Metagenome / Metatranscriptome Family F049983

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049983
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	44 residues
Representative Sequence	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGTDN
Number of Associated Samples	56
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.89 %
% of genes near scaffold ends (potentially truncated)	22.60 %
% of genes from short scaffolds (< 2000 bps)	70.55 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.055 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (28.082 % of family members)
Environment Ontology (ENVO)	Unclassified (51.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (85.616 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF13640	2OG-FeII_Oxy_3	13.01
PF14907	NTP_transf_5	11.38
PF08245	Mur_ligase_M	8.94
PF05402	PqqD	6.50
PF01026	TatD_DNase	4.07
PF02566	OsmC	1.63
PF02574	S-methyl_trans	0.81
PF13177	DNA_pol3_delta2	0.81
PF13471	Transglut_core3	0.81
PF12055	DUF3536	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.63
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.63
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.81
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.16 %
Unclassified	root	N/A	43.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.16 %
Unclassified	root	N/A	43.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.05 %
Unclassified	root	N/A	43.84 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	4.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	28.08 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	4.11 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.74 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	28.08 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	4.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	28.08 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	4.11 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	2.05 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	4.11 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	2.05 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	1.37 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Candidatus Methanoperedenaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae	4.11 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	2.05 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	1.37 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Candidatus Methanoperedens	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens	4.11 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	2.05 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	1.37 %
Roseimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Candidatus Methanoperedens nitroreducens	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens → Candidatus Methanoperedens nitroreducens	4.11 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	2.05 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	1.37 %
Roseimicrobium gellanilyticum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium → Roseimicrobium gellanilyticum	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002120\|C687J26616_10086481	Not Available	1024	Open in IMG/M
3300002407\|C687J29651_10096293	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	995	Open in IMG/M
3300002407\|C687J29651_10235041	Not Available	583	Open in IMG/M
3300002407\|C687J29651_10290221	Not Available	516	Open in IMG/M
3300002503\|C687J35164_10073174	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1034	Open in IMG/M
3300010391\|Ga0136847_13591491	Not Available	687	Open in IMG/M
3300012174\|Ga0137338_1002119	All Organisms → cellular organisms → Bacteria	3310	Open in IMG/M
3300012174\|Ga0137338_1123474	Not Available	568	Open in IMG/M
3300012675\|Ga0137337_1002959	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300012675\|Ga0137337_1027074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	852	Open in IMG/M
3300014873\|Ga0180066_1000192	All Organisms → cellular organisms → Bacteria	5199	Open in IMG/M
3300014873\|Ga0180066_1000192	All Organisms → cellular organisms → Bacteria	5199	Open in IMG/M
3300014873\|Ga0180066_1061723	Not Available	751	Open in IMG/M
3300014873\|Ga0180066_1113703	Not Available	558	Open in IMG/M
3300014877\|Ga0180074_1001507	All Organisms → cellular organisms → Bacteria	4017	Open in IMG/M
3300014877\|Ga0180074_1158303	Not Available	506	Open in IMG/M
3300014881\|Ga0180094_1047519	Not Available	910	Open in IMG/M
3300014881\|Ga0180094_1077531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	742	Open in IMG/M
3300014882\|Ga0180069_1001900	All Organisms → cellular organisms → Bacteria	4350	Open in IMG/M
3300014882\|Ga0180069_1048336	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300014882\|Ga0180069_1048599	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens → Candidatus Methanoperedens nitroreducens	951	Open in IMG/M
3300014884\|Ga0180104_1001166	All Organisms → cellular organisms → Bacteria	5269	Open in IMG/M
3300014884\|Ga0180104_1001166	All Organisms → cellular organisms → Bacteria	5269	Open in IMG/M
3300014884\|Ga0180104_1003884	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300015254\|Ga0180089_1051213	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300015256\|Ga0180073_1003417	All Organisms → cellular organisms → Bacteria	2223	Open in IMG/M
3300015256\|Ga0180073_1007501	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1720	Open in IMG/M
3300015256\|Ga0180073_1043009	Not Available	907	Open in IMG/M
3300015259\|Ga0180085_1015420	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300015259\|Ga0180085_1112109	Not Available	808	Open in IMG/M
3300018031\|Ga0184634_10061959	Not Available	1572	Open in IMG/M
3300018031\|Ga0184634_10102205	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens → Candidatus Methanoperedens nitroreducens	1252	Open in IMG/M
3300018052\|Ga0184638_1018110	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300018052\|Ga0184638_1037519	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens → Candidatus Methanoperedens nitroreducens	1755	Open in IMG/M
3300018052\|Ga0184638_1045246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1601	Open in IMG/M
3300018053\|Ga0184626_10065792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1524	Open in IMG/M
3300018053\|Ga0184626_10065792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1524	Open in IMG/M
3300018053\|Ga0184626_10223486	Not Available	794	Open in IMG/M
3300018053\|Ga0184626_10254187	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	737	Open in IMG/M
3300018053\|Ga0184626_10289732	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens → Candidatus Methanoperedens nitroreducens	681	Open in IMG/M
3300018055\|Ga0184616_10026082	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens → Candidatus Methanoperedens nitroreducens	1829	Open in IMG/M
3300018059\|Ga0184615_10006417	All Organisms → cellular organisms → Bacteria	6374	Open in IMG/M
3300018059\|Ga0184615_10006417	All Organisms → cellular organisms → Bacteria	6374	Open in IMG/M
3300018059\|Ga0184615_10021196	All Organisms → cellular organisms → Bacteria	3581	Open in IMG/M
3300018059\|Ga0184615_10529055	Not Available	629	Open in IMG/M
3300018063\|Ga0184637_10096874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium → Roseimicrobium gellanilyticum	1815	Open in IMG/M
3300018063\|Ga0184637_10223707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	1151	Open in IMG/M
3300018063\|Ga0184637_10331951	Not Available	917	Open in IMG/M
3300018063\|Ga0184637_10493413	Not Available	713	Open in IMG/M
3300018063\|Ga0184637_10514994	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens → Candidatus Methanoperedens nitroreducens	693	Open in IMG/M
3300018063\|Ga0184637_10673441	Not Available	570	Open in IMG/M
3300018068\|Ga0184636_1000419	All Organisms → cellular organisms → Bacteria	10294	Open in IMG/M
3300018068\|Ga0184636_1004257	All Organisms → cellular organisms → Bacteria	3892	Open in IMG/M
3300018068\|Ga0184636_1004257	All Organisms → cellular organisms → Bacteria	3892	Open in IMG/M
3300018068\|Ga0184636_1202055	Not Available	704	Open in IMG/M
3300018070\|Ga0184631_10000172	All Organisms → cellular organisms → Bacteria	13102	Open in IMG/M
3300018074\|Ga0184640_10104768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1234	Open in IMG/M
3300018075\|Ga0184632_10265135	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	748	Open in IMG/M
3300018075\|Ga0184632_10299623	Not Available	696	Open in IMG/M
3300018077\|Ga0184633_10120011	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1361	Open in IMG/M
3300018077\|Ga0184633_10127798	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1316	Open in IMG/M
3300018077\|Ga0184633_10193928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1050	Open in IMG/M
3300018078\|Ga0184612_10048777	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	2204	Open in IMG/M
3300018078\|Ga0184612_10116756	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300018078\|Ga0184612_10292397	Not Available	836	Open in IMG/M
3300018078\|Ga0184612_10332587	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300018078\|Ga0184612_10528351	Not Available	571	Open in IMG/M
3300018079\|Ga0184627_10374458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	743	Open in IMG/M
3300018079\|Ga0184627_10423344	Not Available	693	Open in IMG/M
3300018082\|Ga0184639_10044901	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	2274	Open in IMG/M
3300018084\|Ga0184629_10630356	Not Available	545	Open in IMG/M
3300019249\|Ga0184648_1091051	Not Available	608	Open in IMG/M
3300019249\|Ga0184648_1091051	Not Available	608	Open in IMG/M
3300019259\|Ga0184646_1597550	Not Available	670	Open in IMG/M
3300019458\|Ga0187892_10030124	All Organisms → cellular organisms → Bacteria	4472	Open in IMG/M
3300020063\|Ga0180118_1150591	Not Available	571	Open in IMG/M
3300020063\|Ga0180118_1255422	Not Available	709	Open in IMG/M
3300020063\|Ga0180118_1255422	Not Available	709	Open in IMG/M
3300020063\|Ga0180118_1269488	Not Available	669	Open in IMG/M
3300020063\|Ga0180118_1269488	Not Available	669	Open in IMG/M
3300020063\|Ga0180118_1280795	Not Available	500	Open in IMG/M
3300020063\|Ga0180118_1280795	Not Available	500	Open in IMG/M
3300020063\|Ga0180118_1280795	Not Available	500	Open in IMG/M
3300020067\|Ga0180109_1074966	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	985	Open in IMG/M
3300020067\|Ga0180109_1275682	Not Available	551	Open in IMG/M
3300021090\|Ga0210377_10003741	All Organisms → cellular organisms → Bacteria	13002	Open in IMG/M
3300021090\|Ga0210377_10705115	Not Available	555	Open in IMG/M
3300025159\|Ga0209619_10313636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	832	Open in IMG/M
3300025174\|Ga0209324_10770461	Not Available	538	Open in IMG/M
3300025174\|Ga0209324_10792521	Not Available	526	Open in IMG/M
3300025313\|Ga0209431_10031405	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	4102	Open in IMG/M
3300025313\|Ga0209431_10031405	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	4102	Open in IMG/M
3300025313\|Ga0209431_10031405	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	4102	Open in IMG/M
3300025313\|Ga0209431_10031405	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	4102	Open in IMG/M
3300025313\|Ga0209431_10093600	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	2360	Open in IMG/M
3300025313\|Ga0209431_10093600	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	2360	Open in IMG/M
3300025313\|Ga0209431_10191062	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1619	Open in IMG/M
3300025313\|Ga0209431_10191062	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1619	Open in IMG/M
3300025313\|Ga0209431_10660252	Not Available	777	Open in IMG/M
3300025313\|Ga0209431_10923363	Not Available	624	Open in IMG/M
3300025319\|Ga0209520_10224944	Not Available	1172	Open in IMG/M
3300025322\|Ga0209641_10543717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	817	Open in IMG/M
3300025325\|Ga0209341_10016926	All Organisms → cellular organisms → Bacteria	6282	Open in IMG/M
3300025325\|Ga0209341_10016926	All Organisms → cellular organisms → Bacteria	6282	Open in IMG/M
3300025325\|Ga0209341_10045511	All Organisms → cellular organisms → Bacteria	3733	Open in IMG/M
3300025325\|Ga0209341_10334807	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1240	Open in IMG/M
3300025325\|Ga0209341_10334807	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1240	Open in IMG/M
3300025325\|Ga0209341_10336750	Not Available	1235	Open in IMG/M
3300025325\|Ga0209341_10467490	Not Available	1011	Open in IMG/M
3300025325\|Ga0209341_10467490	Not Available	1011	Open in IMG/M
3300025325\|Ga0209341_11007582	Not Available	611	Open in IMG/M
3300025326\|Ga0209342_10631793	Not Available	868	Open in IMG/M
3300025326\|Ga0209342_11372647	Not Available	506	Open in IMG/M
3300025327\|Ga0209751_10059530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	3321	Open in IMG/M
3300025327\|Ga0209751_10065396	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	3158	Open in IMG/M
3300025327\|Ga0209751_10173597	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1854	Open in IMG/M
3300025327\|Ga0209751_10250823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1503	Open in IMG/M
3300025327\|Ga0209751_10250823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1503	Open in IMG/M
3300025327\|Ga0209751_10270484	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1439	Open in IMG/M
3300025327\|Ga0209751_10270484	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1439	Open in IMG/M
3300025327\|Ga0209751_10535896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	951	Open in IMG/M
3300031949\|Ga0214473_10141270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2803	Open in IMG/M
3300031949\|Ga0214473_10549609	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300031949\|Ga0214473_10757898	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300031949\|Ga0214473_10835871	Not Available	989	Open in IMG/M
3300031949\|Ga0214473_10898198	Not Available	945	Open in IMG/M
3300031949\|Ga0214473_10898198	Not Available	945	Open in IMG/M
3300031965\|Ga0326597_11363510	Not Available	689	Open in IMG/M
3300031965\|Ga0326597_11363510	Not Available	689	Open in IMG/M
3300033233\|Ga0334722_10344019	Not Available	1082	Open in IMG/M
3300033811\|Ga0364924_005463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	2245	Open in IMG/M
3300033813\|Ga0364928_0123398	Not Available	623	Open in IMG/M
3300033813\|Ga0364928_0123398	Not Available	623	Open in IMG/M
3300033814\|Ga0364930_0012818	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	2784	Open in IMG/M
3300034164\|Ga0364940_0111238	Not Available	776	Open in IMG/M
3300034165\|Ga0364942_0215121	Not Available	627	Open in IMG/M
3300034177\|Ga0364932_0038068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1806	Open in IMG/M
3300034177\|Ga0364932_0346299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	560	Open in IMG/M
3300034178\|Ga0364934_0153492	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	872	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.90%
Terrestrial	Environmental → Terrestrial	41.10%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	46.58%
Soil	Environmental → Terrestrial → Soil	33.56%
Freshwater	Environmental → Aquatic → Freshwater	12.33%
Floodplain	Environmental → Terrestrial → Floodplain	6.16%
Cave	Environmental → Terrestrial → Cave	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	46.58%
Loam	Environmental → Terrestrial → Soil → Loam	24.66%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	6.16%
Lake	Environmental → Aquatic → Freshwater → Lake	2.05%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	46.58%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	24.66%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.27%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	6.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.79%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	4.11%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.05%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.37%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	28.08%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	24.66%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	18.49%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	10.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	6.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.37%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.68%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.68%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300002503	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012675	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT333_2	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300027964	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeq	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26616_100864813	3300002120	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGAPSPPP*
C687J26616_101875162	3300002120	Soil	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAALITGTDG*
C687J29651_100962933	3300002407	Soil	VDSEDKQSDLSSPTPKAPYQRPELKRVGKLRDVTAQKTGIRPPGDTGDQ*
C687J29651_102350412	3300002407	Soil	SRRSELMDPNDKQPDLSSPNPKAPYQRPELKRVGKLRDVTAQKTGNDTELG*
C687J29651_102902211	3300002407	Soil	MDPKDKQPELSSLSPKAPYQRPELKRIGTLRDVTAQKTGNDLASD*
C687J35164_100731742	3300002503	Soil	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGLDGAN*
Ga0136847_115294171	3300010391	Freshwater Sediment	MKPQDKRPEIADPEPKAPYQRPELKRLGTLRDLTAALLTGSDESPL*
Ga0136847_135914911	3300010391	Freshwater Sediment	MKPQDQQAESAEPKPKAPYQRPELKRAGTLRDVTAQTTFGPPPICSP*
Ga0137338_10021195	3300012174	Soil	MKPQDEQAESAEPKPKAPYQRPELKRAGTLRDVTAQATFAPPPIVE*
Ga0137338_11234742	3300012174	Soil	MNPQEKRPEIADPKPRAPYQRPELKRVGTLRDVTAQATGMDESSL*
Ga0137337_10029593	3300012675	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTLIVVD*
Ga0137337_10270742	3300012675	Soil	MEPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGTDN*
Ga0180066_10001927	3300014873	Soil	MDPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGSDN*
Ga0180066_10001928	3300014873	Soil	CDLMDPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGSDGAD*
Ga0180066_10617231	3300014873	Soil	MKPQDTQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLSPA*
Ga0180066_11137031	3300014873	Soil	MKPQDKQAKSAEPKPKAPYQRPELKRVGTLRDVTAQSTFSPPVPSP*
Ga0180074_10015074	3300014877	Soil	MKPQDEQAESAEPKPKAPYQRPELKRAGTLRDVTAQATLPICP*
Ga0180074_11583031	3300014877	Soil	YDRMKPQDEQAESAEPKPKAPYQRPELKRAGTLRDVTAQATFAPPPIVE*
Ga0180094_10475191	3300014881	Soil	MNPQEKRPEIADPKPRAPYQRPALKRVGTLRDVTAQATGMDESSL*
Ga0180094_10775312	3300014881	Soil	MKPQDEQAESAEPKPKAPYQRPELKRAGTLRDVTAQATFA
Ga0180069_10019002	3300014882	Soil	MDPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGTDN*
Ga0180069_10483361	3300014882	Soil	MKPQDQQPERAEPKPKAPYQRPKLERIGTLRDVTAQAT
Ga0180069_10485993	3300014882	Soil	MEPQDTQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLAPA*
Ga0180104_10011662	3300014884	Soil	MDPKDTQPELSSANPKAPYQRPELKRVGKLRDVTAQKRGLGPPGDDGQ*
Ga0180104_10011663	3300014884	Soil	MDPKDTQPELSSANPKAPYQRPELKRVGKLRDVTAQKTGLKPPGDAGDG*
Ga0180104_10038842	3300014884	Soil	MKPQDEQAESAEPKPKAPYQRPKLERIGTLRDVTAQSTFPVCP*
Ga0180104_10089852	3300014884	Soil	MKPQDKQPEIADPKLKAPYQRPELKRVGTLRDLTAALLSGSDESSQ*
Ga0180063_10207613	3300014885	Soil	MKPQDKQPEIADPKPKAPYQRPELKRVGTLRDLTAALLSGSDESSQ*
Ga0180089_10213263	3300015254	Soil	MKPQDKRPEIADPKPKAPYQRPELKRLGTLRDLTAALLTGSDESSM*
Ga0180089_10512131	3300015254	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQK
Ga0180073_10034175	3300015256	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLAPA*
Ga0180073_10075013	3300015256	Soil	MDPKDTQPELSSANPKAPYQRPELKRVGKLRDVTAQKTGTDDQ*
Ga0180073_10430092	3300015256	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTDFAPSSPPG*
Ga0180085_10154203	3300015259	Soil	MKPQDEQAESAEPKPKAPYQRPELKRAGTLRDVTAQATFAPAPIVE*
Ga0180085_11121091	3300015259	Soil	MKPQDKHADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLAPA*
Ga0184634_100619592	3300018031	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQGVSPRG
Ga0184634_101022052	3300018031	Groundwater Sediment	MKPQDKHTDIADPKQKAPYQRPELKRVGTLRDVTAQRSGKIALP
Ga0184638_10181101	3300018052	Groundwater Sediment	PVVGGGYDRMKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQRSDKIALP
Ga0184638_10375191	3300018052	Groundwater Sediment	PVVGGGYDRMKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLAPS
Ga0184638_10452462	3300018052	Groundwater Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGGDS
Ga0184626_100657923	3300018053	Groundwater Sediment	VDSKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGGDLAPE
Ga0184626_100657924	3300018053	Groundwater Sediment	MDPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQRTGGDG
Ga0184626_102234863	3300018053	Groundwater Sediment	VVGGGYDRMKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLAPT
Ga0184626_102541871	3300018053	Groundwater Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGLDRG
Ga0184626_102897322	3300018053	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQRSEKIALP
Ga0184616_100260823	3300018055	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLSPA
Ga0184615_100064173	3300018059	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTLIVVD
Ga0184615_100064178	3300018059	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLAPA
Ga0184615_100211961	3300018059	Groundwater Sediment	KQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGSDGMSPT
Ga0184615_105290551	3300018059	Groundwater Sediment	MEPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGTDN
Ga0184637_100968741	3300018063	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGGTIGP
Ga0184637_102237073	3300018063	Groundwater Sediment	MKPQDEQVEGAEPKPKAPYQRPELKRVGTLRDVTAQTTPVVCPR
Ga0184637_103319513	3300018063	Groundwater Sediment	MKPQDKHTDIADPRPKAPYQRPELKRVGTLRDVTAQNSDKIALPSPPQ
Ga0184637_104934131	3300018063	Groundwater Sediment	KQADIADPKPKAPYQRPELKRVGTLRDVTAQRSEKIALPSPPS
Ga0184637_105149941	3300018063	Groundwater Sediment	MKPQDKQAESAEPKPKAPYQRPELKRVGTLRDVTAQNSEKIALPSPAQ
Ga0184637_106734412	3300018063	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNTIGGVE
Ga0184636_100041912	3300018068	Groundwater Sediment	MKPQDTQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLSPA
Ga0184636_10042572	3300018068	Groundwater Sediment	MDPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGSDN
Ga0184636_10042573	3300018068	Groundwater Sediment	MDPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGSDGMSPT
Ga0184636_12020551	3300018068	Groundwater Sediment	MKPQDEQAESAEPKPKAPYQRPELKRAGTLRDVTAQATFAPPPIVE
Ga0184631_1000017213	3300018070	Groundwater Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGTDN
Ga0184640_101047682	3300018074	Groundwater Sediment	MSRPRKEVHLMDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGTDG
Ga0184632_102651352	3300018075	Groundwater Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTA
Ga0184632_102996232	3300018075	Groundwater Sediment	DPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGGDS
Ga0184633_101200112	3300018077	Groundwater Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGGDLVLE
Ga0184633_101277982	3300018077	Groundwater Sediment	MKPEEQRDDIAPPKPKAPYQRPELKKVGRLRDVTAQASPGDAGDG
Ga0184633_101939282	3300018077	Groundwater Sediment	MDPKAKQPERSNLNPKAPYQRPELKRVGKLRDVTAQRTGGDLVPE
Ga0184612_100487774	3300018078	Groundwater Sediment	VDPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQRTG
Ga0184612_101167563	3300018078	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGNDLAPT
Ga0184612_102923971	3300018078	Groundwater Sediment	DRMKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQRSDKIALP
Ga0184612_103325871	3300018078	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQRSEKIALPSPPS
Ga0184612_105283511	3300018078	Groundwater Sediment	KDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGGDS
Ga0184627_103744582	3300018079	Groundwater Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGGDA
Ga0184627_104233441	3300018079	Groundwater Sediment	KDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGGDAQ
Ga0184639_100449011	3300018082	Groundwater Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGCDLVPE
Ga0184629_106303561	3300018084	Groundwater Sediment	MKPQDTQADIADPKPKAPYQRPELKRVGTLRDVTAQKTEIVPR
Ga0184648_10910511	3300019249	Groundwater Sediment	QPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGLGPPGDDGQ
Ga0184648_10910512	3300019249	Groundwater Sediment	MDSKDTHPELSSPNPKAAYERPELKRVGKLRDVTAQKTGLKPPGDAGDG
Ga0184646_15975501	3300019259	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQRSDKIALP
Ga0187892_100301241	3300019458	Bio-Ooze	MKPQSEQLKASDEKPKAPYQRPELKRAGKLRDITAVNGSV
Ga0187893_100040574	3300019487	Microbial Mat On Rocks	MKPEDQQAECVDPKPKAPYQRPKLTRVGTLRDVTAALSEAPSPSG
Ga0180118_11505911	3300020063	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTVIRVE
Ga0180118_12554221	3300020063	Groundwater Sediment	VDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGTDS
Ga0180118_12554222	3300020063	Groundwater Sediment	PRRSGLMDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGLDES
Ga0180118_12694881	3300020063	Groundwater Sediment	MDPKDTQPELSSANPKAPYQRPELKRVGKLRDVTAQKTGLKPPGDAGDG
Ga0180118_12694882	3300020063	Groundwater Sediment	MDPKDTQPELSSANPKAPYQRPELKRVGKLRDVTAQKTGLGPPGDDGQ
Ga0180118_12807951	3300020063	Groundwater Sediment	LMDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGLDGAD
Ga0180118_12807952	3300020063	Groundwater Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGFDAGSG
Ga0180118_12807953	3300020063	Groundwater Sediment	VYPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQK
Ga0180109_10749662	3300020067	Groundwater Sediment	MNPQEKRPEIADPKPRAPYQRPELKRVGTLRDVTAQATGMDESSL
Ga0180109_12756821	3300020067	Groundwater Sediment	MKPQDQQAESAEPKPKAPYQRPELKRAGTLRDVTAQATPPVMVA
Ga0210377_1000374113	3300021090	Groundwater Sediment	MDPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGTDGAE
Ga0210377_107051151	3300021090	Groundwater Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTVIVVD
Ga0209619_103136361	3300025159	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAGKTEIVTQPPA
Ga0209324_107704611	3300025174	Soil	MKPQDKQADIADPKPKAPYQRPELKRAGTLRDVTAQATPPVMVA
Ga0209324_107925211	3300025174	Soil	MDSKDKQPEPSSPNTKVPYQRPELKRVGRLRDVTAQQKTGGTDN
Ga0209431_100314052	3300025313	Soil	VDSEDKQSDLSSPTPKAPYQRPELKRVGKLRDVTAQKTGIRPPGDTGDQ
Ga0209431_100314053	3300025313	Soil	MDSKDKQPELSSPNPKVPYQRPELKRVGTLRDVTAQKTGTDQM
Ga0209431_100314054	3300025313	Soil	MDPKDKQPELSSLSPKAPYQRPELKRIGTLRDVTAQKTGNDLASD
Ga0209431_100314056	3300025313	Soil	MKPQDTQADIADPKPKAPYQRPELKRIGTLRDVTAQKTLIGPEQ
Ga0209431_100936004	3300025313	Soil	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTARTTGFDTDSG
Ga0209431_100936005	3300025313	Soil	MDPNDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGSDEAN
Ga0209431_101910623	3300025313	Soil	MDPNDKQPDLSSPNPKAPYQRPELKRVGKLRDVTAQKTGNDTELG
Ga0209431_101910624	3300025313	Soil	MDPNDKQPELFSPNPKAPYQRPELKRVGKLRDVTAQKTG
Ga0209431_106602521	3300025313	Soil	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAALKTGTDG
Ga0209431_109233633	3300025313	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTGAPSPPP
Ga0209520_102249441	3300025319	Soil	MDSKDKQPEPSSPNTKVPYQRPELKRVGRLRDVTAQQKTGGMDN
Ga0209641_105437172	3300025322	Soil	MDPKDKQPELSSPNLKAPYQRPALKRIGTLRDVTAQKTGNDAAPM
Ga0209341_1001692610	3300025325	Soil	VDSEDKQPELSSPNPKVPYQRPELKRVGTLRDVTAQKTGTDQM
Ga0209341_100169267	3300025325	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTEIVPR
Ga0209341_100455114	3300025325	Soil	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAALITGTDG
Ga0209341_103348072	3300025325	Soil	MDPNDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGLDGAN
Ga0209341_103348074	3300025325	Soil	MDPNDKQPELFSPNPKAPYQRPELKRVGKLRDVTAQKTGFDTD
Ga0209341_103367501	3300025325	Soil	MKPQDKQAESADPKPKAPYQRPELKRIGTLRDVTAQKTGNDLAPG
Ga0209341_104674901	3300025325	Soil	MDPKDKHPELSSPNPKAPYQRPELKRVGTLRDVTAQK
Ga0209341_104674902	3300025325	Soil	MDPKDKQPELSSPNPKAPYQRPELKRVGTLRDVTAQKTGRKPSPDN
Ga0209341_110075821	3300025325	Soil	MEPQDKHAESVDPKPKAPYQRPKLERVGTLRDVTAQASPSAPSG
Ga0209342_106317931	3300025326	Soil	MDPKDTQPELSSPSPKAAYERPELKRVGTLRDVTAQKTGTDRS
Ga0209342_113726471	3300025326	Soil	VDPNDKQPELSSPNPKAPYQRPELKRVGKLRDVTAASKTGTDGIPT
Ga0209751_100595303	3300025327	Soil	MKPQDTQADIADPKPRAPYQRPELKRIGTLRDVTAQKTLIGPE
Ga0209751_100653962	3300025327	Soil	MDPNDKQPELFSPNPKAPYQRPELKRVGKLRDVTAQKTGFDTDSG
Ga0209751_101735973	3300025327	Soil	MDPNDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGSDE
Ga0209751_102508231	3300025327	Soil	MDPKDKHPELSSPNPKAPYQRPELKRVGTLRDVTAQKTGTDRM
Ga0209751_102508232	3300025327	Soil	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTGRKPSPDN
Ga0209751_102704842	3300025327	Soil	MDPKDTQPELSSPNLKAPYQRPELKRVGKLRDVTAQKTGLDTDPG
Ga0209751_102704843	3300025327	Soil	VDSKDKQPELSSPNLKAPYQRPALKRIGTLRDVTAQKTGNDAAPM
Ga0209751_105358963	3300025327	Soil	MKPQDKRPEIADPKPKAPYQRPELKRVGTLRDVTAGLPSPDN
Ga0256864_10441683	3300027964	Soil	MKPQDKQPEIADPKPKAPYQRPELKRVGTLRDLTAALLSGSDESSQ
Ga0214473_101412704	3300031949	Soil	MKPQDQQAESAEPKPKAPYQRPELKRAGTLRDVTAQATPPVMVVA
Ga0214473_105496091	3300031949	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTEFAPTFPGPS
Ga0214473_107578983	3300031949	Soil	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTEFAPPSPGPPQG
Ga0214473_108358713	3300031949	Soil	MKSQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTVIVVD
Ga0214473_108981981	3300031949	Soil	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGGDLAPE
Ga0214473_108981982	3300031949	Soil	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGSDAS
Ga0326597_113635101	3300031965	Soil	CDRMESQDKRDEIADPKPKAPYQRPELKRVGSLRDVTALASGPTVDD
Ga0326597_113635102	3300031965	Soil	MQPQDRRTEIAEPKAKAPYTRPELKRVGTLRDVTAQASGPSMDGT
Ga0334722_103440192	3300033233	Sediment	MKSQDKQDESADPKLKAPYQRPELKRVGTLRDVTAQVAASTDS
Ga0364924_005463_1_144	3300033811	Sediment	PKDTQPELSSANPKAPYQRPELKRVGKLRDVTAQKTGLKPPGDAGDG
Ga0364928_0123398_198_338	3300033813	Sediment	MEPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGSDGMSPT
Ga0364928_0123398_456_593	3300033813	Sediment	MDPKDTQPELSSANPKAPYQRPELKRVGTLRDVTAQKTGNDAAPA
Ga0364930_0012818_814_942	3300033814	Sediment	MDPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGTDN
Ga0364940_0111238_391_519	3300034164	Sediment	MEPKDKQPELSSLNPKAPYQRPELKRVGKLRDVTAQKTGSDN
Ga0364942_0215121_151_294	3300034165	Sediment	MKPQDKQADIADPKPKAPYQRPELKRVGTLRDVTAQKTDFAPSSPPG
Ga0364932_0038068_1680_1805	3300034177	Sediment	DSKDKQLELSSLNPKAPYQRPELKRVGKLRDVTAQKTGTDN
Ga0364932_0346299_1_117	3300034177	Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQKTG
Ga0364934_0153492_570_701	3300034178	Sediment	MDPKDKQPELSSPNPKAPYQRPELKRVGKLRDVTAQRTGLDEM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049983

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences