300009162	Populus Rhizosphere	MSQPQLVQIALDAQGHNTIGVDRDGGVWRGRIQRDRAGEEFIVWKRMRSEFPADAPAVVAEGEPR*
Ga0075423_109194471	3300009162	Populus Rhizosphere	MPQPQLVQITLDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQEG*
Ga0105063_10146982	3300009804	Groundwater Sand	MTLDAQGHNAIGVDREGGVWRGRIQWDRAGEEFIVWKSMRCEFPADTPAEGEPR*
Ga0105062_10672732	3300009817	Groundwater Sand	VTLDAQGHNAIGVDREGGVWRGRIQWDRAGEEFIVWKRMRSEFPADTPAEREPRGRFLRL
Ga0126380_101699432	3300010043	Tropical Forest Soil	MAQPQLIQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRMRSEFQAESAG*
Ga0126380_109821241	3300010043	Tropical Forest Soil	MAQPQLIQIAIDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIR
Ga0126384_108163592	3300010046	Tropical Forest Soil	MAEPQLIQIALETGSHNAIGVDQEGGVWRGRIQRAPSGEELIVWKRMRSEFQQSSS*
Ga0126384_108616161	3300010046	Tropical Forest Soil	MAQPQLIQISLETGGHNAIGVDQEGGVWRGRIQRAPTGEEFITWKRIRSEFQES*
Ga0126384_122090132	3300010046	Tropical Forest Soil	MAQPQLIQIAIDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQVESAG*
Ga0126384_124793422	3300010046	Tropical Forest Soil	EPQLIQIARESGSHNAIGVDREGGVWRGRIQRAASGEELIVWKRMRSEFQQSSS*
Ga0126382_123853791	3300010047	Tropical Forest Soil	MAQPQLVQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQAESTT*
Ga0134088_100853622	3300010304	Grasslands Soil	MTQPQLVQVALDAQGHAIAVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAEGEPR*
Ga0134088_107012351	3300010304	Grasslands Soil	MPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPTEGQPPR*
Ga0126370_103561802	3300010358	Tropical Forest Soil	MAQPQLIQIAIDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQVESAA*
Ga0137393_108005432	3300011271	Vadose Zone Soil	MPQPQLVQVALDAQGHYAIGVDRDGGVWRGRMQRDRSGEEFIVWKRMRSEFPADTPAEGEPR*
Ga0137389_100395532	3300012096	Vadose Zone Soil	MLQPHLVQVAPDAQGHNTIGVDRDGGVWRGRIQRDRAGEEFIVWKRMRSEFPADTPAEGEPR*
Ga0137382_101816244	3300012200	Vadose Zone Soil	MAQPQLIQIALESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRVRSAFQEG*
Ga0137363_107371272	3300012202	Vadose Zone Soil	MAQPQLIQIALEGGGHNAIGVDQEGGVWRGRIQRATSGEEFIVWKRIRSEFQEG*
Ga0137363_111439112	3300012202	Vadose Zone Soil	MPQPQLVQVALDAQGHYAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPAEGEPR*
Ga0137399_108496671	3300012203	Vadose Zone Soil	QPQLVQVALDAQGHYAIGVDRDGGVWRGRMQRDRSGEEFIVWKRMRSEFPADTPAEGEPR
Ga0137399_109452702	3300012203	Vadose Zone Soil	MPQPQLVQVALDAQGHYAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPTDTPAEGEPR*
Ga0137399_109602812	3300012203	Vadose Zone Soil	MSQPQLVQIALDAQGHNAIGVDRDGGIWRGRIQRDRAGEEFIAWKRMRSEFPADAPAETESR*
Ga0137380_100491045	3300012206	Vadose Zone Soil	MPQPQLVQVALDAQGHNAVGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR*
Ga0137370_106565601	3300012285	Vadose Zone Soil	MAQPQLIQIALESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRVRSE
Ga0137370_107772701	3300012285	Vadose Zone Soil	MPQPQLVQVALDAQGHNAIGVDRDGGDWRGRIQRDRSGEEFIVWKRMR
Ga0137367_100697834	3300012353	Vadose Zone Soil	MSQPQLVQLALDAQGHSTIGVDRDGGVWRGRIQRDKGGEEFIVRKRMRSEFPPDTAAEGEPR*
Ga0137375_101293703	3300012360	Vadose Zone Soil	MSQPQLVQLALDAQGHSTIGVDRDGGVWRGRIQRDKGGEEFIVWKRMRSEFPPDTAAEGEPR*
Ga0137361_117423731	3300012362	Vadose Zone Soil	MPQPQLVQVALDAQGHNTIGVDREGGVWRGRIQRDRSGEEFIVWKHMRSEFPADAPAEGEAR*
Ga0134055_10714651	3300012401	Grasslands Soil	MPQPQLVQVALDAQGHAIAVDRVGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAEGEPR*
Ga0137397_105374632	3300012685	Vadose Zone Soil	MSQPQLVQIALDAQGHNTIGVDRDGGVWRGRIQRDRAGEEFIVWKRMRSEFPADAPAAAEGEPR*
Ga0137397_106279543	3300012685	Vadose Zone Soil	MPQPQLVQVTVDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTP
Ga0137396_100104272	3300012918	Vadose Zone Soil	MPQPQLVQVALDAQGHNTIGVDGDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADSPAAEGEPR*
Ga0137396_101679132	3300012918	Vadose Zone Soil	MPQPQLVQVALDAQGHYVIGVDRDGGVWRGRMQRDRSGDEFIVWKRMRSEFPADTPAEGEPR*
Ga0137396_106043123	3300012918	Vadose Zone Soil	MPQPQLVQVELDAQGHNTIGVDSDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR*
Ga0137394_112698841	3300012922	Vadose Zone Soil	LVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKQMRSEFPADAPAEGEPR*
Ga0137394_112698861	3300012922	Vadose Zone Soil	LVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR*
Ga0137419_108791241	3300012925	Vadose Zone Soil	MPQAQLVQVSVDAQGHNAIGVDRDGGVWRGRIQRDRVGEEFIVWKRMRSEFPADTPAEGEPR*
Ga0137404_101450833	3300012929	Vadose Zone Soil	MPQPQLVQVTLDAQGHNAIGVDRDGGIWRGRIQRDRGGEEFIAWKRMRSEFPAETPTEGEPR*
Ga0137404_121763661	3300012929	Vadose Zone Soil	MPQPQLVQVTVDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFP
Ga0137407_100647792	3300012930	Vadose Zone Soil	MPQPQLVQVALDAQGHNTIGVDRDGGVWRGRIQRDRAGEEFIVWKRMRSEFPADTPAEGEPR*
Ga0137410_101728704	3300012944	Vadose Zone Soil	MPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADEPAEGEPR*
Ga0137410_107387242	3300012944	Vadose Zone Soil	MPQPQLVQVALDAQGHYVIGVDRDGGVWRGRMQRDRSGDEFIVWKRMRSEFPADTPPEGEPPR*
Ga0134089_103373171	3300015358	Grasslands Soil	MPQPQLVQVALDAQRHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPTEGEPPR*
Ga0132258_102771694	3300015371	Arabidopsis Rhizosphere	MAQPQLIQIALEGGGHNALAVDHEGAVWRGRIQRATSGEEFIVWKRIRSEFQES*
Ga0132258_123271403	3300015371	Arabidopsis Rhizosphere	MAQPQLIQIAIESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRVRSEFQEG*
Ga0182036_118053141	3300016270	Soil	MAQPQLVHVALDSGGHNAIGVDHEGGVWRGRIQRAASGEEFIVWKRIRSEFQES
Ga0134083_103507732	3300017659	Grasslands Soil	MPQPQLVQVALDAQGHNAIGVDREGGVWRGRIQRDRAGEEFIVWKRMRSEFPAEPKKNRDEER
Ga0187788_104579262	3300018032	Tropical Peatland	MAQPQLIQVALDSGGHNAIGVDHDGAVWRGRIQRATNGEEFIVWKRIRSEFQET
Ga0066655_100040087	3300018431	Grasslands Soil	MAQPHLIQIALDTGGHNAAIGVDQEGGVWRGRIQRSTSGEEFVVWKRVRSEFQESGSGEASKTAAAD
Ga0066655_100083973	3300018431	Grasslands Soil	MPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPTEGEPPR
Ga0066662_120906782	3300018468	Grasslands Soil	MPQPQLVQVALDAQGHAIAVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAEGEP
Ga0066662_121282021	3300018468	Grasslands Soil	MPQPQLVQVALDAQGHNAIGVDREGGVWRGRIQRDRAGEEFIVWKRMRSEFPADTPAEGEPR
Ga0137408_10909861	3300019789	Vadose Zone Soil	MPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR
Ga0137408_12332283	3300019789	Vadose Zone Soil	MPQPQLVQVTVDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPAEGEPPR
Ga0137408_13751823	3300019789	Vadose Zone Soil	MAQPQLIQIALEGGGHNAIGVDQEGGVWRGRIQRATSGEEFIVWKRIRSEFQEG
Ga0179592_103146291	3300020199	Vadose Zone Soil	MPQPQLVQVALDAQGHYAIGVDRDGGLWRGRMQRDRSGEEFIVWKRMRSEFPADTPAEGEPR
Ga0207684_100217229	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPQLIQVALDAQGHNTIGVDQEGGVWHGRIQRATGGDDFSVWKRIRSEFQES
Ga0209235_10313753	3300026296	Grasslands Soil	MPQPQLVQVALDAQGHAIGVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAEGEP
Ga0209237_10246792	3300026297	Grasslands Soil	MPQPQLVQVALDAQGHNTIGVDREGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR
Ga0209236_10760953	3300026298	Grasslands Soil	MPQPQLVQVALDAQGHAIGVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAE
Ga0209268_11189291	3300026314	Soil	RRDGCVMPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPTEGEPPR
Ga0209152_103728082	3300026325	Soil	LIQIALDSGGHNAIGVDQEGGLWRGRIQRATSGEEFIVWKRMRSEFQEG
Ga0209803_13324341	3300026332	Soil	VMPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTP
Ga0209057_10857413	3300026342	Soil	MPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPAEGE
Ga0209058_11044703	3300026536	Soil	MTQPQLVQVALDAQGHAIAVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAEGEP
Ga0209157_13009301	3300026537	Soil	VMPQPQLVQVALDAQGHAIAVDRDGGVWRGRIQRDRSGEELIVWKRMRSEFPADTPAEGEPR
Ga0209466_10015496	3300027646	Tropical Forest Soil	MAQPQLIQIAMDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQVESAG
Ga0209488_102755932	3300027903	Vadose Zone Soil	MLQPQLVQVALDAQGHNTIGVDRDGGVWRGRIQRDRAGEEFIVWKRMRSEFPADTPAEGEPR
Ga0137415_100919494	3300028536	Vadose Zone Soil	MPQPQLVQVALDAQGHYAIGVDRDGGVWRGRIQRDRSGEEFIVWKRMRSEFPADTPAEGEPR
Ga0137415_101845431	3300028536	Vadose Zone Soil	MPQPQLVQVALDAQGHNTIGVDSDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPTEGEPR
Ga0307498_100339662	3300031170	Soil	MAQPQLIQIALESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRVRSEFQES
(restricted) Ga0255310_100183131	3300031197	Sandy Soil	MLQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRAGEEFIVWKRMRSEFPADTPAEGEPR
Ga0307495_101113822	3300031199	Soil	MPQPQLVQVALDAQGHNALGVDRDGGVWRGRIQRDRNGEEFIVWKHMRSEFPADTPAEGEPR
Ga0310888_104771472	3300031538	Soil	MAQPQLIQIAIESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRIRSEFQEG
Ga0310813_111297892	3300031716	Soil	MAQPQLIQIALESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRIRSEFQEG
Ga0307469_100110913	3300031720	Hardwood Forest Soil	MSQPQLVQIALDAQGHNAIGVDRDGGVWRGRIQRDRAGEEFIVWKRMRSEFPADSPAEAESR
Ga0307469_100371643	3300031720	Hardwood Forest Soil	MSQPQLVQIALDAQGHNTIGVDREGGVWRGRIQRDRAGEEFIVWKRMRSEFPADAPVAVEGEPR
Ga0307469_100631672	3300031720	Hardwood Forest Soil	VMPQPQLVQVALDAQGHNAIGVDRDGGVWRGRIQRDRSGEEFIVWKHMRSEFPADTPAEGEPR
Ga0307469_101020212	3300031720	Hardwood Forest Soil	MAQPQLIQIALESGGHNAIGVDQEGGVWRGRIQRATSGEEFIVWKRIRSEFQEG
Ga0307469_101270275	3300031720	Hardwood Forest Soil	MAQPQLIQIALEGGGHNAIGVEQEGGVRCGRIQRATSGEEFIVWKRIRSEFQES
Ga0307468_1003048262	3300031740	Hardwood Forest Soil	MSQPQLVKIALDAQGHNAIGVDRDGGVWRGRIQRDRAGEEFIVWKRMRSEFPADSPAEAESR
Ga0307468_1009834963	3300031740	Hardwood Forest Soil	MAQPQFIQIALEGGGHNAIGVEQEGGVRCGRIQRATSGEEFIVWKRIRSEFQES
Ga0307468_1010107642	3300031740	Hardwood Forest Soil	MAQPQLIQIAVESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRIRSEFQEG
Ga0307473_101457272	3300031820	Hardwood Forest Soil	MAQPQLVQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQVESTG
Ga0307473_103235472	3300031820	Hardwood Forest Soil	MSQPQLVQIALDAQGHNTIGVDRDGGVWRGRIQRDRAGDEFIVWKRMRSEFPADAPVAVEGEPR
Ga0306924_103114711	3300032076	Soil	MAQPQLIQVALDSGGHNAIGVDHDGGLWRGRIQRATSGEEFIVWKRIRSEFQES
Ga0310889_102947262	3300032179	Soil	AQPQLIQIAIESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRIRSEFQEG
Ga0307471_1000367483	3300032180	Hardwood Forest Soil	MPQPQLVQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQVESTG
Ga0307471_1004852191	3300032180	Hardwood Forest Soil	MAQPQLVQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFIVWKRIRSEFQEG
Ga0307471_1008913681	3300032180	Hardwood Forest Soil	MAQPQLIQIALDSGGHNAIGVDQEGGVWRGRIQRSTSGEEFIVWKRIRSEFQEN
Ga0307471_1012165831	3300032180	Hardwood Forest Soil	MAQPQLIQIALESGSHNAIGVDQERGIWRGRRIQRALSGEELIVWKRMRSEFQQSSS
Ga0307471_1012368542	3300032180	Hardwood Forest Soil	MAQPQLVQIALESGGHNAIGVDQEGGVWRRRIQRATSGEEFIVWKRIRSEFQET
Ga0307471_1037080711	3300032180	Hardwood Forest Soil	MAQPQLVQIALESGGHNAIGVDQEGGVWRGRIQRATSGEEFIVWKRIRSEFQES
Ga0307472_1001048123	3300032205	Hardwood Forest Soil	MAQPQLVQIALDSGGHNAIGVDQEGGVWRGRIQRATSGEEFITWKRIRSEFQMEST
Ga0307472_1013775552	3300032205	Hardwood Forest Soil	MAQPQLIQIALDSGGHNAIGVDQEGGVWRGRIQRSTSGEEFIVWKRIRSEFQES
Ga0307472_1021900582	3300032205	Hardwood Forest Soil	AVESGGHNALGVDQEGAVWRGRIQRATSGEEFIVWKRIRSEFQEG
Ga0326726_119451621	3300033433	Peat Soil	MAQPQLIQIALESGGHNAIGVDQEGGVWRGRIQRAPTGEEFIVWKRIRSEFQEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters